data_MFV
# 
_chem_comp.id                                    MFV 
_chem_comp.name                                  "{(4Z)-2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-[(4-hydroxy-3-methylphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C16 H19 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               "THR, TYR, GLY " 
_chem_comp.pdbx_synonyms                         "PEPTIDE DERIVED CHROMOPHORE" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-04-02 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        333.339 
_chem_comp.one_letter_code                       TYG 
_chem_comp.three_letter_code                     MFV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6OFM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
MFV N1   N1  N 0 1 N N N Y Y N 8.367 8.011  2.002  -0.924 -2.405 -1.671 N1  MFV 1  
MFV CA1  CA1 C 0 1 N N R Y N N 7.203 7.940  2.847  -1.872 -1.613 -0.876 CA1 MFV 2  
MFV CB1  CB1 C 0 1 N N R N N N 7.538 8.187  4.349  -2.077 -2.279 0.486  CB1 MFV 3  
MFV CG1  CG1 C 0 1 N N N N N N 8.630 7.246  4.866  -2.515 -3.731 0.284  CG1 MFV 4  
MFV OG1  OG1 O 0 1 N N N N N N 7.926 9.541  4.621  -0.850 -2.249 1.220  OG1 MFV 5  
MFV C1   C1  C 0 1 N N N Y N N 6.262 8.957  2.316  -1.323 -0.223 -0.678 C1  MFV 6  
MFV N2   N2  N 0 1 N N N Y N N 6.056 10.163 2.814  -0.065 0.052  -0.531 N2  MFV 7  
MFV N3   N3  N 0 1 N N N Y N N 5.451 8.695  1.179  -2.088 0.909  -0.638 N3  MFV 8  
MFV C2   C2  C 0 1 N N N Y N N 4.689 9.858  0.930  -1.270 1.969  -0.454 C2  MFV 9  
MFV O2   O2  O 0 1 N N N Y N N 3.907 9.931  -0.001 -1.587 3.141  -0.367 O2  MFV 10 
MFV CA2  CA2 C 0 1 N N N Y N N 5.110 10.772 2.012  0.087  1.401  -0.375 CA2 MFV 11 
MFV CA3  CA3 C 0 1 N N N Y N N 5.435 7.492  0.366  -3.546 0.964  -0.773 CA3 MFV 12 
MFV C3   C3  C 0 1 N N N Y N Y 4.435 6.464  0.584  -4.181 0.842  0.588  C3  MFV 13 
MFV O3   O3  O 0 1 N N N Y N Y 4.014 5.786  -0.383 -3.487 0.721  1.570  O3  MFV 14 
MFV CB2  CB2 C 0 1 N N N N N N 4.612 12.060 2.101  1.267  2.089  -0.191 CB2 MFV 15 
MFV CG2  CG2 C 0 1 Y N N N N N 4.925 13.158 2.948  2.523  1.356  -0.021 CG2 MFV 16 
MFV CD1  CD1 C 0 1 Y N N N N N 5.754 12.982 4.181  2.551  -0.038 -0.170 CD1 MFV 17 
MFV CD2  CD2 C 0 1 Y N N N N N 4.474 14.497 2.603  3.705  2.046  0.285  CD2 MFV 18 
MFV CE1  CE1 C 0 1 Y N N N N N 6.037 14.076 5.019  3.736  -0.719 -0.009 CE1 MFV 19 
MFV CE2  CE2 C 0 1 Y N N N N N 4.749 15.583 3.448  4.875  1.360  0.442  CE2 MFV 20 
MFV CZ   CZ  C 0 1 Y N N N N N 5.576 15.435 4.680  4.901  -0.024 0.301  CZ  MFV 21 
MFV OH   OH  O 0 1 N N N N N N 5.793 16.447 5.411  6.068  -0.698 0.459  OH  MFV 22 
MFV CS   CS  C 0 1 N N N N N N 6.859 13.864 6.262  3.772  -2.217 -0.167 CS  MFV 23 
MFV OXT  O1  O 0 1 N Y N Y N Y 4.041 6.431  1.867  -5.517 0.867  0.710  O1  MFV 24 
MFV H    H1  H 0 1 N N N Y Y N 9.045 7.344  2.311  -0.031 -2.473 -1.207 H1  MFV 25 
MFV H2   H2  H 0 1 N Y N Y Y N 8.106 7.809  1.058  -1.298 -3.321 -1.872 H2  MFV 26 
MFV HA1  H4  H 0 1 N N N Y N N 6.743 6.945  2.759  -2.827 -1.556 -1.399 H4  MFV 27 
MFV H5   H5  H 0 1 N N N N N N 6.624 7.967  4.920  -2.845 -1.741 1.042  H5  MFV 28 
MFV H6   H6  H 0 1 N N N N N N 8.828 7.461  5.926  -1.746 -4.268 -0.271 H6  MFV 29 
MFV H7   H7  H 0 1 N N N N N N 8.296 6.203  4.759  -2.660 -4.205 1.254  H7  MFV 30 
MFV H8   H8  H 0 1 N N N N N N 9.551 7.398  4.283  -3.450 -3.753 -0.275 H8  MFV 31 
MFV H9   H9  H 0 1 N N N N N N 8.118 9.636  5.547  -0.120 -2.710 0.784  H9  MFV 32 
MFV HA31 H10 H 0 1 N N N Y N N 6.415 7.010  0.499  -3.833 1.914  -1.224 H10 MFV 33 
MFV HA32 H11 H 0 1 N N N Y N N 5.326 7.820  -0.678 -3.883 0.144  -1.406 H11 MFV 34 
MFV H12  H12 H 0 1 N N N N N N 3.831 12.273 1.386  1.265  3.169  -0.172 H12 MFV 35 
MFV H14  H14 H 0 1 N N N N N N 6.139 12.004 4.430  1.645  -0.575 -0.409 H14 MFV 36 
MFV H15  H15 H 0 1 N N N N N N 3.923 14.657 1.688  3.690  3.120  0.396  H15 MFV 37 
MFV H16  H16 H 0 1 N N N N N N 4.350 16.555 3.199  5.784  1.893  0.678  H16 MFV 38 
MFV H17  H17 H 0 1 N N N N N N 7.926 13.986 6.022  3.980  -2.467 -1.208 H17 MFV 39 
MFV H18  H18 H 0 1 N N N N N N 6.568 14.602 7.024  4.554  -2.631 0.470  H18 MFV 40 
MFV H19  H19 H 0 1 N N N N N N 6.684 12.849 6.649  2.808  -2.636 0.121  H19 MFV 41 
MFV HXT  H20 H 0 1 N Y N Y N Y 3.352 5.785  1.971  -5.878 0.785  1.603  H20 MFV 42 
MFV H3   H3  H 0 1 N N N N N N 6.331 16.194 6.152  6.236  -0.985 1.367  H3  MFV 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
MFV O3  C3   DOUB N N 1  
MFV O2  C2   DOUB N N 2  
MFV CA3 C3   SING N N 3  
MFV CA3 N3   SING N N 4  
MFV C2  N3   SING N N 5  
MFV C2  CA2  SING N N 6  
MFV N3  C1   SING N N 7  
MFV N1  CA1  SING N N 8  
MFV CA2 CB2  DOUB N Z 9  
MFV CA2 N2   SING N N 10 
MFV CB2 CG2  SING N N 11 
MFV C1  N2   DOUB N N 12 
MFV C1  CA1  SING N N 13 
MFV CD2 CG2  SING Y N 14 
MFV CD2 CE2  DOUB Y N 15 
MFV CA1 CB1  SING N N 16 
MFV CG2 CD1  DOUB Y N 17 
MFV CE2 CZ   SING Y N 18 
MFV CD1 CE1  SING Y N 19 
MFV CB1 OG1  SING N N 20 
MFV CB1 CG1  SING N N 21 
MFV CZ  CE1  DOUB Y N 22 
MFV CZ  OH   SING N N 23 
MFV CE1 CS   SING N N 24 
MFV C3  OXT  SING N N 25 
MFV N1  H    SING N N 26 
MFV N1  H2   SING N N 27 
MFV CA1 HA1  SING N N 28 
MFV CB1 H5   SING N N 29 
MFV CG1 H6   SING N N 30 
MFV CG1 H7   SING N N 31 
MFV CG1 H8   SING N N 32 
MFV OG1 H9   SING N N 33 
MFV CA3 HA31 SING N N 34 
MFV CA3 HA32 SING N N 35 
MFV CB2 H12  SING N N 36 
MFV CD1 H14  SING N N 37 
MFV CD2 H15  SING N N 38 
MFV CE2 H16  SING N N 39 
MFV CS  H17  SING N N 40 
MFV CS  H18  SING N N 41 
MFV CS  H19  SING N N 42 
MFV OXT HXT  SING N N 43 
MFV OH  H3   SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
MFV SMILES           ACDLabs              12.01 "NC(C(O)C)C1=N/C(C(N1CC(O)=O)=O)=C\c2cc(C)c(cc2)O"                                                                                                      
MFV InChI            InChI                1.03  "InChI=1S/C16H19N3O5/c1-8-5-10(3-4-12(8)21)6-11-16(24)19(7-13(22)23)15(18-11)14(17)9(2)20/h3-6,9,14,20-21H,7,17H2,1-2H3,(H,22,23)/b11-6-/t9-,14+/m1/s1" 
MFV InChIKey         InChI                1.03  ZMLILWZLIXQOMW-WOKDAPTFSA-N                                                                                                                             
MFV SMILES_CANONICAL CACTVS               3.385 "C[C@@H](O)[C@H](N)C1=N\C(=C/c2ccc(O)c(C)c2)C(=O)N1CC(O)=O"                                                                                             
MFV SMILES           CACTVS               3.385 "C[CH](O)[CH](N)C1=NC(=Cc2ccc(O)c(C)c2)C(=O)N1CC(O)=O"                                                                                                  
MFV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1O)/C=C\2/C(=O)N(C(=N2)[C@H]([C@@H](C)O)N)CC(=O)O"                                                                                            
MFV SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1O)C=C2C(=O)N(C(=N2)C(C(C)O)N)CC(=O)O"                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
MFV "SYSTEMATIC NAME" ACDLabs              12.01 "{(4Z)-2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-[(4-hydroxy-3-methylphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid"              
MFV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(4~{Z})-2-[(1~{R},2~{R})-1-azanyl-2-oxidanyl-propyl]-4-[(3-methyl-4-oxidanyl-phenyl)methylidene]-5-oxidanylidene-imidazol-1-yl]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
MFV "Create component"   2019-04-02 RCSB 
MFV "Other modification" 2019-04-02 RCSB 
MFV "Initial release"    2019-07-10 RCSB 
MFV "Other modification" 2020-02-14 RCSB 
MFV "Modify synonyms"    2021-03-01 PDBE 
MFV "Modify backbone"    2023-11-03 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      MFV 
_pdbx_chem_comp_synonyms.name         "PEPTIDE DERIVED CHROMOPHORE" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
