data_GYV
#

_chem_comp.id                                   GYV
_chem_comp.name                                 2-acetamido-1-O-carbamoyl-2-deoxy-alpha-D-glucopyranose
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C9 H16 N2 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-(ACETYLAMINO)-1-O-CARBAMOYL-2-DEOXY-ALPHA-D-GLUCOPYRANOSE;
2-acetamido-1-O-carbamoyl-2-deoxy-alpha-D-glucose;
2-acetamido-1-O-carbamoyl-2-deoxy-D-glucose;
2-acetamido-1-O-carbamoyl-2-deoxy-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-01-26
_chem_comp.pdbx_modified_date                   2020-07-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       264.233
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GYV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2X3T
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GYV  "2-(ACETYLAMINO)-1-O-CARBAMOYL-2-DEOXY-ALPHA-D-GLUCOPYRANOSE"  PDB  ?  
2  GYV  2-acetamido-1-O-carbamoyl-2-deoxy-alpha-D-glucose              PDB  ?  
3  GYV  2-acetamido-1-O-carbamoyl-2-deoxy-D-glucose                    PDB  ?  
4  GYV  2-acetamido-1-O-carbamoyl-2-deoxy-glucose                      PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GYV  ND3   ND3   N  0  1  N  N  N  22.266  27.065  42.329   0.532   3.298   1.746  ND3   GYV   1  
GYV  C1A   C1    C  0  1  N  N  N  22.714  27.873  43.265   0.383   2.560   0.628  C1A   GYV   2  
GYV  O1A   O1A   O  0  1  N  N  N  23.042  27.557  44.350   0.669   3.032  -0.454  O1A   GYV   3  
GYV  O1    O1B   O  0  1  N  N  N  22.852  29.278  43.046  -0.083   1.299   0.711  O1    GYV   4  
GYV  C1    C15   C  0  1  N  N  R  23.322  29.983  44.157  -0.217   0.563  -0.533  C1    GYV   5  
GYV  O5    O8    O  0  1  N  N  N  24.538  30.559  43.740   1.080   0.258  -1.049  O5    GYV   6  
GYV  C5    C8    C  0  1  N  N  R  24.595  31.830  43.062   1.893  -0.516  -0.164  C5    GYV   7  
GYV  C6    C9    C  0  1  N  N  N  25.882  32.534  43.444   3.260  -0.756  -0.806  C6    GYV   8  
GYV  O6    O9    O  0  1  N  N  N  26.832  32.411  42.396   3.943   0.491  -0.954  O6    GYV   9  
GYV  C4    C7    C  0  1  N  N  S  23.415  32.756  43.310   1.213  -1.860   0.107  C4    GYV  10  
GYV  O4    O7    O  0  1  N  N  N  23.228  33.708  42.291   1.995  -2.612   1.038  O4    GYV  11  
GYV  C3    C6    C  0  1  N  N  R  22.210  31.917  43.252  -0.180  -1.610   0.694  C3    GYV  12  
GYV  O3    O6    O  0  1  N  N  N  21.138  32.825  43.293  -0.851  -2.857   0.882  O3    GYV  13  
GYV  C2    C5    C  0  1  N  N  R  22.357  31.096  44.491  -0.982  -0.738  -0.277  C2    GYV  14  
GYV  N2    N5    N  0  1  N  N  N  21.056  30.535  44.746  -2.290  -0.430   0.308  N5    GYV  15  
GYV  C10   C10   C  0  1  N  N  N  20.453  30.678  45.908  -3.331  -0.128  -0.493  C10   GYV  16  
GYV  O10   O10   O  0  1  N  N  N  20.939  31.278  46.802  -3.186  -0.111  -1.697  O10   GYV  17  
GYV  C11   C11   C  0  1  N  N  N  19.126  30.052  46.071  -4.676   0.189   0.108  C11   GYV  18  
GYV  HD31  HD31  H  0  0  N  N  N  22.212  26.103  42.597   0.867   4.206   1.687  HD31  GYV  19  
GYV  HD32  HD32  H  0  0  N  N  N  22.000  27.387  41.420   0.300   2.922   2.610  HD32  GYV  20  
GYV  H1    H15   H  0  1  N  N  N  23.435  29.334  45.038  -0.763   1.169  -1.257  H1    GYV  21  
GYV  H2    H5    H  0  1  N  N  N  22.718  31.669  45.358  -1.119  -1.271  -1.217  H2    GYV  22  
GYV  H5    H8    H  0  1  N  N  N  24.555  31.597  41.988   2.022   0.023   0.775  H5    GYV  23  
GYV  H61   H91C  H  0  1  N  N  N  25.674  33.599  43.623   3.848  -1.419  -0.171  H61   GYV  24  
GYV  H62   H92C  H  0  1  N  N  N  26.289  32.074  44.356   3.126  -1.215  -1.786  H62   GYV  25  
GYV  H4    H7    H  0  1  N  N  N  23.597  33.274  44.263   1.121  -2.417  -0.825  H4    GYV  26  
GYV  HO6   H9    H  0  1  N  Y  N  26.381  32.384  41.560   4.819   0.414  -1.355  HO6   GYV  27  
GYV  HO4   HA    H  0  1  N  Y  N  23.186  34.577  42.673   2.892  -2.803   0.733  HO4   GYV  28  
GYV  H3    H6    H  0  1  N  N  N  22.058  31.267  42.377  -0.085  -1.098   1.652  H3    GYV  29  
GYV  HO3   HB    H  0  1  N  Y  N  20.930  33.030  44.197  -0.394  -3.463   1.482  HO3   GYV  30  
GYV  HN2   HC    H  0  1  N  N  N  20.597  30.022  44.020  -2.406  -0.444   1.270  HC    GYV  31  
GYV  H111  H111  H  0  0  N  N  N  18.922  29.896  47.141  -4.587   1.056   0.763  H111  GYV  32  
GYV  H112  H112  H  0  0  N  N  N  18.355  30.710  45.643  -5.388   0.407  -0.688  H112  GYV  33  
GYV  H113  H113  H  0  0  N  N  N  19.112  29.083  45.550  -5.027  -0.667   0.685  H113  GYV  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GYV  ND3  C1A   SING  N  N   1  
GYV  C1A  O1A   DOUB  N  N   2  
GYV  C1A  O1    SING  N  N   3  
GYV  O1   C1    SING  N  N   4  
GYV  C1   O5    SING  N  N   5  
GYV  C1   C2    SING  N  N   6  
GYV  O5   C5    SING  N  N   7  
GYV  C5   C6    SING  N  N   8  
GYV  C5   C4    SING  N  N   9  
GYV  C6   O6    SING  N  N  10  
GYV  C4   O4    SING  N  N  11  
GYV  C4   C3    SING  N  N  12  
GYV  C3   O3    SING  N  N  13  
GYV  C3   C2    SING  N  N  14  
GYV  C2   N2    SING  N  N  15  
GYV  N2   C10   SING  N  N  16  
GYV  C10  O10   DOUB  N  N  17  
GYV  C10  C11   SING  N  N  18  
GYV  ND3  HD31  SING  N  N  19  
GYV  ND3  HD32  SING  N  N  20  
GYV  C1   H1    SING  N  N  21  
GYV  C2   H2    SING  N  N  22  
GYV  C5   H5    SING  N  N  23  
GYV  C6   H61   SING  N  N  24  
GYV  C6   H62   SING  N  N  25  
GYV  C4   H4    SING  N  N  26  
GYV  O6   HO6   SING  N  N  27  
GYV  O4   HO4   SING  N  N  28  
GYV  C3   H3    SING  N  N  29  
GYV  O3   HO3   SING  N  N  30  
GYV  N2   HN2   SING  N  N  31  
GYV  C11  H111  SING  N  N  32  
GYV  C11  H112  SING  N  N  33  
GYV  C11  H113  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GYV  SMILES            ACDLabs               10.04  "O=C(OC1OC(C(O)C(O)C1NC(=O)C)CO)N"  
GYV  SMILES_CANONICAL  CACTVS                3.352  "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1OC(N)=O"  
GYV  SMILES            CACTVS                3.352  "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OC(N)=O"  
GYV  SMILES_CANONICAL  "OpenEye OEToolkits"  1.6.1  "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@@H]1OC(=O)N)CO)O)O"  
GYV  SMILES            "OpenEye OEToolkits"  1.6.1  "CC(=O)NC1C(C(C(OC1OC(=O)N)CO)O)O"  
GYV  InChI             InChI                 1.03   "InChI=1S/C9H16N2O7/c1-3(13)11-5-7(15)6(14)4(2-12)17-8(5)18-9(10)16/h4-8,12,14-15H,2H2,1H3,(H2,10,16)(H,11,13)/t4-,5-,6-,7-,8-/m1/s1"  
GYV  InChIKey          InChI                 1.03   BMFDLZBABRHLIB-FMDGEEDCSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GYV  "SYSTEMATIC NAME"            ACDLabs               10.04  "2-(acetylamino)-1-O-carbamoyl-2-deoxy-alpha-D-glucopyranose"  
GYV  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.6.1  "[(2R,3R,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl] carbamate"  
GYV  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    methyl-a-D-glucopyranoside  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GYV  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GYV  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GYV  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
GYV  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GYV  "Create component"          2010-01-26  EBI   
GYV  "Modify descriptor"         2011-06-04  RCSB  
GYV  "Other modification"        2020-07-03  RCSB  
GYV  "Modify name"               2020-07-17  RCSB  
GYV  "Modify synonyms"           2020-07-17  RCSB  
GYV  "Modify linking type"       2020-07-17  RCSB  
GYV  "Modify atom id"            2020-07-17  RCSB  
GYV  "Modify component atom id"  2020-07-17  RCSB  
GYV  "Modify leaving atom flag"  2020-07-17  RCSB  
GYV  "Modify name"               2020-07-18  RCSB  
##
