data_LXE
#

_chem_comp.id                                   LXE
_chem_comp.name                                 "[(1~{S},2~{S},3~{S},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl]azanium"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C6 H14 N O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2019-09-27
_chem_comp.pdbx_modified_date                   2020-02-21
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       148.180
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LXE
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6SXT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LXE  "C1'"   C1   C  0  1  N  N  N  -23.952  59.415  45.322   1.632   0.901   0.378  "C1'"   LXE   1  
LXE  "C2'"   C2   C  0  1  N  N  S  -25.023  58.427  44.856   1.613  -0.625   0.154  "C2'"   LXE   2  
LXE  "O2'"   O1   O  0  1  N  N  N  -26.152  58.482  45.650   2.301  -0.951  -1.056  "O2'"   LXE   3  
LXE  "C3'"   C3   C  0  1  N  N  S  -24.287  57.163  44.964   0.133  -1.035   0.045  "C3'"   LXE   4  
LXE  "O3'"   O2   O  0  1  N  N  N  -25.090  56.082  44.330  -0.195  -1.962   1.082  "O3'"   LXE   5  
LXE  "C4'"   C4   C  0  1  N  N  S  -23.057  57.471  44.137  -0.695   0.257   0.208  "C4'"   LXE   6  
LXE  "C5'"   C5   C  0  1  N  N  N  -21.870  56.594  44.490  -1.910   0.234  -0.721  "C5'"   LXE   7  
LXE  "O5'"   O3   O  0  1  N  N  N  -21.539  56.577  45.861  -2.848  -0.738  -0.255  "O5'"   LXE   8  
LXE  "C6'"   C6   C  0  1  N  N  S  -22.800  59.001  44.441   0.282   1.391  -0.204  "C6'"   LXE   9  
LXE  "N1'"   N1   N  1  1  N  N  N  -22.823  59.683  43.115  -0.116   2.667   0.404  "N1'"   LXE  10  
LXE  "H1'"   H1   H  0  1  N  N  N  -23.716  59.285  46.388   1.694   1.130   1.442  "H1'"   LXE  11  
LXE  H1      H2   H  0  1  N  N  N  -24.252  60.457  45.137   2.465   1.355  -0.158  H1      LXE  12  
LXE  "H2'"   H3   H  0  1  N  N  N  -25.266  58.631  43.803   2.080  -1.132   0.998  "H2'"   LXE  13  
LXE  HB      H4   H  0  1  N  N  N  -26.581  59.322  45.534   3.239  -0.716  -1.050  HB      LXE  14  
LXE  "H3'"   H5   H  0  1  N  N  N  -24.024  56.922  46.004  -0.060  -1.482  -0.930  "H3'"   LXE  15  
LXE  HC      H6   H  0  1  N  N  N  -25.856  55.903  44.862   0.309  -2.786   1.047  HC      LXE  16  
LXE  "H4'"   H7   H  0  1  N  N  N  -23.293  57.358  43.069  -1.010   0.382   1.243  "H4'"   LXE  17  
LXE  "H5'1"  H8   H  0  0  N  N  N  -22.100  55.564  44.180  -2.380   1.217  -0.729  "H5'1"  LXE  18  
LXE  "H5'2"  H9   H  0  0  N  N  N  -20.996  56.959  43.931  -1.591  -0.025  -1.731  "H5'2"  LXE  19  
LXE  "H5'"   H10  H  0  1  N  N  N  -20.790  56.009  45.999  -3.645  -0.807  -0.798  "H5'"   LXE  20  
LXE  "H6'"   H11  H  0  1  N  N  N  -21.835  59.135  44.951   0.337   1.479  -1.289  "H6'"   LXE  21  
LXE  "HN1'"  H12  H  0  0  N  N  N  -22.665  60.662  43.241  -0.107   2.579   1.409  "HN1'"  LXE  22  
LXE  HN11    H13  H  0  0  N  N  N  -22.106  59.302  42.532   0.531   3.389   0.124  HN11    LXE  23  
LXE  HN12    H14  H  0  0  N  N  N  -23.714  59.542  42.683  -1.046   2.911   0.096  HN12    LXE  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LXE  "N1'"  "C6'"   SING  N  N   1  
LXE  "C4'"  "C6'"   SING  N  N   2  
LXE  "C4'"  "C5'"   SING  N  N   3  
LXE  "C4'"  "C3'"   SING  N  N   4  
LXE  "O3'"  "C3'"   SING  N  N   5  
LXE  "C6'"  "C1'"   SING  N  N   6  
LXE  "C5'"  "O5'"   SING  N  N   7  
LXE  "C2'"  "C3'"   SING  N  N   8  
LXE  "C2'"  "C1'"   SING  N  N   9  
LXE  "C2'"  "O2'"   SING  N  N  10  
LXE  "C1'"  "H1'"   SING  N  N  11  
LXE  "C1'"  H1      SING  N  N  12  
LXE  "C2'"  "H2'"   SING  N  N  13  
LXE  "O2'"  HB      SING  N  N  14  
LXE  "C3'"  "H3'"   SING  N  N  15  
LXE  "O3'"  HC      SING  N  N  16  
LXE  "C4'"  "H4'"   SING  N  N  17  
LXE  "C5'"  "H5'1"  SING  N  N  18  
LXE  "C5'"  "H5'2"  SING  N  N  19  
LXE  "O5'"  "H5'"   SING  N  N  20  
LXE  "C6'"  "H6'"   SING  N  N  21  
LXE  "N1'"  "HN1'"  SING  N  N  22  
LXE  "N1'"  HN11    SING  N  N  23  
LXE  "N1'"  HN12    SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LXE  InChI             InChI                 1.03   "InChI=1S/C6H13NO3/c7-4-1-5(9)6(10)3(4)2-8/h3-6,8-10H,1-2,7H2/p+1/t3-,4+,5+,6+/m1/s1"  
LXE  InChIKey          InChI                 1.03   XJKPQBOZNVQXOP-VANKVMQKSA-O  
LXE  SMILES_CANONICAL  CACTVS                3.385  "[NH3+][C@H]1C[C@H](O)[C@@H](O)[C@@H]1CO"  
LXE  SMILES            CACTVS                3.385  "[NH3+][CH]1C[CH](O)[CH](O)[CH]1CO"  
LXE  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1[C@@H]([C@H]([C@@H]([C@H]1O)O)CO)[NH3+]"  
LXE  SMILES            "OpenEye OEToolkits"  2.0.7  "C1C(C(C(C1O)O)CO)[NH3+]"  
#
_pdbx_chem_comp_identifier.comp_id          LXE
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(1~{S},2~{S},3~{S},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl]azanium"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LXE  "Create component"  2019-09-27  EBI   
LXE  "Initial release"   2020-02-26  RCSB  
##
