data_A1D5P
# 
_chem_comp.id                                    A1D5P 
_chem_comp.name                                  "(2~{R},3~{S})-2-azanyl-3-(4-hydroxyphenyl)-3-oxidanyl-propanoic acid" 
_chem_comp.type                                  "D-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H11 N O4" 
_chem_comp.mon_nstd_parent_comp_id               TYR 
_chem_comp.pdbx_synonyms                         "(betaS)-beta-hydroxy-D-tyrosine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-26 
_chem_comp.pdbx_modified_date                    2024-06-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        197.188 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1D5P 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8W6Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1D5P C   C1  C 0 1 N N N N Y Y -7.179 6.678 23.932 3.093  -0.208 -0.326 C   A1D5P 1  
A1D5P N   N1  N 0 1 N N N Y Y N -8.894 4.970 24.416 1.320  1.252  -1.118 N   A1D5P 2  
A1D5P O   O1  O 0 1 N N N N Y Y -6.770 7.300 22.958 3.753  0.791  -0.161 O   A1D5P 3  
A1D5P CA  C2  C 0 1 N N R N Y N -7.602 5.217 23.799 1.620  -0.098 -0.622 CA  A1D5P 4  
A1D5P CB  C3  C 0 1 N N S N N N -6.508 4.349 24.452 0.822  -0.360 0.657  CB  A1D5P 5  
A1D5P OB  O2  O 0 1 N N N N N N -7.032 3.027 24.530 1.182  0.604  1.649  OB  A1D5P 6  
A1D5P CG  C4  C 0 1 Y N N N N N -5.218 4.376 23.663 -0.652 -0.249 0.361  CG  A1D5P 7  
A1D5P OH  O3  O 0 1 N N N N N N -1.576 4.107 21.673 -4.686 0.053  -0.449 OH  A1D5P 8  
A1D5P CZ  C5  C 0 1 Y N N N N N -2.779 4.259 22.308 -3.357 -0.047 -0.182 CZ  A1D5P 9  
A1D5P CD1 C6  C 0 1 Y N N N N N -4.130 5.124 24.093 -1.405 -1.393 0.167  CD1 A1D5P 10 
A1D5P CD2 C7  C 0 1 Y N N N N N -5.065 3.575 22.541 -1.250 0.995  0.290  CD2 A1D5P 11 
A1D5P CE1 C8  C 0 1 Y N N N N N -2.916 5.070 23.426 -2.755 -1.294 -0.105 CE1 A1D5P 12 
A1D5P CE2 C9  C 0 1 Y N N N N N -3.860 3.512 21.865 -2.602 1.099  0.025  CE2 A1D5P 13 
A1D5P OXT O4  O 0 1 N Y N N Y Y -7.292 7.222 25.148 3.674  -1.416 -0.251 OXT A1D5P 14 
A1D5P H2  H1  H 0 1 N N N Y Y N -9.136 4.006 24.309 0.350  1.332  -1.385 H2  A1D5P 15 
A1D5P H   H2  H 0 1 N N N Y Y N -8.847 5.196 25.389 1.566  1.952  -0.434 H   A1D5P 16 
A1D5P HA  H4  H 0 1 N N N N Y N -7.652 4.964 22.730 1.345  -0.832 -1.378 HA  A1D5P 17 
A1D5P HB2 H5  H 0 1 N N N N N N -6.313 4.737 25.463 1.044  -1.361 1.026  HB2 A1D5P 18 
A1D5P HOB H6  H 0 1 N N N N N N -7.840 3.035 25.029 1.011  1.519  1.389  HOB A1D5P 19 
A1D5P HH  H7  H 0 1 N N N N N N -0.930 4.675 22.077 -5.247 0.051  0.338  HH  A1D5P 20 
A1D5P HD1 H8  H 0 1 N N N N N N -4.231 5.758 24.961 -0.936 -2.364 0.228  HD1 A1D5P 21 
A1D5P HD2 H9  H 0 1 N N N N N N -5.902 2.990 22.189 -0.660 1.887  0.442  HD2 A1D5P 22 
A1D5P HE1 H10 H 0 1 N N N N N N -2.079 5.657 23.775 -3.341 -2.188 -0.265 HE1 A1D5P 23 
A1D5P HE2 H11 H 0 1 N N N N N N -3.761 2.882 20.993 -3.068 2.071  -0.035 HE2 A1D5P 24 
A1D5P HXT H12 H 0 1 N N N N Y Y -7.012 8.129 25.117 4.622  -1.436 -0.063 HXT A1D5P 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1D5P OH  CZ  SING N N 1  
A1D5P CE2 CZ  DOUB Y N 2  
A1D5P CE2 CD2 SING Y N 3  
A1D5P CZ  CE1 SING Y N 4  
A1D5P CD2 CG  DOUB Y N 5  
A1D5P O   C   DOUB N N 6  
A1D5P CE1 CD1 DOUB Y N 7  
A1D5P CG  CD1 SING Y N 8  
A1D5P CG  CB  SING N N 9  
A1D5P CA  C   SING N N 10 
A1D5P CA  N   SING N N 11 
A1D5P CA  CB  SING N N 12 
A1D5P CB  OB  SING N N 13 
A1D5P C   OXT SING N N 14 
A1D5P N   H2  SING N N 15 
A1D5P N   H   SING N N 16 
A1D5P CA  HA  SING N N 17 
A1D5P CB  HB2 SING N N 18 
A1D5P OB  HOB SING N N 19 
A1D5P OH  HH  SING N N 20 
A1D5P CD1 HD1 SING N N 21 
A1D5P CD2 HD2 SING N N 22 
A1D5P CE1 HE1 SING N N 23 
A1D5P CE2 HE2 SING N N 24 
A1D5P OXT HXT SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1D5P InChI            InChI                1.06  "InChI=1S/C9H11NO4/c10-7(9(13)14)8(12)5-1-3-6(11)4-2-5/h1-4,7-8,11-12H,10H2,(H,13,14)/t7-,8+/m1/s1" 
A1D5P InChIKey         InChI                1.06  RKCRKDKQUDBXAU-SFYZADRCSA-N                                                                         
A1D5P SMILES_CANONICAL CACTVS               3.385 "N[C@H]([C@@H](O)c1ccc(O)cc1)C(O)=O"                                                                
A1D5P SMILES           CACTVS               3.385 "N[CH]([CH](O)c1ccc(O)cc1)C(O)=O"                                                                   
A1D5P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[C@@H]([C@H](C(=O)O)N)O)O"                                                                
A1D5P SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(C(C(=O)O)N)O)O"                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           A1D5P 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{S})-2-azanyl-3-(4-hydroxyphenyl)-3-oxidanyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1D5P "Create component" 2024-01-26 PDBC 
A1D5P "Initial release"  2024-06-12 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1D5P 
_pdbx_chem_comp_synonyms.name         "(betaS)-beta-hydroxy-D-tyrosine" 
_pdbx_chem_comp_synonyms.provenance   PUBCHEM 
_pdbx_chem_comp_synonyms.type         ? 
# 
