data_GJY
#

_chem_comp.id                                   GJY
_chem_comp.name                                 "methyl-9Z,12Z,15Z-octadecatrienylphosphonofluoridate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H34 F O2 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Methyl alpha-Linolenyl Fluorophosphonate (MLnFP)"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-05-24
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       344.444
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GJY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6DII
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GJY  O1   O1   O  0  1  N  N  N  28.904  18.677  -126.452   -7.427   0.085  -1.372  O1   GJY   1  
GJY  P1   P1   P  0  1  N  N  S  28.427  20.030  -127.059   -7.132  -0.733  -0.174  P1   GJY   2  
GJY  O2   O2   O  0  1  N  N  N  29.363  21.199  -126.540   -8.455  -0.848   0.735  O2   GJY   3  
GJY  CM   C1   C  0  1  N  N  N  30.677  20.951  -126.001   -9.675  -1.424   0.265  CM   GJY   4  
GJY  C1   C2   C  0  1  N  N  N  26.729  20.738  -127.220   -5.800   0.057   0.788  C1   GJY   5  
GJY  C2   C3   C  0  1  N  N  N  25.788  20.215  -126.136   -4.543   0.167  -0.077  C2   GJY   6  
GJY  C3   C4   C  0  1  N  N  N  24.777  21.258  -125.668   -3.425   0.830   0.730  C3   GJY   7  
GJY  C4   C5   C  0  1  N  N  N  25.186  21.939  -124.365   -2.167   0.940  -0.134  C4   GJY   8  
GJY  C5   C6   C  0  1  N  N  N  24.519  23.300  -124.176   -1.049   1.602   0.673  C5   GJY   9  
GJY  C6   C7   C  0  1  N  N  N  23.078  23.186  -123.684    0.208   1.712  -0.191  C6   GJY  10  
GJY  C7   C8   C  0  1  N  N  N  22.677  24.332  -122.758    1.326   2.375   0.616  C7   GJY  11  
GJY  C8   C9   C  0  1  N  N  N  21.191  24.665  -122.847    2.583   2.485  -0.249  C8   GJY  12  
GJY  C9   C10  C  0  1  N  N  N  20.890  26.141  -122.592    3.684   3.138   0.547  C9   GJY  13  
GJY  C10  C11  C  0  1  N  N  N  20.158  26.489  -121.555    4.857   2.561   0.637  C10  GJY  14  
GJY  C11  C12  C  0  1  N  N  N  19.621  25.417  -120.610    5.159   1.333  -0.182  C11  GJY  15  
GJY  C12  C13  C  0  1  N  N  N  18.486  24.594  -121.212    6.424   1.553  -0.970  C12  GJY  16  
GJY  C13  C14  C  0  1  N  N  N  17.545  24.106  -120.432    7.397   0.679  -0.905  C13  GJY  17  
GJY  C14  C15  C  0  1  N  N  N  17.599  24.372  -118.930    7.192  -0.623  -0.174  C14  GJY  18  
GJY  C15  C16  C  0  1  N  N  N  16.230  24.291  -118.257    7.543  -1.771  -1.084  C15  GJY  19  
GJY  C16  C17  C  0  1  N  N  N  15.353  25.265  -118.397    8.401  -2.681  -0.691  C16  GJY  20  
GJY  C17  C18  C  0  1  N  N  N  15.690  26.494  -119.240    8.901  -2.680   0.730  C17  GJY  21  
GJY  C18  C19  C  0  1  N  N  N  14.816  26.617  -120.489    8.685  -4.062   1.348  C18  GJY  22  
GJY  F1   F1   F  0  1  N  Y  N  29.026  19.767  -128.501   -6.647  -2.259  -0.648  F1   GJY  23  
GJY  H1   H1   H  0  1  N  N  N  31.139  21.905  -125.707  -10.034  -0.862  -0.597  H1   GJY  24  
GJY  H2   H2   H  0  1  N  N  N  30.595  20.297  -125.121   -9.500  -2.460  -0.024  H2   GJY  25  
GJY  H3   H3   H  0  1  N  N  N  31.300  20.462  -126.764  -10.423  -1.389   1.058  H3   GJY  26  
GJY  H4   H4   H  0  1  N  N  N  26.791  21.833  -127.139   -6.117   1.054   1.097  H4   GJY  27  
GJY  H5   H5   H  0  1  N  N  N  26.322  20.466  -128.205   -5.583  -0.545   1.670  H5   GJY  28  
GJY  H6   H6   H  0  1  N  N  N  25.239  19.350  -126.536   -4.226  -0.829  -0.386  H6   GJY  29  
GJY  H7   H7   H  0  1  N  N  N  26.391  19.899  -125.272   -4.760   0.769  -0.959  H7   GJY  30  
GJY  H8   H8   H  0  1  N  N  N  24.678  22.026  -126.449   -3.741   1.826   1.039  H8   GJY  31  
GJY  H9   H9   H  0  1  N  N  N  23.807  20.763  -125.516   -3.208   0.228   1.613  H9   GJY  32  
GJY  H10  H10  H  0  1  N  N  N  24.903  21.289  -123.524   -1.851  -0.057  -0.443  H10  GJY  33  
GJY  H11  H11  H  0  1  N  N  N  26.277  22.079  -124.369   -2.384   1.542  -1.016  H11  GJY  34  
GJY  H12  H12  H  0  1  N  N  N  25.098  23.877  -123.439   -1.366   2.599   0.982  H12  GJY  35  
GJY  H13  H13  H  0  1  N  N  N  24.521  23.830  -125.140   -0.832   1.000   1.556  H13  GJY  36  
GJY  H14  H14  H  0  1  N  N  N  22.408  23.188  -124.556    0.525   0.716  -0.500  H14  GJY  37  
GJY  H15  H15  H  0  1  N  N  N  22.967  22.238  -123.138   -0.009   2.314  -1.074  H15  GJY  38  
GJY  H16  H16  H  0  1  N  N  N  22.913  24.047  -121.722    1.009   3.371   0.925  H16  GJY  39  
GJY  H17  H17  H  0  1  N  N  N  23.256  25.226  -123.033    1.543   1.773   1.498  H17  GJY  40  
GJY  H18  H18  H  0  1  N  N  N  20.834  24.404  -123.854    2.900   1.489  -0.557  H18  GJY  41  
GJY  H19  H19  H  0  1  N  N  N  20.652  24.064  -122.100    2.366   3.087  -1.131  H19  GJY  42  
GJY  H20  H20  H  0  1  N  N  N  21.277  26.896  -123.260    3.507   4.081   1.042  H20  GJY  43  
GJY  H21  H21  H  0  1  N  N  N  19.938  27.531  -121.373    5.608   2.966   1.299  H21  GJY  44  
GJY  H22  H22  H  0  1  N  N  N  20.445  24.737  -120.350    5.287   0.477   0.480  H22  GJY  45  
GJY  H23  H23  H  0  1  N  N  N  19.250  25.909  -119.699    4.332   1.141  -0.867  H23  GJY  46  
GJY  H24  H24  H  0  1  N  N  N  18.455  24.412  -122.276    6.528   2.432  -1.590  H24  GJY  47  
GJY  H25  H25  H  0  1  N  N  N  16.740  23.521  -120.852    8.346   0.891  -1.374  H25  GJY  48  
GJY  H26  H26  H  0  1  N  N  N  18.262  23.627  -118.466    7.833  -0.650   0.708  H26  GJY  49  
GJY  H27  H27  H  0  1  N  N  N  18.010  25.379  -118.768    6.149  -0.708   0.132  H27  GJY  50  
GJY  H28  H28  H  0  1  N  N  N  15.978  23.427  -117.660    7.089  -1.844  -2.061  H28  GJY  51  
GJY  H29  H29  H  0  1  N  N  N  14.390  25.194  -117.913    8.748  -3.431  -1.385  H29  GJY  52  
GJY  H30  H30  H  0  1  N  N  N  16.742  26.427  -119.553    9.964  -2.439   0.741  H30  GJY  53  
GJY  H31  H31  H  0  1  N  N  N  15.548  27.393  -118.622    8.354  -1.934   1.308  H31  GJY  54  
GJY  H32  H32  H  0  1  N  N  N  15.105  27.517  -121.052    7.622  -4.303   1.338  H32  GJY  55  
GJY  H33  H33  H  0  1  N  N  N  14.954  25.728  -121.122    9.232  -4.808   0.771  H33  GJY  56  
GJY  H34  H34  H  0  1  N  N  N  13.760  26.694  -120.191    9.048  -4.062   2.376  H34  GJY  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GJY  C1   P1   SING  N  N   1  
GJY  C1   C2   SING  N  N   2  
GJY  P1   O2   SING  N  N   3  
GJY  P1   O1   DOUB  N  N   4  
GJY  O2   CM   SING  N  N   5  
GJY  C2   C3   SING  N  N   6  
GJY  C3   C4   SING  N  N   7  
GJY  C4   C5   SING  N  N   8  
GJY  C5   C6   SING  N  N   9  
GJY  C6   C7   SING  N  N  10  
GJY  C8   C7   SING  N  N  11  
GJY  C8   C9   SING  N  N  12  
GJY  C9   C10  DOUB  N  Z  13  
GJY  C10  C11  SING  N  N  14  
GJY  C12  C11  SING  N  N  15  
GJY  C12  C13  DOUB  N  Z  16  
GJY  C18  C17  SING  N  N  17  
GJY  C13  C14  SING  N  N  18  
GJY  C17  C16  SING  N  N  19  
GJY  C14  C15  SING  N  N  20  
GJY  C16  C15  DOUB  N  Z  21  
GJY  P1   F1   SING  N  N  22  
GJY  CM   H1   SING  N  N  23  
GJY  CM   H2   SING  N  N  24  
GJY  CM   H3   SING  N  N  25  
GJY  C1   H4   SING  N  N  26  
GJY  C1   H5   SING  N  N  27  
GJY  C2   H6   SING  N  N  28  
GJY  C2   H7   SING  N  N  29  
GJY  C3   H8   SING  N  N  30  
GJY  C3   H9   SING  N  N  31  
GJY  C4   H10  SING  N  N  32  
GJY  C4   H11  SING  N  N  33  
GJY  C5   H12  SING  N  N  34  
GJY  C5   H13  SING  N  N  35  
GJY  C6   H14  SING  N  N  36  
GJY  C6   H15  SING  N  N  37  
GJY  C7   H16  SING  N  N  38  
GJY  C7   H17  SING  N  N  39  
GJY  C8   H18  SING  N  N  40  
GJY  C8   H19  SING  N  N  41  
GJY  C9   H20  SING  N  N  42  
GJY  C10  H21  SING  N  N  43  
GJY  C11  H22  SING  N  N  44  
GJY  C11  H23  SING  N  N  45  
GJY  C12  H24  SING  N  N  46  
GJY  C13  H25  SING  N  N  47  
GJY  C14  H26  SING  N  N  48  
GJY  C14  H27  SING  N  N  49  
GJY  C15  H28  SING  N  N  50  
GJY  C16  H29  SING  N  N  51  
GJY  C17  H30  SING  N  N  52  
GJY  C17  H31  SING  N  N  53  
GJY  C18  H32  SING  N  N  54  
GJY  C18  H33  SING  N  N  55  
GJY  C18  H34  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GJY  SMILES            ACDLabs               12.01  "O=P(OC)(F)CCCCCCCC\C=C/C\C=C/C[C@H]=[C@H]CC"  
GJY  InChI             InChI                 1.03   "InChI=1S/C19H34FO2P/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-23(20,21)22-2/h4-5,7-8,10-11H,3,6,9,12-19H2,1-2H3/b5-4-,8-7-,11-10-/t23-/m0/s1"  
GJY  InChIKey          InChI                 1.03   MEHJVKGETWKOKY-SINQZMEQSA-N  
GJY  SMILES_CANONICAL  CACTVS                3.385  "CC\C=C/C/C=C\C\C=C/CCCCCCCC[P@](F)(=O)OC"  
GJY  SMILES            CACTVS                3.385  "CCC=CCC=CCC=CCCCCCCCC[P](F)(=O)OC"  
GJY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CC/C=C\C/C=C\C/C=C\CCCCCCCC[P@](=O)(OC)F"  
GJY  SMILES            "OpenEye OEToolkits"  2.0.6  "CCC=CCC=CCC=CCCCCCCCCP(=O)(OC)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GJY  "SYSTEMATIC NAME"  ACDLabs               12.01  "methyl (S)-(9Z,12Z,15Z)-octadeca-9,12,15-trien-1-ylphosphonofluoridate"  
GJY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{Z},6~{Z},9~{Z})-18-[fluoranyl(methoxy)phosphoryl]octadeca-3,6,9-triene"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GJY  "Create component"  2018-05-24  RCSB  
GJY  "Modify name"       2018-05-24  RCSB  
GJY  "Modify name"       2018-06-08  RCSB  
GJY  "Initial release"   2019-03-27  RCSB  
GJY  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     GJY
_pdbx_chem_comp_synonyms.name        "Methyl alpha-Linolenyl Fluorophosphonate (MLnFP)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
