data_05N
# 
_chem_comp.id                                    05N 
_chem_comp.name                                  "(3R,4R)-4-hydroxy-3-methyl-L-proline" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H11 N O3" 
_chem_comp.mon_nstd_parent_comp_id               PRO 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-10-25 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        145.156 
_chem_comp.one_letter_code                       P 
_chem_comp.three_letter_code                     05N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
05N N   N3  N 0 1 N N N Y Y N 2.651  -1.947 0.787  -0.017 1.566  -0.366 N3  05N 1  
05N CA  C19 C 0 1 N N S Y N N 2.058  -0.685 1.270  -0.468 0.154  -0.472 C19 05N 2  
05N C20 C20 C 0 1 N N R N N N 1.574  0.101  0.009  0.487  -0.630 0.453  C20 05N 3  
05N C21 C21 C 0 1 N N R N N N 1.873  -0.850 -1.183 1.759  0.238  0.545  C21 05N 4  
05N C   C22 C 0 1 N N N Y N Y 1.007  -0.963 2.242  -1.891 0.020  0.006  C22 05N 5  
05N O9  O9  O 0 1 N N N N N N 3.059  -0.515 -1.908 2.886  -0.478 0.036  O9  05N 6  
05N C52 C52 C 0 1 N N N N N N 2.047  -2.228 -0.521 1.465  1.474  -0.333 C52 05N 7  
05N C53 C53 C 0 1 N N N N N N 2.190  1.521  -0.122 0.817  -1.994 -0.156 C53 05N 8  
05N HA  H15 H 0 1 N N N Y N N 2.844  -0.087 1.754  -0.377 -0.198 -1.500 H15 05N 9  
05N H16 H16 H 0 1 N N N N N N 0.482  0.213  0.084  0.040  -0.755 1.440  H16 05N 10 
05N H17 H17 H 0 1 N N N N N N 1.000  -0.875 -1.851 1.937  0.541  1.577  H17 05N 11 
05N H40 H40 H 0 1 N N N N N N 3.181  -1.133 -2.619 3.715  0.019  0.068  H40 05N 12 
05N H41 H41 H 0 1 N N N N N N 2.710  -2.866 -1.124 1.860  1.328  -1.339 H41 05N 13 
05N H42 H42 H 0 1 N N N N N N 1.073  -2.724 -0.399 1.892  2.370  0.117  H42 05N 14 
05N H43 H43 H 0 1 N N N N N N 1.802  2.007  -1.029 1.296  -1.852 -1.125 H43 05N 15 
05N H44 H44 H 0 1 N N N N N N 1.919  2.121  0.759  1.491  -2.535 0.507  H44 05N 16 
05N H45 H45 H 0 1 N N N N N N 3.285  1.441  -0.189 -0.102 -2.565 -0.286 H45 05N 17 
05N H   H2  H 0 1 N Y N Y Y N 3.642  -1.848 0.694  -0.328 2.106  -1.160 H2  05N 18 
05N OXT O2  O 0 1 N Y N Y N Y 0.017  -1.620 1.932  -2.616 -1.056 -0.338 O2  05N 19 
05N O   O3  O 0 1 N Y N Y N Y 1.085  -0.549 3.389  -2.379 0.881  0.699  O3  05N 20 
05N HXT H11 H 0 1 N Y N Y N Y -0.558 -1.701 2.684  -3.524 -1.097 -0.008 H11 05N 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
05N N   CA  SING N N 1  
05N N   H   SING N N 2  
05N CA  C20 SING N N 3  
05N CA  C   SING N N 4  
05N CA  HA  SING N N 5  
05N C20 C53 SING N N 6  
05N C20 H16 SING N N 7  
05N C21 C20 SING N N 8  
05N C21 H17 SING N N 9  
05N C   OXT SING N N 10 
05N C   O   DOUB N N 11 
05N O9  C21 SING N N 12 
05N O9  H40 SING N N 13 
05N C52 N   SING N N 14 
05N C52 C21 SING N N 15 
05N C52 H41 SING N N 16 
05N C52 H42 SING N N 17 
05N C53 H43 SING N N 18 
05N C53 H44 SING N N 19 
05N C53 H45 SING N N 20 
05N OXT HXT SING N N 21 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
05N SMILES           ACDLabs              12.01 "O=C(O)C1NCC(O)C1C"                                                                    
05N InChI            InChI                1.03  "InChI=1S/C6H11NO3/c1-3-4(8)2-7-5(3)6(9)10/h3-5,7-8H,2H2,1H3,(H,9,10)/t3-,4-,5-/m0/s1" 
05N InChIKey         InChI                1.03  OKDDZUAFBARWMD-YUPRTTJUSA-N                                                            
05N SMILES_CANONICAL CACTVS               3.370 "C[C@H]1[C@@H](O)CN[C@@H]1C(O)=O"                                                      
05N SMILES           CACTVS               3.370 "C[CH]1[CH](O)CN[CH]1C(O)=O"                                                           
05N SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]1[C@H](CN[C@@H]1C(=O)O)O"                                                       
05N SMILES           "OpenEye OEToolkits" 1.7.6 "CC1C(CNC1C(=O)O)O"                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
05N "SYSTEMATIC NAME" ACDLabs              12.01 "(3R,4R)-4-hydroxy-3-methyl-L-proline"                         
05N "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R,4R)-3-methyl-4-oxidanyl-pyrrolidine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
05N "Create component"      2012-10-25 ?    
05N "Modify parent residue" 2012-10-26 ?    
05N "Initial release"       2012-12-21 RCSB 
05N "Other modification"    2019-04-14 PDBE 
05N "Modify backbone"       2023-11-03 PDBE 
# 
