data_G8C
#

_chem_comp.id                                   G8C
_chem_comp.name                                 "1,2-Dioctanoyl-SN-Glycero-3-Phosphoethanolamine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H42 N O8 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-08-05
_chem_comp.pdbx_modified_date                   2021-03-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       467.534
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G8C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7CNY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G8C  P    P1   P  0  1  N  N  N  17.681  30.283   5.110    0.569   2.973  -0.154  P    G8C   1  
G8C  N    N1   N  0  1  N  N  N  20.060  26.103   6.462    3.987   2.218   2.513  N    G8C   2  
G8C  O11  O1   O  0  1  N  N  N  19.122  31.012   5.195    0.007   1.617  -0.816  O11  G8C   3  
G8C  O12  O2   O  0  1  N  N  N  16.910  30.442   6.427    1.459   3.769  -1.233  O12  G8C   4  
G8C  O13  O3   O  0  1  N  N  N  17.978  28.701   5.055    1.475   2.609   1.126  O13  G8C   5  
G8C  O14  O4   O  0  1  N  N  N  16.925  30.469   3.812   -0.567   3.822   0.271  O14  G8C   6  
G8C  C11  C1   C  0  1  N  N  N  19.052  28.258   5.874    2.033   3.599   1.992  C11  G8C   7  
G8C  C12  C2   C  0  1  N  N  N  19.086  26.753   5.635    2.834   2.914   3.101  C12  G8C   8  
G8C  C1   C3   C  0  1  N  N  N  19.769  31.502   4.030   -0.915   1.609  -1.908  C1   G8C   9  
G8C  C2   C4   C  0  1  N  N  R  19.863  33.013   3.998   -1.240   0.163  -2.290  C2   G8C  10  
G8C  C3   C5   C  0  1  N  N  N  18.590  33.749   3.598    0.058  -0.591  -2.582  C3   G8C  11  
G8C  O31  O5   O  0  1  N  N  N  18.824  35.161   3.424    0.950  -0.480  -1.441  O31  G8C  12  
G8C  O32  O6   O  0  1  N  N  N  18.947  35.003   1.160    2.429  -1.700  -2.540  O32  G8C  13  
G8C  C31  C6   C  0  1  N  N  N  18.876  35.775   2.101    2.141  -1.092  -1.536  C31  G8C  14  
G8C  C32  C7   C  0  1  N  N  N  18.877  37.299   1.888    3.118  -1.020  -0.391  C32  G8C  15  
G8C  C33  C8   C  0  1  N  N  N  18.967  37.735   0.414    4.387  -1.795  -0.755  C33  G8C  16  
G8C  O21  O7   O  0  1  N  N  N  20.239  33.445   5.284   -1.939  -0.481  -1.193  O21  G8C  17  
G8C  O22  O8   O  0  1  N  N  N  21.760  34.790   4.373   -3.848   0.198  -2.074  O22  G8C  18  
G8C  C21  C9   C  0  1  N  N  N  21.557  33.978   5.261   -3.278  -0.396  -1.190  C21  G8C  19  
G8C  C22  C10  C  0  1  N  N  N  22.596  33.541   6.271   -4.072  -1.041  -0.083  C22  G8C  20  
G8C  C23  C11  C  0  1  N  N  N  23.068  34.775   7.041   -5.564  -0.797  -0.315  C23  G8C  21  
G8C  C24  C12  C  0  1  N  N  N  24.418  35.278   6.526   -6.369  -1.452   0.809  C24  G8C  22  
G8C  C25  C13  C  0  1  N  N  N  24.508  36.800   6.433   -7.862  -1.208   0.576  C25  G8C  23  
G8C  C26  C14  C  0  1  N  N  N  25.897  37.288   6.831   -8.667  -1.863   1.700  C26  G8C  24  
G8C  C27  C15  C  0  1  N  N  N  26.042  38.801   6.678  -10.159  -1.618   1.467  C27  G8C  25  
G8C  H1   H1   H  0  1  N  N  N  20.052  25.120   6.277    4.532   1.757   3.226  H1   G8C  26  
G8C  H2   H2   H  0  1  N  N  N  20.967  26.473   6.262    3.691   1.563   1.805  H2   G8C  27  
G8C  H4   H4   H  0  1  N  N  N  16.002  30.649   6.240    2.223   3.271  -1.556  H4   G8C  28  
G8C  H5   H5   H  0  1  N  N  N  19.999  28.726   5.567    2.691   4.253   1.419  H5   G8C  29  
G8C  H6   H6   H  0  1  N  N  N  18.858  28.483   6.933    1.230   4.188   2.435  H6   G8C  30  
G8C  H7   H7   H  0  1  N  N  N  18.093  26.335   5.859    2.199   2.194   3.617  H7   G8C  31  
G8C  H8   H8   H  0  1  N  N  N  19.334  26.566   4.580    3.186   3.663   3.811  H8   G8C  32  
G8C  H9   H9   H  0  1  N  N  N  19.204  31.167   3.148   -1.831   2.122  -1.615  H9   G8C  33  
G8C  H10  H10  H  0  1  N  N  N  20.787  31.086   3.993   -0.470   2.119  -2.763  H10  G8C  34  
G8C  H11  H11  H  0  1  N  N  N  20.649  33.287   3.279   -1.872   0.156  -3.178  H11  G8C  35  
G8C  H12  H12  H  0  1  N  N  N  17.834  33.607   4.384   -0.166  -1.642  -2.767  H12  G8C  36  
G8C  H13  H13  H  0  1  N  N  N  18.218  33.330   2.651    0.539  -0.162  -3.461  H13  G8C  37  
G8C  H14  H14  H  0  1  N  N  N  19.739  37.721   2.425    3.372   0.021  -0.195  H14  G8C  38  
G8C  H15  H15  H  0  1  N  N  N  17.947  37.706   2.311    2.667  -1.459   0.499  H15  G8C  39  
G8C  H16  H16  H  0  1  N  N  N  18.369  38.605   0.106    4.133  -2.836  -0.951  H16  G8C  40  
G8C  H17  H17  H  0  1  N  N  N  19.970  37.802  -0.033    4.837  -1.356  -1.645  H17  G8C  41  
G8C  H19  H19  H  0  1  N  N  N  22.154  32.814   6.968   -3.876  -2.113  -0.073  H19  G8C  42  
G8C  H20  H20  H  0  1  N  N  N  23.448  33.079   5.751   -3.778  -0.609   0.874  H20  G8C  43  
G8C  H21  H21  H  0  1  N  N  N  22.322  35.575   6.926   -5.760   0.275  -0.325  H21  G8C  44  
G8C  H22  H22  H  0  1  N  N  N  23.166  34.516   8.105   -5.858  -1.229  -1.272  H22  G8C  45  
G8C  H23  H23  H  0  1  N  N  N  24.586  34.858   5.523   -6.174  -2.524   0.819  H23  G8C  46  
G8C  H24  H24  H  0  1  N  N  N  25.205  34.924   7.209   -6.076  -1.020   1.765  H24  G8C  47  
G8C  H25  H25  H  0  1  N  N  N  24.300  37.111   5.399   -8.057  -0.135   0.566  H25  G8C  48  
G8C  H26  H26  H  0  1  N  N  N  23.762  37.247   7.107   -8.156  -1.640  -0.381  H26  G8C  49  
G8C  H27  H27  H  0  1  N  N  N  26.080  37.019   7.882   -8.472  -2.935   1.710  H27  G8C  50  
G8C  H28  H28  H  0  1  N  N  N  26.643  36.794   6.191   -8.373  -1.431   2.657  H28  G8C  51  
G8C  H29  H29  H  0  1  N  N  N  25.873  39.517   7.496  -10.355  -0.546   1.457  H29  G8C  52  
G8C  H30  H30  H  0  1  N  N  N  26.637  39.281   5.887  -10.453  -2.050   0.510  H30  G8C  53  
G8C  C4   C16  C  0  1  N  N  N       ?       ?       ?  -10.965  -2.273   2.591  C4   G8C  54  
G8C  C5   C17  C  0  1  N  N  N       ?       ?       ?    5.379  -1.722   0.407  C5   G8C  55  
G8C  C6   C18  C  0  1  N  N  N       ?       ?       ?    6.648  -2.496   0.044  C6   G8C  56  
G8C  C7   C19  C  0  1  N  N  N       ?       ?       ?    7.640  -2.424   1.206  C7   G8C  57  
G8C  C8   C20  C  0  1  N  N  N       ?       ?       ?    8.909  -3.198   0.843  C8   G8C  58  
G8C  C9   C21  C  0  1  N  N  N       ?       ?       ?    9.901  -3.125   2.005  C9   G8C  59  
G8C  H3   H3   H  0  1  N  N  N       ?       ?       ?  -12.028  -2.099   2.425  H3   G8C  60  
G8C  H18  H18  H  0  1  N  N  N       ?       ?       ?  -10.769  -3.346   2.601  H18  G8C  61  
G8C  H31  H31  H  0  1  N  N  N       ?       ?       ?  -10.671  -1.842   3.548  H31  G8C  62  
G8C  H32  H32  H  0  1  N  N  N       ?       ?       ?    5.633  -0.680   0.604  H32  G8C  63  
G8C  H33  H33  H  0  1  N  N  N       ?       ?       ?    4.928  -2.160   1.298  H33  G8C  64  
G8C  H34  H34  H  0  1  N  N  N       ?       ?       ?    6.394  -3.538  -0.153  H34  G8C  65  
G8C  H35  H35  H  0  1  N  N  N       ?       ?       ?    7.098  -2.058  -0.846  H35  G8C  66  
G8C  H36  H36  H  0  1  N  N  N       ?       ?       ?    7.894  -1.382   1.403  H36  G8C  67  
G8C  H37  H37  H  0  1  N  N  N       ?       ?       ?    7.189  -2.862   2.097  H37  G8C  68  
G8C  H38  H38  H  0  1  N  N  N       ?       ?       ?    8.655  -4.240   0.646  H38  G8C  69  
G8C  H39  H39  H  0  1  N  N  N       ?       ?       ?    9.359  -2.760  -0.048  H39  G8C  70  
G8C  H40  H40  H  0  1  N  N  N       ?       ?       ?   10.805  -3.677   1.746  H40  G8C  71  
G8C  H41  H41  H  0  1  N  N  N       ?       ?       ?   10.155  -2.084   2.201  H41  G8C  72  
G8C  H42  H42  H  0  1  N  N  N       ?       ?       ?    9.450  -3.563   2.895  H42  G8C  73  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G8C  C33  C32  SING  N  N   1  
G8C  O32  C31  DOUB  N  N   2  
G8C  C32  C31  SING  N  N   3  
G8C  C31  O31  SING  N  N   4  
G8C  O31  C3   SING  N  N   5  
G8C  C3   C2   SING  N  N   6  
G8C  O14  P    DOUB  N  N   7  
G8C  C2   C1   SING  N  N   8  
G8C  C2   O21  SING  N  N   9  
G8C  C1   O11  SING  N  N  10  
G8C  O22  C21  DOUB  N  N  11  
G8C  O13  P    SING  N  N  12  
G8C  O13  C11  SING  N  N  13  
G8C  P    O11  SING  N  N  14  
G8C  P    O12  SING  N  N  15  
G8C  C21  O21  SING  N  N  16  
G8C  C21  C22  SING  N  N  17  
G8C  C12  C11  SING  N  N  18  
G8C  C12  N    SING  N  N  19  
G8C  C22  C23  SING  N  N  20  
G8C  C25  C24  SING  N  N  21  
G8C  C25  C26  SING  N  N  22  
G8C  C24  C23  SING  N  N  23  
G8C  C27  C26  SING  N  N  24  
G8C  N    H1   SING  N  N  25  
G8C  N    H2   SING  N  N  26  
G8C  O12  H4   SING  N  N  27  
G8C  C11  H5   SING  N  N  28  
G8C  C11  H6   SING  N  N  29  
G8C  C12  H7   SING  N  N  30  
G8C  C12  H8   SING  N  N  31  
G8C  C1   H9   SING  N  N  32  
G8C  C1   H10  SING  N  N  33  
G8C  C2   H11  SING  N  N  34  
G8C  C3   H12  SING  N  N  35  
G8C  C3   H13  SING  N  N  36  
G8C  C32  H14  SING  N  N  37  
G8C  C32  H15  SING  N  N  38  
G8C  C33  H16  SING  N  N  39  
G8C  C33  H17  SING  N  N  40  
G8C  C22  H19  SING  N  N  41  
G8C  C22  H20  SING  N  N  42  
G8C  C23  H21  SING  N  N  43  
G8C  C23  H22  SING  N  N  44  
G8C  C24  H23  SING  N  N  45  
G8C  C24  H24  SING  N  N  46  
G8C  C25  H25  SING  N  N  47  
G8C  C25  H26  SING  N  N  48  
G8C  C26  H27  SING  N  N  49  
G8C  C26  H28  SING  N  N  50  
G8C  C27  H29  SING  N  N  51  
G8C  C27  H30  SING  N  N  52  
G8C  C27  C4   SING  N  N  53  
G8C  C33  C5   SING  N  N  54  
G8C  C5   C6   SING  N  N  55  
G8C  C6   C7   SING  N  N  56  
G8C  C7   C8   SING  N  N  57  
G8C  C8   C9   SING  N  N  58  
G8C  C4   H3   SING  N  N  59  
G8C  C4   H18  SING  N  N  60  
G8C  C4   H31  SING  N  N  61  
G8C  C5   H32  SING  N  N  62  
G8C  C5   H33  SING  N  N  63  
G8C  C6   H34  SING  N  N  64  
G8C  C6   H35  SING  N  N  65  
G8C  C7   H36  SING  N  N  66  
G8C  C7   H37  SING  N  N  67  
G8C  C8   H38  SING  N  N  68  
G8C  C8   H39  SING  N  N  69  
G8C  C9   H40  SING  N  N  70  
G8C  C9   H41  SING  N  N  71  
G8C  C9   H42  SING  N  N  72  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G8C  InChI             InChI                 1.03   "InChI=1S/C21H42NO8P/c1-3-5-7-9-11-13-20(23)27-17-19(18-29-31(25,26)28-16-15-22)30-21(24)14-12-10-8-6-4-2/h19H,3-18,22H2,1-2H3,(H,25,26)/t19-/m1/s1"  
G8C  InChIKey          InChI                 1.03   UNACBKDVIYEXSL-LJQANCHMSA-N  
G8C  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCCN)OC(=O)CCCCCCC"  
G8C  SMILES            CACTVS                3.385  "CCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCCN)OC(=O)CCCCCCC"  
G8C  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCCCCC(=O)OC[C@H](COP(=O)(O)OCCN)OC(=O)CCCCCCC"  
G8C  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCC"  
#
_pdbx_chem_comp_identifier.comp_id          G8C
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(2~{R})-3-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-2-octanoyloxy-propyl] octanoate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G8C  "Create component"  2020-08-05  PDBJ  
G8C  "Initial release"   2021-03-24  RCSB  
##
