data_4N9
# 
_chem_comp.id                                    4N9 
_chem_comp.name                                  "1-[(4-cyanobenzyl)carbamothioyl]-L-proline" 
_chem_comp.type                                  "L-peptide COOH carboxy terminus" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C14 H15 N3 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               PRO 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-04-20 
_chem_comp.pdbx_modified_date                    2016-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        289.353 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4N9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4Z1T 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4N9 C   C   C 0 1 N N N -22.621 5.230  18.143 4.151  -0.369 0.671  C   4N9 1  
4N9 N1  N1  N 0 1 N N N -31.492 12.225 17.995 -7.379 1.023  0.524  N1  4N9 2  
4N9 N   N   N 0 1 N N N -24.370 6.954  18.577 2.141  0.670  -0.233 N   4N9 3  
4N9 C3  C2  C 0 1 N N N -27.650 7.046  20.030 -0.991 -1.247 -0.415 C3  4N9 4  
4N9 C4  C3  C 0 1 Y N N -28.414 8.222  19.572 -2.398 -0.748 -0.208 C4  4N9 5  
4N9 C5  C4  C 0 1 Y N N -27.897 9.143  18.623 -2.955 -0.762 1.058  C5  4N9 6  
4N9 C6  C5  C 0 1 Y N N -28.763 10.162 18.247 -4.242 -0.306 1.255  C6  4N9 7  
4N9 C7  C6  C 0 1 Y N N -30.055 10.327 18.787 -4.983 0.171  0.172  C7  4N9 8  
4N9 C8  C7  C 0 1 Y N N -30.505 9.452  19.717 -4.414 0.183  -1.104 C8  4N9 9  
4N9 C10 C8  C 0 1 N N N -30.799 11.322 18.371 -6.319 0.646  0.368  C10 4N9 10 
4N9 C9  C9  C 0 1 Y N N -29.659 8.417  20.137 -3.125 -0.271 -1.285 C9  4N9 11 
4N9 N2  N3  N 0 1 N N N -26.246 7.060  19.752 -0.049 -0.138 -0.247 N2  4N9 12 
4N9 C1  C10 C 0 1 N N N -25.592 6.590  18.640 1.274  -0.350 -0.387 C1  4N9 13 
4N9 S1  S1  S 0 1 N N N -26.328 5.686  17.405 1.855  -1.917 -0.761 S1  4N9 14 
4N9 CA  C11 C 0 1 N N S -23.332 6.394  17.630 3.602  0.581  -0.363 CA  4N9 15 
4N9 CB  C12 C 0 1 N N N -22.197 7.339  17.549 4.171  1.996  -0.130 CB  4N9 16 
4N9 CG  C13 C 0 1 N N N -22.661 8.615  18.229 2.959  2.913  -0.441 CG  4N9 17 
4N9 CD  C14 C 0 1 N N N -23.715 8.117  19.148 1.779  2.063  0.088  CD  4N9 18 
4N9 O   O1  O 0 1 N N N -22.498 4.959  19.366 3.488  -0.658 1.638  O   4N9 19 
4N9 H2  H2  H 0 1 N N N -27.776 6.967  21.120 -0.771 -2.025 0.316  H2  4N9 20 
4N9 H3  H3  H 0 1 N N N -28.080 6.157  19.546 -0.895 -1.656 -1.421 H3  4N9 21 
4N9 H4  H4  H 0 1 N N N -26.898 9.057  18.221 -2.381 -1.132 1.895  H4  4N9 22 
4N9 H5  H5  H 0 1 N N N -28.428 10.867 17.500 -4.675 -0.319 2.244  H5  4N9 23 
4N9 H6  H6  H 0 1 N N N -31.499 9.550  20.128 -4.982 0.551  -1.946 H6  4N9 24 
4N9 H7  H7  H 0 1 N N N -29.989 7.754  20.923 -2.682 -0.258 -2.270 H7  4N9 25 
4N9 H8  H8  H 0 1 N N N -25.666 7.465  20.459 -0.378 0.750  -0.036 H8  4N9 26 
4N9 HA  HA  H 0 1 N N N -23.767 6.202  16.638 3.865  0.233  -1.362 HA  4N9 27 
4N9 HB2 HB2 H 0 1 N N N -21.319 6.927  18.069 4.491  2.118  0.905  HB2 4N9 28 
4N9 HB1 HB1 H 0 1 N N N -21.941 7.538  16.498 4.994  2.199  -0.815 HB1 4N9 29 
4N9 HG2 HG2 H 0 1 N N N -21.840 9.092  18.785 3.035  3.857  0.098  HG2 4N9 30 
4N9 HG1 HG1 H 0 1 N N N -23.073 9.328  17.500 2.863  3.084  -1.513 HG1 4N9 31 
4N9 HD2 HD2 H 0 1 N N N -23.258 7.841  20.110 0.854  2.341  -0.417 HD2 4N9 32 
4N9 HD1 HD1 H 0 1 N N N -24.460 8.910  19.310 1.677  2.190  1.166  HD1 4N9 33 
4N9 OXT OXT O 0 1 N Y N -22.417 4.194  17.327 5.375  -0.897 0.514  OXT 4N9 34 
4N9 HXT H1  H 0 1 N Y N -22.211 3.422  17.840 5.683  -1.504 1.201  HXT 4N9 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4N9 S1  C1  DOUB N N 1  
4N9 CB  CA  SING N N 2  
4N9 CB  CG  SING N N 3  
4N9 CA  C   SING N N 4  
4N9 CA  N   SING N N 5  
4N9 N1  C10 TRIP N N 6  
4N9 C   O   DOUB N N 7  
4N9 CG  CD  SING N N 8  
4N9 C6  C5  DOUB Y N 9  
4N9 C6  C7  SING Y N 10 
4N9 C10 C7  SING N N 11 
4N9 N   C1  SING N N 12 
4N9 N   CD  SING N N 13 
4N9 C5  C4  SING Y N 14 
4N9 C1  N2  SING N N 15 
4N9 C7  C8  DOUB Y N 16 
4N9 C4  C3  SING N N 17 
4N9 C4  C9  DOUB Y N 18 
4N9 C8  C9  SING Y N 19 
4N9 N2  C3  SING N N 20 
4N9 C3  H2  SING N N 21 
4N9 C3  H3  SING N N 22 
4N9 C5  H4  SING N N 23 
4N9 C6  H5  SING N N 24 
4N9 C8  H6  SING N N 25 
4N9 C9  H7  SING N N 26 
4N9 N2  H8  SING N N 27 
4N9 CA  HA  SING N N 28 
4N9 CB  HB2 SING N N 29 
4N9 CB  HB1 SING N N 30 
4N9 CG  HG2 SING N N 31 
4N9 CG  HG1 SING N N 32 
4N9 CD  HD2 SING N N 33 
4N9 CD  HD1 SING N N 34 
4N9 C   OXT SING N N 35 
4N9 OXT HXT SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4N9 SMILES           ACDLabs              12.01 "C(=O)(O)C2N(C(NCc1ccc(cc1)C#N)=S)CCC2"                                                                                           
4N9 InChI            InChI                1.03  "InChI=1S/C14H15N3O2S/c15-8-10-3-5-11(6-4-10)9-16-14(20)17-7-1-2-12(17)13(18)19/h3-6,12H,1-2,7,9H2,(H,16,20)(H,18,19)/t12-/m0/s1" 
4N9 InChIKey         InChI                1.03  JNEKVVJVCJLOEF-LBPRGKRZSA-N                                                                                                       
4N9 SMILES_CANONICAL CACTVS               3.385 "OC(=O)[C@@H]1CCCN1C(=S)NCc2ccc(cc2)C#N"                                                                                          
4N9 SMILES           CACTVS               3.385 "OC(=O)[CH]1CCCN1C(=S)NCc2ccc(cc2)C#N"                                                                                            
4N9 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1CNC(=S)N2CCC[C@H]2C(=O)O)C#N"                                                                                           
4N9 SMILES           "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1CNC(=S)N2CCCC2C(=O)O)C#N"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
4N9 "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(4-cyanobenzyl)carbamothioyl]-L-proline"                               
4N9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-1-[(4-cyanophenyl)methylcarbamothioyl]pyrrolidine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4N9 "Create component" 2015-04-20 RCSB 
4N9 "Initial release"  2016-09-28 RCSB 
# 
