data_CZO
# 
_chem_comp.id                                    CZO 
_chem_comp.name                                  "[(2R,4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-2-hydroxy-4-(4-hydroxybenzyl)-5-oxoimidazolidin-1-yl]acetic acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C15 H21 N3 O6" 
_chem_comp.mon_nstd_parent_comp_id               "GLY, TYR, GLY" 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-12-17 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        339.344 
_chem_comp.one_letter_code                       GYG 
_chem_comp.three_letter_code                     CZO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2QRF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CZO N1   N1   N 0 1 N N N Y Y N 23.590 3.757 34.321 1.483  -1.862 1.693  N1   CZO 1  
CZO CA1  CA1  C 0 1 N N S Y N N 24.563 4.856 34.082 1.773  -1.844 0.253  CA1  CZO 2  
CZO CB1  CB1  C 0 1 N N R N N N 25.691 5.107 35.056 1.028  -2.991 -0.432 CB1  CZO 3  
CZO CG1  CG1  C 0 1 N N N N N N 24.985 5.074 36.487 1.394  -4.313 0.247  CG1  CZO 4  
CZO OG1  OG1  O 0 1 N N N N N N 26.533 3.932 35.119 -0.380 -2.775 -0.327 OG1  CZO 5  
CZO C1   C1   C 0 1 N N R Y N N 25.069 5.110 32.632 1.314  -0.511 -0.342 C1   CZO 6  
CZO N2   N2   N 0 1 N N N Y N N 25.859 3.921 32.711 -0.136 -0.320 -0.107 N2   CZO 7  
CZO N3   N3   N 0 1 N N N Y N N 24.567 4.700 31.255 1.988  0.604  0.335  N3   CZO 8  
CZO C2   C2   C 0 1 N N N Y N N 25.787 4.160 30.503 1.098  1.585  0.586  C2   CZO 9  
CZO O2   O2   O 0 1 N N N Y N N 25.779 3.958 29.332 1.342  2.642  1.128  O2   CZO 10 
CZO CA2  CA2  C 0 1 N N S Y N N 26.721 3.902 31.523 -0.258 1.146  0.076  CA2  CZO 11 
CZO CA3  CA3  C 0 1 N N N Y N N 23.569 4.901 30.176 3.409  0.643  0.687  CA3  CZO 12 
CZO C3   C3   C 0 1 N N N Y N Y 23.383 6.410 29.742 4.192  1.244  -0.453 C3   CZO 13 
CZO O3   O3   O 0 1 N N N Y N Y 22.709 6.846 28.783 3.621  1.602  -1.455 O3   CZO 14 
CZO CB2  CB2  C 0 1 N N N N N N 27.383 2.688 31.128 -1.343 1.466  1.106  CB2  CZO 15 
CZO CG2  CG2  C 0 1 Y N N N N N 28.521 2.564 32.003 -2.684 1.028  0.575  CG2  CZO 16 
CZO CD1  CD1  C 0 1 Y N N N N N 28.353 2.421 33.391 -3.143 -0.251 0.830  CD1  CZO 17 
CZO CD2  CD2  C 0 1 Y N N N N N 29.821 2.585 31.465 -3.455 1.908  -0.162 CD2  CZO 18 
CZO CE1  CE1  C 0 1 Y N N N N N 29.423 2.294 34.313 -4.372 -0.655 0.344  CE1  CZO 19 
CZO CE2  CE2  C 0 1 Y N N N N N 30.878 2.458 32.407 -4.685 1.509  -0.650 CE2  CZO 20 
CZO CZ   CZ   C 0 1 Y N N N N N 30.718 2.314 33.784 -5.145 0.225  -0.400 CZ   CZO 21 
CZO OH   OH   O 0 1 N N N N N N 31.762 2.195 34.652 -6.354 -0.170 -0.879 OH   CZO 22 
CZO O1   O    O 0 1 N N N N N N 25.519 6.242 32.458 1.593  -0.477 -1.743 O    CZO 23 
CZO OXT  OXT  O 0 1 N Y N Y N Y 24.043 7.352 30.516 5.523  1.380  -0.354 OXT  CZO 24 
CZO H    HN1  H 0 1 N N N Y Y N 23.372 3.310 33.454 2.013  -1.154 2.178  HN1  CZO 25 
CZO H2   HN1A H 0 0 N Y N Y Y N 23.990 3.089 34.949 0.495  -1.755 1.865  HN1A CZO 26 
CZO HA1  HA1  H 0 1 N N N Y N N 23.796 5.609 34.314 2.845  -1.961 0.096  HA1  CZO 27 
CZO HB1  HB1  H 0 1 N N N N N N 26.245 6.018 34.786 1.312  -3.032 -1.484 HB1  CZO 28 
CZO HG1  HG1  H 0 1 N N N N N N 25.752 5.066 37.275 0.863  -5.131 -0.241 HG1  CZO 29 
CZO HG1A HG1A H 0 0 N N N N N N 24.350 5.964 36.603 2.468  -4.478 0.166  HG1A CZO 30 
CZO HG1B HG1B H 0 0 N N N N N N 24.366 4.168 36.569 1.110  -4.272 1.298  HG1B CZO 31 
CZO HOG1 HOG1 H 0 0 N N N N N N 26.718 3.627 34.239 -0.916 -3.466 -0.740 HOG1 CZO 32 
CZO HN2  HN2  H 0 1 N N N Y N N 26.414 3.927 33.543 -0.675 -0.632 -0.900 HN2  CZO 33 
CZO HA2  HA2  H 0 1 N N N Y N N 27.558 4.587 31.724 -0.481 1.630  -0.875 HA2  CZO 34 
CZO HA31 HA3  H 0 1 N N N Y N N 23.903 4.333 29.295 3.546  1.250  1.581  HA3  CZO 35 
CZO HA32 HA3A H 0 0 N N N Y N N 22.600 4.559 30.569 3.765  -0.370 0.877  HA3A CZO 36 
CZO HB2  HB2  H 0 1 N N N N N N 26.711 1.824 31.237 -1.130 0.937  2.035  HB2  CZO 37 
CZO HB2A HB2A H 0 0 N N N N N N 27.686 2.717 30.071 -1.360 2.539  1.294  HB2A CZO 38 
CZO HD1  HD1  H 0 1 N N N N N N 27.346 2.407 33.780 -2.541 -0.935 1.409  HD1  CZO 39 
CZO HD2  HD2  H 0 1 N N N N N N 30.004 2.691 30.406 -3.096 2.908  -0.356 HD2  CZO 40 
CZO HE1  HE1  H 0 1 N N N N N N 29.247 2.187 35.373 -4.730 -1.654 0.543  HE1  CZO 41 
CZO HE2  HE2  H 0 1 N N N N N N 31.888 2.474 32.024 -5.287 2.197  -1.224 HE2  CZO 42 
CZO HOH  HOH  H 0 1 N N N N N N 32.577 2.167 34.165 -7.091 0.002  -0.278 HOH  CZO 43 
CZO HXT  HOXT H 0 0 N Y N Y N Y 23.868 8.221 30.175 5.982  1.771  -1.110 HOXT CZO 44 
CZO HO1  HO   H 0 1 N N N N N N 25.635 6.670 33.298 1.324  0.344  -2.178 HO   CZO 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CZO N1  CA1  SING N N 1  
CZO CA1 CB1  SING N N 2  
CZO CA1 C1   SING N N 3  
CZO CB1 CG1  SING N N 4  
CZO CB1 OG1  SING N N 5  
CZO C1  N2   SING N N 6  
CZO C1  N3   SING N N 7  
CZO C1  O1   SING N N 8  
CZO N2  CA2  SING N N 9  
CZO N3  C2   SING N N 10 
CZO N3  CA3  SING N N 11 
CZO C2  O2   DOUB N N 12 
CZO C2  CA2  SING N N 13 
CZO CA2 CB2  SING N N 14 
CZO CA3 C3   SING N N 15 
CZO C3  O3   DOUB N N 16 
CZO C3  OXT  SING N N 17 
CZO CB2 CG2  SING N N 18 
CZO CG2 CD1  DOUB Y N 19 
CZO CG2 CD2  SING Y N 20 
CZO CD1 CE1  SING Y N 21 
CZO CD2 CE2  DOUB Y N 22 
CZO CE1 CZ   DOUB Y N 23 
CZO CE2 CZ   SING Y N 24 
CZO CZ  OH   SING N N 25 
CZO N1  H    SING N N 26 
CZO N1  H2   SING N N 27 
CZO CA1 HA1  SING N N 28 
CZO CB1 HB1  SING N N 29 
CZO CG1 HG1  SING N N 30 
CZO CG1 HG1A SING N N 31 
CZO CG1 HG1B SING N N 32 
CZO OG1 HOG1 SING N N 33 
CZO N2  HN2  SING N N 34 
CZO CA2 HA2  SING N N 35 
CZO CA3 HA31 SING N N 36 
CZO CA3 HA32 SING N N 37 
CZO CB2 HB2  SING N N 38 
CZO CB2 HB2A SING N N 39 
CZO CD1 HD1  SING N N 40 
CZO CD2 HD2  SING N N 41 
CZO CE1 HE1  SING N N 42 
CZO CE2 HE2  SING N N 43 
CZO OH  HOH  SING N N 44 
CZO OXT HXT  SING N N 45 
CZO O1  HO1  SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CZO SMILES           ACDLabs              10.04 "O=C1N(CC(=O)O)C(O)(NC1Cc2ccc(O)cc2)C(N)C(O)C"                                                                                                                    
CZO SMILES_CANONICAL CACTVS               3.341 "C[C@@H](O)[C@H](N)[C@@]1(O)N[C@@H](Cc2ccc(O)cc2)C(=O)N1CC(O)=O"                                                                                                  
CZO SMILES           CACTVS               3.341 "C[CH](O)[CH](N)[C]1(O)N[CH](Cc2ccc(O)cc2)C(=O)N1CC(O)=O"                                                                                                         
CZO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]([C@@H]([C@]1(N[C@H](C(=O)N1CC(=O)O)Cc2ccc(cc2)O)O)N)O"                                                                                                    
CZO SMILES           "OpenEye OEToolkits" 1.5.0 "CC(C(C1(NC(C(=O)N1CC(=O)O)Cc2ccc(cc2)O)O)N)O"                                                                                                                    
CZO InChI            InChI                1.03  "InChI=1S/C15H21N3O6/c1-8(19)13(16)15(24)17-11(14(23)18(15)7-12(21)22)6-9-2-4-10(20)5-3-9/h2-5,8,11,13,17,19-20,24H,6-7,16H2,1H3,(H,21,22)/t8-,11+,13+,15-/m1/s1" 
CZO InChIKey         InChI                1.03  ORRZHHDDNAQUJO-NALMLWMLSA-N                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CZO "SYSTEMATIC NAME" ACDLabs              10.04 "[(2R,4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-2-hydroxy-4-(4-hydroxybenzyl)-5-oxoimidazolidin-1-yl]acetic acid"               
CZO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[(2R,4S)-2-[(1S,2R)-1-amino-2-hydroxy-propyl]-2-hydroxy-4-[(4-hydroxyphenyl)methyl]-5-oxo-imidazolidin-1-yl]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CZO "Create component"     2008-12-17 RCSB 
CZO "Modify aromatic_flag" 2011-06-04 RCSB 
CZO "Modify descriptor"    2011-06-04 RCSB 
CZO "Modify backbone"      2023-11-03 PDBE 
# 
