data_HMF
# 
_chem_comp.id                                    HMF 
_chem_comp.name                                  "2-AMINO-4-PHENYL-BUTYRIC ACID" 
_chem_comp.type                                  "D-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H13 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         D-BETA-HOMOPHENYLALANINE 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        179.216 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HMF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1AY6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HMF N   N   N 0 1 N N N Y Y N 17.319 -16.948 23.000 -2.344 1.668  0.684  N   HMF 1  
HMF CA  CA  C 0 1 N N R Y N N 18.111 -15.809 23.640 -2.129 0.218  0.600  CA  HMF 2  
HMF C   C   C 0 1 N N N Y N Y 17.746 -14.582 22.850 -3.177 -0.395 -0.294 C   HMF 3  
HMF O   O   O 0 1 N N N Y N Y 16.602 -14.156 23.027 -3.777 0.297  -1.082 O   HMF 4  
HMF OXT OXT O 0 1 N Y N Y N Y 18.583 -14.068 22.000 -3.443 -1.708 -0.214 OXT HMF 5  
HMF CB  CB  C 0 1 N N N N N N 17.642 -16.156 25.068 -0.740 -0.060 0.023  CB  HMF 6  
HMF CG  CG  C 0 1 N N N N N N 18.682 -16.036 26.102 0.327  0.452  0.992  CG  HMF 7  
HMF C1  C1  C 0 1 Y N N N N N 20.119 -15.714 25.812 1.695  0.179  0.423  C1  HMF 8  
HMF C2  C2  C 0 1 Y N N N N N 21.020 -16.574 25.229 2.308  1.119  -0.384 C2  HMF 9  
HMF C6  C6  C 0 1 Y N N N N N 20.646 -14.479 26.143 2.340  -1.009 0.713  C6  HMF 10 
HMF C3  C3  C 0 1 Y N N N N N 22.347 -16.195 25.022 3.564  0.868  -0.906 C3  HMF 11 
HMF C5  C5  C 0 1 Y N N N N N 21.969 -14.096 25.984 3.595  -1.260 0.191  C5  HMF 12 
HMF C4  C4  C 0 1 Y N N N N N 22.813 -14.999 25.389 4.206  -0.322 -0.621 C4  HMF 13 
HMF H   HN1 H 0 1 N N N Y Y N 17.516 -17.803 23.481 -2.282 2.096  -0.228 H   HMF 14 
HMF H2  HN2 H 0 1 N Y N Y Y N 16.341 -16.749 23.061 -3.229 1.878  1.122  H2  HMF 15 
HMF HA  HA  H 0 1 N N N Y N N 19.199 -15.651 23.659 -2.202 -0.218 1.597  HA  HMF 16 
HMF HXT HXT H 0 1 N Y N Y N Y 18.174 -13.334 21.556 -4.122 -2.055 -0.808 HXT HMF 17 
HMF HB2 HB1 H 0 1 N N N N N N 16.826 -15.466 25.330 -0.614 -1.133 -0.122 HB2 HMF 18 
HMF HB3 HB2 H 0 1 N N N N N N 17.293 -17.199 25.063 -0.636 0.451  -0.935 HB3 HMF 19 
HMF HG2 HG1 H 0 1 N N N N N N 18.337 -15.223 26.758 0.201  1.525  1.137  HG2 HMF 20 
HMF HG3 HG2 H 0 1 N N N N N N 18.706 -17.019 26.594 0.223  -0.058 1.949  HG3 HMF 21 
HMF HC2 H2  H 0 1 N N N N N N 20.695 -17.559 24.926 1.806  2.049  -0.608 HC2 HMF 22 
HMF H6  H6  H 0 1 N N N N N N 19.968 -13.750 26.562 1.863  -1.741 1.348  H6  HMF 23 
HMF H3  H3  H 0 1 N N N N N N 23.021 -16.894 24.548 4.042  1.602  -1.538 H3  HMF 24 
HMF H5  H5  H 0 1 N N N N N N 22.320 -13.129 26.314 4.099  -2.188 0.418  H5  HMF 25 
HMF H4  H4  H 0 1 N N N N N N 23.848 -14.744 25.218 5.187  -0.518 -1.029 H4  HMF 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HMF N   CA  SING N N 1  
HMF N   H   SING N N 2  
HMF N   H2  SING N N 3  
HMF CA  C   SING N N 4  
HMF CA  CB  SING N N 5  
HMF CA  HA  SING N N 6  
HMF C   O   DOUB N N 7  
HMF C   OXT SING N N 8  
HMF OXT HXT SING N N 9  
HMF CB  CG  SING N N 10 
HMF CB  HB2 SING N N 11 
HMF CB  HB3 SING N N 12 
HMF CG  C1  SING N N 13 
HMF CG  HG2 SING N N 14 
HMF CG  HG3 SING N N 15 
HMF C1  C2  DOUB Y N 16 
HMF C1  C6  SING Y N 17 
HMF C2  C3  SING Y N 18 
HMF C2  HC2 SING N N 19 
HMF C6  C5  DOUB Y N 20 
HMF C6  H6  SING N N 21 
HMF C3  C4  DOUB Y N 22 
HMF C3  H3  SING N N 23 
HMF C5  C4  SING Y N 24 
HMF C5  H5  SING N N 25 
HMF C4  H4  SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HMF SMILES           ACDLabs              12.01 "O=C(O)C(N)CCc1ccccc1"                                                                     
HMF SMILES_CANONICAL CACTVS               3.370 "N[C@H](CCc1ccccc1)C(O)=O"                                                                 
HMF SMILES           CACTVS               3.370 "N[CH](CCc1ccccc1)C(O)=O"                                                                  
HMF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)CC[C@H](C(=O)O)N"                                                               
HMF SMILES           "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)CCC(C(=O)O)N"                                                                   
HMF InChI            InChI                1.03  "InChI=1S/C10H13NO2/c11-9(10(12)13)7-6-8-4-2-1-3-5-8/h1-5,9H,6-7,11H2,(H,12,13)/t9-/m1/s1" 
HMF InChIKey         InChI                1.03  JTTHKOPSMAVJFE-SECBINFHSA-N                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HMF "SYSTEMATIC NAME" ACDLabs              12.01 "(2R)-2-amino-4-phenylbutanoic acid"   
HMF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-azanyl-4-phenyl-butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HMF "Create component"    1999-07-08 RCSB 
HMF "Modify linking type" 2011-03-23 RCSB 
HMF "Modify descriptor"   2011-06-04 RCSB 
HMF "Modify synonyms"     2020-06-05 PDBE 
HMF "Modify backbone"     2023-11-03 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      HMF 
_pdbx_chem_comp_synonyms.name         D-BETA-HOMOPHENYLALANINE 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
