data_I0X
#

_chem_comp.id                                   I0X
_chem_comp.name                                 "Nalpha-[(benzyloxy)carbonyl]-N-[(1S)-1-(4-tert-butoxybenzyl)-3-diazo-2-oxopropyl]-L-phenylalaninamide"
_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H34 N4 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Z-Phe-Tyr(t-Bu)-diazomethylketone"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-11-01
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       542.625
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    I0X
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3OF9
_chem_comp.pdbx_subcomponent_list               "PHQ PHE TY1 0HQ"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
I0X  C10  C10  C   0  1  N  N  N  20.460  -21.820   3.018  -2.817   0.261   0.100  C1    PHQ   1  
I0X  O2   O2   O   0  1  N  N  N  19.314  -21.758   3.443  -2.713   0.731   1.216  O1    PHQ   2  
I0X  O3   O3   O   0  1  N  N  N  21.089  -22.979   2.638  -3.872   0.585  -0.671  O2    PHQ   3  
I0X  C11  C11  C   0  1  N  N  N  20.369  -24.239   2.730  -4.846   1.501  -0.105  C2    PHQ   4  
I0X  C12  C12  C   0  1  Y  N  N  20.968  -25.094   1.838  -5.946   1.745  -1.105  C3    PHQ   5  
I0X  C13  C13  C   0  1  Y  N  N  21.814  -26.006   2.602  -7.063   0.930  -1.117  C4    PHQ   6  
I0X  C14  C14  C   0  1  Y  N  N  22.571  -27.017   1.885  -8.072   1.153  -2.034  C5    PHQ   7  
I0X  C15  C15  C   0  1  Y  N  N  22.461  -27.082   0.457  -7.965   2.191  -2.941  C6    PHQ   8  
I0X  C16  C16  C   0  1  Y  N  N  21.625  -26.183  -0.296  -6.848   3.006  -2.929  C7    PHQ   9  
I0X  C17  C17  C   0  1  Y  N  N  20.857  -25.161   0.392  -5.842   2.787  -2.007  C8    PHQ  10  
I0X  N1   N1   N   0  1  N  N  N  21.267  -20.668   2.893  -1.876  -0.585  -0.365  N     PHE  11  
I0X  C1   C1   C   0  1  N  N  S  20.919  -19.245   3.181  -0.728  -0.937   0.475  CA    PHE  12  
I0X  C2   C2   C   0  1  N  N  N  19.912  -19.019   2.121   0.428  -1.347  -0.401  C     PHE  13  
I0X  O1   O1   O   0  1  N  N  N  19.849  -19.147   0.751   0.305  -1.345  -1.608  O     PHE  14  
I0X  C3   C3   C   0  1  N  N  N  22.047  -18.351   3.068  -1.107  -2.099   1.395  CB    PHE  15  
I0X  C4   C4   C   0  1  Y  N  N  23.301  -18.864   3.838  -2.180  -1.650   2.354  CG    PHE  16  
I0X  C9   C9   C   0  1  Y  N  N  23.186  -19.215   5.266  -3.513  -1.788   2.014  CD1   PHE  17  
I0X  C5   C5   C   0  1  Y  N  N  24.573  -18.997   3.154  -1.831  -1.096   3.572  CD2   PHE  18  
I0X  C6   C6   C   0  1  Y  N  N  24.381  -19.713   5.976  -4.497  -1.380   2.896  CE1   PHE  19  
I0X  C7   C7   C   0  1  Y  N  N  25.739  -19.490   3.896  -2.815  -0.684   4.451  CE2   PHE  20  
I0X  C8   C8   C   0  1  Y  N  N  25.640  -19.840   5.266  -4.148  -0.827   4.113  CZ    PHE  21  
I0X  N2   N2   N   0  1  N  N  N  18.660  -18.353   2.616   1.598  -1.716   0.156  N     TY1  22  
I0X  C18  C18  C   0  1  Y  N  N  15.667  -17.645   3.182   4.222  -0.407   0.295  CG    TY1  23  
I0X  O4   O4   O   0  1  N  N  N  14.292  -15.497   6.544   4.724   3.635   0.951  OH    TY1  24  
I0X  C19  C19  C   0  1  Y  N  N  14.596  -16.127   5.427   4.555   2.304   0.734  CL    TY1  25  
I0X  C20  C20  C   0  1  N  N  N  16.125  -18.302   2.025   4.036  -1.883   0.053  CZ    TY1  26  
I0X  C23  C23  C   0  1  N  N  N  14.342  -13.825   8.433   6.739   3.930  -0.349  CAA   TY1  27  
I0X  C22  C22  C   0  1  N  N  N  16.532  -14.109   7.117   5.305   5.880   0.271  CAB   TY1  28  
I0X  C21  C21  C   0  1  N  N  N  14.594  -13.064   6.111   4.482   4.201  -1.385  CAC   TY1  29  
I0X  C24  C24  C   0  1  N  N  N  14.979  -14.177   7.094   5.302   4.398  -0.109  CBL   TY1  30  
I0X  C26  C26  C   0  1  N  N  N  17.669  -16.379   1.472   2.594  -3.575  -1.045  C     TY1  31  
I0X  C25  C25  C   0  1  N  N  S  17.581  -17.943   1.545   2.721  -2.115  -0.695  CA    TY1  32  
I0X  C27  C27  C   0  1  Y  N  N  14.637  -16.648   2.946   4.881   0.368  -0.642  CD1   TY1  33  
I0X  C28  C28  C   0  1  Y  N  N  16.221  -17.962   4.475   3.730   0.171   1.451  CD2   TY1  34  
I0X  C29  C29  C   0  1  Y  N  N  14.153  -15.946   4.054   5.048   1.722  -0.425  CE1   TY1  35  
I0X  C30  C30  C   0  1  Y  N  N  15.725  -17.244   5.596   3.900   1.524   1.674  CE2   TY1  36  
I0X  O5   O5   O   0  1  N  N  N  17.011  -15.724   0.668   1.828  -4.285  -0.421  O     TY1  37  
I0X  C31  C31  C   0  1  N  N  N  18.493  -15.667   2.257   3.351  -4.110  -2.081  C1    0HQ  38  
I0X  N3   N3   N   1  1  N  Y  N  19.356  -14.820   1.421   3.244  -5.322  -2.371  N1    0HQ  39  
I0X  N4   N4   N  -1  1  N  Y  N  20.162  -13.952   0.719   3.149  -6.411  -2.632  N2    0HQ  40  
I0X  H10  H10  H   0  1  N  N  N  20.429  -24.643   3.751  -5.268   1.067   0.802  H21   PHQ  41  
I0X  H11  H11  H   0  1  N  N  N  19.309  -24.096   2.474  -4.358   2.445   0.137  H22   PHQ  42  
I0X  H13  H13  H   0  1  N  N  N  21.876  -25.930   3.678  -7.146   0.118  -0.409  H41   PHQ  43  
I0X  H14  H14  H   0  1  N  N  N  23.206  -27.708   2.419  -8.944   0.516  -2.044  H51   PHQ  44  
I0X  H15  H15  H   0  1  N  N  N  23.026  -27.833  -0.074  -8.753   2.366  -3.658  H61   PHQ  45  
I0X  H16  H16  H   0  1  N  N  N  21.569  -26.269  -1.371  -6.765   3.817  -3.638  H71   PHQ  46  
I0X  H17  H17  H   0  1  N  N  N  20.225  -24.475  -0.153  -4.970   3.424  -1.998  H81   PHQ  47  
I0X  H1   H1   H   0  1  N  N  N  22.199  -20.827   2.567  -1.957  -0.957  -1.257  H     PHE  48  
I0X  H2   H2   H   0  1  N  N  N  20.572  -19.057   4.208  -0.440  -0.075   1.077  HA    PHE  49  
I0X  H3   H3   H   0  1  N  N  N  22.308  -18.254   2.004  -1.480  -2.930   0.797  HB2   PHE  50  
I0X  H4   H4   H   0  1  N  N  N  21.759  -17.374   3.484  -0.230  -2.419   1.956  HB3   PHE  51  
I0X  H9   H9   H   0  1  N  N  N  22.244  -19.110   5.783  -3.785  -2.217   1.061  HD1   PHE  52  
I0X  H5   H5   H   0  1  N  N  N  24.661  -18.736   2.110  -0.790  -0.984   3.835  HD2   PHE  53  
I0X  H6   H6   H   0  1  N  N  N  24.318  -19.982   7.020  -5.538  -1.491   2.632  HE1   PHE  54  
I0X  H7   H7   H   0  1  N  N  N  26.688  -19.588   3.390  -2.542  -0.252   5.402  HE2   PHE  55  
I0X  H8   H8   H   0  1  N  N  N  26.512  -20.206   5.788  -4.916  -0.505   4.801  HZ    PHE  56  
I0X  H12  H12  H   0  1  N  N  N  18.517  -18.176   3.590   1.696  -1.718   1.121  H     TY1  57  
I0X  H18  H18  H   0  1  N  N  N  16.109  -19.382   2.236   4.865  -2.261  -0.544  HZ    TY1  58  
I0X  H19  H19  H   0  1  N  N  N  15.438  -18.038   1.207   4.007  -2.407   1.009  HZA   TY1  59  
I0X  H26  H26  H   0  1  N  N  N  14.806  -12.911   8.831   6.746   2.855  -0.530  HAA   TY1  60  
I0X  H27  H27  H   0  1  N  N  N  13.264  -13.658   8.293   7.149   4.447  -1.217  HAAA  TY1  61  
I0X  H28  H28  H   0  1  N  N  N  14.496  -14.653   9.141   7.346   4.155   0.528  HAAB  TY1  62  
I0X  H23  H23  H   0  1  N  N  N  16.851  -13.137   7.522   5.890   6.020   1.181  HAB   TY1  63  
I0X  H24  H24  H   0  1  N  N  N  16.925  -14.918   7.751   5.747   6.462  -0.538  HABA  TY1  64  
I0X  H25  H25  H   0  1  N  N  N  16.919  -14.224   6.094   4.282   6.213   0.442  HABB  TY1  65  
I0X  H20  H20  H   0  1  N  N  N  15.042  -12.114   6.438   3.485   4.618  -1.245  HAC   TY1  66  
I0X  H21  H21  H   0  1  N  N  N  14.964  -13.318   5.107   4.974   4.708  -2.216  HACA  TY1  67  
I0X  H22  H22  H   0  1  N  N  N  13.499  -12.962   6.083   4.403   3.136  -1.606  HACB  TY1  68  
I0X  H29  H29  H   0  1  N  N  N  17.767  -18.460   0.592   2.714  -1.520  -1.609  HA    TY1  69  
I0X  H30  H30  H   0  1  N  N  N  14.260  -16.456   1.952   5.265  -0.086  -1.544  HD1   TY1  70  
I0X  H31  H31  H   0  1  N  N  N  16.985  -18.717   4.587   3.213  -0.436   2.179  HD2   TY1  71  
I0X  H32  H32  H   0  1  N  N  N  13.386  -15.207   3.875   5.562   2.327  -1.158  HE1   TY1  72  
I0X  H33  H33  H   0  1  N  N  N  16.118  -17.457   6.579   3.515   1.974   2.578  HE2   TY1  73  
I0X  H34  H34  H   0  1  N  N  N  18.518  -15.710   3.336   4.030  -3.480  -2.635  H1    0HQ  74  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
I0X  N1   C10  SING  N  N   1  
I0X  N1   C1   SING  N  N   2  
I0X  N1   H1   SING  N  N   3  
I0X  O1   C2   DOUB  N  N   4  
I0X  C1   H2   SING  N  N   5  
I0X  C2   C1   SING  N  N   6  
I0X  C2   N2   SING  N  N   7  
I0X  C3   C1   SING  N  N   8  
I0X  C3   C4   SING  N  N   9  
I0X  C3   H3   SING  N  N  10  
I0X  C3   H4   SING  N  N  11  
I0X  C4   C9   DOUB  Y  N  12  
I0X  C5   C4   SING  Y  N  13  
I0X  C5   C7   DOUB  Y  N  14  
I0X  C5   H5   SING  N  N  15  
I0X  C6   H6   SING  N  N  16  
I0X  C7   C8   SING  Y  N  17  
I0X  C7   H7   SING  N  N  18  
I0X  C8   C6   DOUB  Y  N  19  
I0X  C8   H8   SING  N  N  20  
I0X  C9   C6   SING  Y  N  21  
I0X  C9   H9   SING  N  N  22  
I0X  C10  O2   DOUB  N  N  23  
I0X  C11  H10  SING  N  N  24  
I0X  C11  H11  SING  N  N  25  
I0X  N2   H12  SING  N  N  26  
I0X  O3   C10  SING  N  N  27  
I0X  O3   C11  SING  N  N  28  
I0X  C12  C11  SING  N  N  29  
I0X  C12  C13  DOUB  Y  N  30  
I0X  C13  H13  SING  N  N  31  
I0X  O4   C24  SING  N  N  32  
I0X  C14  C13  SING  Y  N  33  
I0X  C14  H14  SING  N  N  34  
I0X  O5   C26  DOUB  N  N  35  
I0X  C15  C14  DOUB  Y  N  36  
I0X  C15  H15  SING  N  N  37  
I0X  C16  C15  SING  Y  N  38  
I0X  C16  C17  DOUB  Y  N  39  
I0X  C16  H16  SING  N  N  40  
I0X  C17  C12  SING  Y  N  41  
I0X  C17  H17  SING  N  N  42  
I0X  C18  C28  DOUB  Y  N  43  
I0X  C19  O4   SING  N  N  44  
I0X  C19  C30  DOUB  Y  N  45  
I0X  C20  C18  SING  N  N  46  
I0X  C20  H18  SING  N  N  47  
I0X  C20  H19  SING  N  N  48  
I0X  C21  C24  SING  N  N  49  
I0X  C21  H20  SING  N  N  50  
I0X  C21  H21  SING  N  N  51  
I0X  C21  H22  SING  N  N  52  
I0X  C22  H23  SING  N  N  53  
I0X  C22  H24  SING  N  N  54  
I0X  C22  H25  SING  N  N  55  
I0X  C23  H26  SING  N  N  56  
I0X  C23  H27  SING  N  N  57  
I0X  C23  H28  SING  N  N  58  
I0X  C24  C22  SING  N  N  59  
I0X  C24  C23  SING  N  N  60  
I0X  C25  N2   SING  N  N  61  
I0X  C25  C20  SING  N  N  62  
I0X  C25  H29  SING  N  N  63  
I0X  C26  C25  SING  N  N  64  
I0X  C26  C31  SING  N  N  65  
I0X  C27  C18  SING  Y  N  66  
I0X  C27  C29  DOUB  Y  N  67  
I0X  C27  H30  SING  N  N  68  
I0X  C28  C30  SING  Y  N  69  
I0X  C28  H31  SING  N  N  70  
I0X  C29  C19  SING  Y  N  71  
I0X  C29  H32  SING  N  N  72  
I0X  C30  H33  SING  N  N  73  
I0X  N3   C31  DOUB  N  N  74  
I0X  C31  H34  SING  N  N  75  
I0X  N3   N4   DOUB  N  N  76  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
I0X  SMILES            ACDLabs               12.01  "O=C(OCc1ccccc1)NC(C(=O)NC(C(=O)\\C=[N+]=[N-])Cc2ccc(OC(C)(C)C)cc2)Cc3ccccc3"  
I0X  InChI             InChI                 1.03   "InChI=1S/C31H34N4O5/c1-31(2,3)40-25-16-14-23(15-17-25)18-26(28(36)20-33-32)34-29(37)27(19-22-10-6-4-7-11-22)35-30(38)39-21-24-12-8-5-9-13-24/h4-17,20,26-27H,18-19,21H2,1-3H3,(H,34,37)(H,35,38)/t26-,27-/m0/s1"  
I0X  InChIKey          InChI                 1.03   CGONKNHDBTYOOC-SVBPBHIXSA-N  
I0X  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(C)Oc1ccc(C[C@H](NC(=O)[C@H](Cc2ccccc2)NC(=O)OCc3ccccc3)C(=O)C=[N+]=[N-])cc1"  
I0X  SMILES            CACTVS                3.385  "CC(C)(C)Oc1ccc(C[CH](NC(=O)[CH](Cc2ccccc2)NC(=O)OCc3ccccc3)C(=O)C=[N+]=[N-])cc1"  
I0X  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.5  "CC(C)(C)Oc1ccc(cc1)C[C@@H](C(=O)C=[N+]=[N-])NC(=O)[C@H](Cc2ccccc2)NC(=O)OCc3ccccc3"  
I0X  SMILES            "OpenEye OEToolkits"  1.7.5  "CC(C)(C)Oc1ccc(cc1)CC(C(=O)C=[N+]=[N-])NC(=O)C(Cc2ccccc2)NC(=O)OCc3ccccc3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
I0X  "SYSTEMATIC NAME"  ACDLabs               12.01  "Nalpha-[(benzyloxy)carbonyl]-N-[(2S)-1-(4-tert-butoxyphenyl)-4-diazo-3-oxobutan-2-yl]-L-phenylalaninamide"  
I0X  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "phenylmethyl N-[(2S)-1-[[(2S)-4-diazo-1-[4-[(2-methylpropan-2-yl)oxy]phenyl]-3-oxo-butan-2-yl]amino]-1-oxo-3-phenyl-propan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
I0X  "Create component"   2010-11-01  RCSB  
I0X  "Modify descriptor"  2011-06-04  RCSB  
I0X  "Modify descriptor"  2012-01-05  RCSB  
I0X  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     I0X
_pdbx_chem_comp_synonyms.name        "Z-Phe-Tyr(t-Bu)-diazomethylketone"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
