data_LPV
# 
_chem_comp.id                                    LPV 
_chem_comp.name                                  "(2~{R},3~{S})-3-azanyl-~{N}-[(2~{R})-4-(4-butylphenoxy)-1-phenyl-butan-2-yl]-2-oxidanyl-butanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H34 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-07-07 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        398.538 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LPV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AB5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LPV N1  N1  N 0 1 N N N N N N 27.732 -7.127  -1.952 -2.192 0.064  -0.833 N1  LPV 1  
LPV C4  C1  C 0 1 N N N N N N 29.311 -2.734  -2.393 -1.996 -4.365 -1.266 C4  LPV 2  
LPV C5  C2  C 0 1 N N N N N N 27.037 -9.336  -1.049 -3.191 2.288  -0.641 C5  LPV 3  
LPV C6  C3  C 0 1 N N R N N N 27.594 -8.580  -2.243 -1.966 1.423  -0.336 C6  LPV 4  
LPV C7  C4  C 0 1 N N N N N N 28.953 -9.136  -2.634 -0.737 2.020  -1.025 C7  LPV 5  
LPV C8  C5  C 0 1 N N N N N N 28.821 -10.420 -3.445 0.509  1.229  -0.621 C8  LPV 6  
LPV C10 C6  C 0 1 Y N N N N N 24.838 -8.098  -1.144 -4.635 2.258  1.403  C10 LPV 7  
LPV C13 C7  C 0 1 Y N N N N N 24.655 -8.150  1.644  -6.288 0.340  0.291  C13 LPV 8  
LPV C15 C8  C 0 1 Y N N N N N 30.225 -11.859 -4.805 2.854  1.196  -1.009 C15 LPV 9  
LPV C17 C9  C 0 1 Y N N N N N 29.892 -14.269 -4.959 5.226  1.083  -1.340 C17 LPV 10 
LPV C20 C10 C 0 1 Y N N N N N 31.060 -11.908 -5.916 2.922  0.099  -0.162 C20 LPV 11 
LPV C21 C11 C 0 1 N N N N N N 30.985 -15.666 -6.793 6.617  -0.669 -0.218 C21 LPV 12 
LPV C22 C12 C 0 1 N N N N N N 29.690 -16.364 -7.234 7.259  -0.013 1.007  C22 LPV 13 
LPV C24 C13 C 0 1 N N N N N N 27.807 -16.309 -8.881 9.249  -0.023 2.517  C24 LPV 14 
LPV C23 C14 C 0 1 N N N N N N 29.262 -15.909 -8.633 8.607  -0.678 1.293  C23 LPV 15 
LPV C18 C15 C 0 1 Y N N N N N 30.722 -14.323 -6.076 5.290  -0.014 -0.500 C18 LPV 16 
LPV C19 C16 C 0 1 Y N N N N N 31.304 -13.133 -6.540 4.139  -0.503 0.090  C19 LPV 17 
LPV C16 C17 C 0 1 Y N N N N N 29.641 -13.050 -4.335 4.010  1.685  -1.600 C16 LPV 18 
LPV O3  O1  O 0 1 N N N N N N 30.011 -10.605 -4.186 1.657  1.786  -1.264 O3  LPV 19 
LPV C1  C18 C 0 1 N N N N N N 27.283 -6.146  -2.762 -2.857 -0.829 -0.073 C1  LPV 20 
LPV O1  O2  O 0 1 N N N N N N 26.580 -6.331  -3.790 -3.263 -0.509 1.023  O1  LPV 21 
LPV C2  C19 C 0 1 N N R N N N 27.616 -4.660  -2.336 -3.095 -2.226 -0.586 C2  LPV 22 
LPV O2  O3  O 0 1 N N N N N N 26.791 -3.824  -3.150 -3.914 -2.941 0.341  O2  LPV 23 
LPV C3  C20 C 0 1 N N S N N N 29.101 -4.253  -2.559 -1.755 -2.947 -0.745 C3  LPV 24 
LPV N2  N2  N 0 1 N N N Y Y N 29.501 -4.678  -3.901 -1.077 -3.012 0.557  N2  LPV 25 
LPV C9  C21 C 0 1 Y N N N N N 25.835 -8.686  -0.385 -4.375 1.772  0.135  C9  LPV 26 
LPV C11 C22 C 0 1 Y N N N N N 23.749 -7.520  -0.511 -5.722 1.784  2.115  C11 LPV 27 
LPV C12 C23 C 0 1 Y N N N N N 23.665 -7.546  0.879  -6.548 0.826  1.559  C12 LPV 28 
LPV C14 C24 C 0 1 Y N N N N N 25.736 -8.741  1.008  -5.201 0.814  -0.421 C14 LPV 29 
LPV H1  H1  H 0 1 N N N N N N 28.186 -6.861  -1.102 -1.867 -0.193 -1.710 H1  LPV 30 
LPV H2  H2  H 0 1 N N N N N N 29.006 -2.430  -1.381 -2.621 -4.910 -0.558 H2  LPV 31 
LPV H3  H3  H 0 1 N N N N N N 30.373 -2.492  -2.544 -2.499 -4.316 -2.232 H3  LPV 32 
LPV H4  H4  H 0 1 N N N N N N 28.703 -2.197  -3.136 -1.041 -4.878 -1.379 H4  LPV 33 
LPV H5  H5  H 0 1 N N N N N N 26.739 -10.339 -1.388 -2.989 3.319  -0.352 H5  LPV 34 
LPV H6  H6  H 0 1 N N N N N N 27.836 -9.425  -0.298 -3.409 2.246  -1.708 H6  LPV 35 
LPV H7  H7  H 0 1 N N N N N N 26.906 -8.710  -3.091 -1.800 1.394  0.740  H7  LPV 36 
LPV H8  H8  H 0 1 N N N N N N 29.528 -9.348  -1.721 -0.865 1.968  -2.106 H8  LPV 37 
LPV H9  H9  H 0 1 N N N N N N 29.486 -8.386  -3.237 -0.620 3.061  -0.723 H9  LPV 38 
LPV H10 H10 H 0 1 N N N N N N 27.965 -10.340 -4.131 0.637  1.281  0.461  H10 LPV 39 
LPV H11 H11 H 0 1 N N N N N N 28.669 -11.273 -2.768 0.392  0.188  -0.923 H11 LPV 40 
LPV H12 H12 H 0 1 N N N N N N 24.908 -8.090  -2.222 -3.987 3.003  1.839  H12 LPV 41 
LPV H13 H13 H 0 1 N N N N N N 24.583 -8.159  2.722  -6.934 -0.408 -0.144 H13 LPV 42 
LPV H14 H14 H 0 1 N N N N N N 29.443 -15.174 -4.576 6.126  1.463  -1.800 H14 LPV 43 
LPV H15 H15 H 0 1 N N N N N N 31.516 -11.005 -6.293 2.024  -0.284 0.299  H15 LPV 44 
LPV H16 H16 H 0 1 N N N N N N 31.528 -16.332 -6.106 7.273  -0.548 -1.081 H16 LPV 45 
LPV H17 H17 H 0 1 N N N N N N 31.603 -15.475 -7.683 6.465  -1.730 -0.024 H17 LPV 46 
LPV H18 H18 H 0 1 N N N N N N 28.891 -16.122 -6.518 7.412  1.048  0.812  H18 LPV 47 
LPV H19 H19 H 0 1 N N N N N N 29.855 -17.451 -7.246 6.604  -0.134 1.869  H19 LPV 48 
LPV H20 H20 H 0 1 N N N N N N 27.502 -15.981 -9.886 10.210 -0.497 2.721  H20 LPV 49 
LPV H21 H21 H 0 1 N N N N N N 27.710 -17.402 -8.807 9.402  1.038  2.323  H21 LPV 50 
LPV H22 H22 H 0 1 N N N N N N 27.162 -15.832 -8.128 8.594  -0.144 3.380  H22 LPV 51 
LPV H23 H23 H 0 1 N N N N N N 29.906 -16.386 -9.386 8.455  -1.740 1.487  H23 LPV 52 
LPV H24 H24 H 0 1 N N N N N N 29.359 -14.816 -8.708 9.263  -0.557 0.430  H24 LPV 53 
LPV H25 H25 H 0 1 N N N N N N 31.956 -13.166 -7.400 4.193  -1.357 0.750  H25 LPV 54 
LPV H26 H26 H 0 1 N N N N N N 28.987 -13.018 -3.476 3.959  2.536  -2.264 H26 LPV 55 
LPV H27 H27 H 0 1 N Y N N N N 27.367 -4.535  -1.272 -3.598 -2.177 -1.553 H27 LPV 56 
LPV H28 H28 H 0 1 N N N N N N 26.318 -4.359  -3.777 -3.528 -3.023 1.224  H28 LPV 57 
LPV H29 H29 H 0 1 N N N N N N 29.717 -4.773  -1.811 -1.130 -2.401 -1.452 H29 LPV 58 
LPV H30 H30 H 0 1 N N N Y Y N 29.360 -5.664  -3.995 -1.663 -3.457 1.248  H30 LPV 59 
LPV H31 H31 H 0 1 N Y N Y Y N 28.949 -4.196  -4.582 -0.189 -3.484 0.479  H31 LPV 60 
LPV H33 H33 H 0 1 N N N N N N 22.969 -7.052  -1.093 -5.925 2.164  3.105  H33 LPV 61 
LPV H34 H34 H 0 1 N N N N N N 22.818 -7.090  1.369  -7.397 0.456  2.115  H34 LPV 62 
LPV H35 H35 H 0 1 N N N N N N 26.498 -9.242  1.587  -4.998 0.434  -1.412 H35 LPV 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LPV C24 C23 SING N N 1  
LPV C23 C22 SING N N 2  
LPV C22 C21 SING N N 3  
LPV C21 C18 SING N N 4  
LPV C19 C18 DOUB Y N 5  
LPV C19 C20 SING Y N 6  
LPV C18 C17 SING Y N 7  
LPV C20 C15 DOUB Y N 8  
LPV C17 C16 DOUB Y N 9  
LPV C15 C16 SING Y N 10 
LPV C15 O3  SING N N 11 
LPV O3  C8  SING N N 12 
LPV N2  C3  SING N N 13 
LPV O1  C1  DOUB N N 14 
LPV C8  C7  SING N N 15 
LPV O2  C2  SING N N 16 
LPV C1  C2  SING N N 17 
LPV C1  N1  SING N N 18 
LPV C7  C6  SING N N 19 
LPV C3  C4  SING N N 20 
LPV C3  C2  SING N N 21 
LPV C6  N1  SING N N 22 
LPV C6  C5  SING N N 23 
LPV C10 C11 DOUB Y N 24 
LPV C10 C9  SING Y N 25 
LPV C5  C9  SING N N 26 
LPV C11 C12 SING Y N 27 
LPV C9  C14 DOUB Y N 28 
LPV C12 C13 DOUB Y N 29 
LPV C14 C13 SING Y N 30 
LPV N1  H1  SING N N 31 
LPV C4  H2  SING N N 32 
LPV C4  H3  SING N N 33 
LPV C4  H4  SING N N 34 
LPV C5  H5  SING N N 35 
LPV C5  H6  SING N N 36 
LPV C6  H7  SING N N 37 
LPV C7  H8  SING N N 38 
LPV C7  H9  SING N N 39 
LPV C8  H10 SING N N 40 
LPV C8  H11 SING N N 41 
LPV C10 H12 SING N N 42 
LPV C13 H13 SING N N 43 
LPV C17 H14 SING N N 44 
LPV C20 H15 SING N N 45 
LPV C21 H16 SING N N 46 
LPV C21 H17 SING N N 47 
LPV C22 H18 SING N N 48 
LPV C22 H19 SING N N 49 
LPV C24 H20 SING N N 50 
LPV C24 H21 SING N N 51 
LPV C24 H22 SING N N 52 
LPV C23 H23 SING N N 53 
LPV C23 H24 SING N N 54 
LPV C19 H25 SING N N 55 
LPV C16 H26 SING N N 56 
LPV C2  H27 SING N N 57 
LPV O2  H28 SING N N 58 
LPV C3  H29 SING N N 59 
LPV N2  H30 SING N N 60 
LPV N2  H31 SING N N 61 
LPV C11 H33 SING N N 62 
LPV C12 H34 SING N N 63 
LPV C14 H35 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LPV InChI            InChI                1.06  "InChI=1S/C24H34N2O3/c1-3-4-8-19-11-13-22(14-12-19)29-16-15-21(17-20-9-6-5-7-10-20)26-24(28)23(27)18(2)25/h5-7,9-14,18,21,23,27H,3-4,8,15-17,25H2,1-2H3,(H,26,28)/t18-,21-,23+/m0/s1" 
LPV InChIKey         InChI                1.06  NJJDDOXTSSONSJ-AVCGJXAMSA-N                                                                                                                                                           
LPV SMILES_CANONICAL CACTVS               3.385 "CCCCc1ccc(OCC[C@@H](Cc2ccccc2)NC(=O)[C@H](O)[C@H](C)N)cc1"                                                                                                                           
LPV SMILES           CACTVS               3.385 "CCCCc1ccc(OCC[CH](Cc2ccccc2)NC(=O)[CH](O)[CH](C)N)cc1"                                                                                                                               
LPV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCc1ccc(cc1)OCC[C@@H](Cc2ccccc2)NC(=O)[C@@H]([C@H](C)N)O"                                                                                                                          
LPV SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCc1ccc(cc1)OCCC(Cc2ccccc2)NC(=O)C(C(C)N)O"                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           LPV 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{S})-3-azanyl-~{N}-[(2~{R})-4-(4-butylphenoxy)-1-phenyl-butan-2-yl]-2-oxidanyl-butanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LPV "Create component"  2022-07-07 PDBE 
LPV "Modify descriptor" 2022-08-22 RCSB 
LPV "Initial release"   2023-10-25 RCSB 
LPV "Modify backbone"   2023-11-03 PDBE 
# 
