data_RER
#

_chem_comp.id                                   RER
_chem_comp.name                                 vancosamine
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H15 N O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(1R,3S,4S,5S)-3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-09-06
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       161.199
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RER
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1C0Q
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     RER
_pdbx_chem_comp_synonyms.name        "(1R,3S,4S,5S)-3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RER  C1    C1    C  0  1  N  N  R  2.594  14.501  6.233   0.046  -1.527  -0.832  C1    RER   1  
RER  C2    C2    C  0  1  N  N  N  2.501  13.967  7.633  -1.069  -0.504  -1.061  C2    RER   2  
RER  C3    C3    C  0  1  N  N  S  3.042  12.546  7.655  -1.142   0.439   0.144  C3    RER   3  
RER  N3    N3    N  0  1  N  N  N  3.461  12.299  9.115  -2.159   1.470  -0.100  N3    RER   4  
RER  C3A   C3A   C  0  1  N  N  N  2.074  11.505  7.356  -1.512  -0.359   1.397  C3A   RER   5  
RER  C4    C4    C  0  1  N  N  S  4.271  12.456  6.823   0.224   1.103   0.342  C4    RER   6  
RER  O4    O4    O  0  1  N  N  N  5.133  13.449  7.548   0.537   1.900  -0.802  O4    RER   7  
RER  C5    C5    C  0  1  N  N  S  3.976  12.831  5.381   1.290   0.018   0.516  C5    RER   8  
RER  O5    O5    O  0  1  N  N  N  3.608  14.232  5.409   1.283  -0.842  -0.624  O5    RER   9  
RER  C5A   C5A   C  0  1  N  N  N  5.146  12.716  4.425   2.666   0.672   0.654  C5A   RER  10  
RER  O1    O1    O  0  1  N  Y  N  1.264  13.926  5.606  -0.260  -2.317   0.319  O1    RER  11  
RER  H1    H1    H  0  1  N  N  N  2.763  15.584  6.330   0.131  -2.174  -1.705  H1    RER  12  
RER  H21C  H21C  H  0  0  N  N  N  3.094  14.599  8.310  -0.857   0.071  -1.962  H21C  RER  13  
RER  H22C  H22C  H  0  0  N  N  N  1.452  13.971  7.964  -2.021  -1.023  -1.175  H22C  RER  14  
RER  HO1   HO1   H  0  1  N  N  N  0.615  13.811  6.290   0.406  -2.988   0.524  HO1   RER  15  
RER  H31N  H31N  H  0  0  N  N  N  4.458  12.245  9.172  -3.068   1.055  -0.240  H31N  RER  16  
RER  H32N  H32N  H  0  0  N  N  N  3.135  13.051  9.687  -2.181   2.141   0.653  H32N  RER  17  
RER  H3A1  H3A1  H  0  0  N  N  N  1.829  11.528  6.284  -0.677  -1.001   1.678  H3A1  RER  18  
RER  H3A2  H3A2  H  0  0  N  N  N  2.499  10.524  7.614  -1.732   0.329   2.213  H3A2  RER  19  
RER  H3A3  H3A3  H  0  0  N  N  N  1.160  11.675  7.944  -2.388  -0.973   1.191  H3A3  RER  20  
RER  H4    H4    H  0  1  N  N  N  4.730  11.461  6.727   0.197   1.735   1.230  H4    RER  21  
RER  HO4   HO4   H  0  1  N  N  N  5.315  13.131  8.424   1.390   2.352  -0.745  HO4   RER  22  
RER  H5    H5    H  0  1  N  N  N  3.206  12.135  5.016   1.072  -0.564   1.412  H5    RER  23  
RER  H5A1  H5A1  H  0  0  N  N  N  4.773  12.688  3.390   2.670   1.329   1.524  H5A1  RER  24  
RER  H5A2  H5A2  H  0  0  N  N  N  5.810  13.584  4.552   3.425  -0.100   0.779  H5A2  RER  25  
RER  H5A3  H5A3  H  0  0  N  N  N  5.704  11.792  4.638   2.883   1.254  -0.241  H5A3  RER  26  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RER  C1   C2    SING  N  N   1  
RER  C1   O5    SING  N  N   2  
RER  C1   O1    SING  N  N   3  
RER  C2   C3    SING  N  N   4  
RER  C3   N3    SING  N  N   5  
RER  C3   C3A   SING  N  N   6  
RER  C3   C4    SING  N  N   7  
RER  C4   O4    SING  N  N   8  
RER  C4   C5    SING  N  N   9  
RER  C5   O5    SING  N  N  10  
RER  C5   C5A   SING  N  N  11  
RER  C1   H1    SING  N  N  12  
RER  C2   H21C  SING  N  N  13  
RER  C2   H22C  SING  N  N  14  
RER  O1   HO1   SING  N  N  15  
RER  N3   H31N  SING  N  N  16  
RER  N3   H32N  SING  N  N  17  
RER  C3A  H3A1  SING  N  N  18  
RER  C3A  H3A2  SING  N  N  19  
RER  C3A  H3A3  SING  N  N  20  
RER  C4   H4    SING  N  N  21  
RER  O4   HO4   SING  N  N  22  
RER  C5   H5    SING  N  N  23  
RER  C5A  H5A1  SING  N  N  24  
RER  C5A  H5A2  SING  N  N  25  
RER  C5A  H5A3  SING  N  N  26  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RER  SMILES            ACDLabs               10.04  "OC1OC(C(O)C(N)(C)C1)C"  
RER  SMILES_CANONICAL  CACTVS                3.352  "C[C@@H]1O[C@@H](O)C[C@](C)(N)[C@@H]1O"  
RER  SMILES            CACTVS                3.352  "C[CH]1O[CH](O)C[C](C)(N)[CH]1O"  
RER  SMILES_CANONICAL  "OpenEye OEToolkits"  1.6.1  "C[C@H]1[C@H]([C@@](C[C@@H](O1)O)(C)N)O"  
RER  SMILES            "OpenEye OEToolkits"  1.6.1  "CC1C(C(CC(O1)O)(C)N)O"  
RER  InChI             InChI                 1.03   "InChI=1S/C7H15NO3/c1-4-6(10)7(2,8)3-5(9)11-4/h4-6,9-10H,3,8H2,1-2H3/t4-,5+,6+,7-/m0/s1"  
RER  InChIKey          InChI                 1.03   OIJZDPGKNVKVBL-WNJXEPBRSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RER  "SYSTEMATIC NAME"  ACDLabs               10.04  "3-amino-2,3,6-trideoxy-3-methyl-alpha-L-lyxo-hexopyranose"  
RER  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(2R,4S,5S,6S)-4-amino-4,6-dimethyl-oxane-2,5-diol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
RER  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
RER  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
RER  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
RER  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RER  "Create component"     2010-09-06  EBI   
RER  "Modify descriptor"    2011-06-04  RCSB  
RER  "Other modification"   2020-07-03  RCSB  
RER  "Modify name"          2020-07-17  RCSB  
RER  "Modify synonyms"      2020-07-17  RCSB  
RER  "Modify linking type"  2020-07-17  RCSB  
##
