data_L3O
# 
_chem_comp.id                                    L3O 
_chem_comp.name                                  "(2S,3S)-3-amino-2-hydroxy-5-methylhexanoic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C7 H15 N O3" 
_chem_comp.mon_nstd_parent_comp_id               LEU 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-05-03 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        161.199 
_chem_comp.one_letter_code                       L 
_chem_comp.three_letter_code                     L3O 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2WHB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L3O CZ   CZ   C 0 1 N N S Y N N 7.034  77.022 21.492 -1.098 -0.465 0.594  CZ   L3O 1  
L3O OZ   OZ   O 0 1 N N N N N N 6.687  75.642 21.467 -1.012 -1.877 0.390  OZ   L3O 2  
L3O CA   CA   C 0 1 N N S Y N N 8.496  77.193 21.961 0.113  0.217  -0.045 CA   L3O 3  
L3O CB   CB   C 0 1 N N N N N N 9.497  76.766 20.868 1.395  -0.314 0.598  CB   L3O 4  
L3O CG   CG   C 0 1 N N N N N N 10.909 77.284 21.124 2.609  0.310  -0.094 CG   L3O 5  
L3O CD1  CD1  C 0 1 N N N N N N 10.936 78.794 21.225 3.885  -0.106 0.642  CD1  L3O 6  
L3O CD2  CD2  C 0 1 N N N N N N 11.837 76.862 20.001 2.675  -0.176 -1.543 CD2  L3O 7  
L3O N    N    N 0 1 N N N Y Y N 8.806  76.468 23.210 0.024  1.668  0.164  N    L3O 8  
L3O C    C    C 0 1 N N N Y N Y 6.910  77.600 20.069 -2.362 0.058  -0.040 C    L3O 9  
L3O O    O    O 0 1 N N N Y N Y 7.209  78.786 19.894 -3.065 -0.683 -0.685 O    L3O 10 
L3O OXT  OXT  O 0 1 N Y N Y N Y 6.588  76.793 19.049 -2.705 1.346  0.112  OXT  L3O 11 
L3O HZ   HZ   H 0 1 N N N Y N N 6.359  77.547 22.184 -1.113 -0.253 1.663  HZ   L3O 12 
L3O HOZ  HA   H 0 1 N N N N N N 6.610  75.351 20.566 -0.994 -2.140 -0.541 HA   L3O 13 
L3O HA   HB   H 0 1 N N N Y N N 8.603  78.269 22.165 0.128  0.005  -1.114 HB   L3O 14 
L3O HB1C HB1C H 0 0 N N N N N N 9.531  75.667 20.839 1.406  -0.052 1.656  HB1C L3O 15 
L3O HB2C HB2C H 0 0 N N N N N N 9.153  77.195 19.915 1.434  -1.398 0.492  HB2C L3O 16 
L3O H    HN1  H 0 1 N N N Y Y N 8.876  75.489 23.019 0.107  1.898  1.144  HN1  L3O 17 
L3O H2   HN2  H 0 1 N Y N Y Y N 9.674  76.798 23.580 0.720  2.156  -0.381 HN2  L3O 18 
L3O HG   HG   H 0 1 N N N N N N 11.245 76.853 22.079 2.519  1.396  -0.078 HG   L3O 19 
L3O HD11 HD11 H 0 0 N N N N N N 10.943 79.091 22.284 4.754  0.266  0.100  HD11 L3O 20 
L3O HD12 HD12 H 0 0 N N N N N N 11.841 79.178 20.731 3.877  0.313  1.648  HD12 L3O 21 
L3O HD13 HD13 H 0 0 N N N N N N 10.044 79.210 20.733 3.932  -1.194 0.701  HD13 L3O 22 
L3O HD21 HD21 H 0 0 N N N N N N 11.262 76.760 19.069 1.766  0.120  -2.067 HD21 L3O 23 
L3O HD22 HD22 H 0 0 N N N N N N 12.620 77.623 19.867 3.540  0.268  -2.036 HD22 L3O 24 
L3O HD23 HD23 H 0 0 N N N N N N 12.302 75.897 20.253 2.766  -1.262 -1.559 HD23 L3O 25 
L3O HXT  HXT  H 0 1 N Y N Y N Y 6.633  77.279 18.234 -3.524 1.636  -0.313 HXT  L3O 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L3O CZ  OZ   SING N N 1  
L3O CZ  CA   SING N N 2  
L3O CZ  C    SING N N 3  
L3O CA  CB   SING N N 4  
L3O CA  N    SING N N 5  
L3O CB  CG   SING N N 6  
L3O CG  CD1  SING N N 7  
L3O CG  CD2  SING N N 8  
L3O C   O    DOUB N N 9  
L3O C   OXT  SING N N 10 
L3O CZ  HZ   SING N N 11 
L3O OZ  HOZ  SING N N 12 
L3O CA  HA   SING N N 13 
L3O CB  HB1C SING N N 14 
L3O CB  HB2C SING N N 15 
L3O N   H    SING N N 16 
L3O N   H2   SING N N 17 
L3O CG  HG   SING N N 18 
L3O CD1 HD11 SING N N 19 
L3O CD1 HD12 SING N N 20 
L3O CD1 HD13 SING N N 21 
L3O CD2 HD21 SING N N 22 
L3O CD2 HD22 SING N N 23 
L3O CD2 HD23 SING N N 24 
L3O OXT HXT  SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L3O SMILES           ACDLabs              10.04 "O=C(O)C(O)C(N)CC(C)C"                                                                  
L3O SMILES_CANONICAL CACTVS               3.352 "CC(C)C[C@H](N)[C@H](O)C(O)=O"                                                          
L3O SMILES           CACTVS               3.352 "CC(C)C[CH](N)[CH](O)C(O)=O"                                                            
L3O SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "CC(C)C[C@@H]([C@@H](C(=O)O)O)N"                                                        
L3O SMILES           "OpenEye OEToolkits" 1.6.1 "CC(C)CC(C(C(=O)O)O)N"                                                                  
L3O InChI            InChI                1.03  "InChI=1S/C7H15NO3/c1-4(2)3-5(8)6(9)7(10)11/h4-6,9H,3,8H2,1-2H3,(H,10,11)/t5-,6-/m0/s1" 
L3O InChIKey         InChI                1.03  GZLMFCWSEKVVGO-WDSKDSINSA-N                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
L3O "SYSTEMATIC NAME" ACDLabs              10.04 "(2S,3S)-3-amino-2-hydroxy-5-methylhexanoic acid"  
L3O "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,3S)-3-amino-2-hydroxy-5-methyl-hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L3O "Create component"       2009-05-03 EBI  
L3O "Modify descriptor"      2011-06-04 RCSB 
L3O "Modify one letter code" 2019-04-16 EBI  
L3O "Modify backbone"        2023-11-03 PDBE 
# 
