data_RIP
#

_chem_comp.id                                   RIP
_chem_comp.name                                 beta-D-ribopyranose
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C5 H10 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "beta-D-ribose; D-ribose; ribose; RIBOSE(PYRANOSE FORM)"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       150.130
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RIP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1DRK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  RIP  beta-D-ribose            PDB  ?  
2  RIP  D-ribose                 PDB  ?  
3  RIP  ribose                   PDB  ?  
4  RIP  "RIBOSE(PYRANOSE FORM)"  PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RIP  C1   C1   C  0  1  N  N  R  49.732  33.632  43.618   0.538   0.292  -1.219  C1   RIP   1  
RIP  C2   C2   C  0  1  N  N  R  49.036  33.099  44.894  -0.651  -0.575  -0.803  C2   RIP   2  
RIP  C3   C3   C  0  1  N  N  R  48.701  34.269  45.823  -0.960  -0.326   0.677  C3   RIP   3  
RIP  C4   C4   C  0  1  N  N  R  49.947  35.132  46.049   0.322  -0.541   1.489  C4   RIP   4  
RIP  C5   C5   C  0  1  N  N  N  50.577  35.563  44.747   1.438   0.324   0.899  C5   RIP   5  
RIP  O1   O1   O  0  1  N  Y  N  50.148  32.576  42.779   0.812   0.086  -2.606  O1   RIP   6  
RIP  O2   O2   O  0  1  N  N  N  47.840  32.383  44.582  -1.791  -0.235  -1.595  O2   RIP   7  
RIP  O3   O3   O  0  1  N  N  N  47.653  35.053  45.273  -1.419   1.015   0.852  O3   RIP   8  
RIP  O4   O4   O  0  1  N  N  N  49.611  36.278  46.764   0.095  -0.167   2.849  O4   RIP   9  
RIP  O5   O5   O  0  1  N  N  N  50.878  34.425  43.967   1.686  -0.061  -0.450  O5   RIP  10  
RIP  H1   H1   H  0  1  N  N  N  48.988  34.257  43.071   0.298   1.342  -1.049  H1   RIP  11  
RIP  H2   H2   H  0  1  N  N  N  49.738  32.395  45.398  -0.405  -1.627  -0.950  H2   RIP  12  
RIP  H3   H3   H  0  1  N  N  N  48.360  33.862  46.803  -1.729  -1.022   1.013  H3   RIP  13  
RIP  H4   H4   H  0  1  N  N  N  50.675  34.507  46.616   0.611  -1.591   1.442  H4   RIP  14  
RIP  H51  H51  H  0  1  N  N  N  49.942  36.295  44.195   1.138   1.371   0.927  H51  RIP  15  
RIP  H52  H52  H  0  1  N  N  N  51.469  36.211  44.906   2.347   0.192   1.486  H52  RIP  16  
RIP  HO1  HO1  H  0  1  N  Y  N  50.575  32.903  41.996   1.563   0.653  -2.829  HO1  RIP  17  
RIP  HO2  HO2  H  0  1  N  Y  N  47.412  32.055  45.365  -1.551  -0.402  -2.516  HO2  RIP  18  
RIP  HO3  HO3  H  0  1  N  Y  N  47.445  35.779  45.849  -1.601   1.128   1.795  HO3  RIP  19  
RIP  HO4  HO4  H  0  1  N  Y  N  50.383  36.813  46.904   0.926  -0.315   3.322  HO4  RIP  20  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RIP  C1  C2   SING  N  N   1  
RIP  C1  O1   SING  N  N   2  
RIP  C1  O5   SING  N  N   3  
RIP  C1  H1   SING  N  N   4  
RIP  C2  C3   SING  N  N   5  
RIP  C2  O2   SING  N  N   6  
RIP  C2  H2   SING  N  N   7  
RIP  C3  C4   SING  N  N   8  
RIP  C3  O3   SING  N  N   9  
RIP  C3  H3   SING  N  N  10  
RIP  C4  C5   SING  N  N  11  
RIP  C4  O4   SING  N  N  12  
RIP  C4  H4   SING  N  N  13  
RIP  C5  O5   SING  N  N  14  
RIP  C5  H51  SING  N  N  15  
RIP  C5  H52  SING  N  N  16  
RIP  O1  HO1  SING  N  N  17  
RIP  O2  HO2  SING  N  N  18  
RIP  O3  HO3  SING  N  N  19  
RIP  O4  HO4  SING  N  N  20  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RIP  SMILES            ACDLabs               10.04  "OC1C(O)COC(O)C1O"  
RIP  SMILES_CANONICAL  CACTVS                3.341  "O[C@@H]1CO[C@@H](O)[C@H](O)[C@@H]1O"  
RIP  SMILES            CACTVS                3.341  "O[CH]1CO[CH](O)[CH](O)[CH]1O"  
RIP  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1[C@H]([C@H]([C@H]([C@@H](O1)O)O)O)O"  
RIP  SMILES            "OpenEye OEToolkits"  1.5.0  "C1C(C(C(C(O1)O)O)O)O"  
RIP  InChI             InChI                 1.03   "InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4-,5-/m1/s1"  
RIP  InChIKey          InChI                 1.03   SRBFZHDQGSBBOR-TXICZTDVSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RIP  "SYSTEMATIC NAME"                      ACDLabs               10.04  beta-D-ribopyranose  
RIP  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "(2R,3R,4R,5R)-oxane-2,3,4,5-tetrol"  
RIP  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DRibpb  
RIP  "COMMON NAME"                          GMML                  1.0    b-D-ribopyranose  
RIP  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    b-D-Ribp  
RIP  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    Rib  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
RIP  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
RIP  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
RIP  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
RIP  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RIP  "Create component"    1999-07-08  RCSB  
RIP  "Modify descriptor"   2011-06-04  RCSB  
RIP  "Other modification"  2019-08-12  RCSB  
RIP  "Other modification"  2019-12-19  RCSB  
RIP  "Other modification"  2020-07-03  RCSB  
RIP  "Modify name"         2020-07-17  RCSB  
RIP  "Modify synonyms"     2020-07-17  RCSB  
##
