data_CMC
# 
_chem_comp.id                                    CMC 
_chem_comp.name                                  "CARBOXYMETHYL COENZYME *A" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAC 
_chem_comp.formula                               "C23 H38 N7 O18 P3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2011-10-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        825.570 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CMC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2CSC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CMC N1A  N1A    N 0 1 Y N N 19.419 -7.993  13.211 -5.176  7.348  0.938  N1A  CMC 1  
CMC C2A  C2A    C 0 1 Y N N 19.053 -8.686  14.331 -5.977  6.490  1.542  C2A  CMC 2  
CMC N3A  N3A    N 0 1 Y N N 18.245 -9.715  14.370 -5.904  5.191  1.338  N3A  CMC 3  
CMC C4A  C4A    C 0 1 Y N N 17.884 -10.127 13.157 -5.004  4.686  0.501  C4A  CMC 4  
CMC C5A  C5A    C 0 1 Y N N 18.276 -9.604  11.925 -4.128  5.558  -0.167 C5A  CMC 5  
CMC C6A  C6A    C 0 1 Y N N 19.105 -8.403  11.957 -4.245  6.936  0.083  C6A  CMC 6  
CMC N6A  N6A    N 0 1 N N N 19.654 -7.843  10.901 -3.410  7.843  -0.545 N6A  CMC 7  
CMC N7A  N7A    N 0 1 Y N N 17.818 -10.338 10.883 -3.325  4.796  -0.948 N7A  CMC 8  
CMC C8A  C8A    C 0 1 Y N N 17.153 -11.340 11.430 -3.644  3.543  -0.804 C8A  CMC 9  
CMC N9A  N9A    N 0 1 Y N N 17.151 -11.263 12.834 -4.675  3.423  0.079  N9A  CMC 10 
CMC C1B  "C1'A" C 0 1 N N R 16.215 -11.985 13.756 -5.314  2.174  0.501  C1B  CMC 11 
CMC C2B  "C2'A" C 0 1 N N R 14.785 -11.788 13.329 -6.575  1.890  -0.353 C2B  CMC 12 
CMC O2B  "O2'A" O 0 1 N N N 14.385 -10.516 13.824 -7.721  2.546  0.195  O2B  CMC 13 
CMC C3B  "C3'A" C 0 1 N N S 14.151 -12.893 14.150 -6.709  0.353  -0.234 C3B  CMC 14 
CMC O3B  "O3'A" O 0 1 N N N 14.105 -12.523 15.469 -7.662  0.010  0.775  O3B  CMC 15 
CMC P3B  "P3'A" P 0 1 N N N 12.653 -12.939 16.213 -8.976  -0.872 0.477  P3B  CMC 16 
CMC O7A  O7A    O 0 1 N N N 11.391 -12.205 15.552 -8.578  -2.151 -0.152 O7A  CMC 17 
CMC O8A  O8A    O 0 1 N N N 12.675 -12.437 17.733 -9.747  -1.170 1.858  O8A  CMC 18 
CMC O9A  O9A    O 0 1 N N N 12.551 -14.527 16.082 -9.950  -0.065 -0.518 O9A  CMC 19 
CMC C4B  "C4'A" C 0 1 N N R 15.084 -14.074 13.827 -5.300  -0.119 0.174  C4B  CMC 20 
CMC O4B  "O4'A" O 0 1 N N N 16.396 -13.419 13.547 -4.458  1.045  0.223  O4B  CMC 21 
CMC C5B  "C5'A" C 0 1 N N N 14.782 -14.975 12.615 -4.762  -1.107 -0.862 C5B  CMC 22 
CMC O5B  "O5'A" O 0 1 N N N 14.471 -14.060 11.532 -3.507  -1.627 -0.418 O5B  CMC 23 
CMC P1A  P1A    P 0 1 N N N 14.902 -14.343 10.008 -2.652  -2.698 -1.264 P1A  CMC 24 
CMC O1A  O1A    O 0 1 N N N 14.088 -15.442 9.383  -2.411  -2.171 -2.626 O1A  CMC 25 
CMC O2A  O2A    O 0 1 N N N 16.414 -14.459 9.910  -3.470  -4.081 -1.361 O2A  CMC 26 
CMC O3A  O3A    O 0 1 N N N 14.415 -13.012 9.316  -1.242  -2.958 -0.531 O3A  CMC 27 
CMC P2A  P2A    P 0 1 N N N 13.043 -12.554 8.558  0.175   -3.550 -1.013 P2A  CMC 28 
CMC O4A  O4A    O 0 1 N N N 12.898 -13.305 7.235  -0.051  -4.696 -1.921 O4A  CMC 29 
CMC O5A  O5A    O 0 1 N N N 11.764 -12.685 9.394  0.999   -2.405 -1.788 O5A  CMC 30 
CMC O6A  O6A    O 0 1 N N N 13.378 -10.971 8.293  1.016   -4.040 0.270  O6A  CMC 31 
CMC CBP  C11P   C 0 1 N N N 14.731 -9.167  7.654  2.796   -5.033 1.569  CBP  CMC 32 
CMC CCP  C12P   C 0 1 N N N 14.328 -10.572 7.275  2.274   -4.709 0.167  CCP  CMC 33 
CMC CDP  C13P   C 0 1 N N N 15.393 -8.375  6.509  2.971   -3.735 2.360  CDP  CMC 34 
CMC CEP  C14P   C 0 1 N N N 13.380 -8.513  8.024  1.795   -5.938 2.289  CEP  CMC 35 
CMC CAP  C10P   C 0 1 N N R 15.682 -9.302  8.883  4.144   -5.749 1.458  CAP  CMC 36 
CMC OAP  O10P   O 0 1 N N N 16.916 -9.910  8.491  3.957   -7.022 0.837  OAP  CMC 37 
CMC C9P  C9P    C 0 1 N N N 15.982 -7.928  9.485  5.087   -4.918 0.627  C9P  CMC 38 
CMC O9P  O9P    O 0 1 N N N 15.111 -7.353  10.315 5.438   -5.309 -0.466 O9P  CMC 39 
CMC N8P  N8P    N 0 1 N N N 16.959 -7.261  8.905  5.542   -3.740 1.099  N8P  CMC 40 
CMC C7P  C7P    C 0 1 N N N 17.321 -5.915  9.332  6.381   -2.887 0.254  C7P  CMC 41 
CMC C6P  C6P    C 0 1 N N N 16.583 -4.860  8.475  6.758   -1.620 1.023  C6P  CMC 42 
CMC C5P  C5P    C 0 1 N N N 17.173 -4.826  7.080  7.622   -0.742 0.154  C5P  CMC 43 
CMC O5P  O5P    O 0 1 N N N 18.432 -4.778  6.874  7.907   -1.096 -0.971 O5P  CMC 44 
CMC N4P  N4P    N 0 1 N N N 16.294 -4.854  6.111  8.076   0.435  0.626  N4P  CMC 45 
CMC C3P  C3P    C 0 1 N N N 16.659 -4.834  4.625  8.915   1.288  -0.220 C3P  CMC 46 
CMC C2P  C2P    C 0 1 N N N 16.435 -6.217  3.979  9.292   2.556  0.549  C2P  CMC 47 
CMC S1P  S1P    S 0 1 N N N 16.866 -6.367  2.242  10.332  3.612  -0.497 S1P  CMC 48 
CMC C1   C1     C 0 1 N N N 16.926 -4.777  1.429  10.669  5.039  0.571  C1   CMC 49 
CMC C2   C2     C 0 1 N N N 15.714 -3.904  1.679  11.537  6.025  -0.168 C2   CMC 50 
CMC O21  O21    O 0 1 N N N 15.780 -2.589  1.691  11.891  5.789  -1.299 O21  CMC 51 
CMC O22  O22    O 0 1 N Y N 14.662 -4.513  1.721  11.916  7.165  0.430  O22  CMC 52 
CMC H2A  H2A    H 0 1 N N N 19.469 -8.354  15.271 -6.720  6.867  2.229  H2A  CMC 53 
CMC H61A H61A   H 0 0 N N N 20.286 -7.126  11.194 -3.500  8.792  -0.364 H61A CMC 54 
CMC H62A H62A   H 0 0 N N N 20.154 -8.534  10.379 -2.734  7.530  -1.167 H62A CMC 55 
CMC H8A  H8A    H 0 1 N N N 16.669 -12.124 10.867 -3.163  2.719  -1.311 H8A  CMC 56 
CMC H1B  "H1'A" H 0 1 N N N 16.412 -11.623 14.776 -5.569  2.213  1.560  H1B  CMC 57 
CMC H2B  "H2'A" H 0 1 N N N 14.556 -11.819 12.254 -6.418  2.188  -1.390 H2B  CMC 58 
CMC HO2A HO2A   H 0 0 N N N 13.483 -10.349 13.576 -7.645  3.510  0.225  HO2A CMC 59 
CMC H3B  "H3'A" H 0 1 N N N 13.102 -13.138 13.927 -6.996  -0.081 -1.192 H3B  CMC 60 
CMC HOA8 HOA8   H 0 0 N N N 11.953 -11.838 17.880 -10.550 -1.698 1.755  HOA8 CMC 61 
CMC HOA9 HOA9   H 0 0 N N N 11.748 -14.757 15.629 -10.251 0.786  -0.170 HOA9 CMC 62 
CMC H4B  "H4'A" H 0 1 N N N 14.999 -14.765 14.678 -5.337  -0.591 1.156  H4B  CMC 63 
CMC H51A H51A   H 0 0 N N N 15.651 -15.601 12.364 -5.471  -1.926 -0.986 H51A CMC 64 
CMC H52A H52A   H 0 0 N N N 13.932 -15.642 12.823 -4.627  -0.597 -1.816 H52A CMC 65 
CMC HOA2 HOA2   H 0 0 N N N 16.641 -15.254 9.442  -3.665  -4.484 -0.504 HOA2 CMC 66 
CMC HOA5 HOA5   H 0 0 N N N 11.129 -13.211 8.922  1.184   -1.622 -1.252 HOA5 CMC 67 
CMC H121 H121   H 0 0 N N N 15.199 -11.243 7.262  2.149   -5.633 -0.397 H121 CMC 68 
CMC H122 H122   H 0 0 N N N 13.870 -10.596 6.275  2.987   -4.064 -0.346 H122 CMC 69 
CMC H131 H131   H 0 0 N N N 15.656 -7.367  6.863  1.996   -3.283 2.537  H131 CMC 70 
CMC H132 H132   H 0 0 N N N 16.304 -8.897  6.181  3.449   -3.954 3.315  H132 CMC 71 
CMC H133 H133   H 0 0 N N N 14.692 -8.296  5.665  3.594   -3.044 1.792  H133 CMC 72 
CMC H141 H141   H 0 0 N N N 13.548 -7.468  8.323  1.715   -6.887 1.758  H141 CMC 73 
CMC H142 H142   H 0 0 N N N 12.708 -8.542  7.154  2.137   -6.119 3.308  H142 CMC 74 
CMC H143 H143   H 0 0 N N N 12.923 -9.064  8.859  0.819   -5.453 2.314  H143 CMC 75 
CMC H10  H10    H 0 1 N N N 15.178 -9.930  9.633  4.563   -5.889 2.454  H10  CMC 76 
CMC HO1  HO1    H 0 1 N N N 17.486 -9.987  9.247  3.585   -6.974 -0.055 HO1  CMC 77 
CMC HN8  HN8    H 0 1 N N N 17.464 -7.688  8.155  5.313   -3.457 1.998  HN8  CMC 78 
CMC H71  H71    H 0 1 N N N 17.040 -5.783  10.387 7.287   -3.428 -0.022 H71  CMC 79 
CMC H72  H72    H 0 1 N N N 18.406 -5.779  9.216  5.832   -2.615 -0.647 H72  CMC 80 
CMC H61  H61    H 0 1 N N N 15.516 -5.122  8.413  5.852   -1.079 1.299  H61  CMC 81 
CMC H62  H62    H 0 1 N N N 16.693 -3.870  8.941  7.308   -1.891 1.924  H62  CMC 82 
CMC HN4  HN4    H 0 1 N N N 15.325 -4.891  6.356  7.847   0.719  1.525  HN4  CMC 83 
CMC H31  H31    H 0 1 N N N 16.027 -4.094  4.112  9.821   0.748  -0.495 H31  CMC 84 
CMC H32  H32    H 0 1 N N N 17.719 -4.559  4.522  8.366   1.560  -1.121 H32  CMC 85 
CMC H21  H21    H 0 1 N N N 17.054 -6.939  4.532  8.387   3.096  0.825  H21  CMC 86 
CMC H22  H22    H 0 1 N N N 15.364 -6.449  4.070  9.842   2.284  1.451  H22  CMC 87 
CMC H11  H11    H 0 1 N N N 17.812 -4.241  1.800  9.729   5.517  0.846  H11  CMC 88 
CMC H12  H12    H 0 1 N N N 16.998 -4.954  0.346  11.184  4.705  1.471  H12  CMC 89 
CMC HO22 HO22   H 0 0 N Y N 13.940 -3.897  1.762  12.472  7.767  -0.083 HO22 CMC 90 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CMC N1A C2A  SING Y N 1  
CMC N1A C6A  DOUB Y N 2  
CMC C2A N3A  DOUB Y N 3  
CMC C2A H2A  SING N N 4  
CMC N3A C4A  SING Y N 5  
CMC C4A C5A  DOUB Y N 6  
CMC C4A N9A  SING Y N 7  
CMC C5A C6A  SING Y N 8  
CMC C5A N7A  SING Y N 9  
CMC C6A N6A  SING N N 10 
CMC N6A H61A SING N N 11 
CMC N6A H62A SING N N 12 
CMC N7A C8A  DOUB Y N 13 
CMC C8A N9A  SING Y N 14 
CMC C8A H8A  SING N N 15 
CMC N9A C1B  SING N N 16 
CMC C1B C2B  SING N N 17 
CMC C1B O4B  SING N N 18 
CMC C1B H1B  SING N N 19 
CMC C2B O2B  SING N N 20 
CMC C2B C3B  SING N N 21 
CMC C2B H2B  SING N N 22 
CMC O2B HO2A SING N N 23 
CMC C3B O3B  SING N N 24 
CMC C3B C4B  SING N N 25 
CMC C3B H3B  SING N N 26 
CMC O3B P3B  SING N N 27 
CMC P3B O7A  DOUB N N 28 
CMC P3B O8A  SING N N 29 
CMC P3B O9A  SING N N 30 
CMC O8A HOA8 SING N N 31 
CMC O9A HOA9 SING N N 32 
CMC C4B O4B  SING N N 33 
CMC C4B C5B  SING N N 34 
CMC C4B H4B  SING N N 35 
CMC C5B O5B  SING N N 36 
CMC C5B H51A SING N N 37 
CMC C5B H52A SING N N 38 
CMC O5B P1A  SING N N 39 
CMC P1A O1A  DOUB N N 40 
CMC P1A O2A  SING N N 41 
CMC P1A O3A  SING N N 42 
CMC O2A HOA2 SING N N 43 
CMC O3A P2A  SING N N 44 
CMC P2A O4A  DOUB N N 45 
CMC P2A O5A  SING N N 46 
CMC P2A O6A  SING N N 47 
CMC O5A HOA5 SING N N 48 
CMC O6A CCP  SING N N 49 
CMC CBP CCP  SING N N 50 
CMC CBP CDP  SING N N 51 
CMC CBP CEP  SING N N 52 
CMC CBP CAP  SING N N 53 
CMC CCP H121 SING N N 54 
CMC CCP H122 SING N N 55 
CMC CDP H131 SING N N 56 
CMC CDP H132 SING N N 57 
CMC CDP H133 SING N N 58 
CMC CEP H141 SING N N 59 
CMC CEP H142 SING N N 60 
CMC CEP H143 SING N N 61 
CMC CAP OAP  SING N N 62 
CMC CAP C9P  SING N N 63 
CMC CAP H10  SING N N 64 
CMC OAP HO1  SING N N 65 
CMC C9P O9P  DOUB N N 66 
CMC C9P N8P  SING N N 67 
CMC N8P C7P  SING N N 68 
CMC N8P HN8  SING N N 69 
CMC C7P C6P  SING N N 70 
CMC C7P H71  SING N N 71 
CMC C7P H72  SING N N 72 
CMC C6P C5P  SING N N 73 
CMC C6P H61  SING N N 74 
CMC C6P H62  SING N N 75 
CMC C5P O5P  DOUB N N 76 
CMC C5P N4P  SING N N 77 
CMC N4P C3P  SING N N 78 
CMC N4P HN4  SING N N 79 
CMC C3P C2P  SING N N 80 
CMC C3P H31  SING N N 81 
CMC C3P H32  SING N N 82 
CMC C2P S1P  SING N N 83 
CMC C2P H21  SING N N 84 
CMC C2P H22  SING N N 85 
CMC S1P C1   SING N N 86 
CMC C1  C2   SING N N 87 
CMC C1  H11  SING N N 88 
CMC C1  H12  SING N N 89 
CMC C2  O21  DOUB N N 90 
CMC C2  O22  SING N N 91 
CMC O22 HO22 SING N N 92 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CMC SMILES           ACDLabs              12.01 "O=C(O)CSCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O" 
CMC InChI            InChI                1.03  
;InChI=1S/C23H38N7O18P3S/c1-23(2,18(35)21(36)26-4-3-13(31)25-5-6-52-8-14(32)33)9-45-51(42,43)48-50(40,41)44-7-12-17(47-49(37,38)39)16(34)22(46-12)30-11-29-15-19(24)27-10-28-20(15)30/h10-12,16-18,22,34-35H,3-9H2,1-2H3,(H,25,31)(H,26,36)(H,32,33)(H,40,41)(H,42,43)(H2,24,27,28)(H2,37,38,39)/t12-,16-,17-,18+,22-/m1/s1
;
CMC InChIKey         InChI                1.03  OBUOSIHPWVNVJN-GRFIIANRSA-N 
CMC SMILES_CANONICAL CACTVS               3.370 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCSCC(O)=O" 
CMC SMILES           CACTVS               3.370 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCSCC(O)=O" 
CMC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CC(C)(CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSCC(=O)O)O" 
CMC SMILES           "OpenEye OEToolkits" 1.7.2 "CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCSCC(=O)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CMC "SYSTEMATIC NAME" ACDLabs              12.01 
"(3S,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-10,14-dioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphaicosan-20-oic acid 3,5-dioxide (non-preferred name)" 
CMC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 
"2-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]ethanoic acid"           
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CMC "Create component"         1999-07-08 RCSB 
CMC "Modify descriptor"        2011-06-04 RCSB 
CMC "Modify leaving atom flag" 2011-10-18 RCSB 
# 
