data_LED
# 
_chem_comp.id                                    LED 
_chem_comp.name                                  "(4R)-5-OXO-L-LEUCINE" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H11 N O3" 
_chem_comp.mon_nstd_parent_comp_id               LEU 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-06-07 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        145.156 
_chem_comp.one_letter_code                       L 
_chem_comp.three_letter_code                     LED 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LED N    N    N 0 1 N N N Y Y N -6.749 51.980 14.784 -0.561 1.921  2.722  N    LED 1  
LED CA   CA   C 0 1 N N S Y N N -6.871 50.659 15.444 -0.790 1.935  1.273  CA   LED 2  
LED CB   CB   C 0 1 N N N N N N -6.749 49.564 14.375 0.151  0.934  0.583  CB   LED 3  
LED CG   CG   C 0 1 N N R N N N -6.516 48.167 14.949 1.661  1.158  0.785  CG   LED 4  
LED CD1  CD1  C 0 1 N N N N N N -7.689 47.747 15.858 2.511  -0.017 0.316  CD1  LED 5  
LED CD2  CD2  C 0 1 N N N N N N -6.463 47.149 13.784 2.110  2.472  0.173  CD2  LED 6  
LED OE   OE   O 0 1 N N N N N N -5.795 47.403 12.786 1.387  3.219  -0.479 OE   LED 7  
LED C    C    C 0 1 N N N Y N Y -5.714 50.540 16.429 -2.250 1.567  1.083  C    LED 8  
LED O    O    O 0 1 N N N Y N Y -4.546 50.731 16.058 -3.009 1.240  1.987  O    LED 9  
LED OXT  OXT  O 0 1 N Y N Y N Y ?      ?      ?      -2.638 1.617  -0.217 OXT  LED 10 
LED H    HN1  H 0 1 N N N Y Y N -6.219 52.596 15.367 -1.338 2.100  3.315  HN1  LED 11 
LED H2   HN2  H 0 1 N Y N Y Y N -7.660 52.364 14.635 0.380  1.938  3.041  HN2  LED 12 
LED HA   HA   H 0 1 N N N Y N N -7.835 50.554 15.963 -0.605 2.958  0.933  HA   LED 13 
LED HBC1 HBC1 H 0 0 N N N N N N -5.872 49.811 13.758 -0.061 0.916  -0.495 HBC1 LED 14 
LED HBC2 HBC2 H 0 0 N N N N N N -7.686 49.544 13.798 -0.080 -0.074 0.955  HBC2 LED 15 
LED HG   HG   H 0 1 N N N N N N -5.578 48.184 15.524 1.827  1.279  1.864  HG   LED 16 
LED HD11 HD11 H 0 0 N N N N N N -8.092 46.783 15.514 3.110  -0.421 1.139  HD11 LED 17 
LED HD12 HD12 H 0 0 N N N N N N -8.479 48.511 15.814 1.873  -0.825 -0.060 HD12 LED 18 
LED HD13 HD13 H 0 0 N N N N N N -7.333 47.647 16.894 3.186  0.262  -0.499 HD13 LED 19 
LED HD2  HD2  H 0 1 N N N N N N -7.011 46.220 13.849 3.154  2.761  0.389  HD2  LED 20 
LED HXT  HXT  H 0 1 N Y N Y N Y 0.721  -0.074 0.614  -3.571 1.373  -0.393 HXT  LED 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LED N   CA   SING N N 1  
LED N   H    SING N N 2  
LED N   H2   SING N N 3  
LED CA  CB   SING N N 4  
LED CA  C    SING N N 5  
LED CA  HA   SING N N 6  
LED CB  CG   SING N N 7  
LED CB  HBC1 SING N N 8  
LED CB  HBC2 SING N N 9  
LED CG  CD1  SING N N 10 
LED CG  CD2  SING N N 11 
LED CG  HG   SING N N 12 
LED CD1 HD11 SING N N 13 
LED CD1 HD12 SING N N 14 
LED CD1 HD13 SING N N 15 
LED CD2 OE   DOUB N N 16 
LED CD2 HD2  SING N N 17 
LED C   O    DOUB N N 18 
LED C   OXT  SING N N 19 
LED OXT HXT  SING N N 20 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LED SMILES           ACDLabs              10.04 "O=CC(C)CC(N)C(=O)O"                                                            
LED SMILES_CANONICAL CACTVS               3.341 "C[C@H](C[C@H](N)C(O)=O)C=O"                                                    
LED SMILES           CACTVS               3.341 "C[CH](C[CH](N)C(O)=O)C=O"                                                      
LED SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H](C[C@@H](C(=O)O)N)C=O"                                                   
LED SMILES           "OpenEye OEToolkits" 1.5.0 "CC(CC(C(=O)O)N)C=O"                                                            
LED InChI            InChI                1.03  "InChI=1S/C6H11NO3/c1-4(3-8)2-5(7)6(9)10/h3-5H,2,7H2,1H3,(H,9,10)/t4-,5+/m1/s1" 
LED InChIKey         InChI                1.03  ALVALNHXAQAJAM-UHNVWZDZSA-N                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LED "SYSTEMATIC NAME" ACDLabs              10.04 "(4R)-5-oxo-L-leucine"                          
LED "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,4R)-2-amino-4-methyl-5-oxo-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LED "Create component"  2006-06-07 EBI  
LED "Modify descriptor" 2011-06-04 RCSB 
LED "Modify backbone"   2023-11-03 PDBE 
# 
