data_LYH
# 
_chem_comp.id                                    LYH 
_chem_comp.name                                  "3,4 ENE-LYSINE" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H12 N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(2S,3E)-2,6-DIAMINOHEX-3-ENOIC ACID" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-03-14 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        144.172 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LYH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2ZCY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LYH N   N   N 0 1 N N N Y Y N 61.754 -135.451 37.686 2.159  1.805  0.142  N   LYH 1  
LYH CA  CA  C 0 1 N N S Y N N 61.563 -135.408 39.130 1.423  0.573  0.453  CA  LYH 2  
LYH C   C   C 0 1 N N N Y N Y 62.715 -135.979 39.923 2.210  -0.618 -0.030 C   LYH 3  
LYH O   O   O 0 1 N N N Y N Y 63.711 -136.440 39.362 3.064  -0.476 -0.873 O   LYH 4  
LYH CB  CB  C 0 1 N N N N N N 60.375 -136.279 39.597 0.082  0.601  -0.235 CB  LYH 5  
LYH CG  CG  C 0 1 N N N N N N 60.484 -137.626 39.644 -1.018 0.639  0.475  CG  LYH 6  
LYH CD  CD  C 0 1 N N N N N N 59.451 -138.604 40.134 -2.358 0.668  -0.213 CD  LYH 7  
LYH CE  CE  C 0 1 N N N N N N 60.056 -139.468 41.298 -3.221 -0.486 0.303  CE  LYH 8  
LYH NZ  NZ  N 0 1 N N N N N N 59.962 -138.779 42.599 -4.528 -0.457 -0.368 NZ  LYH 9  
LYH OXT OXT O 0 1 N Y N Y N Y 62.534 -135.898 41.256 1.962  -1.837 0.475  OXT LYH 10 
LYH HXT HXT H 0 1 N Y N Y N Y 63.295 -136.252 41.701 2.492  -2.570 0.134  HXT LYH 11 
LYH H   H   H 0 1 N N N Y Y N 60.955 -135.058 37.232 3.034  1.839  0.643  H   LYH 12 
LYH H2  H2  H 0 1 N Y N Y Y N 62.568 -134.925 37.442 2.308  1.897  -0.851 H2  LYH 13 
LYH HA  HA  H 0 1 N N N Y N N 61.425 -134.332 39.311 1.277  0.498  1.531  HA  LYH 14 
LYH HB  HB  H 0 1 N N N N N N 59.448 -135.807 39.889 0.029  0.591  -1.314 HB  LYH 15 
LYH HG  HG  H 0 1 N N N N N N 61.414 -138.046 39.291 -0.964 0.649  1.554  HG  LYH 16 
LYH HD1 HD1 H 0 1 N N N N N N 58.573 -138.055 40.504 -2.854 1.615  -0.002 HD1 LYH 17 
LYH HD2 HD2 H 0 1 N N N N N N 59.150 -139.264 39.307 -2.217 0.563  -1.288 HD2 LYH 18 
LYH HE1 HE1 H 0 1 N N N N N N 59.500 -140.415 41.360 -2.725 -1.433 0.093  HE1 LYH 19 
LYH HE2 HE2 H 0 1 N N N N N N 61.116 -139.663 41.078 -3.363 -0.380 1.379  HE2 LYH 20 
LYH HZ1 HZ1 H 0 1 N N N N N N 60.356 -139.358 43.313 -4.420 -0.488 -1.370 HZ1 LYH 21 
LYH HZ2 HZ2 H 0 1 N N N N N N 60.464 -137.915 42.556 -5.117 -1.210 -0.044 HZ2 LYH 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LYH N   CA  SING N N 1  
LYH CA  C   SING N N 2  
LYH CA  CB  SING N N 3  
LYH C   O   DOUB N N 4  
LYH C   OXT SING N N 5  
LYH CB  CG  DOUB N N 6  
LYH CG  CD  SING N N 7  
LYH CD  CE  SING N N 8  
LYH CE  NZ  SING N E 9  
LYH N   H   SING N N 10 
LYH N   H2  SING N N 11 
LYH CA  HA  SING N N 12 
LYH CB  HB  SING N N 13 
LYH CG  HG  SING N N 14 
LYH CD  HD1 SING N N 15 
LYH CD  HD2 SING N N 16 
LYH CE  HE1 SING N N 17 
LYH CE  HE2 SING N N 18 
LYH NZ  HZ1 SING N N 19 
LYH NZ  HZ2 SING N N 20 
LYH OXT HXT SING N N 21 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LYH SMILES           ACDLabs              12.01 "O=C(O)C(/C=C/CCN)N"                                                                  
LYH SMILES_CANONICAL CACTVS               3.370 "NCC/C=C/[C@H](N)C(O)=O"                                                              
LYH SMILES           CACTVS               3.370 "NCCC=C[CH](N)C(O)=O"                                                                 
LYH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C(CN)/C=C/[C@@H](C(=O)O)N"                                                           
LYH SMILES           "OpenEye OEToolkits" 1.7.0 "C(CN)C=CC(C(=O)O)N"                                                                  
LYH InChI            InChI                1.03  "InChI=1S/C6H12N2O2/c7-4-2-1-3-5(8)6(9)10/h1,3,5H,2,4,7-8H2,(H,9,10)/b3-1+/t5-/m0/s1" 
LYH InChIKey         InChI                1.03  BLKNAFAMNSXQRW-JRIXXDKMSA-N                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LYH "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,3E)-2,6-diaminohex-3-enoic acid"    
LYH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(E,2S)-2,6-bis(azanyl)hex-3-enoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LYH "Create component"  2011-03-14 EBI  
LYH "Modify descriptor" 2011-06-04 RCSB 
LYH "Initial release"   2012-08-24 RCSB 
LYH "Modify synonyms"   2021-03-13 RCSB 
LYH "Modify backbone"   2023-11-03 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      LYH 
_pdbx_chem_comp_synonyms.name         "(2S,3E)-2,6-DIAMINOHEX-3-ENOIC ACID" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
