data_Q8E
#

_chem_comp.id                                   Q8E
_chem_comp.name                                 "~{N}-[(6-methoxypyridin-3-yl)methyl]-2-selanyl-benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C14 H14 N2 O2 Se"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-05-26
_chem_comp.pdbx_modified_date                   2020-09-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       321.233
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Q8E
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6Z4M
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q8E  C1   C1   C   0  1  Y  N  N   1.495  -0.423   9.248   2.153  -3.221  -0.094  C1   Q8E   1  
Q8E  C2   C2   C   0  1  Y  N  N   1.860  -1.605   8.588   3.522  -3.027  -0.038  C2   Q8E   2  
Q8E  C3   C3   C   0  1  Y  N  N   1.836  -1.684   7.195   4.044  -1.747   0.016  C3   Q8E   3  
Q8E  C4   C4   C   0  1  Y  N  N   1.421  -0.623   6.376   3.202  -0.655   0.014  C4   Q8E   4  
Q8E  C5   C5   C   0  1  Y  N  N   1.050   0.619   7.125   1.820  -0.843  -0.043  C5   Q8E   5  
Q8E  C6   C6   C   0  1  N  N  N   0.608   1.796   6.319   0.912   0.324  -0.047  C6   Q8E   6  
Q8E  C7   C7   C   0  1  N  N  N   0.794   4.275   6.093  -1.322   1.294  -0.105  C7   Q8E   7  
Q8E  O    O1   O   0  1  N  N  N  -0.054   1.526   5.292   1.368   1.449   0.001  O    Q8E   8  
Q8E  SE   SE1  SE  0  0  N  N  N   1.314  -0.609   4.713   3.944   1.158   0.099  SE   Q8E   9  
Q8E  C    C8   C   0  1  Y  N  N   1.101   0.683   8.529   1.300  -2.137  -0.103  C    Q8E  10  
Q8E  N    N1   N   0  1  N  N  N   1.022   3.008   6.761  -0.422   0.139  -0.102  N    Q8E  11  
Q8E  C8   C9   C   0  1  Y  N  N   1.722   4.642   4.920  -2.751   0.818  -0.172  C8   Q8E  12  
Q8E  C10  C10  C   0  1  Y  N  N   1.899   5.991   4.629  -3.457   0.566   0.987  C10  Q8E  13  
Q8E  N1   N2   N   0  1  Y  N  N   2.708   6.392   3.637  -4.708   0.149   0.940  N1   Q8E  14  
Q8E  C11  C11  C   0  1  Y  N  N   3.364   5.485   2.836  -5.332  -0.043  -0.211  C11  Q8E  15  
Q8E  O1   O2   O   0  1  N  N  N   4.169   5.908   1.794  -6.617  -0.478  -0.213  O1   Q8E  16  
Q8E  C13  C12  C   0  1  N  N  N   4.329   7.264   1.349  -7.229  -0.701   1.059  C13  Q8E  17  
Q8E  C12  C13  C   0  1  Y  N  N   3.213   4.112   3.078  -4.683   0.191  -1.416  C12  Q8E  18  
Q8E  C9   C14  C   0  1  Y  N  N   2.375   3.682   4.115  -3.372   0.634  -1.400  C9   Q8E  19  
Q8E  H1   H1   H   0  1  N  N  N   1.523  -0.380  10.327   1.752  -4.222  -0.136  H1   Q8E  20  
Q8E  H2   H2   H   0  1  N  N  N   2.164  -2.466   9.165   4.186  -3.879  -0.035  H2   Q8E  21  
Q8E  H3   H3   H   0  1  N  N  N   2.151  -2.604   6.726   5.114  -1.603   0.061  H3   Q8E  22  
Q8E  H4   H4   H   0  1  N  N  N   0.891   5.068   6.850  -1.174   1.873   0.807  H4   Q8E  23  
Q8E  H5   H5   H   0  1  N  N  N  -0.236   4.262   5.706  -1.107   1.920  -0.971  H5   Q8E  24  
Q8E  H6   H6   H   0  1  N  N  N   1.718  -1.910   4.188   4.000   1.385   1.641  H6   Q8E  25  
Q8E  H7   H7   H   0  1  N  N  N   0.832   1.595   9.041   0.232  -2.289  -0.148  H7   Q8E  26  
Q8E  H8   H8   H   0  1  N  N  N   1.529   3.031   7.623  -0.786  -0.760  -0.140  H8   Q8E  27  
Q8E  H9   H9   H   0  1  N  N  N   1.374   6.731   5.214  -2.980   0.712   1.945  H9   Q8E  28  
Q8E  H10  H10  H   0  1  N  N  N   5.032   7.292   0.503  -8.253  -1.045   0.914  H10  Q8E  29  
Q8E  H11  H11  H   0  1  N  N  N   3.355   7.662   1.030  -6.666  -1.456   1.606  H11  Q8E  30  
Q8E  H12  H12  H   0  1  N  N  N   4.723   7.876   2.174  -7.236   0.230   1.627  H12  Q8E  31  
Q8E  H13  H13  H   0  1  N  N  N   3.739   3.391   2.469  -5.195   0.032  -2.353  H13  Q8E  32  
Q8E  H14  H14  H   0  1  N  N  N   2.230   2.627   4.297  -2.842   0.825  -2.321  H14  Q8E  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q8E  C13  O1   SING  N  N   1  
Q8E  O1   C11  SING  N  N   2  
Q8E  C11  C12  DOUB  Y  N   3  
Q8E  C11  N1   SING  Y  N   4  
Q8E  C12  C9   SING  Y  N   5  
Q8E  N1   C10  DOUB  Y  N   6  
Q8E  C9   C8   DOUB  Y  N   7  
Q8E  C10  C8   SING  Y  N   8  
Q8E  SE   C4   SING  N  N   9  
Q8E  C8   C7   SING  N  N  10  
Q8E  O    C6   DOUB  N  N  11  
Q8E  C7   N    SING  N  N  12  
Q8E  C6   N    SING  N  N  13  
Q8E  C6   C5   SING  N  N  14  
Q8E  C4   C5   DOUB  Y  N  15  
Q8E  C4   C3   SING  Y  N  16  
Q8E  C5   C    SING  Y  N  17  
Q8E  C3   C2   DOUB  Y  N  18  
Q8E  C    C1   DOUB  Y  N  19  
Q8E  C2   C1   SING  Y  N  20  
Q8E  C1   H1   SING  N  N  21  
Q8E  C2   H2   SING  N  N  22  
Q8E  C3   H3   SING  N  N  23  
Q8E  C7   H4   SING  N  N  24  
Q8E  C7   H5   SING  N  N  25  
Q8E  SE   H6   SING  N  N  26  
Q8E  C    H7   SING  N  N  27  
Q8E  N    H8   SING  N  N  28  
Q8E  C10  H9   SING  N  N  29  
Q8E  C13  H10  SING  N  N  30  
Q8E  C13  H11  SING  N  N  31  
Q8E  C13  H12  SING  N  N  32  
Q8E  C12  H13  SING  N  N  33  
Q8E  C9   H14  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q8E  InChI             InChI                 1.03   "InChI=1S/C14H14N2O2Se/c1-18-13-7-6-10(8-15-13)9-16-14(17)11-4-2-3-5-12(11)19/h2-8,19H,9H2,1H3,(H,16,17)"  
Q8E  InChIKey          InChI                 1.03   SGEBTMJCWYBJSF-UHFFFAOYSA-N  
Q8E  SMILES_CANONICAL  CACTVS                3.385  "COc1ccc(CNC(=O)c2ccccc2[SeH])cn1"  
Q8E  SMILES            CACTVS                3.385  "COc1ccc(CNC(=O)c2ccccc2[SeH])cn1"  
Q8E  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1ccc(cn1)CNC(=O)c2ccccc2[SeH]"  
Q8E  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1ccc(cn1)CNC(=O)c2ccccc2[SeH]"  
#
_pdbx_chem_comp_identifier.comp_id          Q8E
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(6-methoxypyridin-3-yl)methyl]-2-selanyl-benzamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q8E  "Create component"  2020-05-26  PDBE  
Q8E  "Initial release"   2020-09-16  RCSB  
##
