data_2IJ
#

_chem_comp.id                                   2IJ
_chem_comp.name                                 "5-{(3S)-1-[(Z)-iminomethyl]piperidin-3-yl}-2-(4-phenoxyphenoxy)pyridine-3-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H24 N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-06-29
_chem_comp.pdbx_modified_date                   2021-10-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       416.472
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2IJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7R61
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2IJ  C2   C1   C  0  1  Y  N  N  19.163   5.794   3.414  -0.528   1.584  -0.073  C2   2IJ   1  
2IJ  C3   C2   C  0  1  Y  N  N  19.004   5.726   1.942  -1.638   2.342   0.328  C3   2IJ   2  
2IJ  C8   C3   C  0  1  N  N  N  17.834   5.039   1.319  -1.519   3.798   0.535  C8   2IJ   3  
2IJ  C11  C4   C  0  1  Y  N  N  18.057   5.446   5.483   1.738   1.413  -0.570  C11  2IJ   4  
2IJ  C12  C5   C  0  1  Y  N  N  18.131   4.418   6.430   2.700   1.164   0.399  C12  2IJ   5  
2IJ  C13  C6   C  0  1  Y  N  N  17.947   4.679   7.779   3.788   0.367   0.103  C13  2IJ   6  
2IJ  C14  C7   C  0  1  Y  N  N  17.697   5.989   8.203   3.919  -0.186  -1.162  C14  2IJ   7  
2IJ  C15  C8   C  0  1  Y  N  N  17.644   7.014   7.254   2.958   0.063  -2.131  C15  2IJ   8  
2IJ  C16  C9   C  0  1  Y  N  N  17.832   6.763   5.908   1.870   0.860  -1.836  C16  2IJ   9  
2IJ  O17  O1   O  0  1  N  N  N  17.521   6.269   9.521   4.991  -0.971  -1.453  O17  2IJ  10  
2IJ  C19  C10  C  0  1  Y  N  N  16.604   7.747  11.162   7.136  -0.793  -0.439  C19  2IJ  11  
2IJ  C20  C11  C  0  1  Y  N  N  15.506   8.501  11.616   7.997  -1.120   0.590  C20  2IJ  12  
2IJ  C21  C12  C  0  1  Y  N  N  14.294   8.569  10.876   7.572  -1.947   1.613  C21  2IJ  13  
2IJ  C22  C13  C  0  1  Y  N  N  14.177   7.901   9.668   6.283  -2.448   1.610  C22  2IJ  14  
2IJ  C24  C14  C  0  1  N  N  S  21.965   7.692   0.831  -4.216  -0.419   0.522  C24  2IJ  15  
2IJ  C27  C15  C  0  1  N  N  N  24.594   8.607   0.096  -5.778  -2.915   0.535  C27  2IJ  16  
2IJ  C30  C16  C  0  1  N  N  N  23.325  10.738   0.126  -6.947  -1.761  -1.305  C30  2IJ  17  
2IJ  N1   N1   N  0  1  Y  N  N  20.214   6.459   3.967  -0.639   0.279  -0.258  N1   2IJ  18  
2IJ  C4   C17  C  0  1  Y  N  N  19.960   6.324   1.153  -2.862   1.692   0.527  C4   2IJ  19  
2IJ  C5   C18  C  0  1  Y  N  N  21.021   7.011   1.754  -2.921   0.325   0.320  C5   2IJ  20  
2IJ  C6   C19  C  0  1  Y  N  N  21.122   7.053   3.164  -1.780  -0.354  -0.070  C6   2IJ  21  
2IJ  O7   O2   O  0  1  N  N  N  18.226   5.192   4.160   0.664   2.194  -0.277  O7   2IJ  22  
2IJ  O9   O3   O  0  1  N  N  N  17.898   4.660   0.163  -0.451   4.352   0.358  O9   2IJ  23  
2IJ  N10  N2   N  0  1  N  N  N  16.654   4.929   2.045  -2.594   4.514   0.920  N10  2IJ  24  
2IJ  C18  C20  C  0  1  Y  N  N  16.462   7.040   9.963   5.840  -1.291  -0.442  C18  2IJ  25  
2IJ  C23  C21  C  0  1  Y  N  N  15.270   7.150   9.223   5.418  -2.125   0.583  C23  2IJ  26  
2IJ  C25  C22  C  0  1  N  N  N  22.981   6.754   0.161  -4.029  -1.485   1.603  C25  2IJ  27  
2IJ  C26  C23  C  0  1  N  N  N  23.882   7.576  -0.773  -5.352  -2.219   1.832  C26  2IJ  28  
2IJ  N28  N3   N  0  1  N  N  N  23.503   9.479   0.573  -5.819  -1.918  -0.544  N28  2IJ  29  
2IJ  C29  C24  C  0  1  N  N  N  22.651   8.837   1.566  -4.629  -1.093  -0.790  C29  2IJ  30  
2IJ  N31  N4   N  0  1  N  N  N  24.185  11.187  -0.696  -7.989  -2.493  -1.078  N31  2IJ  31  
2IJ  H1   H1   H  0  1  N  N  N  18.334   3.408   6.105   2.598   1.595   1.384  H1   2IJ  32  
2IJ  H2   H2   H  0  1  N  N  N  17.996   3.876   8.499   4.536   0.174   0.857  H2   2IJ  33  
2IJ  H3   H3   H  0  1  N  N  N  17.452   8.025   7.580   3.060  -0.368  -3.116  H3   2IJ  34  
2IJ  H4   H4   H  0  1  N  N  N  17.806   7.571   5.192   1.121   1.054  -2.590  H4   2IJ  35  
2IJ  H5   H5   H  0  1  N  N  N  17.527   7.715  11.721   7.469  -0.148  -1.239  H5   2IJ  36  
2IJ  H6   H6   H  0  1  N  N  N  15.586   9.041  12.548   9.004  -0.730   0.595  H6   2IJ  37  
2IJ  H7   H7   H  0  1  N  N  N  13.462   9.143  11.257   8.247  -2.201   2.417  H7   2IJ  38  
2IJ  H8   H8   H  0  1  N  N  N  13.269   7.958   9.087   5.953  -3.094   2.410  H8   2IJ  39  
2IJ  H9   H9   H  0  1  N  N  N  21.368   8.142   0.024  -4.993   0.281   0.831  H9   2IJ  40  
2IJ  H10  H10  H  0  1  N  N  N  25.105   8.122   0.940  -5.057  -3.694   0.285  H10  2IJ  41  
2IJ  H11  H11  H  0  1  N  N  N  25.324   9.180  -0.494  -6.766  -3.357   0.662  H11  2IJ  42  
2IJ  H12  H12  H  0  1  N  Y  N  22.489  11.339   0.452  -6.967  -1.025  -2.096  H12  2IJ  43  
2IJ  H13  H13  H  0  1  N  N  N  19.892   6.264   0.077  -3.739   2.243   0.832  H13  2IJ  44  
2IJ  H14  H14  H  0  1  N  N  N  21.953   7.577   3.613  -1.827  -1.421  -0.228  H14  2IJ  45  
2IJ  H15  H15  H  0  1  N  N  N  15.840   4.534   1.619  -3.446   4.072   1.061  H15  2IJ  46  
2IJ  H16  H16  H  0  1  N  N  N  16.619   5.245   2.993  -2.516   5.471   1.056  H16  2IJ  47  
2IJ  H17  H17  H  0  1  N  N  N  15.196   6.635   8.276   4.411  -2.517   0.581  H17  2IJ  48  
2IJ  H18  H18  H  0  1  N  N  N  22.448   5.988  -0.421  -3.269  -2.198   1.282  H18  2IJ  49  
2IJ  H19  H19  H  0  1  N  N  N  23.596   6.266   0.931  -3.712  -1.010   2.531  H19  2IJ  50  
2IJ  H20  H20  H  0  1  N  N  N  23.274   8.081  -1.538  -6.119  -1.503   2.129  H20  2IJ  51  
2IJ  H21  H21  H  0  1  N  N  N  24.618   6.921  -1.263  -5.224  -2.963   2.619  H21  2IJ  52  
2IJ  H22  H22  H  0  1  N  N  N  23.255   8.451   2.400  -4.859  -0.333  -1.536  H22  2IJ  53  
2IJ  H23  H23  H  0  1  N  N  N  21.906   9.548   1.951  -3.815  -1.724  -1.148  H23  2IJ  54  
2IJ  H24  H24  H  0  1  N  N  N  23.981  12.125  -0.977  -8.787  -2.382  -1.617  H24  2IJ  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2IJ  C26  C27  SING  N  N   1  
2IJ  C26  C25  SING  N  N   2  
2IJ  N31  C30  DOUB  N  N   3  
2IJ  C27  N28  SING  N  N   4  
2IJ  C30  N28  SING  N  N   5  
2IJ  C25  C24  SING  N  N   6  
2IJ  O9   C8   DOUB  N  N   7  
2IJ  N28  C29  SING  N  N   8  
2IJ  C24  C29  SING  N  N   9  
2IJ  C24  C5   SING  N  N  10  
2IJ  C4   C5   DOUB  Y  N  11  
2IJ  C4   C3   SING  Y  N  12  
2IJ  C8   C3   SING  N  N  13  
2IJ  C8   N10  SING  N  N  14  
2IJ  C5   C6   SING  Y  N  15  
2IJ  C3   C2   DOUB  Y  N  16  
2IJ  C6   N1   DOUB  Y  N  17  
2IJ  C2   N1   SING  Y  N  18  
2IJ  C2   O7   SING  N  N  19  
2IJ  O7   C11  SING  N  N  20  
2IJ  C11  C16  DOUB  Y  N  21  
2IJ  C11  C12  SING  Y  N  22  
2IJ  C16  C15  SING  Y  N  23  
2IJ  C12  C13  DOUB  Y  N  24  
2IJ  C15  C14  DOUB  Y  N  25  
2IJ  C13  C14  SING  Y  N  26  
2IJ  C14  O17  SING  N  N  27  
2IJ  C23  C22  DOUB  Y  N  28  
2IJ  C23  C18  SING  Y  N  29  
2IJ  O17  C18  SING  N  N  30  
2IJ  C22  C21  SING  Y  N  31  
2IJ  C18  C19  DOUB  Y  N  32  
2IJ  C21  C20  DOUB  Y  N  33  
2IJ  C19  C20  SING  Y  N  34  
2IJ  C12  H1   SING  N  N  35  
2IJ  C13  H2   SING  N  N  36  
2IJ  C15  H3   SING  N  N  37  
2IJ  C16  H4   SING  N  N  38  
2IJ  C19  H5   SING  N  N  39  
2IJ  C20  H6   SING  N  N  40  
2IJ  C21  H7   SING  N  N  41  
2IJ  C22  H8   SING  N  N  42  
2IJ  C24  H9   SING  N  N  43  
2IJ  C27  H10  SING  N  N  44  
2IJ  C27  H11  SING  N  N  45  
2IJ  C30  H12  SING  N  N  46  
2IJ  C4   H13  SING  N  N  47  
2IJ  C6   H14  SING  N  N  48  
2IJ  N10  H15  SING  N  N  49  
2IJ  N10  H16  SING  N  N  50  
2IJ  C23  H17  SING  N  N  51  
2IJ  C25  H18  SING  N  N  52  
2IJ  C25  H19  SING  N  N  53  
2IJ  C26  H20  SING  N  N  54  
2IJ  C26  H21  SING  N  N  55  
2IJ  C29  H22  SING  N  N  56  
2IJ  C29  H23  SING  N  N  57  
2IJ  N31  H24  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2IJ  SMILES            ACDLabs               12.01  "N=CN1CCCC(C1)c1cc(C(N)=O)c(Oc2ccc(Oc3ccccc3)cc2)nc1"  
2IJ  InChI             InChI                 1.03   "InChI=1S/C24H24N4O3/c25-16-28-12-4-5-17(15-28)18-13-22(23(26)29)24(27-14-18)31-21-10-8-20(9-11-21)30-19-6-2-1-3-7-19/h1-3,6-11,13-14,16-17,25H,4-5,12,15H2,(H2,26,29)/b25-16-/t17-/m1/s1"  
2IJ  InChIKey          InChI                 1.03   CLMOAHOTUBCRAU-GGMUZDTOSA-N  
2IJ  SMILES_CANONICAL  CACTVS                3.385  "NC(=O)c1cc(cnc1Oc2ccc(Oc3ccccc3)cc2)[C@@H]4CCCN(C4)C=N"  
2IJ  SMILES            CACTVS                3.385  "NC(=O)c1cc(cnc1Oc2ccc(Oc3ccccc3)cc2)[CH]4CCCN(C4)C=N"  
2IJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[H]/N=C\N1CCC[C@H](C1)c2cc(c(nc2)Oc3ccc(cc3)Oc4ccccc4)C(=O)N"  
2IJ  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)Oc2ccc(cc2)Oc3c(cc(cn3)C4CCCN(C4)C=N)C(=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2IJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-{(3S)-1-[(Z)-iminomethyl]piperidin-3-yl}-2-(4-phenoxyphenoxy)pyridine-3-carboxamide"  
2IJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[(3~{S})-1-(iminomethyl)piperidin-3-yl]-2-(4-phenoxyphenoxy)pyridine-3-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2IJ  "Create component"          2021-06-29  RCSB  
2IJ  "Modify leaving atom flag"  2021-06-29  RCSB  
2IJ  "Initial release"           2021-10-06  RCSB  
##
