data_DFX
#

_chem_comp.id                                   DFX
_chem_comp.name                                 "1,5-anhydro-2-deoxy-2-fluoro-D-xylitol"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C5 H9 F O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1,2-DEOXY-2-FLUORO-XYLOPYRANOSE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       136.122
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DFX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1BVV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     DFX
_pdbx_chem_comp_synonyms.name        "1,2-DEOXY-2-FLUORO-XYLOPYRANOSE"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DFX  C1   C1   C  0  1  N  N  N  32.825  21.620  35.045  -1.065   1.481   0.173  C1   DFX   1  
DFX  C2   C2   C  0  1  N  N  S  32.938  20.726  36.299  -1.215   0.030  -0.290  C2   DFX   2  
DFX  C3   C3   C  0  1  N  N  S  33.532  21.505  37.480  -0.026  -0.788   0.223  C3   DFX   3  
DFX  C4   C4   C  0  1  N  N  R  34.808  22.290  37.100   1.273  -0.149  -0.278  C4   DFX   4  
DFX  C5   C5   C  0  1  N  N  N  35.244  22.046  35.629   1.327   1.310   0.184  C5   DFX   5  
DFX  O3   O3   O  0  1  N  N  N  33.816  20.605  38.544  -0.120  -2.127  -0.265  O3   DFX   6  
DFX  O4   O4   O  0  1  N  N  N  34.572  23.680  37.296   2.392  -0.860   0.254  O4   DFX   7  
DFX  O5   O5   O  0  1  N  N  N  34.125  22.149  34.693   0.177   2.005  -0.302  O5   DFX   8  
DFX  F2   F2   F  0  1  N  N  N  31.674  20.193  36.668  -2.404  -0.503   0.221  F2   DFX   9  
DFX  H1   H11  H  0  1  N  N  N  32.437  21.022  34.207  -1.887   2.077  -0.225  H1   DFX  10  
DFX  H12  H12  H  0  1  N  N  N  32.142  22.455  35.258  -1.083   1.519   1.262  H12  DFX  11  
DFX  H2   H2   H  0  1  N  N  N  33.611  19.894  36.045  -1.238  -0.005  -1.379  H2   DFX  12  
DFX  H3   H3   H  0  1  N  N  N  32.783  22.247  37.794  -0.031  -0.794   1.314  H3   DFX  13  
DFX  H4   H4   H  0  1  N  N  N  35.623  21.933  37.746   1.300  -0.187  -1.367  H4   DFX  14  
DFX  H51  H51  H  0  1  N  N  N  35.997  22.801  35.358   1.340   1.345   1.273  H51  DFX  15  
DFX  H52  H52  H  0  1  N  N  N  35.648  21.025  35.561   2.229   1.781  -0.207  H52  DFX  16  
DFX  HO3  HO3  H  0  1  N  N  N  33.879  19.721  38.203  -0.923  -2.590   0.009  HO3  DFX  17  
DFX  HO4  HO4  H  0  1  N  N  N  34.519  23.865  38.226   3.249  -0.510  -0.023  HO4  DFX  18  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DFX  C1  C2   SING  N  N   1  
DFX  C1  O5   SING  N  N   2  
DFX  C1  H1   SING  N  N   3  
DFX  C1  H12  SING  N  N   4  
DFX  C2  C3   SING  N  N   5  
DFX  C2  F2   SING  N  N   6  
DFX  C2  H2   SING  N  N   7  
DFX  C3  C4   SING  N  N   8  
DFX  C3  O3   SING  N  N   9  
DFX  C3  H3   SING  N  N  10  
DFX  C4  C5   SING  N  N  11  
DFX  C4  O4   SING  N  N  12  
DFX  C4  H4   SING  N  N  13  
DFX  C5  O5   SING  N  N  14  
DFX  C5  H51  SING  N  N  15  
DFX  C5  H52  SING  N  N  16  
DFX  O3  HO3  SING  N  N  17  
DFX  O4  HO4  SING  N  N  18  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DFX  SMILES            ACDLabs               10.04  "FC1COCC(O)C1O"  
DFX  SMILES_CANONICAL  CACTVS                3.341  "O[C@@H]1COC[C@H](F)[C@H]1O"  
DFX  SMILES            CACTVS                3.341  "O[CH]1COC[CH](F)[CH]1O"  
DFX  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1[C@H]([C@@H]([C@H](CO1)F)O)O"  
DFX  SMILES            "OpenEye OEToolkits"  1.5.0  "C1C(C(C(CO1)F)O)O"  
DFX  InChI             InChI                 1.03   "InChI=1S/C5H9FO3/c6-3-1-9-2-4(7)5(3)8/h3-5,7-8H,1-2H2/t3-,4+,5+/m0/s1"  
DFX  InChIKey          InChI                 1.03   YIJTWYXBSRZXRS-VPENINKCSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DFX  "SYSTEMATIC NAME"            ACDLabs               10.04  "1,5-anhydro-2-deoxy-2-fluoro-D-xylitol"  
DFX  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "(3R,4S,5S)-5-fluorooxane-3,4-diol"  
DFX  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    D-1-deoxy-Xylp2fluoro  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
DFX  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
DFX  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
DFX  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DFX  "Create component"          1999-07-08  EBI   
DFX  "Modify descriptor"         2011-06-04  RCSB  
DFX  "Other modification"        2020-07-03  RCSB  
DFX  "Modify name"               2020-07-17  RCSB  
DFX  "Modify synonyms"           2020-07-17  RCSB  
DFX  "Modify linking type"       2020-07-17  RCSB  
DFX  "Modify atom id"            2020-07-17  RCSB  
DFX  "Modify component atom id"  2020-07-17  RCSB  
##
