data_PRK
# 
_chem_comp.id                                    PRK 
_chem_comp.name                                  N~6~-propanoyl-L-lysine 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H18 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               LYS 
_chem_comp.pdbx_synonyms                         "N(6)-Propionyllysine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-05-12 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        202.251 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PRK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3MUK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PRK C    C    C 0 1 N N N Y N Y -4.693 -10.153 -5.994 -4.582 -0.308 -0.036 C    PRK 1  
PRK N    N    N 0 1 N N N Y Y N -2.523 -10.343 -4.863 -3.355 1.769  0.257  N    PRK 2  
PRK O    O    O 0 1 N N N Y N Y -5.967 -10.280 -5.985 -5.248 0.026  0.915  O    PRK 3  
PRK CA   CA   C 0 1 N N S Y N N -3.944 -10.026 -4.685 -3.319 0.442  -0.372 CA   PRK 4  
PRK CB   CB   C 0 1 N N N N N N -4.113 -8.598  -4.134 -2.109 -0.337 0.148  CB   PRK 5  
PRK CD   CD   C 0 1 N N N N N N -4.139 -7.264  -2.016 0.387  -0.419 0.220  CD   PRK 6  
PRK CE   CE   C 0 1 N N N N N N -3.604 -7.177  -0.582 1.673  0.277  -0.229 CE   PRK 7  
PRK CG   CG   C 0 1 N N N N N N -3.518 -8.441  -2.734 -0.823 0.360  -0.301 CG   PRK 8  
PRK NZ   NZ   N 0 1 N N N N N N -4.371 -6.092  0.064  2.832  -0.468 0.270  NZ   PRK 9  
PRK CAA  CAA  C 0 1 N N N N N N -5.954 -4.242  1.405  6.557  -0.108 0.059  CAA  PRK 10 
PRK OAD  OAD  O 0 1 N N N N N N -2.550 -4.838  0.239  4.242  0.967  -0.664 OAD  PRK 11 
PRK CAF  CAF  C 0 1 N N N N N N -4.562 -3.825  1.066  5.271  -0.804 0.508  CAF  PRK 12 
PRK CAL  CAL  C 0 1 N N N N N N -3.776 -4.952  0.429  4.079  -0.038 -0.005 CAL  PRK 13 
PRK OXT  OXT  O 0 1 N Y N Y N Y -3.956 -10.072 -7.110 -4.964 -1.351 -0.790 OXT  PRK 14 
PRK H    H    H 0 1 N N N Y Y N -2.049 -10.253 -3.987 -3.428 1.691  1.260  H    PRK 15 
PRK H2   H2   H 0 1 N Y N Y Y N -2.430 -11.281 -5.197 -2.549 2.316  -0.006 H2   PRK 16 
PRK HA   HA   H 0 1 N N N Y N N -4.361 -10.745 -3.965 -3.240 0.555  -1.454 HA   PRK 17 
PRK HB2  HB2  H 0 1 N N N N N N -3.601 -7.899  -4.812 -2.142 -0.373 1.237  HB2  PRK 18 
PRK HB3  HB3  H 0 1 N N N N N N -5.187 -8.367  -4.085 -2.131 -1.351 -0.250 HB3  PRK 19 
PRK HD2  HD2  H 0 1 N N N N N N -5.231 -7.392  -1.988 0.365  -1.433 -0.178 HD2  PRK 20 
PRK HD3  HD3  H 0 1 N N N N N N -3.887 -6.338  -2.553 0.354  -0.455 1.309  HD3  PRK 21 
PRK HE2  HE2  H 0 1 N N N N N N -3.753 -8.129  -0.052 1.706  0.313  -1.318 HE2  PRK 22 
PRK HE3  HE3  H 0 1 N N N N N N -2.528 -6.949  -0.580 1.695  1.292  0.169  HE3  PRK 23 
PRK HG2  HG2  H 0 1 N N N N N N -3.713 -9.357  -2.157 -0.790 0.396  -1.390 HG2  PRK 24 
PRK HG3  HG3  H 0 1 N N N N N N -2.434 -8.277  -2.821 -0.801 1.374  0.097  HG3  PRK 25 
PRK HZ   HZ   H 0 1 N N N N N N -5.350 -6.212  0.231  2.701  -1.271 0.798  HZ   PRK 26 
PRK HAA  HAA  H 0 1 N N N N N N -6.489 -3.397  1.864  6.589  -0.072 -1.030 HAA  PRK 27 
PRK HAAA HAAA H 0 0 N N N N N N -6.477 -4.553  0.488  6.579  0.906  0.457  HAAA PRK 28 
PRK HAAB HAAB H 0 0 N N N N N N -5.922 -5.084  2.112  7.419  -0.663 0.430  HAAB PRK 29 
PRK HAF  HAF  H 0 1 N N N N N N -4.608 -2.984  0.359  5.249  -1.819 0.110  HAF  PRK 30 
PRK HAFA HAFA H 0 0 N N N N N N -4.051 -3.517  1.990  5.238  -0.841 1.597  HAFA PRK 31 
PRK HXT  HXT  H 0 1 N Y N Y N Y -4.524 -10.123 -7.870 -5.779 -1.804 -0.532 HXT  PRK 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRK C   O    DOUB N N 1  
PRK C   CA   SING N N 2  
PRK C   OXT  SING N N 3  
PRK N   CA   SING N N 4  
PRK CA  CB   SING N N 5  
PRK CB  CG   SING N N 6  
PRK CD  CE   SING N N 7  
PRK CD  CG   SING N N 8  
PRK CE  NZ   SING N N 9  
PRK NZ  CAL  SING N N 10 
PRK CAA CAF  SING N N 11 
PRK OAD CAL  DOUB N N 12 
PRK CAF CAL  SING N N 13 
PRK N   H    SING N N 14 
PRK N   H2   SING N N 15 
PRK CA  HA   SING N N 16 
PRK CB  HB2  SING N N 17 
PRK CB  HB3  SING N N 18 
PRK CD  HD2  SING N N 19 
PRK CD  HD3  SING N N 20 
PRK CE  HE2  SING N N 21 
PRK CE  HE3  SING N N 22 
PRK CG  HG2  SING N N 23 
PRK CG  HG3  SING N N 24 
PRK NZ  HZ   SING N N 25 
PRK CAA HAA  SING N N 26 
PRK CAA HAAA SING N N 27 
PRK CAA HAAB SING N N 28 
PRK CAF HAF  SING N N 29 
PRK CAF HAFA SING N N 30 
PRK OXT HXT  SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRK SMILES           ACDLabs              12.01 "O=C(O)C(N)CCCCNC(=O)CC"                                                                             
PRK SMILES_CANONICAL CACTVS               3.370 "CCC(=O)NCCCC[C@H](N)C(O)=O"                                                                         
PRK SMILES           CACTVS               3.370 "CCC(=O)NCCCC[CH](N)C(O)=O"                                                                          
PRK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCC(=O)NCCCC[C@@H](C(=O)O)N"                                                                        
PRK SMILES           "OpenEye OEToolkits" 1.7.0 "CCC(=O)NCCCCC(C(=O)O)N"                                                                             
PRK InChI            InChI                1.03  "InChI=1S/C9H18N2O3/c1-2-8(12)11-6-4-3-5-7(10)9(13)14/h7H,2-6,10H2,1H3,(H,11,12)(H,13,14)/t7-/m0/s1" 
PRK InChIKey         InChI                1.03  PCANIHQHQYUJPY-ZETCQYMHSA-N                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRK "SYSTEMATIC NAME" ACDLabs              12.01 N~6~-propanoyl-L-lysine                         
PRK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-azanyl-6-(propanoylamino)hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PRK "Create component"  2010-05-12 PDBJ 
PRK "Modify descriptor" 2011-06-04 RCSB 
PRK "Modify synonyms"   2021-03-01 PDBE 
PRK "Modify backbone"   2023-11-03 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      PRK 
_pdbx_chem_comp_synonyms.name         "N(6)-Propionyllysine" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
