data_A1LWW
# 
_chem_comp.id                                    A1LWW 
_chem_comp.name                                  "5-azanyl-3-[2-[4,6-bis(fluoranyl)-2-methyl-3~{H}-benzimidazol-5-yl]ethynyl]-1-[[3-(prop-2-enoylamino)phenyl]methyl]pyrazole-4-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H19 F2 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        475.450 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1LWW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8XZ7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1LWW C13 C1  C 0 1 Y N N N N N -44.143 29.592 31.264 4.871   0.322  -0.406 C13 A1LWW 1  
A1LWW C15 C2  C 0 1 Y N N N N N -42.170 28.237 31.437 6.629   -1.338 -0.361 C15 A1LWW 2  
A1LWW C17 C3  C 0 1 Y N N N N N -43.411 28.771 33.416 4.485   -1.865 0.570  C17 A1LWW 3  
A1LWW C21 C4  C 0 1 N N N N N N -40.726 27.764 28.126 9.643   -0.013 -1.895 C21 A1LWW 4  
A1LWW C22 C5  C 0 1 N N N N N N -50.873 31.772 35.408 -3.098  -0.041 2.447  C22 A1LWW 5  
A1LWW C24 C6  C 0 1 Y N N N N N -51.613 32.822 33.196 -3.802  -2.061 1.148  C24 A1LWW 6  
A1LWW C26 C7  C 0 1 Y N N N N N -53.383 31.831 31.887 -5.505  -1.944 -0.530 C26 A1LWW 7  
A1LWW C28 C8  C 0 1 Y N N N N N -52.718 30.819 33.951 -4.880  0.028  0.693  C28 A1LWW 8  
A1LWW C01 C9  C 0 1 Y N N N N N -48.819 33.038 35.107 -1.713  1.686  1.292  C01 A1LWW 9  
A1LWW C02 C10 C 0 1 Y N N N N N -47.511 32.803 34.642 -0.407  1.777  0.817  C02 A1LWW 10 
A1LWW C03 C11 C 0 1 N N N N N N -46.390 33.820 34.550 0.211   2.931  0.159  C03 A1LWW 11 
A1LWW C06 C12 C 0 1 Y N N N N N -47.537 31.433 34.309 0.226   0.483  1.109  C06 A1LWW 12 
A1LWW C08 C13 C 0 1 N N N N N N -46.374 30.688 33.746 1.572   0.105  0.798  C08 A1LWW 13 
A1LWW C11 C14 C 0 1 N N N N N N -45.448 30.144 33.291 2.675   -0.205 0.543  C11 A1LWW 14 
A1LWW C12 C15 C 0 1 Y N N N N N -44.289 29.479 32.624 4.021   -0.584 0.232  C12 A1LWW 15 
A1LWW C14 C16 C 0 1 Y N N N N N -43.059 28.949 30.652 6.172   -0.053 -0.702 C14 A1LWW 16 
A1LWW C16 C17 C 0 1 Y N N N N N -42.331 28.134 32.844 5.765   -2.236 0.278  C16 A1LWW 17 
A1LWW C19 C18 C 0 1 Y N N N N N -41.537 28.115 29.366 8.278   -0.297 -1.322 C19 A1LWW 18 
A1LWW C23 C19 C 0 1 Y N N N N N -51.747 31.802 34.134 -3.950  -0.709 1.400  C23 A1LWW 19 
A1LWW C25 C20 C 0 1 Y N N N N N -52.437 32.828 32.070 -4.578  -2.677 0.184  C25 A1LWW 20 
A1LWW C27 C21 C 0 1 Y N N N N N -53.522 30.813 32.823 -5.657  -0.587 -0.280 C27 A1LWW 21 
A1LWW C30 C22 C 0 1 N N N N N N -54.898 28.700 33.474 -7.748  -0.415 -1.401 C30 A1LWW 22 
A1LWW C31 C23 C 0 1 N N N N N N -56.064 27.811 33.041 -8.682  0.331  -2.258 C31 A1LWW 23 
A1LWW C35 C24 C 0 1 N N N N N N -55.517 26.506 32.484 -9.819  -0.234 -2.653 C35 A1LWW 24 
A1LWW F33 F1  F 0 1 N N N N N N -43.672 28.753 34.750 3.659   -2.737 1.188  F33 A1LWW 25 
A1LWW F34 F2  F 0 1 N N N N N N -45.054 30.303 30.562 4.426   1.554  -0.738 F34 A1LWW 26 
A1LWW N04 N1  N 0 1 Y N N N N N -49.482 31.918 35.031 -1.868  0.460  1.829  N04 A1LWW 27 
A1LWW N05 N2  N 0 1 Y N N N N N -48.739 30.935 34.548 -0.679  -0.264 1.704  N05 A1LWW 28 
A1LWW N07 N3  N 0 1 N N N N N N -49.333 34.300 35.581 -2.673  2.675  1.229  N07 A1LWW 29 
A1LWW N10 N4  N 0 1 N N N N N N -45.123 33.486 33.946 0.146   3.057  -1.181 N10 A1LWW 30 
A1LWW N18 N5  N 0 1 Y N N N N N -42.638 28.850 29.378 7.240   0.582  -1.310 N18 A1LWW 31 
A1LWW N20 N6  N 0 1 Y N N N N N -41.235 27.740 30.596 7.920   -1.419 -0.769 N20 A1LWW 32 
A1LWW N29 N7  N 0 1 N N N N N N -54.567 29.811 32.603 -6.595  0.158  -1.002 N29 A1LWW 33 
A1LWW O09 O1  O 0 1 N N N N N N -46.551 34.925 34.978 0.783   3.776  0.823  O09 A1LWW 34 
A1LWW O32 O2  O 0 1 N N N N N N -54.301 28.444 34.465 -8.016  -1.549 -1.054 O32 A1LWW 35 
A1LWW H1  H1  H 0 1 N N N N N N -39.857 27.154 28.416 10.282  0.409  -1.119 H1  A1LWW 36 
A1LWW H2  H2  H 0 1 N N N N N N -41.355 27.196 27.425 10.082  -0.940 -2.263 H2  A1LWW 37 
A1LWW H3  H3  H 0 1 N N N N N N -40.380 28.688 27.641 9.551   0.698  -2.716 H3  A1LWW 38 
A1LWW H4  H4  H 0 1 N N N N N N -51.163 32.598 36.073 -3.648  0.791  2.886  H4  A1LWW 39 
A1LWW H5  H5  H 0 1 N N N N N N -51.015 30.814 35.930 -2.846  -0.761 3.225  H5  A1LWW 40 
A1LWW H6  H6  H 0 1 N N N N N N -50.879 33.601 33.338 -3.074  -2.635 1.702  H6  A1LWW 41 
A1LWW H7  H7  H 0 1 N N N N N N -54.016 31.846 31.012 -6.112  -2.426 -1.283 H7  A1LWW 42 
A1LWW H8  H8  H 0 1 N N N N N N -52.845 30.051 34.699 -4.996  1.084  0.890  H8  A1LWW 43 
A1LWW H9  H9  H 0 1 N N N N N N -41.630 27.575 33.446 6.113   -3.224 0.542  H9  A1LWW 44 
A1LWW H10 H10 H 0 1 N N N N N N -52.337 33.614 31.336 -4.459  -3.733 -0.011 H10 A1LWW 45 
A1LWW H11 H11 H 0 1 N N N N N N -57.110 28.069 33.118 -8.444  1.339  -2.567 H11 A1LWW 46 
A1LWW H13 H13 H 0 1 N N N N N N -56.195 25.746 32.125 -10.505 0.313  -3.282 H13 A1LWW 47 
A1LWW H14 H14 H 0 1 N N N N N N -54.451 26.339 32.448 -10.057 -1.242 -2.344 H14 A1LWW 48 
A1LWW H16 H16 H 0 1 N N N N N N -50.290 34.191 35.851 -2.463  3.530  0.824  H16 A1LWW 49 
A1LWW H17 H17 H 0 1 N N N N N N -48.797 34.603 36.369 -3.559  2.514  1.590  H17 A1LWW 50 
A1LWW H18 H18 H 0 1 N N N N N N -44.399 34.173 33.891 -0.310  2.384  -1.710 H18 A1LWW 51 
A1LWW H19 H19 H 0 1 N N N N N N -44.969 32.567 33.582 0.555   3.821  -1.617 H19 A1LWW 52 
A1LWW H20 H20 H 0 1 N N N N N N -43.079 29.260 28.580 7.248   1.486  -1.662 H20 A1LWW 53 
A1LWW H22 H22 H 0 1 N N N N N N -55.108 29.902 31.767 -6.417  1.088  -1.214 H22 A1LWW 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1LWW C21 C19 SING N N 1  
A1LWW C19 N18 SING Y N 2  
A1LWW C19 N20 DOUB Y N 3  
A1LWW N18 C14 SING Y N 4  
A1LWW F34 C13 SING N N 5  
A1LWW N20 C15 SING Y N 6  
A1LWW C14 C13 DOUB Y N 7  
A1LWW C14 C15 SING Y N 8  
A1LWW C13 C12 SING Y N 9  
A1LWW C15 C16 DOUB Y N 10 
A1LWW C26 C25 DOUB Y N 11 
A1LWW C26 C27 SING Y N 12 
A1LWW C25 C24 SING Y N 13 
A1LWW C35 C31 DOUB N N 14 
A1LWW N29 C27 SING N N 15 
A1LWW N29 C30 SING N N 16 
A1LWW C12 C11 SING N N 17 
A1LWW C12 C17 DOUB Y N 18 
A1LWW C27 C28 DOUB Y N 19 
A1LWW C16 C17 SING Y N 20 
A1LWW C31 C30 SING N N 21 
A1LWW C24 C23 DOUB Y N 22 
A1LWW C11 C08 TRIP N N 23 
A1LWW C17 F33 SING N N 24 
A1LWW C30 O32 DOUB N N 25 
A1LWW C08 C06 SING N N 26 
A1LWW N10 C03 SING N N 27 
A1LWW C28 C23 SING Y N 28 
A1LWW C23 C22 SING N N 29 
A1LWW C06 N05 DOUB Y N 30 
A1LWW C06 C02 SING Y N 31 
A1LWW N05 N04 SING Y N 32 
A1LWW C03 C02 SING N N 33 
A1LWW C03 O09 DOUB N N 34 
A1LWW C02 C01 DOUB Y N 35 
A1LWW N04 C01 SING Y N 36 
A1LWW N04 C22 SING N N 37 
A1LWW C01 N07 SING N N 38 
A1LWW C21 H1  SING N N 39 
A1LWW C21 H2  SING N N 40 
A1LWW C21 H3  SING N N 41 
A1LWW C22 H4  SING N N 42 
A1LWW C22 H5  SING N N 43 
A1LWW C24 H6  SING N N 44 
A1LWW C26 H7  SING N N 45 
A1LWW C28 H8  SING N N 46 
A1LWW C16 H9  SING N N 47 
A1LWW C25 H10 SING N N 48 
A1LWW C31 H11 SING N N 49 
A1LWW C35 H13 SING N N 50 
A1LWW C35 H14 SING N N 51 
A1LWW N07 H16 SING N N 52 
A1LWW N07 H17 SING N N 53 
A1LWW N10 H18 SING N N 54 
A1LWW N10 H19 SING N N 55 
A1LWW N18 H20 SING N N 56 
A1LWW N29 H22 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1LWW InChI            InChI                1.06  "InChI=1S/C24H19F2N7O2/c1-3-19(34)31-14-6-4-5-13(9-14)11-33-23(27)20(24(28)35)17(32-33)8-7-15-16(25)10-18-22(21(15)26)30-12(2)29-18/h3-6,9-10H,1,11,27H2,2H3,(H2,28,35)(H,29,30)(H,31,34)" 
A1LWW InChIKey         InChI                1.06  GKKSEORWFYILJW-UHFFFAOYSA-N                                                                                                                                                                
A1LWW SMILES_CANONICAL CACTVS               3.385 "Cc1[nH]c2c(F)c(C#Cc3nn(Cc4cccc(NC(=O)C=C)c4)c(N)c3C(N)=O)c(F)cc2n1"                                                                                                                       
A1LWW SMILES           CACTVS               3.385 "Cc1[nH]c2c(F)c(C#Cc3nn(Cc4cccc(NC(=O)C=C)c4)c(N)c3C(N)=O)c(F)cc2n1"                                                                                                                       
A1LWW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1[nH]c2c(n1)cc(c(c2F)C#Cc3c(c(n(n3)Cc4cccc(c4)NC(=O)C=C)N)C(=O)N)F"                                                                                                                     
A1LWW SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1[nH]c2c(n1)cc(c(c2F)C#Cc3c(c(n(n3)Cc4cccc(c4)NC(=O)C=C)N)C(=O)N)F"                                                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           A1LWW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "5-azanyl-3-[2-[4,6-bis(fluoranyl)-2-methyl-3~{H}-benzimidazol-5-yl]ethynyl]-1-[[3-(prop-2-enoylamino)phenyl]methyl]pyrazole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1LWW "Create component" 2024-01-22 PDBJ 
A1LWW "Initial release"  2024-06-26 RCSB 
A1LWW "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            A1LWW 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C35 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
_pdbx_chem_comp_pcm.first_instance_model_db_code       8XZ7 
# 
