data_KMF
# 
_chem_comp.id                                    KMF 
_chem_comp.name                                  "N-[2-(4-acetylpiperazin-1-yl)ethyl]naphthalene-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H23 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-14 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        325.405 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KMF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GB1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KMF N1  N1  N 0 1 N N N N N N 7.347  -3.752 24.105 2.962  0.502  0.502  N1  KMF 1  
KMF C4  C1  C 0 1 N N N N N N 6.990  -3.625 25.524 1.655  1.105  0.210  C4  KMF 2  
KMF C5  C2  C 0 1 N N N N N N 8.040  -4.231 26.451 0.553  0.067  0.437  C5  KMF 3  
KMF C6  C3  C 0 1 N N N N N N 9.963  -2.711 26.384 -1.875 -0.064 0.277  C6  KMF 4  
KMF C7  C4  C 0 1 Y N N N N N 11.393 -2.543 25.954 -3.187 0.541  -0.016 C7  KMF 5  
KMF C8  C5  C 0 1 Y N N N N N 12.385 -3.020 26.781 -3.294 1.894  -0.312 C8  KMF 6  
KMF C10 C6  C 0 1 Y N N N N N 14.088 -2.359 25.243 -5.676 1.725  -0.580 C10 KMF 7  
KMF C13 C7  C 0 1 Y N N N N N 12.514 -0.887 22.218 -6.742 -1.754 -0.005 C13 KMF 8  
KMF C15 C8  C 0 1 Y N N N N N 10.785 -1.467 23.760 -4.364 -1.641 0.279  C15 KMF 9  
KMF C17 C9  C 0 1 N N N N N N 7.269  -2.467 23.391 4.018  1.522  0.526  C17 KMF 10 
KMF N   N2  N 0 1 N N N N N N 7.140  -3.713 21.275 5.614  -0.286 0.170  N   KMF 11 
KMF N2  N3  N 0 1 N N N N N N 9.394  -3.873 26.048 -0.751 0.669  0.146  N2  KMF 12 
KMF C1  C10 C 0 1 N N N N N N 6.628  -3.640 20.021 6.819  -0.439 -0.415 C1  KMF 13 
KMF C18 C11 C 0 1 N N N N N N 7.824  -2.617 21.979 5.327  0.887  1.009  C18 KMF 14 
KMF C11 C12 C 0 1 Y N N N N N 13.119 -1.850 24.350 -5.642 0.350  -0.294 C11 KMF 15 
KMF O1  O1  O 0 1 N N N N N N 5.814  -4.462 19.633 7.682  0.396  -0.253 O1  KMF 16 
KMF C2  C13 C 0 1 N N N N N N 7.060  -4.981 22.018 4.553  -1.287 -0.014 C2  KMF 17 
KMF C16 C14 C 0 1 Y N N N N N 11.739 -1.937 24.702 -4.402 -0.271 -0.007 C16 KMF 18 
KMF C9  C15 C 0 1 Y N N N N N 13.718 -2.932 26.420 -4.531 2.461  -0.588 C9  KMF 19 
KMF C12 C16 C 0 1 Y N N N N N 13.474 -1.306 23.093 -6.815 -0.424 -0.287 C12 KMF 20 
KMF C14 C17 C 0 1 Y N N N N N 11.174 -0.968 22.550 -5.521 -2.362 0.278  C14 KMF 21 
KMF C   C18 C 0 1 N N N N N N 7.131  -2.566 19.107 7.092  -1.649 -1.271 C   KMF 22 
KMF O   O2  O 0 1 N N N N N N 9.371  -1.841 27.019 -1.807 -1.223 0.638  O   KMF 23 
KMF C3  C19 C 0 1 N N N N N N 6.515  -4.740 23.413 3.275  -0.567 -0.456 C3  KMF 24 
KMF H2  H2  H 0 1 N N N N N N 6.881  -2.557 25.766 1.492  1.957  0.869  H2  KMF 25 
KMF H3  H3  H 0 1 N N N N N N 6.032  -4.139 25.693 1.632  1.438  -0.828 H3  KMF 26 
KMF H4  H4  H 0 1 N N N N N N 7.865  -3.865 27.473 0.715  -0.785 -0.222 H4  KMF 27 
KMF H5  H5  H 0 1 N N N N N N 7.941  -5.326 26.432 0.576  -0.266 1.474  H5  KMF 28 
KMF H6  H6  H 0 1 N N N N N N 12.119 -3.470 27.726 -2.407 2.510  -0.327 H6  KMF 29 
KMF H7  H7  H 0 1 N N N N N N 15.135 -2.292 24.988 -6.620 2.203  -0.801 H7  KMF 30 
KMF H8  H8  H 0 1 N N N N N N 12.804 -0.488 21.257 -7.645 -2.347 0.000  H8  KMF 31 
KMF H9  H9  H 0 1 N N N N N N 9.734  -1.505 24.005 -3.423 -2.124 0.500  H9  KMF 32 
KMF H10 H10 H 0 1 N N N N N N 7.857  -1.713 23.935 4.159  1.925  -0.477 H10 KMF 33 
KMF H11 H11 H 0 1 N N N N N N 6.219  -2.144 23.337 3.732  2.326  1.204  H11 KMF 34 
KMF H12 H12 H 0 1 N N N N N N 9.919  -4.523 25.498 -0.805 1.593  -0.142 H12 KMF 35 
KMF H13 H13 H 0 1 N N N N N N 8.900  -2.837 22.034 6.139  1.609  0.921  H13 KMF 36 
KMF H14 H14 H 0 1 N N N N N N 7.669  -1.678 21.427 5.221  0.577  2.049  H14 KMF 37 
KMF H15 H15 H 0 1 N N N N N N 6.394  -5.674 21.483 4.853  -2.003 -0.778 H15 KMF 38 
KMF H16 H16 H 0 1 N N N N N N 8.065  -5.422 22.092 4.372  -1.807 0.928  H16 KMF 39 
KMF H17 H17 H 0 1 N N N N N N 14.476 -3.324 27.082 -4.587 3.516  -0.812 H17 KMF 40 
KMF H18 H18 H 0 1 N N N N N N 14.516 -1.221 22.823 -7.769 0.033  -0.505 H18 KMF 41 
KMF H19 H19 H 0 1 N N N N N N 10.428 -0.633 21.845 -5.490 -3.418 0.498  H19 KMF 42 
KMF H20 H20 H 0 1 N N N N N N 6.657  -2.672 18.120 6.389  -1.671 -2.104 H20 KMF 43 
KMF H21 H21 H 0 1 N N N N N N 6.884  -1.580 19.529 8.111  -1.600 -1.656 H21 KMF 44 
KMF H22 H22 H 0 1 N N N N N N 8.222  -2.656 19.001 6.973  -2.552 -0.672 H22 KMF 45 
KMF H23 H23 H 0 1 N N N N N N 5.484  -4.364 23.343 2.450  -1.278 -0.491 H23 KMF 46 
KMF H24 H24 H 0 1 N N N N N N 6.524  -5.684 23.977 3.425  -0.135 -1.446 H24 KMF 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KMF C   C1  SING N N 1  
KMF O1  C1  DOUB N N 2  
KMF C1  N   SING N N 3  
KMF N   C18 SING N N 4  
KMF N   C2  SING N N 5  
KMF C18 C17 SING N N 6  
KMF C2  C3  SING N N 7  
KMF C13 C14 DOUB Y N 8  
KMF C13 C12 SING Y N 9  
KMF C14 C15 SING Y N 10 
KMF C12 C11 DOUB Y N 11 
KMF C17 N1  SING N N 12 
KMF C3  N1  SING N N 13 
KMF C15 C16 DOUB Y N 14 
KMF N1  C4  SING N N 15 
KMF C11 C16 SING Y N 16 
KMF C11 C10 SING Y N 17 
KMF C16 C7  SING Y N 18 
KMF C10 C9  DOUB Y N 19 
KMF C4  C5  SING N N 20 
KMF C7  C6  SING N N 21 
KMF C7  C8  DOUB Y N 22 
KMF N2  C6  SING N N 23 
KMF N2  C5  SING N N 24 
KMF C6  O   DOUB N N 25 
KMF C9  C8  SING Y N 26 
KMF C4  H2  SING N N 27 
KMF C4  H3  SING N N 28 
KMF C5  H4  SING N N 29 
KMF C5  H5  SING N N 30 
KMF C8  H6  SING N N 31 
KMF C10 H7  SING N N 32 
KMF C13 H8  SING N N 33 
KMF C15 H9  SING N N 34 
KMF C17 H10 SING N N 35 
KMF C17 H11 SING N N 36 
KMF N2  H12 SING N N 37 
KMF C18 H13 SING N N 38 
KMF C18 H14 SING N N 39 
KMF C2  H15 SING N N 40 
KMF C2  H16 SING N N 41 
KMF C9  H17 SING N N 42 
KMF C12 H18 SING N N 43 
KMF C14 H19 SING N N 44 
KMF C   H20 SING N N 45 
KMF C   H21 SING N N 46 
KMF C   H22 SING N N 47 
KMF C3  H23 SING N N 48 
KMF C3  H24 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KMF SMILES           ACDLabs              12.01 "CC(=O)N1CCN(CCNC(=O)c2cccc3ccccc32)CC1"                                                                                  
KMF InChI            InChI                1.06  "InChI=1S/C19H23N3O2/c1-15(23)22-13-11-21(12-14-22)10-9-20-19(24)18-8-4-6-16-5-2-3-7-17(16)18/h2-8H,9-14H2,1H3,(H,20,24)" 
KMF InChIKey         InChI                1.06  FZEKPYMSMRNNKF-UHFFFAOYSA-N                                                                                               
KMF SMILES_CANONICAL CACTVS               3.385 "CC(=O)N1CCN(CCNC(=O)c2cccc3ccccc23)CC1"                                                                                  
KMF SMILES           CACTVS               3.385 "CC(=O)N1CCN(CCNC(=O)c2cccc3ccccc23)CC1"                                                                                  
KMF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)CCNC(=O)c2cccc3c2cccc3"                                                                                  
KMF SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)CCNC(=O)c2cccc3c2cccc3"                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KMF "SYSTEMATIC NAME" ACDLabs              12.01 "N-[2-(4-acetylpiperazin-1-yl)ethyl]naphthalene-1-carboxamide"      
KMF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[2-(4-ethanoylpiperazin-1-yl)ethyl]naphthalene-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KMF "Create component" 2023-08-14 RCSB 
KMF "Initial release"  2023-11-08 RCSB 
# 
