data_1VL
# 
_chem_comp.id                                    1VL 
_chem_comp.name                                  "(3S)-1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-3-hydroxy-1,3-dihydro-2H-indol-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H23 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-06-20 
_chem_comp.pdbx_modified_date                    2014-04-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        381.425 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1VL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4L1O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1VL O10 O10 O 0 1 N N N 10.368 17.240 66.550 -3.371 2.851  0.650  O10 1VL 1  
1VL C8  C8  C 0 1 N N N 10.979 16.451 65.453 -3.830 1.769  0.349  C8  1VL 2  
1VL C7  C7  C 0 1 N N S 10.498 16.766 64.101 -5.231 1.274  0.643  C7  1VL 3  
1VL O11 O11 O 0 1 N N N 10.715 18.129 63.695 -6.201 2.115  0.016  O11 1VL 4  
1VL N9  N9  N 0 1 N N N 11.885 15.469 65.703 -3.195 0.788  -0.314 N9  1VL 5  
1VL C5  C5  C 0 1 Y N N 12.206 15.003 64.482 -4.005 -0.332 -0.503 C5  1VL 6  
1VL C4  C4  C 0 1 Y N N 13.067 14.024 63.994 -3.744 -1.549 -1.130 C4  1VL 7  
1VL C3  C3  C 0 1 Y N N 13.146 13.778 62.630 -4.722 -2.520 -1.191 C3  1VL 8  
1VL C2  C2  C 0 1 Y N N 12.374 14.505 61.724 -5.968 -2.294 -0.633 C2  1VL 9  
1VL C1  C1  C 0 1 Y N N 11.498 15.502 62.162 -6.234 -1.088 -0.009 C1  1VL 10 
1VL C6  C6  C 0 1 Y N N 11.386 15.780 63.509 -5.262 -0.114 0.046  C6  1VL 11 
1VL C12 C12 C 0 1 N N N 12.453 15.012 66.983 -1.811 0.884  -0.784 C12 1VL 12 
1VL N13 N13 N 0 1 N N N 12.036 13.672 67.463 -0.903 0.392  0.261  N13 1VL 13 
1VL C14 C14 C 0 1 N N N 12.750 12.600 66.761 -0.830 -1.076 0.246  C14 1VL 14 
1VL C15 C15 C 0 1 N N N 12.628 11.274 67.489 0.061  -1.551 1.397  C15 1VL 15 
1VL N16 N16 N 0 1 N N N 13.111 11.362 68.843 1.398  -0.958 1.254  N16 1VL 16 
1VL C17 C17 C 0 1 N N N 12.285 12.319 69.532 1.325  0.510  1.269  C17 1VL 17 
1VL C18 C18 C 0 1 N N N 12.342 13.687 68.888 0.434  0.985  0.118  C18 1VL 18 
1VL H1  H1  H 0 1 N N N 9.444  16.474 63.981 -5.402 1.231  1.719  H1  1VL 19 
1VL H2  H2  H 0 1 N N N 10.089 18.694 64.133 -6.183 3.032  0.321  H2  1VL 20 
1VL H3  H3  H 0 1 N N N 13.676 13.453 64.679 -2.775 -1.733 -1.568 H3  1VL 21 
1VL H4  H4  H 0 1 N N N 13.815 13.013 62.265 -4.515 -3.461 -1.678 H4  1VL 22 
1VL H5  H5  H 0 1 N N N 12.454 14.294 60.668 -6.728 -3.060 -0.677 H5  1VL 23 
1VL H6  H6  H 0 1 N N N 10.908 16.055 61.446 -7.205 -0.908 0.428  H6  1VL 24 
1VL H7  H7  H 0 1 N N N 13.548 15.000 66.875 -1.690 0.281  -1.684 H7  1VL 25 
1VL H8  H8  H 0 1 N N N 12.168 15.744 67.753 -1.575 1.924  -1.010 H8  1VL 26 
1VL H10 H10 H 0 1 N N N 12.328 12.492 65.751 -1.831 -1.491 0.366  H10 1VL 27 
1VL H11 H11 H 0 1 N N N 13.814 12.869 66.687 -0.408 -1.409 -0.702 H11 1VL 28 
1VL H12 H12 H 0 1 N N N 11.570 10.973 67.507 -0.375 -1.240 2.346  H12 1VL 29 
1VL H13 H13 H 0 1 N N N 13.215 10.516 66.950 0.140  -2.637 1.370  H13 1VL 30 
1VL H16 H16 H 0 1 N N N 11.244 11.964 69.519 0.903  0.843  2.217  H16 1VL 31 
1VL H17 H17 H 0 1 N N N 12.631 12.402 70.573 2.326  0.925  1.150  H17 1VL 32 
1VL H18 H18 H 0 1 N N N 13.355 14.093 69.022 0.870  0.674  -0.831 H18 1VL 33 
1VL H19 H19 H 0 1 N N N 11.615 14.340 69.393 0.355  2.072  0.145  H19 1VL 34 
1VL C19 C19 C 0 1 N N N ?      ?      ?      2.060  -1.440 0.035  C19 1VL 35 
1VL C20 C20 C 0 1 Y N N ?      ?      ?      3.505  -1.012 0.046  C20 1VL 36 
1VL C21 C21 C 0 1 Y N N ?      ?      ?      4.463  -1.832 0.613  C21 1VL 37 
1VL C22 C22 C 0 1 Y N N ?      ?      ?      5.790  -1.444 0.625  C22 1VL 38 
1VL C23 C23 C 0 1 Y N N ?      ?      ?      6.163  -0.232 0.068  C23 1VL 39 
1VL C24 C24 C 0 1 Y N N ?      ?      ?      5.198  0.594  -0.503 C24 1VL 40 
1VL C25 C25 C 0 1 Y N N ?      ?      ?      3.871  0.196  -0.517 C25 1VL 41 
1VL O27 O27 O 0 1 N N N ?      ?      ?      5.811  1.718  -0.977 O27 1VL 42 
1VL O28 O28 O 0 1 N N N ?      ?      ?      7.380  0.375  -0.047 O28 1VL 43 
1VL C26 C26 C 0 1 N N N ?      ?      ?      7.211  1.388  -1.056 C26 1VL 44 
1VL H9  H9  H 0 1 N N N ?      ?      ?      2.004  -2.528 -0.004 H9  1VL 45 
1VL H14 H14 H 0 1 N N N ?      ?      ?      1.564  -1.019 -0.839 H14 1VL 46 
1VL H15 H15 H 0 1 N N N ?      ?      ?      4.174  -2.777 1.048  H15 1VL 47 
1VL H20 H20 H 0 1 N N N ?      ?      ?      6.536  -2.086 1.070  H20 1VL 48 
1VL H21 H21 H 0 1 N N N ?      ?      ?      3.121  0.835  -0.960 H21 1VL 49 
1VL H22 H22 H 0 1 N N N ?      ?      ?      7.457  0.993  -2.041 H22 1VL 50 
1VL H23 H23 H 0 1 N N N ?      ?      ?      7.823  2.261  -0.828 H23 1VL 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1VL C2  C1  DOUB Y N 1  
1VL C2  C3  SING Y N 2  
1VL C1  C6  SING Y N 3  
1VL C3  C4  DOUB Y N 4  
1VL C6  C7  SING N N 5  
1VL C6  C5  DOUB Y N 6  
1VL O11 C7  SING N N 7  
1VL C4  C5  SING Y N 8  
1VL C7  C8  SING N N 9  
1VL C5  N9  SING N N 10 
1VL C8  N9  SING N N 11 
1VL C8  O10 DOUB N N 12 
1VL N9  C12 SING N N 13 
1VL C14 N13 SING N N 14 
1VL C14 C15 SING N N 15 
1VL C12 N13 SING N N 16 
1VL N13 C18 SING N N 17 
1VL C15 N16 SING N N 18 
1VL N16 C17 SING N N 19 
1VL C18 C17 SING N N 20 
1VL C7  H1  SING N N 21 
1VL O11 H2  SING N N 22 
1VL C4  H3  SING N N 23 
1VL C3  H4  SING N N 24 
1VL C2  H5  SING N N 25 
1VL C1  H6  SING N N 26 
1VL C12 H7  SING N N 27 
1VL C12 H8  SING N N 28 
1VL C14 H10 SING N N 29 
1VL C14 H11 SING N N 30 
1VL C15 H12 SING N N 31 
1VL C15 H13 SING N N 32 
1VL C17 H16 SING N N 33 
1VL C17 H17 SING N N 34 
1VL C18 H18 SING N N 35 
1VL C18 H19 SING N N 36 
1VL N16 C19 SING N N 37 
1VL C19 C20 SING N N 38 
1VL C20 C21 SING Y N 39 
1VL C21 C22 DOUB Y N 40 
1VL C22 C23 SING Y N 41 
1VL C23 C24 DOUB Y N 42 
1VL C24 C25 SING Y N 43 
1VL C25 C20 DOUB Y N 44 
1VL C24 O27 SING N N 45 
1VL C23 O28 SING N N 46 
1VL O27 C26 SING N N 47 
1VL O28 C26 SING N N 48 
1VL C19 H9  SING N N 49 
1VL C19 H14 SING N N 50 
1VL C21 H15 SING N N 51 
1VL C22 H20 SING N N 52 
1VL C25 H21 SING N N 53 
1VL C26 H22 SING N N 54 
1VL C26 H23 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1VL SMILES           ACDLabs              12.01 "O=C2N(c1ccccc1C2O)CN3CCN(CC3)Cc4ccc5OCOc5c4"                                                                                                           
1VL InChI            InChI                1.03  "InChI=1S/C21H23N3O4/c25-20-16-3-1-2-4-17(16)24(21(20)26)13-23-9-7-22(8-10-23)12-15-5-6-18-19(11-15)28-14-27-18/h1-6,11,20,25H,7-10,12-14H2/t20-/m0/s1" 
1VL InChIKey         InChI                1.03  DHRNQNFHGGYALM-FQEVSTJZSA-N                                                                                                                             
1VL SMILES_CANONICAL CACTVS               3.385 "O[C@@H]1C(=O)N(CN2CCN(CC2)Cc3ccc4OCOc4c3)c5ccccc15"                                                                                                    
1VL SMILES           CACTVS               3.385 "O[CH]1C(=O)N(CN2CCN(CC2)Cc3ccc4OCOc4c3)c5ccccc15"                                                                                                      
1VL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)[C@@H](C(=O)N2CN3CCN(CC3)Cc4ccc5c(c4)OCO5)O"                                                                                                
1VL SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)C(C(=O)N2CN3CCN(CC3)Cc4ccc5c(c4)OCO5)O"                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1VL "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-3-hydroxy-1,3-dihydro-2H-indol-2-one" 
1VL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3S)-1-[[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl]-3-oxidanyl-3H-indol-2-one"            
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1VL "Create component" 2013-06-20 RCSB 
1VL "Initial release"  2014-04-16 RCSB 
# 
