data_2LR
#

_chem_comp.id                                   2LR
_chem_comp.name                                 "N-[(benzyloxy)carbonyl]-L-leucyl-N-{(1R,2S)-1-hydroxy-4-methyl-1-[(2R)-2-methyloxiran-2-yl]pentan-2-yl}-L-leucinamide"
_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H47 N3 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "PHQ-LEU-LEU-LEU-EPOXYKETONE, unbound form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-11-28
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       533.700
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2LR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4NO9
_chem_comp.pdbx_subcomponent_list               "PHQ LEU LEU 2LS"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2LR  C7   C7   C  0  1  N  N  N   9.340  -163.407  31.814   -4.398  -0.345   0.636  C1    PHQ   1  
2LR  O8   O8   O  0  1  N  N  N   9.192  -162.208  32.055   -4.411  -0.932   1.700  O1    PHQ   2  
2LR  O6   O6   O  0  1  N  N  N  10.419  -163.845  31.090   -5.556   0.022   0.056  O2    PHQ   3  
2LR  C5   C5   C  0  1  N  N  N  11.501  -162.933  30.953   -6.781  -0.318   0.757  C2    PHQ   4  
2LR  C4   C4   C  0  1  Y  N  N  12.506  -163.393  31.820   -7.966   0.168  -0.037  C3    PHQ   5  
2LR  C31  C31  C  0  1  Y  N  N  13.539  -164.207  31.347   -8.465   1.440   0.174  C4    PHQ   6  
2LR  C32  C32  C  0  1  Y  N  N  14.536  -164.658  32.212   -9.552   1.886  -0.555  C5    PHQ   7  
2LR  C1   C1   C  0  1  Y  N  N  14.511  -164.299  33.559  -10.139   1.060  -1.495  C6    PHQ   8  
2LR  C2   C2   C  0  1  Y  N  N  13.485  -163.487  34.038   -9.640  -0.212  -1.707  C7    PHQ   9  
2LR  C3   C3   C  0  1  Y  N  N  12.489  -163.035  33.172   -8.551  -0.656  -0.981  C8    PHQ  10  
2LR  N9   N9   N  0  1  N  N  N   8.431  -164.300  32.255   -3.224  -0.055   0.041  N     LEU  11  
2LR  C10  C10  C  0  1  N  N  S   7.256  -163.892  33.052   -1.964  -0.448   0.675  CA    LEU  12  
2LR  C15  C15  C  0  1  N  N  N   7.659  -163.868  34.536   -0.859   0.462   0.204  C     LEU  13  
2LR  O30  O30  O  0  1  N  N  N   8.192  -164.848  35.058   -1.100   1.351  -0.585  O     LEU  14  
2LR  C11  C11  C  0  1  N  N  N   6.083  -164.861  32.836   -1.631  -1.893   0.296  CB    LEU  15  
2LR  C12  C12  C  0  1  N  N  N   5.331  -164.489  31.543   -2.689  -2.830   0.882  CG    LEU  16  
2LR  C13  C13  C  0  1  N  N  N   4.607  -165.717  30.959   -2.428  -4.259   0.401  CD1   LEU  17  
2LR  C14  C14  C  0  1  N  N  N   4.320  -163.370  31.833   -2.620  -2.786   2.410  CD2   LEU  18  
2LR  N16  N16  N  0  1  N  N  N   7.402  -162.710  35.172    0.398   0.287   0.658  N     LEU  19  
2LR  C17  C17  C  0  1  N  N  S   7.736  -162.477  36.591    1.492   1.098   0.118  CA    LEU  20  
2LR  C22  C22  C  0  1  N  N  N   6.469  -162.652  37.447    2.782   0.326   0.208  C     LEU  21  
2LR  O23  O23  O  0  1  N  N  N   5.349  -162.532  36.947    2.899  -0.567   1.020  O     LEU  22  
2LR  C18  C18  C  0  1  N  N  N   8.303  -161.046  36.733    1.614   2.391   0.927  CB    LEU  23  
2LR  C19  C19  C  0  1  N  N  N   9.822  -161.014  37.021    2.670   3.295   0.287  CG    LEU  24  
2LR  C20  C20  C  0  1  N  N  N  10.110  -161.481  38.459    2.173   3.772  -1.079  CD1   LEU  25  
2LR  C21  C21  C  0  1  N  N  N  10.614  -161.853  35.992    2.921   4.505   1.189  CD2   LEU  26  
2LR  C26  C26  C  0  1  N  N  N   5.812  -164.552  40.360    5.628  -0.228  -2.005  C26   2LS  27  
2LR  C28  C28  C  0  1  N  N  N   5.209  -166.981  40.313    5.194  -0.825  -4.392  C28   2LS  28  
2LR  C33  C33  C  0  1  N  N  R   5.529  -162.021  40.767    6.032   0.413   0.376  C33   2LS  29  
2LR  C34  C34  C  0  1  N  N  R   5.113  -160.756  39.968    7.056  -0.652   0.774  C34   2LS  30  
2LR  C45  C45  C  0  1  N  N  N   4.178  -160.434  39.031    7.285  -1.768  -0.247  C45   2LS  31  
2LR  O40  O40  O  0  1  N  N  N   6.177  -160.089  39.295    7.168  -0.983   2.160  O40   2LS  32  
2LR  C35  C35  C  0  1  N  N  N   5.577  -159.334  40.302    8.247  -0.212   1.628  C35   2LS  33  
2LR  O43  O43  O  0  1  N  N  N   6.792  -161.845  41.437    5.349   0.877   1.542  O43   2LS  34  
2LR  C25  C25  C  0  1  N  N  S   5.598  -163.163  39.720    5.022  -0.192  -0.601  C25   2LS  35  
2LR  C27  C27  C  0  1  N  N  N   4.706  -165.568  39.989    4.658  -0.923  -2.962  C27   2LS  36  
2LR  C29  C29  C  0  1  N  N  N   4.297  -165.518  38.503    4.520  -2.395  -2.569  C29   2LS  37  
2LR  N24  N24  N  0  1  N  N  N   6.693  -162.938  38.748    3.806   0.626  -0.615  N24   2LS  38  
2LR  H1   H1   H  0  1  N  N  N  11.865  -162.925  29.915   -6.843  -1.400   0.877  H21   PHQ  39  
2LR  H2   H2   H  0  1  N  N  N  11.185  -161.919  31.238   -6.782   0.157   1.738  H22   PHQ  40  
2LR  H47  H47  H  0  1  N  N  N  13.565  -164.489  30.305   -8.006   2.085   0.908  H41   PHQ  41  
2LR  H46  H46  H  0  1  N  N  N  15.330  -165.287  31.837   -9.942   2.879  -0.390  H51   PHQ  42  
2LR  H45  H45  H  0  1  N  N  N  15.283  -164.649  34.228  -10.989   1.408  -2.064  H61   PHQ  43  
2LR  H44  H44  H  0  1  N  N  N  13.461  -163.207  35.081  -10.100  -0.857  -2.441  H71   PHQ  44  
2LR  H43  H43  H  0  1  N  N  N  11.698  -162.403  33.549   -8.158  -1.648  -1.149  H81   PHQ  45  
2LR  H42  H42  H  0  1  N  N  N   8.556  -165.268  32.036   -3.214   0.415  -0.808  H     LEU  46  
2LR  H3   H3   H  0  1  N  N  N   6.941  -162.881  32.754   -2.062  -0.370   1.758  HA    LEU  47  
2LR  H36  H36  H  0  1  N  N  N   5.394  -164.797  33.691   -1.621  -1.990  -0.789  HB2   LEU  48  
2LR  H37  H37  H  0  1  N  N  N   6.468  -165.888  32.752   -0.652  -2.157   0.695  HB3   LEU  49  
2LR  H38  H38  H  0  1  N  N  N   6.060  -164.125  30.804   -3.679  -2.511   0.554  HG    LEU  50  
2LR  H4   H4   H  0  1  N  N  N   5.339  -166.512  30.755   -3.182  -4.926   0.818  HD11  LEU  51  
2LR  H5   H5   H  0  1  N  N  N   3.862  -166.081  31.682   -2.477  -4.290  -0.688  HD12  LEU  52  
2LR  H6   H6   H  0  1  N  N  N   4.102  -165.434  30.023   -1.439  -4.577   0.729  HD13  LEU  53  
2LR  H39  H39  H  0  1  N  N  N   4.846  -162.498  32.249   -1.630  -3.105   2.738  HD21  LEU  54  
2LR  H40  H40  H  0  1  N  N  N   3.815  -163.082  30.899   -2.806  -1.768   2.753  HD22  LEU  55  
2LR  H41  H41  H  0  1  N  N  N   3.574  -163.729  32.558   -3.374  -3.454   2.827  HD23  LEU  56  
2LR  H35  H35  H  0  1  N  N  N   6.964  -161.972  34.659    0.578  -0.376   1.343  H     LEU  57  
2LR  H7   H7   H  0  1  N  N  N   8.497  -163.199  36.922    1.285   1.340  -0.924  HA    LEU  58  
2LR  H32  H32  H  0  1  N  N  N   8.114  -160.501  35.796    0.654   2.906   0.937  HB2   LEU  59  
2LR  H33  H33  H  0  1  N  N  N   7.780  -160.544  37.561    1.910   2.154   1.949  HB3   LEU  60  
2LR  H34  H34  H  0  1  N  N  N  10.158  -159.970  36.932    3.598   2.737   0.161  HG    LEU  61  
2LR  H8   H8   H  0  1  N  N  N   9.534  -160.867  39.167    2.952   4.361  -1.564  HD11  LEU  62  
2LR  H9   H9   H  0  1  N  N  N   9.818  -162.536  38.567    1.930   2.909  -1.699  HD12  LEU  63  
2LR  H10  H10  H  0  1  N  N  N  11.184  -161.374  38.671    1.282   4.387  -0.947  HD13  LEU  64  
2LR  H11  H11  H  0  1  N  N  N  11.687  -161.806  36.228    3.276   4.164   2.162  HD21  LEU  65  
2LR  H12  H12  H  0  1  N  N  N  10.275  -162.899  36.033    3.674   5.148   0.733  HD22  LEU  66  
2LR  H13  H13  H  0  1  N  N  N  10.443  -161.451  34.982    1.994   5.063   1.315  HD23  LEU  67  
2LR  H14  H14  H  0  1  N  N  N   6.780  -164.949  40.020    5.810   0.791  -2.349  H14   2LS  68  
2LR  H15  H15  H  0  1  N  N  N   5.827  -164.435  41.454    6.570  -0.776  -1.981  H15   2LS  69  
2LR  H16  H16  H  0  1  N  N  N   5.505  -167.032  41.371    4.462  -1.243  -5.084  H16   2LS  70  
2LR  H17  H17  H  0  1  N  N  N   4.407  -167.709  40.121    5.374   0.220  -4.642  H17   2LS  71  
2LR  H18  H18  H  0  1  N  N  N   6.076  -167.216  39.678    6.127  -1.383  -4.469  H18   2LS  72  
2LR  H19  H19  H  0  1  N  N  N   4.739  -162.255  41.496    6.544   1.248  -0.102  H19   2LS  73  
2LR  H20  H20  H  0  1  N  N  N   3.204  -160.853  39.325    7.857  -2.572   0.215  H20   2LS  74  
2LR  H21  H21  H  0  1  N  N  N   4.098  -159.340  38.954    6.323  -2.154  -0.585  H21   2LS  75  
2LR  H22  H22  H  0  1  N  N  N   4.477  -160.849  38.057    7.837  -1.373  -1.100  H22   2LS  76  
2LR  H23  H23  H  0  1  N  N  N   6.115  -159.131  41.240    9.200  -0.716   1.468  H23   2LS  77  
2LR  H24  H24  H  0  1  N  N  N   4.946  -158.470  40.047    8.309   0.839   1.911  H24   2LS  78  
2LR  H25  H25  H  0  1  N  N  N   6.719  -161.141  42.071    4.870   0.185   2.018  H25   2LS  79  
2LR  H26  H26  H  0  1  N  N  N   4.641  -163.183  39.177    4.774  -1.205  -0.287  H26   2LS  80  
2LR  H27  H27  H  0  1  N  N  N   3.819  -165.360  40.605    3.683  -0.439  -2.906  H27   2LS  81  
2LR  H28  H28  H  0  1  N  N  N   3.934  -164.510  38.256    5.496  -2.879  -2.625  H28   2LS  82  
2LR  H29  H29  H  0  1  N  N  N   5.168  -165.758  37.875    4.139  -2.465  -1.550  H29   2LS  83  
2LR  H30  H30  H  0  1  N  N  N   3.498  -166.251  38.318    3.829  -2.891  -3.250  H30   2LS  84  
2LR  H31  H31  H  0  1  N  N  N   7.638  -163.001  39.069    3.739   1.385  -1.216  H31   2LS  85  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2LR  C5   O6   SING  N  N   1  
2LR  C5   C4   SING  N  N   2  
2LR  C13  C12  SING  N  N   3  
2LR  O6   C7   SING  N  N   4  
2LR  C31  C4   DOUB  Y  N   5  
2LR  C31  C32  SING  Y  N   6  
2LR  C12  C14  SING  N  N   7  
2LR  C12  C11  SING  N  N   8  
2LR  C7   O8   DOUB  N  N   9  
2LR  C7   N9   SING  N  N  10  
2LR  C4   C3   SING  Y  N  11  
2LR  C32  C1   DOUB  Y  N  12  
2LR  N9   C10  SING  N  N  13  
2LR  C11  C10  SING  N  N  14  
2LR  C10  C15  SING  N  N  15  
2LR  C3   C2   DOUB  Y  N  16  
2LR  C1   C2   SING  Y  N  17  
2LR  C15  O30  DOUB  N  N  18  
2LR  C15  N16  SING  N  N  19  
2LR  N16  C17  SING  N  N  20  
2LR  C21  C19  SING  N  N  21  
2LR  C17  C18  SING  N  N  22  
2LR  C17  C22  SING  N  N  23  
2LR  C18  C19  SING  N  N  24  
2LR  O23  C22  DOUB  N  N  25  
2LR  C19  C20  SING  N  N  26  
2LR  C22  N24  SING  N  N  27  
2LR  C29  C27  SING  N  N  28  
2LR  N24  C25  SING  N  N  29  
2LR  C45  C34  SING  N  N  30  
2LR  O40  C34  SING  N  N  31  
2LR  O40  C35  SING  N  N  32  
2LR  C25  C26  SING  N  N  33  
2LR  C25  C33  SING  N  N  34  
2LR  C34  C35  SING  N  N  35  
2LR  C34  C33  SING  N  N  36  
2LR  C27  C28  SING  N  N  37  
2LR  C27  C26  SING  N  N  38  
2LR  C33  O43  SING  N  N  39  
2LR  C5   H1   SING  N  N  40  
2LR  C5   H2   SING  N  N  41  
2LR  C10  H3   SING  N  N  42  
2LR  C13  H4   SING  N  N  43  
2LR  C13  H5   SING  N  N  44  
2LR  C13  H6   SING  N  N  45  
2LR  C17  H7   SING  N  N  46  
2LR  C20  H8   SING  N  N  47  
2LR  C20  H9   SING  N  N  48  
2LR  C20  H10  SING  N  N  49  
2LR  C21  H11  SING  N  N  50  
2LR  C21  H12  SING  N  N  51  
2LR  C21  H13  SING  N  N  52  
2LR  C26  H14  SING  N  N  53  
2LR  C26  H15  SING  N  N  54  
2LR  C28  H16  SING  N  N  55  
2LR  C28  H17  SING  N  N  56  
2LR  C28  H18  SING  N  N  57  
2LR  C33  H19  SING  N  N  58  
2LR  C45  H20  SING  N  N  59  
2LR  C45  H21  SING  N  N  60  
2LR  C45  H22  SING  N  N  61  
2LR  C35  H23  SING  N  N  62  
2LR  C35  H24  SING  N  N  63  
2LR  O43  H25  SING  N  N  64  
2LR  C25  H26  SING  N  N  65  
2LR  C27  H27  SING  N  N  66  
2LR  C29  H28  SING  N  N  67  
2LR  C29  H29  SING  N  N  68  
2LR  C29  H30  SING  N  N  69  
2LR  N24  H31  SING  N  N  70  
2LR  C18  H32  SING  N  N  71  
2LR  C18  H33  SING  N  N  72  
2LR  C19  H34  SING  N  N  73  
2LR  N16  H35  SING  N  N  74  
2LR  C11  H36  SING  N  N  75  
2LR  C11  H37  SING  N  N  76  
2LR  C12  H38  SING  N  N  77  
2LR  C14  H39  SING  N  N  78  
2LR  C14  H40  SING  N  N  79  
2LR  C14  H41  SING  N  N  80  
2LR  N9   H42  SING  N  N  81  
2LR  C3   H43  SING  N  N  82  
2LR  C2   H44  SING  N  N  83  
2LR  C1   H45  SING  N  N  84  
2LR  C32  H46  SING  N  N  85  
2LR  C31  H47  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2LR  SMILES            ACDLabs               12.01  "O=C(OCc1ccccc1)NC(C(=O)NC(C(=O)NC(C(O)C2(OC2)C)CC(C)C)CC(C)C)CC(C)C"  
2LR  InChI             InChI                 1.03   "InChI=1S/C29H47N3O6/c1-18(2)13-22(25(33)29(7)17-38-29)30-26(34)23(14-19(3)4)31-27(35)24(15-20(5)6)32-28(36)37-16-21-11-9-8-10-12-21/h8-12,18-20,22-25,33H,13-17H2,1-7H3,(H,30,34)(H,31,35)(H,32,36)/t22-,23-,24-,25+,29+/m0/s1"  
2LR  InChIKey          InChI                 1.03   HBAZSHAOSQCUFB-ABJYOQOBSA-N  
2LR  SMILES_CANONICAL  CACTVS                3.370  "CC(C)C[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc1ccccc1)[C@@H](O)[C@@]2(C)CO2"  
2LR  SMILES            CACTVS                3.370  "CC(C)C[CH](NC(=O)[CH](CC(C)C)NC(=O)[CH](CC(C)C)NC(=O)OCc1ccccc1)[CH](O)[C]2(C)CO2"  
2LR  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(C)C[C@@H]([C@H]([C@]1(CO1)C)O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc2ccccc2"  
2LR  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(C)CC(C(C1(CO1)C)O)NC(=O)C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)OCc2ccccc2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2LR  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(benzyloxy)carbonyl]-L-leucyl-N-{(1R,2S)-1-hydroxy-4-methyl-1-[(2R)-2-methyloxiran-2-yl]pentan-2-yl}-L-leucinamide"  
2LR  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(phenylmethyl) N-[(2S)-4-methyl-1-[[(2S)-4-methyl-1-[[(1R,2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxidanyl-pentan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2LR  "Create component"  2013-11-28  RCSB  
2LR  "Initial release"   2014-02-12  RCSB  
2LR  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2LR
_pdbx_chem_comp_synonyms.name        "PHQ-LEU-LEU-LEU-EPOXYKETONE, unbound form"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
