data_Q6R
# 
_chem_comp.id                                    Q6R 
_chem_comp.name                                  "(R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-chloro-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H16 Cl N3 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         cefaclor 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-24 
_chem_comp.pdbx_modified_date                    2024-05-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        385.823 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Q6R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8ISR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Q6R C10  C1  C  0 1 Y N N N N N 6.992  6.340  -33.627 -4.552 2.939  0.171  C10  Q6R 1  
Q6R C13  C2  C  0 1 N N R N N N 10.648 1.458  -33.351 -0.261 -1.112 -0.238 C13  Q6R 2  
Q6R C15  C3  C  0 1 N N N N N N 7.619  1.138  -29.806 4.376  -0.090 -1.364 C15  Q6R 3  
Q6R C01  C4  C  0 1 Y N N N N N 7.435  5.333  -34.473 -4.145 1.742  0.731  C01  Q6R 4  
Q6R C02  C5  C  0 1 N N R N N N 10.837 1.841  -31.881 0.788  -0.002 -0.137 C02  Q6R 5  
Q6R C03  C6  C  0 1 Y N N N N N 8.760  5.294  -34.893 -4.402 0.551  0.078  C03  Q6R 6  
Q6R C04  C7  C  0 1 Y N N N N N 9.651  6.260  -34.449 -5.066 0.556  -1.134 C04  Q6R 7  
Q6R C05  C8  C  0 1 N N N N N N 9.215  4.220  -31.599 2.458  1.602  1.464  C05  Q6R 8  
Q6R C06  C9  C  0 1 Y N N N N N 9.203  7.269  -33.602 -5.473 1.753  -1.694 C06  Q6R 9  
Q6R C07  C10 C  0 1 N N N N N N 8.396  3.310  -30.724 3.466  1.115  0.463  C07  Q6R 10 
Q6R C08  C11 C  0 1 Y N N N N N 7.874  7.315  -33.191 -5.216 2.944  -1.042 C08  Q6R 11 
Q6R C09  C12 C  0 1 N N N N N N 8.522  1.981  -30.707 3.244  0.224  -0.478 C09  Q6R 12 
Q6R C11  C13 C  0 1 N N R N N N 9.241  4.160  -35.799 -3.958 -0.753 0.688  C11  Q6R 13 
Q6R C12  C14 C  0 1 N N N N N N 10.210 3.286  -34.998 -2.681 -1.207 0.030  C12  Q6R 14 
Q6R C14  C15 C  0 1 N N N N N N 10.097 0.030  -33.431 0.249  -2.350 0.454  C14  Q6R 15 
Q6R N17  N1  N  0 1 N N N N N N 9.974  4.640  -36.965 -5.001 -1.768 0.487  N17  Q6R 16 
Q6R N18  N2  N  0 1 N N N N N N 9.710  2.297  -34.069 -1.503 -0.670 0.402  N18  Q6R 17 
Q6R N19  N3  N  0 1 N N N N N N 9.754  1.279  -31.073 2.055  -0.455 -0.729 N19  Q6R 18 
Q6R O20  O1  O  0 1 N N N N N N 11.381 3.412  -35.145 -2.714 -2.056 -0.836 O20  Q6R 19 
Q6R O21  O2  O  0 1 N N N N N N 8.923  -0.171 -33.447 -0.362 -2.816 1.386  O21  Q6R 20 
Q6R O22  O3  O  0 1 N N N N N N 6.379  1.331  -29.767 5.410  0.544  -1.277 O22  Q6R 21 
Q6R O23  O4  O  0 1 N N N N N N 8.121  0.227  -29.099 4.268  -1.080 -2.272 O23  Q6R 22 
Q6R S24  S1  S  0 1 N N N N N N 10.904 3.642  -31.639 1.118  0.381  1.614  S24  Q6R 23 
Q6R CL16 CL1 CL 0 0 N N N N N N 6.899  4.094  -30.180 5.063  1.789  0.556  CL16 Q6R 24 
Q6R H1   H1  H  0 1 N N N N N N 5.960  6.363  -33.309 -4.355 3.869  0.682  H1   Q6R 25 
Q6R H2   H2  H  0 1 N N N N N N 11.628 1.485  -33.850 -0.453 -1.335 -1.288 H2   Q6R 26 
Q6R H3   H3  H  0 1 N N N N N N 6.745  4.573  -34.808 -3.626 1.738  1.678  H3   Q6R 27 
Q6R H4   H4  H  0 1 N N N N N N 11.805 1.453  -31.531 0.434  0.891  -0.652 H4   Q6R 28 
Q6R H5   H5  H  0 1 N N N N N N 10.685 6.229  -34.759 -5.266 -0.374 -1.644 H5   Q6R 29 
Q6R H6   H6  H  0 1 N N N N N N 9.186  5.242  -31.194 2.941  1.733  2.432  H6   Q6R 30 
Q6R H7   H7  H  0 1 N N N N N N 8.802  4.218  -32.619 2.046  2.554  1.131  H7   Q6R 31 
Q6R H8   H8  H  0 1 N N N N N N 9.894  8.025  -33.260 -5.992 1.757  -2.641 H8   Q6R 32 
Q6R H10  H10 H  0 1 N N N N N N 7.533  8.104  -32.537 -5.537 3.879  -1.477 H10  Q6R 33 
Q6R H12  H12 H  0 1 N N N N N N 8.379  3.554  -36.113 -3.787 -0.615 1.756  H12  Q6R 34 
Q6R H14  H14 H  0 1 N N N N N N 9.376  5.218  -37.520 -5.178 -1.914 -0.496 H14  Q6R 35 
Q6R H15  H15 H  0 1 N N N N N N 10.767 5.171  -36.665 -4.755 -2.634 0.943  H15  Q6R 36 
Q6R H17  H17 H  0 1 N N N N N N 8.726  2.193  -33.923 -1.476 0.008  1.095  H17  Q6R 37 
Q6R H18  H18 H  0 1 N N N N N N 9.457  0.458  -31.561 2.062  -1.238 -1.302 H18  Q6R 38 
Q6R H20  H20 H  0 1 N N N N N N 7.434  -0.208 -28.607 5.038  -1.249 -2.832 H20  Q6R 39 
Q6R O1   O5  O  0 1 N N N N N N 10.879 -0.860 -32.738 1.382  -2.935 0.034  O1   Q6R 40 
Q6R H9   H9  H  0 1 N N N N N N 10.330 -1.536 -32.358 1.669  -3.727 0.509  H9   Q6R 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Q6R N17 C11  SING N N 1  
Q6R C11 C12  SING N N 2  
Q6R C11 C03  SING N N 3  
Q6R O20 C12  DOUB N N 4  
Q6R C12 N18  SING N N 5  
Q6R C03 C01  DOUB Y N 6  
Q6R C03 C04  SING Y N 7  
Q6R C01 C10  SING Y N 8  
Q6R C04 C06  DOUB Y N 9  
Q6R N18 C13  SING N N 10 
Q6R C10 C08  DOUB Y N 11 
Q6R C06 C08  SING Y N 12 
Q6R O21 C14  DOUB N N 13 
Q6R C14 C13  SING N N 14 
Q6R C13 C02  SING N N 15 
Q6R C02 S24  SING N N 16 
Q6R C02 N19  SING N N 17 
Q6R S24 C05  SING N N 18 
Q6R C05 C07  SING N N 19 
Q6R N19 C09  SING N N 20 
Q6R C07 C09  DOUB N N 21 
Q6R C07 CL16 SING N N 22 
Q6R C09 C15  SING N N 23 
Q6R C15 O22  DOUB N N 24 
Q6R C15 O23  SING N N 25 
Q6R C10 H1   SING N N 26 
Q6R C13 H2   SING N N 27 
Q6R C01 H3   SING N N 28 
Q6R C02 H4   SING N N 29 
Q6R C04 H5   SING N N 30 
Q6R C05 H6   SING N N 31 
Q6R C05 H7   SING N N 32 
Q6R C06 H8   SING N N 33 
Q6R C08 H10  SING N N 34 
Q6R C11 H12  SING N N 35 
Q6R N17 H14  SING N N 36 
Q6R N17 H15  SING N N 37 
Q6R N18 H17  SING N N 38 
Q6R N19 H18  SING N N 39 
Q6R O23 H20  SING N N 40 
Q6R C14 O1   SING N N 41 
Q6R O1  H9   SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Q6R InChI            InChI                1.06  "InChI=1S/C15H16ClN3O5S/c16-8-6-25-13(19-10(8)14(21)22)11(15(23)24)18-12(20)9(17)7-4-2-1-3-5-7/h1-5,9,11,13,19H,6,17H2,(H,18,20)(H,21,22)(H,23,24)/t9-,11+,13-/m1/s1" 
Q6R InChIKey         InChI                1.06  BPKRUZRKWSLICC-SUZMYJTESA-N                                                                                                                                           
Q6R SMILES_CANONICAL CACTVS               3.385 "N[C@@H](C(=O)N[C@@H]([C@@H]1NC(=C(Cl)CS1)C(O)=O)C(O)=O)c2ccccc2"                                                                                                     
Q6R SMILES           CACTVS               3.385 "N[CH](C(=O)N[CH]([CH]1NC(=C(Cl)CS1)C(O)=O)C(O)=O)c2ccccc2"                                                                                                           
Q6R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H](C(=O)N[C@@H]([C@@H]2NC(=C(CS2)Cl)C(=O)O)C(=O)O)N"                                                                                                    
Q6R SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(C(=O)NC(C2NC(=C(CS2)Cl)C(=O)O)C(=O)O)N"                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           Q6R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R})-2-[(1~{R})-1-[[(2~{R})-2-azanyl-2-phenyl-ethanoyl]amino]-2-oxidanyl-2-oxidanylidene-ethyl]-5-chloranyl-3,6-dihydro-2~{H}-1,3-thiazine-4-carboxylic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      Q6R 
_pdbx_chem_comp_synonyms.name         cefaclor 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Q6R "Create component" 2023-03-24 PDBJ 
Q6R "Modify name"      2023-03-27 PDBJ 
Q6R "Initial release"  2024-05-15 RCSB 
# 
