data_IRK
#

_chem_comp.id                                   IRK
_chem_comp.name                                 "(1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2S)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H37 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2022-01-27
_chem_comp.pdbx_modified_date                   2022-02-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       491.599
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    IRK
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7TQ8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IRK  C02  C1   C  0  1  N  N  N  -21.450  23.096   2.452   -2.520  -0.163  -0.155  C02  IRK   1  
IRK  C04  C2   C  0  1  N  N  S  -20.977  25.477   1.854   -0.181  -0.234   0.521  C04  IRK   2  
IRK  C05  C3   C  0  1  N  N  N  -21.226  26.502   0.752   -0.016  -1.594   1.203  C05  IRK   3  
IRK  C06  C4   C  0  1  N  N  N  -20.564  26.081  -0.587   -1.296  -1.941   1.966  C06  IRK   4  
IRK  C07  C5   C  0  1  N  N  N  -19.018  26.183  -0.519   -1.179  -3.352   2.544  C07  IRK   5  
IRK  C08  C6   C  0  1  N  N  N  -21.117  26.957  -1.732   -1.499  -0.939   3.104  C08  IRK   6  
IRK  C09  C7   C  0  1  N  N  N  -21.556  25.988   3.166    1.121   0.163  -0.127  C09  IRK   7  
IRK  C11  C8   C  0  1  N  N  S  -21.001  27.086   5.395    3.518   0.586  -0.019  C11  IRK   8  
IRK  C12  C9   C  0  1  N  N  N  -20.274  26.284   6.496    3.836  -0.521  -1.025  C12  IRK   9  
IRK  C13  C10  C  0  1  N  N  S  -20.761  24.743   6.587    3.996  -1.851  -0.286  C13  IRK  10  
IRK  C14  C11  C  0  1  N  N  N  -20.184  24.111   7.507    4.302  -2.966  -1.262  C14  IRK  11  
IRK  C16  C12  C  0  1  N  N  N  -22.637  23.651   7.577    5.771  -3.252   0.514  C16  IRK  12  
IRK  C17  C13  C  0  1  N  N  N  -22.419  24.709   6.919    5.232  -1.810   0.641  C17  IRK  13  
IRK  C19  C14  C  0  1  N  N  R  -20.635  28.560   5.491    3.445   1.931  -0.746  C19  IRK  14  
IRK  C23  C15  C  0  1  N  N  N  -22.236  21.032   3.297   -4.852  -0.050  -0.651  C23  IRK  15  
IRK  C24  C16  C  0  1  N  N  R  -23.264  19.885   3.072   -5.796  -0.171  -1.849  C24  IRK  16  
IRK  C25  C17  C  0  1  N  N  N  -22.748  18.518   3.560   -6.603   1.068  -2.241  C25  IRK  17  
IRK  C26  C18  C  0  1  N  N  R  -22.959  18.767   2.061   -7.300  -0.119  -1.572  C26  IRK  18  
IRK  C27  C19  C  0  1  N  N  N  -21.692  18.913   1.186   -7.744   0.052  -0.118  C27  IRK  19  
IRK  C28  C20  C  0  1  N  N  N  -22.041  19.611  -0.146   -9.269  -0.044  -0.036  C28  IRK  20  
IRK  C29  C21  C  0  1  N  N  N  -23.052  18.787  -0.977   -9.714   0.126   1.418  C29  IRK  21  
IRK  N03  N1   N  0  1  N  N  N  -21.623  24.227   1.545   -1.227  -0.324  -0.500  N03  IRK  22  
IRK  N10  N2   N  0  1  N  N  N  -20.590  26.584   4.094    2.231   0.308   0.623  N10  IRK  23  
IRK  N15  N3   N  0  1  N  N  N  -21.319  23.293   8.271    5.302  -3.731  -0.792  N15  IRK  24  
IRK  O01  O1   O  0  1  N  N  N  -20.650  23.138   3.354   -2.818   0.057   1.003  O01  IRK  25  
IRK  O18  O2   O  0  1  N  N  N  -19.029  24.046   7.769    3.728  -3.144  -2.316  O18  IRK  26  
IRK  O20  O3   O  0  1  N  N  N  -21.345  29.275   4.505    4.694   2.193  -1.388  O20  IRK  27  
IRK  O21  O4   O  0  1  N  N  N  -22.717  25.898   3.439    1.168   0.353  -1.324  O21  IRK  28  
IRK  O22  O5   O  0  1  N  N  N  -22.284  21.973   2.236   -3.482  -0.239  -1.094  O22  IRK  29  
IRK  H1   H1   H  0  1  N  N  N  -19.893  25.329   1.971   -0.460   0.513   1.264  H1   IRK  30  
IRK  H2   H2   H  0  1  N  N  N  -20.810  27.471   1.066    0.176  -2.358   0.450  H2   IRK  31  
IRK  H3   H3   H  0  1  N  N  N  -22.310  26.602   0.597    0.822  -1.552   1.900  H3   IRK  32  
IRK  H4   H4   H  0  1  N  N  N  -20.832  25.034  -0.791   -2.147  -1.895   1.286  H4   IRK  33  
IRK  H5   H5   H  0  1  N  N  N  -18.644  25.553   0.302   -0.328  -3.398   3.223  H5   IRK  34  
IRK  H6   H6   H  0  1  N  N  N  -18.586  25.840  -1.471   -2.091  -3.599   3.087  H6   IRK  35  
IRK  H7   H7   H  0  1  N  N  N  -18.727  27.229  -0.340   -1.035  -4.066   1.733  H7   IRK  36  
IRK  H8   H8   H  0  1  N  N  N  -22.213  26.871  -1.763   -1.582   0.067   2.693  H8   IRK  37  
IRK  H9   H9   H  0  1  N  N  N  -20.836  28.006  -1.559   -2.411  -1.186   3.648  H9   IRK  38  
IRK  H10  H10  H  0  1  N  N  N  -20.695  26.618  -2.690   -0.648  -0.984   3.784  H10  IRK  39  
IRK  H11  H11  H  0  1  N  N  N  -22.087  26.970   5.523    4.301   0.625   0.738  H11  IRK  40  
IRK  H12  H12  H  0  1  N  N  N  -19.195  26.298   6.284    3.022  -0.602  -1.746  H12  IRK  41  
IRK  H13  H13  H  0  1  N  N  N  -20.464  26.769   7.465    4.762  -0.282  -1.548  H13  IRK  42  
IRK  H14  H14  H  0  1  N  N  N  -20.622  24.287   5.595    3.097  -2.079   0.286  H14  IRK  43  
IRK  H15  H15  H  0  1  N  N  N  -23.426  23.824   8.324    6.860  -3.252   0.547  H15  IRK  44  
IRK  H16  H16  H  0  1  N  N  N  -22.944  22.839   6.901    5.369  -3.878   1.311  H16  IRK  45  
IRK  H17  H17  H  0  1  N  N  N  -22.705  25.590   7.512    5.965  -1.087   0.282  H17  IRK  46  
IRK  H18  H18  H  0  1  N  N  N  -22.993  24.697   5.981    4.942  -1.591   1.669  H18  IRK  47  
IRK  H19  H19  H  0  1  N  N  N  -19.920  28.969   6.220    2.652   1.897  -1.493  H19  IRK  48  
IRK  H21  H21  H  0  1  N  N  N  -21.225  20.603   3.352   -4.956   0.939  -0.206  H21  IRK  49  
IRK  H22  H22  H  0  1  N  N  N  -22.469  21.544   4.242   -5.103  -0.810   0.088  H22  IRK  50  
IRK  H23  H23  H  0  1  N  N  N  -24.322  20.120   3.260   -5.455  -0.824  -2.653  H23  IRK  51  
IRK  H24  H24  H  0  1  N  N  N  -23.420  17.839   4.105   -6.462   1.970  -1.645  H24  IRK  52  
IRK  H25  H25  H  0  1  N  N  N  -21.729  18.427   3.964   -6.793   1.230  -3.302  H25  IRK  53  
IRK  H26  H26  H  0  1  N  N  N  -23.824  18.274   1.594   -7.948  -0.737  -2.192  H26  IRK  54  
IRK  H27  H27  H  0  1  N  N  N  -21.279  17.915   0.976   -7.298  -0.733   0.493  H27  IRK  55  
IRK  H28  H28  H  0  1  N  N  N  -20.945  19.513   1.726   -7.421   1.026   0.249  H28  IRK  56  
IRK  H29  H29  H  0  1  N  N  N  -21.119  19.741  -0.733   -9.716   0.741  -0.646  H29  IRK  57  
IRK  H30  H30  H  0  1  N  N  N  -22.478  20.596   0.072   -9.592  -1.018  -0.403  H30  IRK  58  
IRK  H31  H31  H  0  1  N  N  N  -23.274  19.316  -1.915  -10.800   0.058   1.476  H31  IRK  59  
IRK  H32  H32  H  0  1  N  N  N  -22.621  17.801  -1.206   -9.267  -0.659   2.029  H32  IRK  60  
IRK  H33  H33  H  0  1  N  N  N  -23.980  18.657  -0.401   -9.390   1.100   1.785  H33  IRK  61  
IRK  H34  H34  H  0  1  N  N  N  -22.182  24.135   0.721   -0.990  -0.499  -1.424  H34  IRK  62  
IRK  H35  H35  H  0  1  N  N  N  -19.628  26.647   3.827    2.178   0.228   1.589  H35  IRK  63  
IRK  H36  H36  H  0  1  N  N  N  -21.196  22.673   9.046    5.668  -4.500  -1.256  H36  IRK  64  
IRK  H37  H37  H  0  1  N  N  N  -21.121  30.197   4.559    4.946   1.528  -2.043  H37  IRK  65  
IRK  S1   S1   S  0  1  N  Y  N        ?       ?       ?    3.092   3.247   0.451  S1   IRK  66  
IRK  O2   O6   O  0  1  N  Y  N        ?       ?       ?    1.737   2.876   1.036  O2   IRK  67  
IRK  O3   O7   O  0  1  N  Y  N        ?       ?       ?    3.983   3.168   1.556  O3   IRK  68  
IRK  O1   O8   O  0  1  N  Y  N        ?       ?       ?    2.861   4.480  -0.217  O1   IRK  69  
IRK  H20  H20  H  0  1  N  Y  N        ?       ?       ?    1.412   3.498   1.701  H20  IRK  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IRK  C08  C06  SING  N  N   1  
IRK  C29  C28  SING  N  N   2  
IRK  C06  C07  SING  N  N   3  
IRK  C06  C05  SING  N  N   4  
IRK  C28  C27  SING  N  N   5  
IRK  C05  C04  SING  N  N   6  
IRK  C27  C26  SING  N  N   7  
IRK  N03  C04  SING  N  N   8  
IRK  N03  C02  SING  N  N   9  
IRK  C04  C09  SING  N  N  10  
IRK  C26  C24  SING  N  N  11  
IRK  C26  C25  SING  N  N  12  
IRK  O22  C02  SING  N  N  13  
IRK  O22  C23  SING  N  N  14  
IRK  C02  O01  DOUB  N  N  15  
IRK  C24  C23  SING  N  N  16  
IRK  C24  C25  SING  N  N  17  
IRK  C09  O21  DOUB  N  N  18  
IRK  C09  N10  SING  N  N  19  
IRK  N10  C11  SING  N  N  20  
IRK  O20  C19  SING  N  N  21  
IRK  C11  C19  SING  N  N  22  
IRK  C11  C12  SING  N  N  23  
IRK  C12  C13  SING  N  N  24  
IRK  C13  C17  SING  N  N  25  
IRK  C13  C14  SING  N  N  26  
IRK  C17  C16  SING  N  N  27  
IRK  C14  O18  DOUB  N  N  28  
IRK  C14  N15  SING  N  N  29  
IRK  C16  N15  SING  N  N  30  
IRK  C04  H1   SING  N  N  31  
IRK  C05  H2   SING  N  N  32  
IRK  C05  H3   SING  N  N  33  
IRK  C06  H4   SING  N  N  34  
IRK  C07  H5   SING  N  N  35  
IRK  C07  H6   SING  N  N  36  
IRK  C07  H7   SING  N  N  37  
IRK  C08  H8   SING  N  N  38  
IRK  C08  H9   SING  N  N  39  
IRK  C08  H10  SING  N  N  40  
IRK  C11  H11  SING  N  N  41  
IRK  C12  H12  SING  N  N  42  
IRK  C12  H13  SING  N  N  43  
IRK  C13  H14  SING  N  N  44  
IRK  C16  H15  SING  N  N  45  
IRK  C16  H16  SING  N  N  46  
IRK  C17  H17  SING  N  N  47  
IRK  C17  H18  SING  N  N  48  
IRK  C19  H19  SING  N  N  49  
IRK  C23  H21  SING  N  N  50  
IRK  C23  H22  SING  N  N  51  
IRK  C24  H23  SING  N  N  52  
IRK  C25  H24  SING  N  N  53  
IRK  C25  H25  SING  N  N  54  
IRK  C26  H26  SING  N  N  55  
IRK  C27  H27  SING  N  N  56  
IRK  C27  H28  SING  N  N  57  
IRK  C28  H29  SING  N  N  58  
IRK  C28  H30  SING  N  N  59  
IRK  C29  H31  SING  N  N  60  
IRK  C29  H32  SING  N  N  61  
IRK  C29  H33  SING  N  N  62  
IRK  N03  H34  SING  N  N  63  
IRK  N10  H35  SING  N  N  64  
IRK  N15  H36  SING  N  N  65  
IRK  O20  H37  SING  N  N  66  
IRK  C19  S1   SING  N  N  67  
IRK  S1   O2   SING  N  N  68  
IRK  S1   O3   DOUB  N  N  69  
IRK  S1   O1   DOUB  N  N  70  
IRK  O2   H20  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IRK  SMILES            ACDLabs               12.01  "CC(C)CC(NC(=O)OCC1CC1CCC)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"  
IRK  InChI             InChI                 1.03   "InChI=1S/C21H37N3O8S/c1-4-5-13-9-15(13)11-32-21(28)24-16(8-12(2)3)19(26)23-17(20(27)33(29,30)31)10-14-6-7-22-18(14)25/h12-17,20,27H,4-11H2,1-3H3,(H,22,25)(H,23,26)(H,24,28)(H,29,30,31)/t13-,14-,15-,16-,17-,20+/m0/s1"  
IRK  InChIKey          InChI                 1.03   ZYXQADHLOGEXOL-CLTKYUOCSA-N  
IRK  SMILES_CANONICAL  CACTVS                3.385  "CCC[C@H]1C[C@H]1COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@H](O)[S](O)(=O)=O"  
IRK  SMILES            CACTVS                3.385  "CCC[CH]1C[CH]1COC(=O)N[CH](CC(C)C)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"  
IRK  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCC[C@H]1C[C@H]1COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)C(O)S(=O)(=O)O"  
IRK  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCC1CC1COC(=O)NC(CC(C)C)C(=O)NC(CC2CCNC2=O)C(O)S(=O)(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
IRK  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2S)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid"  
IRK  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-[[(2~{S})-4-methyl-2-[[(1~{R},2~{S})-2-propylcyclopropyl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IRK  "Create component"  2022-01-27  RCSB  
IRK  "Initial release"   2022-03-02  RCSB  
##
