data_I8K
# 
_chem_comp.id                                    I8K 
_chem_comp.name                                  "[4-[1-[(4~{R})-4-[(3~{R},5~{S},7~{S},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoyl]piperidin-4-yl]oxyphenyl]-bis(oxidanyl)-$l^{4}-borane" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C35 H55 B N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-02-24 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        596.625 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I8K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Z0N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I8K C8  C1  C 0 1 N N N 19.132 -2.003  -4.704 -6.371  1.411  -0.416 C8  I8K 1  
I8K C9  C2  C 0 1 Y N N 20.747 -0.931  -3.228 -8.348  0.161  -0.838 C9  I8K 2  
I8K C10 C3  C 0 1 Y N N 21.494 -1.608  -2.275 -9.355  -0.300 -1.673 C10 I8K 3  
I8K C11 C4  C 0 1 Y N N 21.733 -1.022  -1.048 -10.289 -1.200 -1.197 C11 I8K 4  
I8K C12 C5  C 0 1 Y N N 21.251 0.253   -0.736 -10.220 -1.642 0.111  C12 I8K 5  
I8K C13 C6  C 0 1 Y N N 20.479 0.891   -1.711 -9.217  -1.185 0.946  C13 I8K 6  
I8K N1  N1  N 0 1 N N N 18.167 -4.430  -6.137 -3.698  2.111  0.191  N1  I8K 7  
I8K C6  C7  C 0 1 N N N 19.157 -4.487  -5.053 -4.705  3.181  0.160  C6  I8K 8  
I8K C3  C8  C 0 1 N N N 16.308 -7.518  -5.929 0.011   1.851  -0.287 C3  I8K 9  
I8K C5  C9  C 0 1 N N N 17.587 -5.485  -6.755 -2.398  2.384  -0.035 C5  I8K 10 
I8K C4  C10 C 0 1 N N N 17.672 -6.859  -6.116 -1.378  1.276  -0.000 C4  I8K 11 
I8K C2  C11 C 0 1 N N R 16.224 -8.504  -4.749 1.046   0.726  -0.252 C2  I8K 12 
I8K C15 C12 C 0 1 N N N 18.931 -2.094  -6.199 -5.256  0.366  -0.503 C15 I8K 13 
I8K C16 C13 C 0 1 N N N 17.805 -3.056  -6.511 -4.136  0.737  0.474  C16 I8K 14 
I8K C17 C14 C 0 1 N N R 14.971 -9.400  -4.868 2.448   1.317  -0.415 C17 I8K 15 
I8K C18 C15 C 0 1 N N N 14.723 -9.946  -6.299 2.727   2.352  0.704  C18 I8K 16 
I8K C19 C16 C 0 1 N N N 13.902 -11.244 -6.142 4.003   1.864  1.444  C19 I8K 17 
I8K C22 C17 C 0 1 N N S 12.174 -13.496 -4.691 6.845   0.636  1.625  C22 I8K 18 
I8K C26 C18 C 0 1 N N R 10.353 -14.281 -0.463 9.577   -1.090 -1.258 C26 I8K 19 
I8K C29 C19 C 0 1 N N S 13.040 -14.133 -1.849 7.171   -1.904 0.201  C29 I8K 20 
I8K C30 C20 C 0 1 N N N 14.285 -15.026 -2.085 6.456   -2.844 1.175  C30 I8K 21 
I8K C31 C21 C 0 1 N N S 13.218 -12.721 -2.501 6.194   -0.835 -0.287 C31 I8K 22 
I8K C32 C22 C 0 1 N N N 14.318 -11.868 -1.846 5.056   -1.484 -1.068 C32 I8K 23 
I8K C33 C23 C 0 1 N N N 14.550 -10.512 -2.529 4.004   -0.446 -1.493 C33 I8K 24 
I8K C34 C24 C 0 1 N N R 14.897 -10.690 -4.005 3.504   0.232  -0.233 C34 I8K 25 
I8K C1  C25 C 0 1 N N N 16.279 -7.753  -3.416 0.772   -0.257 -1.392 C1  I8K 26 
I8K O1  O1  O 0 1 N N N 16.965 -5.339  -7.808 -2.049  3.522  -0.267 O1  I8K 27 
I8K C7  C26 C 0 1 N N N 18.931 -3.363  -4.066 -5.818  2.782  -0.813 C7  I8K 28 
I8K O2  O2  O 0 1 N N N 20.500 -1.511  -4.443 -7.432  1.050  -1.302 O2  I8K 29 
I8K B1  B1  B 0 1 N N N 21.420 1.014   0.718  -11.273 -2.655 0.645  B1  I8K 30 
I8K O3  O3  O 0 1 N N N 22.428 0.369   1.637  -10.828 -3.930 0.431  O3  I8K 31 
I8K O4  O4  O 0 1 N N N 21.672 2.451   0.413  -11.459 -2.457 1.984  O4  I8K 32 
I8K C14 C27 C 0 1 Y N N 20.228 0.320   -2.939 -8.281  -0.285 0.474  C14 I8K 33 
I8K C20 C28 C 0 1 N N S 13.681 -11.394 -4.628 4.702   1.001  0.388  C20 I8K 34 
I8K C21 C29 C 0 1 N N R 13.386 -12.798 -4.039 5.669   -0.041 0.919  C21 I8K 35 
I8K O5  O5  O 0 1 N N N 12.414 -13.751 -6.096 6.364   1.383  2.743  O5  I8K 36 
I8K C23 C30 C 0 1 N N N 11.857 -14.841 -4.023 7.830   -0.431 2.109  C23 I8K 37 
I8K C24 C31 C 0 1 N N S 11.794 -14.826 -2.480 8.347   -1.231 0.912  C24 I8K 38 
I8K C25 C32 C 0 1 N N N 10.450 -14.273 -1.973 9.058   -0.289 -0.062 C25 I8K 39 
I8K O6  O6  O 0 1 N N N 9.087  -13.745 -0.036 10.241  -0.210 -2.167 O6  I8K 40 
I8K C27 C33 C 0 1 N N N 11.481 -13.465 0.123  8.402   -1.765 -1.968 C27 I8K 41 
I8K C28 C34 C 0 1 N N N 12.830 -14.034 -0.313 7.690   -2.706 -0.994 C28 I8K 42 
I8K C35 C35 C 0 1 N N N 16.209 -11.483 -4.174 2.998   -0.821 0.755  C35 I8K 43 
I8K H13 H1  H 0 1 N N N 18.400 -1.297  -4.284 -6.749  1.454  0.605  H13 I8K 44 
I8K H14 H2  H 0 1 N N N 21.887 -2.590  -2.492 -9.410  0.046  -2.695 H14 I8K 45 
I8K H15 H3  H 0 1 N N N 22.307 -1.562  -0.310 -11.073 -1.558 -1.847 H15 I8K 46 
I8K H19 H4  H 0 1 N N N 20.065 1.865   -1.494 -9.166  -1.531 1.967  H19 I8K 47 
I8K H10 H5  H 0 1 N N N 19.066 -5.451  -4.531 -5.122  3.318  1.157  H10 I8K 48 
I8K H9  H6  H 0 1 N N N 20.167 -4.395  -5.480 -4.241  4.109  -0.176 H9  I8K 49 
I8K H6  H7  H 0 1 N N N 15.564 -6.724  -5.766 0.014   2.317  -1.273 H6  I8K 50 
I8K H5  H8  H 0 1 N N N 16.063 -8.066  -6.851 0.258   2.597  0.468  H5  I8K 51 
I8K H8  H9  H 0 1 N N N 18.288 -7.506  -6.758 -1.625  0.530  -0.755 H8  I8K 52 
I8K H7  H10 H 0 1 N N N 18.150 -6.758  -5.130 -1.381  0.810  0.985  H7  I8K 53 
I8K H4  H11 H 0 1 N N N 17.106 -9.159  -4.800 0.982   0.203  0.703  H4  I8K 54 
I8K H22 H12 H 0 1 N N N 19.858 -2.453  -6.670 -5.656  -0.614 -0.242 H22 I8K 55 
I8K H21 H13 H 0 1 N N N 18.680 -1.099  -6.594 -4.860  0.339  -1.518 H21 I8K 56 
I8K H24 H14 H 0 1 N N N 16.909 -2.755  -5.949 -3.298  0.053  0.346  H24 I8K 57 
I8K H23 H15 H 0 1 N N N 17.591 -3.021  -7.589 -4.508  0.675  1.497  H23 I8K 58 
I8K H25 H16 H 0 1 N N N 14.101 -8.781  -4.601 2.549   1.782  -1.395 H25 I8K 59 
I8K H26 H17 H 0 1 N N N 15.681 -10.161 -6.794 2.901   3.336  0.268  H26 I8K 60 
I8K H27 H18 H 0 1 N N N 14.160 -9.211  -6.893 1.886   2.392  1.395  H27 I8K 61 
I8K H28 H19 H 0 1 N N N 12.939 -11.158 -6.667 4.630   2.708  1.729  H28 I8K 62 
I8K H29 H20 H 0 1 N N N 14.460 -12.105 -6.538 3.738   1.267  2.316  H29 I8K 63 
I8K H32 H21 H 0 1 N N N 11.298 -12.840 -4.581 7.350   1.306  0.929  H32 I8K 64 
I8K H39 H22 H 0 1 N N N 10.451 -15.319 -0.111 10.277  -1.850 -0.911 H39 I8K 65 
I8K H45 H23 H 0 1 N N N 14.127 -16.008 -1.615 7.154   -3.605 1.523  H45 I8K 66 
I8K H46 H24 H 0 1 N N N 14.442 -15.158 -3.166 6.087   -2.273 2.026  H46 I8K 67 
I8K H47 H25 H 0 1 N N N 15.170 -14.546 -1.642 5.619   -3.324 0.668  H47 I8K 68 
I8K H48 H26 H 0 1 N N N 12.272 -12.188 -2.325 6.725   -0.146 -0.945 H48 I8K 69 
I8K H50 H27 H 0 1 N N N 15.260 -12.436 -1.877 5.463   -1.964 -1.958 H50 I8K 70 
I8K H49 H28 H 0 1 N N N 14.035 -11.684 -0.799 4.579   -2.238 -0.442 H49 I8K 71 
I8K H52 H29 H 0 1 N N N 15.379 -9.994  -2.025 4.457   0.291  -2.156 H52 I8K 72 
I8K H51 H30 H 0 1 N N N 13.635 -9.907  -2.446 3.177   -0.943 -2.001 H51 I8K 73 
I8K H2  H31 H 0 1 N N N 16.218 -8.473  -2.586 1.454   -1.104 -1.314 H2  I8K 74 
I8K H3  H32 H 0 1 N N N 17.225 -7.195  -3.348 -0.257  -0.612 -1.326 H3  I8K 75 
I8K H1  H33 H 0 1 N N N 15.434 -7.051  -3.356 0.922   0.244  -2.348 H1  I8K 76 
I8K H11 H34 H 0 1 N N N 17.902 -3.428  -3.683 -5.417  2.733  -1.825 H11 I8K 77 
I8K H12 H35 H 0 1 N N N 19.640 -3.473  -3.233 -6.618  3.522  -0.774 H12 I8K 78 
I8K H17 H36 H 0 1 N N N 22.473 0.857   2.451  -11.436 -4.616 0.740  H17 I8K 79 
I8K H18 H37 H 0 1 N N N 21.777 2.934   1.224  -10.658 -2.572 2.514  H18 I8K 80 
I8K H20 H38 H 0 1 N N N 19.631 0.844   -3.671 -7.498  0.072  1.127  H20 I8K 81 
I8K H30 H39 H 0 1 N N N 12.808 -10.772 -4.383 5.193   1.631  -0.354 H30 I8K 82 
I8K H31 H40 H 0 1 N N N 14.268 -13.424 -4.238 5.153   -0.701 1.616  H31 I8K 83 
I8K H33 H41 H 0 1 N N N 11.656 -14.180 -6.474 7.058   1.840  3.239  H33 I8K 84 
I8K H34 H42 H 0 1 N N N 10.881 -15.182 -4.397 8.668   0.051  2.613  H34 I8K 85 
I8K H35 H43 H 0 1 N N N 12.635 -15.558 -4.322 7.325   -1.102 2.804  H35 I8K 86 
I8K H36 H44 H 0 1 N N N 11.836 -15.878 -2.160 9.047   -1.992 1.259  H36 I8K 87 
I8K H38 H45 H 0 1 N N N 10.338 -13.238 -2.328 9.896   0.191  0.444  H38 I8K 88 
I8K H37 H46 H 0 1 N N N 9.637  -14.891 -2.382 8.358   0.470  -0.409 H37 I8K 89 
I8K H40 H47 H 0 1 N N N 9.041  -13.757 0.913  10.597  -0.651 -2.952 H40 I8K 90 
I8K H41 H48 H 0 1 N N N 11.396 -12.425 -0.226 7.702   -1.005 -2.316 H41 I8K 91 
I8K H42 H49 H 0 1 N N N 11.415 -13.490 1.221  8.771   -2.336 -2.820 H42 I8K 92 
I8K H44 H50 H 0 1 N N N 12.926 -15.045 0.110  8.389   -3.466 -0.646 H44 I8K 93 
I8K H43 H51 H 0 1 N N N 13.620 -13.389 0.098  6.853   -3.187 -1.500 H43 I8K 94 
I8K H53 H52 H 0 1 N N N 16.165 -12.399 -3.566 2.148   -1.347 0.322  H53 I8K 95 
I8K H54 H53 H 0 1 N N N 16.341 -11.752 -5.232 3.796   -1.533 0.967  H54 I8K 96 
I8K H55 H54 H 0 1 N N N 17.056 -10.864 -3.844 2.691   -0.334 1.680  H55 I8K 97 
I8K H16 H55 H 0 1 N N N 20.348 0.940   1.253  -12.322 -2.491 0.064  H16 I8K 98 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I8K O1  C5  DOUB N N 1   
I8K C5  N1  SING N N 2   
I8K C5  C4  SING N N 3   
I8K C16 C15 SING N N 4   
I8K C16 N1  SING N N 5   
I8K C18 C19 SING N N 6   
I8K C18 C17 SING N N 7   
I8K C15 C8  SING N N 8   
I8K C19 C20 SING N N 9   
I8K N1  C6  SING N N 10  
I8K C4  C3  SING N N 11  
I8K O5  C22 SING N N 12  
I8K C3  C2  SING N N 13  
I8K C6  C7  SING N N 14  
I8K C17 C2  SING N N 15  
I8K C17 C34 SING N N 16  
I8K C2  C1  SING N N 17  
I8K C8  O2  SING N N 18  
I8K C8  C7  SING N N 19  
I8K C22 C21 SING N N 20  
I8K C22 C23 SING N N 21  
I8K C20 C21 SING N N 22  
I8K C20 C34 SING N N 23  
I8K O2  C9  SING N N 24  
I8K C35 C34 SING N N 25  
I8K C21 C31 SING N N 26  
I8K C23 C24 SING N N 27  
I8K C34 C33 SING N N 28  
I8K C9  C14 DOUB Y N 29  
I8K C9  C10 SING Y N 30  
I8K C14 C13 SING Y N 31  
I8K C33 C32 SING N N 32  
I8K C31 C29 SING N N 33  
I8K C31 C32 SING N N 34  
I8K C24 C25 SING N N 35  
I8K C24 C29 SING N N 36  
I8K C10 C11 DOUB Y N 37  
I8K C30 C29 SING N N 38  
I8K C25 C26 SING N N 39  
I8K C29 C28 SING N N 40  
I8K C13 C12 DOUB Y N 41  
I8K C11 C12 SING Y N 42  
I8K C12 B1  SING N N 43  
I8K C26 O6  SING N N 44  
I8K C26 C27 SING N N 45  
I8K C28 C27 SING N N 46  
I8K O4  B1  SING N N 47  
I8K B1  O3  SING N N 48  
I8K C8  H13 SING N N 49  
I8K C10 H14 SING N N 50  
I8K C11 H15 SING N N 51  
I8K C13 H19 SING N N 52  
I8K C6  H10 SING N N 53  
I8K C6  H9  SING N N 54  
I8K C3  H6  SING N N 55  
I8K C3  H5  SING N N 56  
I8K C4  H8  SING N N 57  
I8K C4  H7  SING N N 58  
I8K C2  H4  SING N N 59  
I8K C15 H22 SING N N 60  
I8K C15 H21 SING N N 61  
I8K C16 H24 SING N N 62  
I8K C16 H23 SING N N 63  
I8K C17 H25 SING N N 64  
I8K C18 H26 SING N N 65  
I8K C18 H27 SING N N 66  
I8K C19 H28 SING N N 67  
I8K C19 H29 SING N N 68  
I8K C22 H32 SING N N 69  
I8K C26 H39 SING N N 70  
I8K C30 H45 SING N N 71  
I8K C30 H46 SING N N 72  
I8K C30 H47 SING N N 73  
I8K C31 H48 SING N N 74  
I8K C32 H50 SING N N 75  
I8K C32 H49 SING N N 76  
I8K C33 H52 SING N N 77  
I8K C33 H51 SING N N 78  
I8K C1  H2  SING N N 79  
I8K C1  H3  SING N N 80  
I8K C1  H1  SING N N 81  
I8K C7  H11 SING N N 82  
I8K C7  H12 SING N N 83  
I8K O3  H17 SING N N 84  
I8K O4  H18 SING N N 85  
I8K C14 H20 SING N N 86  
I8K C20 H30 SING N N 87  
I8K C21 H31 SING N N 88  
I8K O5  H33 SING N N 89  
I8K C23 H34 SING N N 90  
I8K C23 H35 SING N N 91  
I8K C24 H36 SING N N 92  
I8K C25 H38 SING N N 93  
I8K C25 H37 SING N N 94  
I8K O6  H40 SING N N 95  
I8K C27 H41 SING N N 96  
I8K C27 H42 SING N N 97  
I8K C28 H44 SING N N 98  
I8K C28 H43 SING N N 99  
I8K C35 H53 SING N N 100 
I8K C35 H54 SING N N 101 
I8K C35 H55 SING N N 102 
I8K B1  H16 SING N N 103 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I8K InChI            InChI                1.06  "InChI=1S/C35H55BNO6/c1-22(4-11-32(40)37-18-14-27(15-19-37)43-26-7-5-24(6-8-26)36(41)42)28-9-10-29-33-30(13-17-35(28,29)3)34(2)16-12-25(38)20-23(34)21-31(33)39/h5-8,22-23,25,27-31,33,36,38-39,41-42H,4,9-21H2,1-3H3/t22-,23+,25-,28-,29+,30+,31+,33+,34+,35-/m1/s1" 
I8K InChIKey         InChI                1.06  PHWWHXAZUYBGQF-KSZJEZMCSA-N                                                                                                                                                                                                                                           
I8K SMILES_CANONICAL CACTVS               3.385 "C[C@H](CCC(=O)N1CCC(CC1)Oc2ccc(cc2)[BH](O)O)[C@H]3CC[C@H]4[C@@H]5[C@@H](O)C[C@@H]6C[C@H](O)CC[C@]6(C)[C@H]5CC[C@]34C"                                                                                                                                                
I8K SMILES           CACTVS               3.385 "C[CH](CCC(=O)N1CCC(CC1)Oc2ccc(cc2)[BH](O)O)[CH]3CC[CH]4[CH]5[CH](O)C[CH]6C[CH](O)CC[C]6(C)[CH]5CC[C]34C"                                                                                                                                                             
I8K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[BH](c1ccc(cc1)OC2CCN(CC2)C(=O)CC[C@@H](C)[C@H]3CC[C@@H]4[C@@]3(CC[C@H]5[C@H]4[C@H](C[C@H]6[C@@]5(CC[C@H](C6)O)C)O)C)(O)O"                                                                                                                                           
I8K SMILES           "OpenEye OEToolkits" 2.0.7 "[BH](c1ccc(cc1)OC2CCN(CC2)C(=O)CCC(C)C3CCC4C3(CCC5C4C(CC6C5(CCC(C6)O)C)O)C)(O)O"                                                                                                                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           I8K 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[4-[1-[(4~{R})-4-[(3~{R},5~{S},7~{S},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoyl]piperidin-4-yl]oxyphenyl]-bis(oxidanyl)-$l^{4}-borane" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I8K "Create component"  2022-02-24 PDBE 
I8K "Initial release"   2022-05-04 RCSB 
I8K "Modify descriptor" 2022-08-22 RCSB 
# 
