data_ZYJ
# 
_chem_comp.id                                    ZYJ 
_chem_comp.name                                  "(4R)-4-({[(1E)-(3,4-dimethoxyphenyl)methylidene]amino}oxy)-L-proline" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C14 H18 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               PRO 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-10-22 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        294.303 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZYJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3P9H 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZYJ C    C    C 0 1 N N N Y N Y -1.199 5.343  1.255  -6.385 -0.016 -0.235 C    ZYJ 1  
ZYJ N    N    N 0 1 N N N Y Y N -2.018 3.321  0.054  -4.573 -0.905 1.167  N    ZYJ 2  
ZYJ O    O    O 0 1 N N N Y N Y -0.347 5.710  0.448  -6.777 -1.154 -0.337 O    ZYJ 3  
ZYJ N1   N1   N 0 1 N N N N N N -1.267 0.074  2.824  -0.346 0.184  -0.087 N1   ZYJ 4  
ZYJ O2   O2   O 0 1 N N N N N N -1.791 0.911  1.941  -1.646 0.742  -0.052 O2   ZYJ 5  
ZYJ C4   C4   C 0 1 N N N N N N 4.304  -2.554 4.670  5.291  2.858  0.249  C4   ZYJ 6  
ZYJ O4   O4   O 0 1 N N N N N N 3.326  -2.532 5.703  5.527  1.455  0.117  O4   ZYJ 7  
ZYJ O5   O5   O 0 1 N N N N N N 1.519  -4.443 6.841  5.840  -1.266 -0.140 O5   ZYJ 8  
ZYJ C6   C6   C 0 1 Y N N N N N 1.090  -3.576 5.800  4.593  -0.727 -0.106 C6   ZYJ 9  
ZYJ C7   C7   C 0 1 Y N N N N N 1.990  -2.632 5.234  4.434  0.651  0.024  C7   ZYJ 10 
ZYJ C9   C9   C 0 1 Y N N N N N -0.250 -3.637 5.333  3.480  -1.550 -0.206 C9   ZYJ 11 
ZYJ CA   CA   C 0 1 N N S Y N N -1.603 3.870  1.348  -5.036 0.264  0.376  CA   ZYJ 12 
ZYJ CB   CB   C 0 1 N N N N N N -0.437 2.967  1.739  -3.970 0.435  -0.728 CB   ZYJ 13 
ZYJ CD   CD   C 0 1 N N N N N N -1.366 2.020  -0.196 -3.099 -0.734 1.241  CD   ZYJ 14 
ZYJ CG   CG   C 0 1 N N R N N N -0.855 1.638  1.184  -2.696 -0.222 -0.159 CG   ZYJ 15 
ZYJ C10  C10  C 0 1 Y N N N N N 1.541  -1.756 4.209  3.167  1.201  0.060  C10  ZYJ 16 
ZYJ C11  C11  C 0 1 Y N N N N N -0.692 -2.761 4.310  2.213  -1.008 -0.172 C11  ZYJ 17 
ZYJ C12  C12  C 0 1 Y N N N N N 0.203  -1.817 3.748  2.046  0.372  -0.036 C12  ZYJ 18 
ZYJ C13  C13  C 0 1 N N N N N N -0.357 -0.734 2.548  0.691  0.953  0.001  C13  ZYJ 19 
ZYJ C14  C14  C 0 1 N N N N N N 1.697  -5.789 6.419  5.929  -2.686 -0.276 C14  ZYJ 20 
ZYJ OXT  O51  O 0 1 N Y N Y N Y -1.819 6.303  2.115  -7.148 0.998  -0.671 O51  ZYJ 21 
ZYJ H    HN   H 0 1 N Y N Y Y N -3.010 3.194  0.057  -4.983 -0.904 2.088  HN   ZYJ 22 
ZYJ H4   H4   H 0 1 N N N N N N 5.308  -2.473 5.113  4.737  3.216  -0.618 H4   ZYJ 23 
ZYJ H4A  H4A  H 0 1 N N N N N N 4.225  -3.498 4.111  4.712  3.046  1.153  H4A  ZYJ 24 
ZYJ H4B  H4B  H 0 1 N N N N N N 4.135  -1.708 3.987  6.244  3.383  0.313  H4B  ZYJ 25 
ZYJ H9   H9   H 0 1 N N N N N N -0.936 -4.354 5.759  3.607  -2.618 -0.312 H9   ZYJ 26 
ZYJ HA   HA   H 0 1 N N N Y N N -2.411 3.874  2.094  -5.082 1.154  1.004  HA   ZYJ 27 
ZYJ HB   HB   H 0 1 N N N N N N 0.512  3.312  1.304  -4.284 -0.074 -1.639 HB   ZYJ 28 
ZYJ HBA  HBA  H 0 1 N N N N N N -0.296 2.929  2.829  -3.796 1.492  -0.925 HBA  ZYJ 29 
ZYJ HD   HD   H 0 1 N N N N N N -2.074 1.276  -0.591 -2.839 0.000  2.003  HD   ZYJ 30 
ZYJ HDA  HDA  H 0 1 N N N N N N -0.548 2.105  -0.927 -2.615 -1.688 1.450  HDA  ZYJ 31 
ZYJ HG   HG   H 0 1 N N N N N N -0.020 0.922  1.183  -2.383 -1.052 -0.792 HG   ZYJ 32 
ZYJ H10  H10  H 0 1 N N N N N N 2.224  -1.039 3.779  3.043  2.269  0.161  H10  ZYJ 33 
ZYJ H11  H11  H 0 1 N N N N N N -1.712 -2.813 3.959  1.348  -1.651 -0.250 H11  ZYJ 34 
ZYJ H13  H13  H 0 1 N N N N N N 0.074  -0.749 1.558  0.564  2.021  0.102  H13  ZYJ 35 
ZYJ H14  H14  H 0 1 N N N N N N 2.028  -6.400 7.271  5.427  -3.164 0.566  H14  ZYJ 36 
ZYJ H14A H14A H 0 0 N N N N N N 0.744  -6.182 6.034  5.451  -2.993 -1.206 H14A ZYJ 37 
ZYJ H14B H14B H 0 0 N N N N N N 2.457  -5.827 5.624  6.977  -2.984 -0.290 H14B ZYJ 38 
ZYJ HXT  H18  H 0 1 N Y N Y N Y -1.463 7.166  1.936  -8.004 0.769  -1.059 H18  ZYJ 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZYJ C   O    DOUB N N 1  
ZYJ C   CA   SING N N 2  
ZYJ C   OXT  SING N N 3  
ZYJ N   CA   SING N N 4  
ZYJ N   CD   SING N N 5  
ZYJ N   H    SING N N 6  
ZYJ N1  O2   SING N N 7  
ZYJ N1  C13  DOUB N E 8  
ZYJ O2  CG   SING N N 9  
ZYJ C4  O4   SING N N 10 
ZYJ C4  H4   SING N N 11 
ZYJ C4  H4A  SING N N 12 
ZYJ C4  H4B  SING N N 13 
ZYJ O4  C7   SING N N 14 
ZYJ O5  C6   SING N N 15 
ZYJ O5  C14  SING N N 16 
ZYJ C6  C7   DOUB Y N 17 
ZYJ C6  C9   SING Y N 18 
ZYJ C7  C10  SING Y N 19 
ZYJ C9  C11  DOUB Y N 20 
ZYJ C9  H9   SING N N 21 
ZYJ CA  CB   SING N N 22 
ZYJ CA  HA   SING N N 23 
ZYJ CB  CG   SING N N 24 
ZYJ CB  HB   SING N N 25 
ZYJ CB  HBA  SING N N 26 
ZYJ CD  CG   SING N N 27 
ZYJ CD  HD   SING N N 28 
ZYJ CD  HDA  SING N N 29 
ZYJ CG  HG   SING N N 30 
ZYJ C10 C12  DOUB Y N 31 
ZYJ C10 H10  SING N N 32 
ZYJ C11 C12  SING Y N 33 
ZYJ C11 H11  SING N N 34 
ZYJ C12 C13  SING N N 35 
ZYJ C13 H13  SING N N 36 
ZYJ C14 H14  SING N N 37 
ZYJ C14 H14A SING N N 38 
ZYJ C14 H14B SING N N 39 
ZYJ OXT HXT  SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZYJ SMILES           ACDLabs              12.01 "O=C(O)C2NCC(O\N=C\c1ccc(OC)c(OC)c1)C2"                                                                                                         
ZYJ SMILES_CANONICAL CACTVS               3.370 "COc1ccc(/C=N/O[C@H]2CN[C@@H](C2)C(O)=O)cc1OC"                                                                                                  
ZYJ SMILES           CACTVS               3.370 "COc1ccc(C=NO[CH]2CN[CH](C2)C(O)=O)cc1OC"                                                                                                       
ZYJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "COc1ccc(cc1OC)/C=N/O[C@@H]2C[C@H](NC2)C(=O)O"                                                                                                  
ZYJ SMILES           "OpenEye OEToolkits" 1.7.0 "COc1ccc(cc1OC)C=NOC2CC(NC2)C(=O)O"                                                                                                             
ZYJ InChI            InChI                1.03  "InChI=1S/C14H18N2O5/c1-19-12-4-3-9(5-13(12)20-2)7-16-21-10-6-11(14(17)18)15-8-10/h3-5,7,10-11,15H,6,8H2,1-2H3,(H,17,18)/b16-7+/t10-,11+/m1/s1" 
ZYJ InChIKey         InChI                1.03  JZPOVOVBIVKIMT-HJILZNIMSA-N                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZYJ "SYSTEMATIC NAME" ACDLabs              12.01 "(4R)-4-({[(E)-(3,4-dimethoxyphenyl)methylidene]amino}oxy)-L-proline"                   
ZYJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S,4R)-4-[(E)-(3,4-dimethoxyphenyl)methylideneamino]oxypyrrolidine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZYJ "Create component"  2010-10-22 RCSB 
ZYJ "Modify descriptor" 2011-06-04 RCSB 
ZYJ "Modify backbone"   2023-11-03 PDBE 
# 
