data_V8U
# 
_chem_comp.id                                    V8U 
_chem_comp.name                                  "3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H38 N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-27 
_chem_comp.pdbx_modified_date                    2024-02-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        586.678 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V8U 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V8U O2A O1  O 0 1 N N N N N N ? ? ? -0.908 4.926  -0.457 O2A V8U 1  
V8U C1A C1  C 0 1 Y N N N N N ? ? ? 1.009  0.317  0.373  C1A V8U 2  
V8U C2A C2  C 0 1 Y N N N N N ? ? ? 1.228  1.372  -0.438 C2A V8U 3  
V8U C3A C3  C 0 1 Y N N N N N ? ? ? 2.407  1.108  -1.163 C3A V8U 4  
V8U C4A C4  C 0 1 Y N N N N N ? ? ? 2.863  -0.098 -0.768 C4A V8U 5  
V8U C1B C5  C 0 1 N N N N N N ? ? ? 5.302  -0.297 -0.510 C1B V8U 6  
V8U C2B C6  C 0 1 N N N N N N ? ? ? 6.629  -0.733 -0.729 C2B V8U 7  
V8U C3B C7  C 0 1 N N N N N N ? ? ? 7.428  -0.067 0.157  C3B V8U 8  
V8U C4B C8  C 0 1 N N N N N N ? ? ? 6.494  0.814  0.942  C4B V8U 9  
V8U C1C C9  C 0 1 N N N N N N ? ? ? -6.804 -0.511 1.559  C1C V8U 10 
V8U C2C C10 C 0 1 N N N N N N ? ? ? -7.788 -0.081 0.520  C2C V8U 11 
V8U C3C C11 C 0 1 N N N N N N ? ? ? -7.078 0.101  -0.603 C3C V8U 12 
V8U C4C C12 C 0 1 N N N N N N ? ? ? -5.670 -0.211 -0.270 C4C V8U 13 
V8U C1D C13 C 0 1 Y N N N N N ? ? ? -3.243 -0.531 -0.518 C1D V8U 14 
V8U C2D C14 C 0 1 Y N N N N N ? ? ? -2.792 -1.789 -0.337 C2D V8U 15 
V8U C3D C15 C 0 1 Y N N N N N ? ? ? -1.579 -1.704 0.375  C3D V8U 16 
V8U C4D C16 C 0 1 Y N N N N N ? ? ? -1.335 -0.397 0.602  C4D V8U 17 
V8U O2D O2  O 0 1 N N N N N N ? ? ? 2.139  -4.778 -0.677 O2D V8U 18 
V8U CGD C17 C 0 1 N N N N N N ? ? ? 1.170  -4.328 0.134  CGD V8U 19 
V8U O1D O3  O 0 1 N N N N N N ? ? ? 0.990  -4.851 1.209  O1D V8U 20 
V8U CBD C18 C 0 1 N N N N N N ? ? ? 0.304  -3.171 -0.295 CBD V8U 21 
V8U CAD C19 C 0 1 N N N N N N ? ? ? -0.714 -2.861 0.804  CAD V8U 22 
V8U CMD C20 C 0 1 N N N N N N ? ? ? -3.462 -3.054 -0.809 CMD V8U 23 
V8U CHD C21 C 0 1 N N N N N N ? ? ? -4.512 -0.142 -1.232 CHD V8U 24 
V8U CAC C22 C 0 1 N N N N N N ? ? ? -7.610 0.537  -1.944 CAC V8U 25 
V8U CBC C23 C 0 1 N N N N N N ? ? ? -7.456 2.053  -2.085 CBC V8U 26 
V8U CMC C24 C 0 1 N N N N N N ? ? ? -9.273 0.108  0.697  CMC V8U 27 
V8U OC  O4  O 0 1 N N N N N N ? ? ? -7.055 -0.778 2.711  OC  V8U 28 
V8U NC  N1  N 0 1 N N N N N N ? ? ? -5.589 -0.553 0.983  NC  V8U 29 
V8U ND  N2  N 0 1 Y N N N N N ? ? ? -2.356 0.327  0.061  ND  V8U 30 
V8U CHA C25 C 0 1 N N N N N N ? ? ? -0.143 0.165  1.333  CHA V8U 31 
V8U CAA C26 C 0 1 N N N N N N ? ? ? 0.370  2.605  -0.549 CAA V8U 32 
V8U CBA C27 C 0 1 N N N N N N ? ? ? 0.858  3.657  0.450  CBA V8U 33 
V8U CGA C28 C 0 1 N N N N N N ? ? ? 0.000  4.891  0.339  CGA V8U 34 
V8U O1A O5  O 0 1 N N N N N N ? ? ? 0.245  5.952  1.124  O1A V8U 35 
V8U CMA C29 C 0 1 N N N N N N ? ? ? 3.042  2.008  -2.192 CMA V8U 36 
V8U NA  N3  N 0 1 Y N N N N N ? ? ? 2.006  -0.591 0.171  NA  V8U 37 
V8U CHB C30 C 0 1 N N N N N N ? ? ? 4.103  -0.785 -1.280 CHB V8U 38 
V8U CMB C31 C 0 1 N N N N N N ? ? ? 7.079  -1.744 -1.752 CMB V8U 39 
V8U CAB C32 C 0 1 N N N N N N ? ? ? 8.833  -0.179 0.303  CAB V8U 40 
V8U CBB C33 C 0 1 N N N N N N ? ? ? 9.473  0.556  1.227  CBB V8U 41 
V8U OB  O6  O 0 1 N N N N N N ? ? ? 6.795  1.575  1.836  OB  V8U 42 
V8U NB  N4  N 0 1 N N N N N N ? ? ? 5.257  0.587  0.458  NB  V8U 43 
V8U H1  H1  H 0 1 N N N N N N ? ? ? 2.668  -5.522 -0.359 H1  V8U 44 
V8U H2  H2  H 0 1 N N N N N N ? ? ? 0.929  -2.296 -0.470 H2  V8U 45 
V8U H3  H3  H 0 1 N N N N N N ? ? ? -0.221 -3.432 -1.214 H3  V8U 46 
V8U H4  H4  H 0 1 N N N N N N ? ? ? -0.188 -2.600 1.723  H4  V8U 47 
V8U H5  H5  H 0 1 N N N N N N ? ? ? -1.339 -3.737 0.979  H5  V8U 48 
V8U H6  H6  H 0 1 N N N N N N ? ? ? -3.108 -3.301 -1.810 H6  V8U 49 
V8U H7  H7  H 0 1 N N N N N N ? ? ? -3.222 -3.869 -0.126 H7  V8U 50 
V8U H8  H8  H 0 1 N N N N N N ? ? ? -4.542 -2.905 -0.833 H8  V8U 51 
V8U H9  H9  H 0 1 N N N N N N ? ? ? -4.687 -0.827 -2.061 H9  V8U 52 
V8U H10 H10 H 0 1 N N N N N N ? ? ? -4.417 0.875  -1.613 H10 V8U 53 
V8U H11 H11 H 0 1 N N N N N N ? ? ? -7.051 0.040  -2.736 H11 V8U 54 
V8U H12 H12 H 0 1 N N N N N N ? ? ? -8.664 0.271  -2.021 H12 V8U 55 
V8U H13 H13 H 0 1 N N N N N N ? ? ? -7.840 2.369  -3.055 H13 V8U 56 
V8U H14 H14 H 0 1 N N N N N N ? ? ? -8.015 2.551  -1.293 H14 V8U 57 
V8U H15 H15 H 0 1 N N N N N N ? ? ? -6.401 2.319  -2.008 H15 V8U 58 
V8U H16 H16 H 0 1 N N N N N N ? ? ? -9.548 -0.118 1.727  H16 V8U 59 
V8U H17 H17 H 0 1 N N N N N N ? ? ? -9.537 1.141  0.469  H17 V8U 60 
V8U H18 H18 H 0 1 N N N N N N ? ? ? -9.808 -0.561 0.023  H18 V8U 61 
V8U H19 H19 H 0 1 N N N N N N ? ? ? -2.435 1.294  0.080  H19 V8U 62 
V8U H20 H20 H 0 1 N N N N N N ? ? ? 0.142  -0.512 2.138  H20 V8U 63 
V8U H21 H21 H 0 1 N N N N N N ? ? ? -0.399 1.139  1.750  H21 V8U 64 
V8U H22 H22 H 0 1 N N N N N N ? ? ? 0.438  3.006  -1.560 H22 V8U 65 
V8U H23 H23 H 0 1 N N N N N N ? ? ? -0.666 2.348  -0.328 H23 V8U 66 
V8U H24 H24 H 0 1 N N N N N N ? ? ? 0.791  3.257  1.461  H24 V8U 67 
V8U H25 H25 H 0 1 N N N N N N ? ? ? 1.894  3.914  0.229  H25 V8U 68 
V8U H26 H26 H 0 1 N N N N N N ? ? ? -0.332 6.720  1.017  H26 V8U 69 
V8U H27 H27 H 0 1 N N N N N N ? ? ? 3.750  2.677  -1.702 H27 V8U 70 
V8U H28 H28 H 0 1 N N N N N N ? ? ? 3.566  1.402  -2.931 H28 V8U 71 
V8U H29 H29 H 0 1 N N N N N N ? ? ? 2.269  2.595  -2.687 H29 V8U 72 
V8U H30 H30 H 0 1 N N N N N N ? ? ? 2.094  -1.444 0.625  H30 V8U 73 
V8U H31 H31 H 0 1 N N N N N N ? ? ? 4.001  -1.863 -1.149 H31 V8U 74 
V8U H32 H32 H 0 1 N N N N N N ? ? ? 4.233  -0.559 -2.338 H32 V8U 75 
V8U H33 H33 H 0 1 N N N N N N ? ? ? 7.321  -1.235 -2.685 H33 V8U 76 
V8U H34 H34 H 0 1 N N N N N N ? ? ? 7.962  -2.266 -1.383 H34 V8U 77 
V8U H35 H35 H 0 1 N N N N N N ? ? ? 6.279  -2.464 -1.927 H35 V8U 78 
V8U H36 H36 H 0 1 N N N N N N ? ? ? 9.390  -0.855 -0.329 H36 V8U 79 
V8U H37 H37 H 0 1 N N N N N N ? ? ? 10.544 0.470  1.338  H37 V8U 80 
V8U H38 H38 H 0 1 N N N N N N ? ? ? 8.917  1.232  1.859  H38 V8U 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V8U CBB CAB DOUB N N 1  
V8U CAB C3B SING N N 2  
V8U OB  C4B DOUB N N 3  
V8U C3B C4B SING N N 4  
V8U C3B C2B DOUB N N 5  
V8U C4B NB  SING N N 6  
V8U CMB C2B SING N N 7  
V8U C2B C1B SING N N 8  
V8U NB  C1B DOUB N N 9  
V8U C1B CHB SING N N 10 
V8U CHB C4A SING N N 11 
V8U CMA C3A SING N N 12 
V8U OC  C1C DOUB N N 13 
V8U C4A C3A DOUB Y N 14 
V8U C4A NA  SING Y N 15 
V8U C3A C2A SING Y N 16 
V8U O2A CGA DOUB N N 17 
V8U O1A CGA SING N N 18 
V8U C1C C2C SING N N 19 
V8U C1C NC  SING N N 20 
V8U NA  C1A SING Y N 21 
V8U CMC C2C SING N N 22 
V8U CGA CBA SING N N 23 
V8U C2C C3C DOUB N N 24 
V8U C2A C1A DOUB Y N 25 
V8U C2A CAA SING N N 26 
V8U NC  C4C DOUB N N 27 
V8U C1A CHA SING N N 28 
V8U CBA CAA SING N N 29 
V8U C4C C3C SING N N 30 
V8U C4C CHD SING N N 31 
V8U C3C CAC SING N N 32 
V8U ND  C4D SING Y N 33 
V8U ND  C1D SING Y N 34 
V8U CHA C4D SING N N 35 
V8U C4D C3D DOUB Y N 36 
V8U CAC CBC SING N N 37 
V8U CHD C1D SING N N 38 
V8U C1D C2D DOUB Y N 39 
V8U C3D C2D SING Y N 40 
V8U C3D CAD SING N N 41 
V8U C2D CMD SING N N 42 
V8U CBD CAD SING N N 43 
V8U CBD CGD SING N N 44 
V8U CGD O1D DOUB N N 45 
V8U CGD O2D SING N N 46 
V8U O2D H1  SING N N 47 
V8U CBD H2  SING N N 48 
V8U CBD H3  SING N N 49 
V8U CAD H4  SING N N 50 
V8U CAD H5  SING N N 51 
V8U CMD H6  SING N N 52 
V8U CMD H7  SING N N 53 
V8U CMD H8  SING N N 54 
V8U CHD H9  SING N N 55 
V8U CHD H10 SING N N 56 
V8U CAC H11 SING N N 57 
V8U CAC H12 SING N N 58 
V8U CBC H13 SING N N 59 
V8U CBC H14 SING N N 60 
V8U CBC H15 SING N N 61 
V8U CMC H16 SING N N 62 
V8U CMC H17 SING N N 63 
V8U CMC H18 SING N N 64 
V8U ND  H19 SING N N 65 
V8U CHA H20 SING N N 66 
V8U CHA H21 SING N N 67 
V8U CAA H22 SING N N 68 
V8U CAA H23 SING N N 69 
V8U CBA H24 SING N N 70 
V8U CBA H25 SING N N 71 
V8U O1A H26 SING N N 72 
V8U CMA H27 SING N N 73 
V8U CMA H28 SING N N 74 
V8U CMA H29 SING N N 75 
V8U NA  H30 SING N N 76 
V8U CHB H31 SING N N 77 
V8U CHB H32 SING N N 78 
V8U CMB H33 SING N N 79 
V8U CMB H34 SING N N 80 
V8U CMB H35 SING N N 81 
V8U CAB H36 SING N N 82 
V8U CBB H37 SING N N 83 
V8U CBB H38 SING N N 84 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V8U InChI            InChI                1.06  "InChI=1S/C33H38N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h8,34-35H,2,7,9-15H2,1,3-6H3,(H,38,39)(H,40,41)" 
V8U InChIKey         InChI                1.06  UETWWFBMDBJSDH-UHFFFAOYSA-N                                                                                                                                                                                
V8U SMILES_CANONICAL CACTVS               3.385 "CCC1=C(C)C(=O)N=C1Cc2[nH]c(Cc3[nH]c(CC4=NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C"                                                                                                                   
V8U SMILES           CACTVS               3.385 "CCC1=C(C)C(=O)N=C1Cc2[nH]c(Cc3[nH]c(CC4=NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C"                                                                                                                   
V8U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)N=C1Cc2c(c(c([nH]2)Cc3c(c(c([nH]3)CC4=NC(=O)C(=C4C)C=C)C)CCC(=O)O)CCC(=O)O)C)C"                                                                                                               
V8U SMILES           "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)N=C1Cc2c(c(c([nH]2)Cc3c(c(c([nH]3)CC4=NC(=O)C(=C4C)C=C)C)CCC(=O)O)CCC(=O)O)C)C"                                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           V8U 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V8U "Create component" 2023-02-27 PDBE 
V8U "Initial release"  2024-02-28 RCSB 
# 
