data_VOX
# 
_chem_comp.id                                    VOX 
_chem_comp.name                                  "~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-7-[4-[2-(4-methylphenyl)hydrazinyl]phenyl]heptanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C35 H52 N6 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-22 
_chem_comp.pdbx_modified_date                    2023-12-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        652.824 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VOX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OI1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VOX C4  C1  C 0 1 N N N N N N 56.850 -134.608 34.556 -1.158  1.840  -0.168 C4  VOX 1  
VOX C5  C2  C 0 1 N N N N N N 55.759 -133.820 33.897 -2.506  1.116  -0.137 C5  VOX 2  
VOX C6  C3  C 0 1 N N N N N N 54.767 -133.473 34.982 -3.616  2.088  -0.543 C6  VOX 3  
VOX C7  C4  C 0 1 N N N N N N 53.360 -133.594 34.436 -4.964  1.364  -0.512 C7  VOX 4  
VOX C8  C5  C 0 1 N N N N N N 52.896 -132.262 33.881 -6.074  2.336  -0.918 C8  VOX 5  
VOX C10 C6  C 0 1 Y N N N N N 50.737 -132.152 32.847 -8.152  1.613  0.274  C10 VOX 6  
VOX C13 C7  C 0 1 Y N N N N N 51.768 -133.630 30.765 -9.076  0.317  -1.992 C13 VOX 7  
VOX C17 C8  C 0 1 Y N N N N N 46.620 -133.585 28.272 -13.802 -1.060 1.577  C17 VOX 8  
VOX C20 C9  C 0 1 N N N N N N 46.138 -135.560 25.215 -16.784 -3.116 0.516  C20 VOX 9  
VOX C22 C10 C 0 1 Y N N N N N 47.915 -135.559 26.792 -14.715 -2.377 -0.682 C22 VOX 10 
VOX C24 C11 C 0 1 Y N N N N N 52.584 -133.299 31.818 -7.866  0.981  -2.020 C24 VOX 11 
VOX C26 C12 C 0 1 N N S N N N 61.555 -134.903 35.449 3.698   1.611  0.501  C26 VOX 12 
VOX C36 C13 C 0 1 N N N N N N 63.055 -136.922 43.161 9.867   -2.677 2.064  C36 VOX 13 
VOX C34 C14 C 0 1 N N S N N N 63.293 -136.177 41.916 8.805   -1.607 2.324  C34 VOX 14 
VOX C35 C15 C 0 1 N N N N N N 63.595 -134.759 42.305 7.961   -2.001 3.537  C35 VOX 15 
VOX N33 N1  N 0 1 N N N N N N 62.120 -136.172 41.068 7.936   -1.509 1.119  N33 VOX 16 
VOX C31 C16 C 0 1 N N N N N N 62.305 -136.289 39.716 7.844   -0.232 0.618  C31 VOX 17 
VOX O32 O1  O 0 1 N N N N N N 63.450 -136.424 39.301 8.436   0.688  1.141  O32 VOX 18 
VOX C37 C17 C 0 1 N N N N N N 62.670 -138.321 42.831 11.013  -2.070 1.252  C37 VOX 19 
VOX C38 C18 C 0 1 N N N N N N 61.312 -138.512 42.854 10.626  -2.020 -0.204 C38 VOX 20 
VOX O39 O2  O 0 1 N N N N N N 60.647 -138.316 43.858 9.584   -2.511 -0.584 O39 VOX 21 
VOX N40 N2  N 0 1 N N N N N N 60.739 -139.010 41.710 11.471  -1.410 -1.087 N40 VOX 22 
VOX C41 C19 C 0 1 N N N N N N 59.312 -139.219 41.621 11.016  -1.403 -2.497 C41 VOX 23 
VOX C42 C20 C 0 1 N N N N N N 58.876 -138.900 40.228 10.054  -0.229 -2.694 C42 VOX 24 
VOX C43 C21 C 0 1 N N S N N N 59.272 -137.528 39.830 8.630   -0.676 -2.359 C43 VOX 25 
VOX O44 O3  O 0 1 N N N N N N 58.232 -137.031 39.045 7.975   -1.112 -3.552 O44 VOX 26 
VOX C45 C22 C 0 1 N N N N N N 60.491 -137.599 38.977 7.857   0.497  -1.753 C45 VOX 27 
VOX C30 C23 C 0 1 N N S N N N 61.188 -136.273 38.897 6.985   -0.007 -0.601 C30 VOX 28 
VOX N29 N3  N 0 1 N N N N N N 61.565 -136.056 37.513 5.955   0.989  -0.295 N29 VOX 29 
VOX C27 C24 C 0 1 N N N N N N 61.135 -135.010 36.866 4.802   0.608  0.288  C27 VOX 30 
VOX O28 O4  O 0 1 N N N N N N 60.408 -134.179 37.354 4.652   -0.543 0.642  O28 VOX 31 
VOX C46 C25 C 0 1 N N R N N N 62.563 -133.843 35.445 3.918   2.337  1.830  C46 VOX 32 
VOX C48 C26 C 0 1 N N N N N N 63.634 -134.328 36.364 5.192   3.180  1.746  C48 VOX 33 
VOX O47 O5  O 0 1 N N N N N N 63.073 -133.779 34.156 2.801   3.187  2.099  O47 VOX 34 
VOX N25 N4  N 0 1 N N N N N N 60.439 -134.452 34.644 2.407   0.918  0.531  N25 VOX 35 
VOX C1  C27 C 0 1 N N N N N N 59.232 -134.981 34.757 1.279   1.581  0.208  C1  VOX 36 
VOX O2  O6  O 0 1 N N N N N N 58.938 -135.853 35.555 1.332   2.750  -0.108 O2  VOX 37 
VOX C3  C28 C 0 1 N N N N N N 58.174 -134.407 33.851 -0.048  0.868  0.238  C3  VOX 38 
VOX C9  C29 C 0 1 Y N N N N N 52.061 -132.558 32.847 -7.401  1.623  -0.887 C9  VOX 39 
VOX C11 C30 C 0 1 Y N N N N N 49.918 -132.484 31.786 -9.366  0.956  0.307  C11 VOX 40 
VOX C12 C31 C 0 1 Y N N N N N 50.454 -133.224 30.754 -9.833  0.305  -0.828 C12 VOX 41 
VOX N14 N5  N 0 1 N N N N N N 49.749 -133.585 29.713 -11.058 -0.366 -0.796 N14 VOX 42 
VOX N15 N6  N 0 1 N N N N N N 48.417 -133.638 29.793 -11.820 -0.377 0.380  N15 VOX 43 
VOX C16 C32 C 0 1 Y N N N N N 47.839 -134.078 28.689 -13.045 -1.048 0.412  C16 VOX 44 
VOX C18 C33 C 0 1 Y N N N N N 46.056 -134.085 27.108 -15.009 -1.729 1.607  C18 VOX 45 
VOX C19 C34 C 0 1 Y N N N N N 46.702 -135.065 26.373 -15.465 -2.387 0.479  C19 VOX 46 
VOX C23 C35 C 0 1 Y N N N N N 48.475 -135.062 27.948 -13.509 -1.705 -0.721 C23 VOX 47 
VOX H1  H1  H 0 1 N N N N N N 56.588 -135.676 34.529 -0.967  2.209  -1.176 H1  VOX 48 
VOX H2  H2  H 0 1 N N N N N N 56.947 -134.281 35.602 -1.180  2.678  0.528  H2  VOX 49 
VOX H3  H3  H 0 1 N N N N N N 56.169 -132.903 33.450 -2.484  0.277  -0.833 H3  VOX 50 
VOX H4  H4  H 0 1 N N N N N N 55.273 -134.423 33.116 -2.697  0.747  0.871  H4  VOX 51 
VOX H5  H5  H 0 1 N N N N N N 54.893 -134.164 35.829 -3.638  2.926  0.153  H5  VOX 52 
VOX H6  H6  H 0 1 N N N N N N 54.941 -132.441 35.322 -3.425  2.457  -1.551 H6  VOX 53 
VOX H7  H7  H 0 1 N N N N N N 52.682 -133.906 35.244 -4.942  0.525  -1.208 H7  VOX 54 
VOX H8  H8  H 0 1 N N N N N N 53.345 -134.347 33.634 -5.155  0.995  0.496  H8  VOX 55 
VOX H9  H9  H 0 1 N N N N N N 53.756 -131.677 33.523 -6.095  3.174  -0.222 H9  VOX 56 
VOX H10 H10 H 0 1 N N N N N N 52.360 -131.691 34.654 -5.883  2.704  -1.926 H10 VOX 57 
VOX H11 H11 H 0 1 N N N N N N 50.346 -131.578 33.674 -7.786  2.115  1.157  H11 VOX 58 
VOX H12 H12 H 0 1 N N N N N N 52.159 -134.211 29.943 -9.439  -0.185 -2.878 H12 VOX 59 
VOX H13 H13 H 0 1 N N N N N N 46.113 -132.822 28.843 -13.444 -0.550 2.459  H13 VOX 60 
VOX H14 H14 H 0 1 N N N N N N 45.501 -136.424 25.457 -16.620 -4.147 0.828  H14 VOX 61 
VOX H15 H15 H 0 1 N N N N N N 45.529 -134.777 24.740 -17.452 -2.624 1.222  H15 VOX 62 
VOX H16 H16 H 0 1 N N N N N N 46.935 -135.874 24.524 -17.233 -3.105 -0.478 H16 VOX 63 
VOX H17 H17 H 0 1 N N N N N N 48.421 -136.325 26.223 -15.076 -2.888 -1.562 H17 VOX 64 
VOX H18 H18 H 0 1 N N N N N N 53.616 -133.615 31.836 -7.281  0.998  -2.928 H18 VOX 65 
VOX H19 H19 H 0 1 N N N N N N 61.967 -135.854 35.081 3.703   2.335  -0.313 H19 VOX 66 
VOX H20 H20 H 0 1 N N N N N N 63.973 -136.927 43.768 10.251  -3.046 3.014  H20 VOX 67 
VOX H21 H21 H 0 1 N N N N N N 62.244 -136.441 43.727 9.423   -3.501 1.506  H21 VOX 68 
VOX H22 H22 H 0 1 N N N N N N 64.153 -136.604 41.379 9.287   -0.647 2.508  H22 VOX 69 
VOX H23 H23 H 0 1 N N N N N N 64.485 -134.737 42.951 8.604   -2.092 4.413  H23 VOX 70 
VOX H24 H24 H 0 1 N N N N N N 63.785 -134.163 41.400 7.206   -1.237 3.719  H24 VOX 71 
VOX H25 H25 H 0 1 N N N N N N 62.737 -134.337 42.849 7.472   -2.957 3.345  H25 VOX 72 
VOX H26 H26 H 0 1 N N N N N N 61.203 -136.086 41.457 7.482   -2.271 0.726  H26 VOX 73 
VOX H27 H27 H 0 1 N N N N N N 63.134 -138.997 43.565 11.217  -1.061 1.608  H27 VOX 74 
VOX H28 H28 H 0 1 N N N N N N 63.043 -138.561 41.824 11.906  -2.684 1.369  H28 VOX 75 
VOX H29 H29 H 0 1 N N N N N N 61.319 -139.232 40.926 12.310  -1.009 -0.811 H29 VOX 76 
VOX H30 H30 H 0 1 N N N N N N 58.795 -138.559 42.333 11.874  -1.288 -3.158 H30 VOX 77 
VOX H31 H31 H 0 1 N N N N N N 59.075 -140.268 41.854 10.505  -2.339 -2.721 H31 VOX 78 
VOX H32 H32 H 0 1 N N N N N N 57.781 -138.986 40.169 10.342  0.591  -2.036 H32 VOX 79 
VOX H33 H33 H 0 1 N N N N N N 59.339 -139.619 39.536 10.096  0.105  -3.731 H33 VOX 80 
VOX H34 H34 H 0 1 N N N N N N 59.456 -136.903 40.717 8.665   -1.497 -1.643 H34 VOX 81 
VOX H35 H35 H 0 1 N N N N N N 57.440 -136.975 39.566 8.411   -1.855 -3.991 H35 VOX 82 
VOX H36 H36 H 0 1 N N N N N N 60.199 -137.911 37.963 8.560   1.241  -1.378 H36 VOX 83 
VOX H37 H37 H 0 1 N N N N N N 61.182 -138.340 39.404 7.224   0.949  -2.516 H37 VOX 84 
VOX H38 H38 H 0 1 N N N N N N 60.489 -135.485 39.215 6.510   -0.945 -0.888 H38 VOX 85 
VOX H39 H39 H 0 1 N N N N N N 62.160 -136.715 37.052 6.103   1.922  -0.513 H39 VOX 86 
VOX H40 H40 H 0 1 N N N N N N 62.147 -132.885 35.789 4.018   1.605  2.632  H40 VOX 87 
VOX H41 H41 H 0 1 N N N N N N 63.241 -134.383 37.390 5.131   3.845  0.885  H41 VOX 88 
VOX H42 H42 H 0 1 N N N N N N 63.966 -135.327 36.045 5.297   3.771  2.655  H42 VOX 89 
VOX H43 H43 H 0 1 N N N N N N 64.485 -133.632 36.335 6.055   2.523  1.637  H43 VOX 90 
VOX H44 H44 H 0 1 N N N N N N 63.735 -133.099 34.110 1.957   2.719  2.166  H44 VOX 91 
VOX H45 H45 H 0 1 N N N N N N 60.586 -133.717 33.982 2.365   -0.018 0.784  H45 VOX 92 
VOX H46 H46 H 0 1 N N N N N N 58.174 -134.934 32.885 -0.240  0.499  1.246  H46 VOX 93 
VOX H47 H47 H 0 1 N N N N N N 58.357 -133.335 33.684 -0.027  0.030  -0.458 H47 VOX 94 
VOX H48 H48 H 0 1 N N N N N N 48.884 -132.172 31.765 -9.952  0.948  1.214  H48 VOX 95 
VOX H49 H49 H 0 1 N N N N N N 50.059 -134.501 29.458 -11.381 -0.824 -1.587 H49 VOX 96 
VOX H50 H50 H 0 1 N N N N N N 48.075 -132.718 29.984 -11.497 0.081  1.172  H50 VOX 97 
VOX H51 H51 H 0 1 N N N N N N 45.103 -133.706 26.771 -15.598 -1.739 2.512  H51 VOX 98 
VOX H52 H52 H 0 1 N N N N N N 49.427 -135.446 28.283 -12.922 -1.697 -1.628 H52 VOX 99 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VOX C20 C19 SING N N 1   
VOX C19 C22 DOUB Y N 2   
VOX C19 C18 SING Y N 3   
VOX C22 C23 SING Y N 4   
VOX C18 C17 DOUB Y N 5   
VOX C23 C16 DOUB Y N 6   
VOX C17 C16 SING Y N 7   
VOX C16 N15 SING N N 8   
VOX N14 N15 SING N N 9   
VOX N14 C12 SING N N 10  
VOX C12 C13 DOUB Y N 11  
VOX C12 C11 SING Y N 12  
VOX C13 C24 SING Y N 13  
VOX C11 C10 DOUB Y N 14  
VOX C24 C9  DOUB Y N 15  
VOX C10 C9  SING Y N 16  
VOX C9  C8  SING N N 17  
VOX C3  C4  SING N N 18  
VOX C3  C1  SING N N 19  
VOX C8  C7  SING N N 20  
VOX C5  C4  SING N N 21  
VOX C5  C6  SING N N 22  
VOX O47 C46 SING N N 23  
VOX C7  C6  SING N N 24  
VOX N25 C1  SING N N 25  
VOX N25 C26 SING N N 26  
VOX C1  O2  DOUB N N 27  
VOX C46 C26 SING N N 28  
VOX C46 C48 SING N N 29  
VOX C26 C27 SING N N 30  
VOX C27 O28 DOUB N N 31  
VOX C27 N29 SING N N 32  
VOX N29 C30 SING N N 33  
VOX C30 C45 SING N N 34  
VOX C30 C31 SING N N 35  
VOX C45 C43 SING N N 36  
VOX O44 C43 SING N N 37  
VOX O32 C31 DOUB N N 38  
VOX C31 N33 SING N N 39  
VOX C43 C42 SING N N 40  
VOX C42 C41 SING N N 41  
VOX N33 C34 SING N N 42  
VOX C41 N40 SING N N 43  
VOX N40 C38 SING N N 44  
VOX C34 C35 SING N N 45  
VOX C34 C36 SING N N 46  
VOX C37 C38 SING N N 47  
VOX C37 C36 SING N N 48  
VOX C38 O39 DOUB N N 49  
VOX C4  H1  SING N N 50  
VOX C4  H2  SING N N 51  
VOX C5  H3  SING N N 52  
VOX C5  H4  SING N N 53  
VOX C6  H5  SING N N 54  
VOX C6  H6  SING N N 55  
VOX C7  H7  SING N N 56  
VOX C7  H8  SING N N 57  
VOX C8  H9  SING N N 58  
VOX C8  H10 SING N N 59  
VOX C10 H11 SING N N 60  
VOX C13 H12 SING N N 61  
VOX C17 H13 SING N N 62  
VOX C20 H14 SING N N 63  
VOX C20 H15 SING N N 64  
VOX C20 H16 SING N N 65  
VOX C22 H17 SING N N 66  
VOX C24 H18 SING N N 67  
VOX C26 H19 SING N N 68  
VOX C36 H20 SING N N 69  
VOX C36 H21 SING N N 70  
VOX C34 H22 SING N N 71  
VOX C35 H23 SING N N 72  
VOX C35 H24 SING N N 73  
VOX C35 H25 SING N N 74  
VOX N33 H26 SING N N 75  
VOX C37 H27 SING N N 76  
VOX C37 H28 SING N N 77  
VOX N40 H29 SING N N 78  
VOX C41 H30 SING N N 79  
VOX C41 H31 SING N N 80  
VOX C42 H32 SING N N 81  
VOX C42 H33 SING N N 82  
VOX C43 H34 SING N N 83  
VOX O44 H35 SING N N 84  
VOX C45 H36 SING N N 85  
VOX C45 H37 SING N N 86  
VOX C30 H38 SING N N 87  
VOX N29 H39 SING N N 88  
VOX C46 H40 SING N N 89  
VOX C48 H41 SING N N 90  
VOX C48 H42 SING N N 91  
VOX C48 H43 SING N N 92  
VOX O47 H44 SING N N 93  
VOX N25 H45 SING N N 94  
VOX C3  H46 SING N N 95  
VOX C3  H47 SING N N 96  
VOX C11 H48 SING N N 97  
VOX N14 H49 SING N N 98  
VOX N15 H50 SING N N 99  
VOX C18 H51 SING N N 100 
VOX C23 H52 SING N N 101 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VOX InChI            InChI                1.06  "InChI=1S/C35H52N6O6/c1-23-10-15-27(16-11-23)40-41-28-17-13-26(14-18-28)8-6-4-5-7-9-32(45)39-33(25(3)42)35(47)38-30-22-29(43)20-21-36-31(44)19-12-24(2)37-34(30)46/h10-11,13-18,24-25,29-30,33,40-43H,4-9,12,19-22H2,1-3H3,(H,36,44)(H,37,46)(H,38,47)(H,39,45)/t24-,25+,29-,30-,33-/m0/s1" 
VOX InChIKey         InChI                1.06  RLZPHOGHHZBJIN-RPQORNJFSA-N                                                                                                                                                                                                                                                                 
VOX SMILES_CANONICAL CACTVS               3.385 "C[C@@H](O)[C@H](NC(=O)CCCCCCc1ccc(NNc2ccc(C)cc2)cc1)C(=O)N[C@H]3C[C@@H](O)CCNC(=O)CC[C@H](C)NC3=O"                                                                                                                                                                                         
VOX SMILES           CACTVS               3.385 "C[CH](O)[CH](NC(=O)CCCCCCc1ccc(NNc2ccc(C)cc2)cc1)C(=O)N[CH]3C[CH](O)CCNC(=O)CC[CH](C)NC3=O"                                                                                                                                                                                                
VOX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)NNc2ccc(cc2)CCCCCCC(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H]3C[C@H](CCNC(=O)CC[C@@H](NC3=O)C)O"                                                                                                                                                                                        
VOX SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)NNc2ccc(cc2)CCCCCCC(=O)NC(C(C)O)C(=O)NC3CC(CCNC(=O)CCC(NC3=O)C)O"                                                                                                                                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           VOX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-7-[4-[2-(4-methylphenyl)hydrazinyl]phenyl]heptanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VOX "Create component" 2023-03-22 PDBE 
VOX "Initial release"  2023-12-27 RCSB 
# 
