data_R6E
# 
_chem_comp.id                                    R6E 
_chem_comp.name                                  "(2~{R})-2-azanyl-2-ethyl-octanoic acid" 
_chem_comp.type                                  "D-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H21 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-05-03 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        187.279 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     R6E 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6RLZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
R6E N   N   N 0 1 N N N Y Y N -33.268 27.662 52.712 1.548  -1.391 1.240  N   R6E 1  
R6E CA  CA  C 0 1 N N R Y N N -33.175 28.706 51.698 1.594  -0.218 0.357  CA  R6E 2  
R6E C   C   C 0 1 N N N Y N Y -33.596 28.103 50.355 2.838  -0.277 -0.492 C   R6E 3  
R6E O   O   O 0 1 N N N Y N Y -34.786 28.630 49.847 2.814  0.132  -1.629 O   R6E 4  
R6E CB  CB  C 0 1 N N N N N N -34.035 29.897 52.116 0.360  -0.211 -0.547 CB  R6E 5  
R6E CB2 CB2 C 0 1 N N N N N N -31.736 29.212 51.573 1.615  1.057  1.202  CB2 R6E 6  
R6E CG  CG  C 0 1 N N N N N N -35.169 30.197 51.150 -0.903 -0.151 0.315  CG  R6E 7  
R6E CG2 CG2 C 0 1 N N N N N N -31.577 30.194 50.409 1.663  2.278  0.282  CG2 R6E 8  
R6E CD  CD  C 0 1 N N N N N N -36.371 30.803 51.853 -2.137 -0.145 -0.588 CD  R6E 9  
R6E CE  CE  C 0 1 N N N N N N -36.963 29.888 52.915 -3.400 -0.084 0.274  CE  R6E 10 
R6E CZ  CZ  C 0 1 N N N N N N -38.468 29.748 52.731 -4.635 -0.078 -0.630 CZ  R6E 11 
R6E CH  CH  C 0 1 N N N N N N -38.903 28.289 52.764 -5.897 -0.018 0.232  CH  R6E 12 
R6E H   H1  H 0 1 N N N Y Y N -32.997 28.034 53.600 1.534  -2.246 0.705  H1  R6E 13 
R6E H2  H2  H 0 1 N Y N Y Y N -34.210 27.330 52.763 2.319  -1.384 1.891  H2  R6E 14 
R6E H7  H7  H 0 1 N N N N N N -33.390 30.786 52.182 0.394  0.659  -1.202 H7  R6E 15 
R6E H8  H8  H 0 1 N N N N N N -34.468 29.684 53.105 0.345  -1.120 -1.149 H8  R6E 16 
R6E H9  H9  H 0 1 N N N N N N -31.070 28.353 51.407 0.715  1.100  1.816  H9  R6E 17 
R6E H10 H10 H 0 1 N N N N N N -31.455 29.719 52.508 2.494  1.052  1.846  H10 R6E 18 
R6E H11 H11 H 0 1 N N N N N N -35.478 29.260 50.663 -0.937 -1.021 0.971  H11 R6E 19 
R6E H12 H12 H 0 1 N N N N N N -34.809 30.905 50.389 -0.888 0.757  0.918  H12 R6E 20 
R6E H13 H13 H 0 1 N N N N N N -30.532 30.532 50.354 2.562  2.236  -0.332 H13 R6E 21 
R6E H14 H14 H 0 1 N N N N N N -31.850 29.694 49.468 0.783  2.283  -0.362 H14 R6E 22 
R6E H15 H15 H 0 1 N N N N N N -32.235 31.061 50.568 1.677  3.187  0.885  H15 R6E 23 
R6E H16 H16 H 0 1 N N N N N N -36.059 31.742 52.334 -2.103 0.726  -1.244 H16 R6E 24 
R6E H17 H17 H 0 1 N N N N N N -37.146 31.015 51.102 -2.152 -1.053 -1.191 H17 R6E 25 
R6E H18 H18 H 0 1 N N N N N N -36.496 28.895 52.836 -3.434 -0.955 0.929  H18 R6E 26 
R6E H19 H19 H 0 1 N N N N N N -36.759 30.311 53.910 -3.386 0.824  0.876  H19 R6E 27 
R6E H20 H20 H 0 1 N N N N N N -38.751 30.183 51.761 -4.601 0.793  -1.286 H20 R6E 28 
R6E H21 H21 H 0 1 N N N N N N -38.979 30.291 53.540 -4.649 -0.986 -1.232 H21 R6E 29 
R6E H22 H22 H 0 1 N N N N N N -39.993 28.228 52.628 -5.931 -0.888 0.888  H22 R6E 30 
R6E H23 H23 H 0 1 N N N N N N -38.401 27.739 51.955 -5.883 0.891  0.835  H23 R6E 31 
R6E H24 H24 H 0 1 N Y N N N N -38.629 27.847 53.733 -6.777 -0.013 -0.412 H24 R6E 32 
R6E OXT OXT O 0 1 N Y N Y N Y -32.795 27.272 49.865 3.973  -0.785 0.014  OXT R6E 33 
R6E HXT H3  H 0 1 N Y N Y N Y -33.106 26.997 49.011 4.745  -0.802 -0.569 H3  R6E 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
R6E O   C   DOUB N N 1  
R6E C   CA  SING N N 2  
R6E CG2 CB2 SING N N 3  
R6E CG  CD  SING N N 4  
R6E CG  CB  SING N N 5  
R6E CB2 CA  SING N N 6  
R6E CA  CB  SING N N 7  
R6E CA  N   SING N N 8  
R6E CD  CE  SING N N 9  
R6E CZ  CH  SING N N 10 
R6E CZ  CE  SING N N 11 
R6E N   H   SING N N 12 
R6E N   H2  SING N N 13 
R6E CB  H7  SING N N 14 
R6E CB  H8  SING N N 15 
R6E CB2 H9  SING N N 16 
R6E CB2 H10 SING N N 17 
R6E CG  H11 SING N N 18 
R6E CG  H12 SING N N 19 
R6E CG2 H13 SING N N 20 
R6E CG2 H14 SING N N 21 
R6E CG2 H15 SING N N 22 
R6E CD  H16 SING N N 23 
R6E CD  H17 SING N N 24 
R6E CE  H18 SING N N 25 
R6E CE  H19 SING N N 26 
R6E CZ  H20 SING N N 27 
R6E CZ  H21 SING N N 28 
R6E CH  H22 SING N N 29 
R6E CH  H23 SING N N 30 
R6E CH  H24 SING N N 31 
R6E C   OXT SING N N 32 
R6E OXT HXT SING N N 33 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
R6E InChI            InChI                1.03  "InChI=1S/C10H21NO2/c1-3-5-6-7-8-10(11,4-2)9(12)13/h3-8,11H2,1-2H3,(H,12,13)/t10-/m1/s1" 
R6E InChIKey         InChI                1.03  NKBJUCYPZSRVDF-SNVBAGLBSA-N                                                              
R6E SMILES_CANONICAL CACTVS               3.385 "CCCCCC[C@](N)(CC)C(O)=O"                                                                
R6E SMILES           CACTVS               3.385 "CCCCCC[C](N)(CC)C(O)=O"                                                                 
R6E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCC[C@](CC)(C(=O)O)N"                                                                
R6E SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCC(CC)(C(=O)O)N"                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           R6E 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R})-2-azanyl-2-ethyl-octanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
R6E "Create component" 2019-05-03 EBI  
R6E "Initial release"  2020-03-18 RCSB 
R6E "Modify backbone"  2023-11-03 PDBE 
# 
