data_JMX
# 
_chem_comp.id                                    JMX 
_chem_comp.name                                  "(2S)-3-[1-[(4-bromophenyl)methyl]indol-3-yl]-2-(methylamino)propanoic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C19 H19 Br N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         SC45647 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-05 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        387.270 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JMX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZL3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JMX CA  CA  C  0 1 N N S Y N N 445.989 367.787 296.268 -4.615 -0.996 -0.101 CA  JMX 1  
JMX C1  C1  C  0 1 N N N N N N 445.913 367.414 298.909 -5.967 0.807  -0.985 C1  JMX 2  
JMX C   C   C  0 1 N N N Y N Y 445.858 369.393 296.424 -5.639 -1.980 0.401  C   JMX 3  
JMX CB  CB  C  0 1 N N N N N N 444.513 367.228 296.016 -3.300 -1.199 0.655  CB  JMX 4  
JMX CG  CG  C  0 1 Y N N N N N 444.631 365.639 295.603 -2.241 -0.300 0.069  CG  JMX 5  
JMX CD1 CD1 C  0 1 Y N N N N N 444.796 365.300 294.408 -1.344 -0.632 -0.872 CD1 JMX 6  
JMX CD2 CD2 C  0 1 Y N N N N N 444.551 364.626 296.610 -1.999 1.102  0.416  CD2 JMX 7  
JMX CE3 CE3 C  0 1 Y N N N N N 444.387 364.420 297.990 -2.594 1.999  1.306  CE3 JMX 8  
JMX CE2 CE2 C  0 1 Y N N N N N 444.719 363.219 295.746 -0.918 1.519  -0.381 CE2 JMX 9  
JMX CZ3 CZ3 C  0 1 Y N N N N N 444.365 363.152 298.611 -2.123 3.278  1.398  CZ3 JMX 10 
JMX C2  C2  C  0 1 N N N N N N 445.074 363.151 292.915 0.548  0.446  -2.131 C2  JMX 11 
JMX CZ2 CZ2 C  0 1 Y N N N N N 444.692 361.860 296.409 -0.454 2.826  -0.271 CZ2 JMX 12 
JMX CH2 CH2 C  0 1 Y N N N N N 444.505 361.855 297.925 -1.056 3.694  0.613  CH2 JMX 13 
JMX C3  C3  C  0 1 Y N N N N N 443.743 362.263 292.639 1.850  0.155  -1.431 C3  JMX 14 
JMX C4  C4  C  0 1 Y N N N N N 442.482 362.842 292.796 2.285  -1.151 -1.297 C4  JMX 15 
JMX C5  C5  C  0 1 Y N N N N N 441.162 361.964 292.523 3.480  -1.419 -0.656 C5  JMX 16 
JMX C6  C6  C  0 1 Y N N N N N 441.281 360.634 292.133 4.241  -0.381 -0.149 C6  JMX 17 
JMX C7  C7  C  0 1 Y N N N N N 442.739 359.971 291.957 3.805  0.925  -0.284 C7  JMX 18 
JMX C8  C8  C  0 1 Y N N N N N 443.885 360.725 292.190 2.613  1.193  -0.930 C8  JMX 19 
JMX N   N   N  0 1 N N N Y Y N 446.576 367.152 297.537 -5.101 0.372  0.119  N   JMX 20 
JMX NE1 NE1 N  0 1 Y N N N N N 444.877 363.912 294.248 -0.543 0.442  -1.153 NE1 JMX 21 
JMX O   O   O  0 1 N N N Y N Y 444.796 369.890 296.854 -6.669 -1.583 0.892  O   JMX 22 
JMX BR1 BR1 BR 0 0 N N N N N N 439.609 359.519 291.783 5.875  -0.747 0.729  BR1 JMX 23 
JMX HA  HA  H  0 1 N N N Y N N 446.622 367.558 295.398 -4.449 -1.156 -1.167 HA  JMX 24 
JMX H5  H2  H  0 1 N N N N N N 446.469 366.880 299.694 -5.406 0.782  -1.919 H2  JMX 25 
JMX H3  H3  H  0 1 N N N N N N 445.924 368.493 299.121 -6.825 0.139  -1.058 H3  JMX 26 
JMX H4  H4  H  0 1 N N N N N N 444.873 367.055 298.888 -6.313 1.824  -0.796 H4  JMX 27 
JMX HB1 HB1 H  0 1 N N N N N N 444.036 367.791 295.200 -3.444 -0.953 1.707  HB1 JMX 28 
JMX HB2 HB2 H  0 1 N N N N N N 443.914 367.331 296.933 -2.985 -2.238 0.564  HB2 JMX 29 
JMX H8  H8  H  0 1 N N N N N N 444.868 366.002 293.591 -1.265 -1.602 -1.339 H8  JMX 30 
JMX H9  H9  H  0 1 N N N N N N 444.270 365.290 298.618 -3.425 1.682  1.920  H9  JMX 31 
JMX H10 H10 H  0 1 N N N N N N 444.234 363.131 299.683 -2.584 3.970  2.087  H10 JMX 32 
JMX H11 H11 H  0 1 N N N N N N 445.953 362.493 292.988 0.603  1.424  -2.609 H11 JMX 33 
JMX H12 H12 H  0 1 N N N N N N 445.220 363.869 292.094 0.361  -0.317 -2.886 H12 JMX 34 
JMX H13 H13 H  0 1 N N N N N N 444.799 360.946 295.843 0.375  3.160  -0.877 H13 JMX 35 
JMX H14 H14 H  0 1 N N N N N N 444.476 360.928 298.478 -0.695 4.708  0.697  H14 JMX 36 
JMX H15 H15 H  0 1 N N N N N N 442.393 363.875 293.099 1.691  -1.961 -1.692 H15 JMX 37 
JMX H16 H16 H  0 1 N N N N N N 440.184 362.407 292.642 3.819  -2.438 -0.550 H16 JMX 38 
JMX H17 H17 H  0 1 N N N N N N 442.827 358.937 291.657 4.399  1.736  0.112  H17 JMX 39 
JMX H18 H18 H  0 1 N N N N N N 444.862 360.281 292.070 2.273  2.213  -1.035 H18 JMX 40 
JMX H   H   H  0 1 N Y N Y Y N 446.566 366.162 297.396 -5.578 0.448  1.005  H   JMX 41 
JMX OXT OXT O  0 1 N Y N Y N Y ?       ?       ?       -5.408 -3.299 0.303  OXT JMX 42 
JMX HXT HXT H  0 1 N Y N Y N Y ?       ?       ?       -6.095 -3.891 0.638  HXT JMX 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JMX BR1 C6  SING N N 1  
JMX C7  C6  DOUB Y N 2  
JMX C7  C8  SING Y N 3  
JMX C6  C5  SING Y N 4  
JMX C8  C3  DOUB Y N 5  
JMX C5  C4  DOUB Y N 6  
JMX C3  C4  SING Y N 7  
JMX C3  C2  SING N N 8  
JMX C2  NE1 SING N N 9  
JMX NE1 CD1 SING Y N 10 
JMX NE1 CE2 SING Y N 11 
JMX CD1 CG  DOUB Y N 12 
JMX CG  CB  SING N N 13 
JMX CG  CD2 SING Y N 14 
JMX CE2 CZ2 SING Y N 15 
JMX CE2 CD2 DOUB Y N 16 
JMX CB  CA  SING N N 17 
JMX CA  C   SING N N 18 
JMX CA  N   SING N N 19 
JMX CZ2 CH2 DOUB Y N 20 
JMX C   O   DOUB N N 21 
JMX CD2 CE3 SING Y N 22 
JMX N   C1  SING N N 23 
JMX CH2 CZ3 SING Y N 24 
JMX CE3 CZ3 DOUB Y N 25 
JMX CA  HA  SING N N 26 
JMX C1  H5  SING N N 27 
JMX C1  H3  SING N N 28 
JMX C1  H4  SING N N 29 
JMX CB  HB1 SING N N 30 
JMX CB  HB2 SING N N 31 
JMX CD1 H8  SING N N 32 
JMX CE3 H9  SING N N 33 
JMX CZ3 H10 SING N N 34 
JMX C2  H11 SING N N 35 
JMX C2  H12 SING N N 36 
JMX CZ2 H13 SING N N 37 
JMX CH2 H14 SING N N 38 
JMX C4  H15 SING N N 39 
JMX C5  H16 SING N N 40 
JMX C7  H17 SING N N 41 
JMX C8  H18 SING N N 42 
JMX N   H   SING N N 43 
JMX C   OXT SING N N 44 
JMX OXT HXT SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JMX InChI            InChI                1.06  "InChI=1S/C19H19BrN2O2/c1-21-17(19(23)24)10-14-12-22(18-5-3-2-4-16(14)18)11-13-6-8-15(20)9-7-13/h2-9,12,17,21H,10-11H2,1H3,(H,23,24)/t17-/m0/s1" 
JMX InChIKey         InChI                1.06  GEVMMIKHVGIGMB-KRWDZBQOSA-N                                                                                                                      
JMX SMILES_CANONICAL CACTVS               3.385 "CN[C@@H](Cc1cn(Cc2ccc(Br)cc2)c3ccccc13)C(O)=O"                                                                                                  
JMX SMILES           CACTVS               3.385 "CN[CH](Cc1cn(Cc2ccc(Br)cc2)c3ccccc13)C(O)=O"                                                                                                    
JMX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN[C@@H](Cc1cn(c2c1cccc2)Cc3ccc(cc3)Br)C(=O)O"                                                                                                  
JMX SMILES           "OpenEye OEToolkits" 2.0.7 "CNC(Cc1cn(c2c1cccc2)Cc3ccc(cc3)Br)C(=O)O"                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           JMX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-3-[1-[(4-bromophenyl)methyl]indol-3-yl]-2-(methylamino)propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JMX "Create component"     2022-06-20 PDBE 
JMX "Modify descriptor"    2022-08-22 RCSB 
JMX "Modify internal type" 2023-01-13 PDBE 
JMX "Initial release"      2023-03-22 RCSB 
JMX "Modify backbone"      2023-11-03 PDBE 
# 
