data_NLY
# 
_chem_comp.id                                    NLY 
_chem_comp.name                                  "N-(4-aminobutyl)glycine" 
_chem_comp.type                                  "PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H14 N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               GLY 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-10-18 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        146.188 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NLY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4HGC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NLY N   N   N 0 1 N N N Y Y N 16.664 -3.676 12.292 -0.876 0.162  -0.009 N   NLY 1  
NLY CB  CB  C 0 1 N N N N N N 16.081 -3.815 10.960 0.384  -0.594 -0.011 CB  NLY 2  
NLY CG  CG  C 0 1 N N N N N N 17.291 -3.848 10.019 1.564  0.381  -0.015 CG  NLY 3  
NLY CD  CD  C 0 1 N N N N N N 17.065 -3.336 8.694  2.876  -0.406 -0.017 CD  NLY 4  
NLY CE  CE  C 0 1 N N N N N N 18.340 -3.495 7.857  4.055  0.569  -0.020 CE  NLY 5  
NLY NZ  NZ  N 0 1 N N N N N N 18.056 -3.078 6.511  5.315  -0.186 -0.023 NZ  NLY 6  
NLY CA  CA  C 0 1 N N N Y N N 16.983 -2.337 12.746 -2.032 -0.743 -0.006 CA  NLY 7  
NLY C   C2  C 0 1 N N N Y N Y 16.032 -1.812 13.795 -3.303 0.066  -0.003 C2  NLY 8  
NLY O   O   O 0 1 N N N Y N Y 15.462 -0.720 13.642 -3.251 1.273  -0.004 O   NLY 9  
NLY H   H1  H 0 1 N Y N Y Y N 16.016 -4.067 12.945 -0.913 0.800  0.772  H1  NLY 10 
NLY H3  H3  H 0 1 N N N N N N 15.430 -2.959 10.728 0.434  -1.220 0.879  H3  NLY 11 
NLY H4  H4  H 0 1 N N N N N N 15.502 -4.747 10.883 0.430  -1.222 -0.901 H4  NLY 12 
NLY H5  H5  H 0 1 N N N N N N 17.618 -4.894 9.926  1.514  1.008  -0.905 H5  NLY 13 
NLY H6  H6  H 0 1 N N N N N N 18.093 -3.252 10.479 1.518  1.010  0.875  H6  NLY 14 
NLY H7  H7  H 0 1 N N N N N N 16.797 -2.271 8.754  2.925  -1.033 0.873  H7  NLY 15 
NLY H8  H8  H 0 1 N N N N N N 16.244 -3.895 8.221  2.921  -1.034 -0.906 H8  NLY 16 
NLY H9  H9  H 0 1 N N N N N N 18.657 -4.548 7.860  4.006  1.196  -0.911 H9  NLY 17 
NLY H10 H10 H 0 1 N N N N N N 19.141 -2.870 8.278  4.010  1.197  0.869  H10 NLY 18 
NLY H11 H11 H 0 1 N N N N N N 18.879 -3.176 5.951  6.109  0.435  -0.025 H11 NLY 19 
NLY H12 H12 H 0 1 N N N N N N 17.326 -3.647 6.133  5.356  -0.823 0.759  H12 NLY 20 
NLY HA2 H14 H 0 1 N N N Y N N 17.998 -2.346 13.170 -2.004 -1.372 -0.895 H14 NLY 21 
NLY HA3 H15 H 0 1 N N N Y N N 16.954 -1.660 11.880 -2.000 -1.371 0.885  H15 NLY 22 
NLY OXT OXT O 0 1 N Y N Y N Y ?      ?      ?      -4.494 -0.554 -0.000 OXT NLY 23 
NLY HXT H2  H 0 1 N Y N Y N Y ?      ?      ?      -5.281 0.007  0.001  H2  NLY 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NLY NZ  CE  SING N N 1  
NLY CE  CD  SING N N 2  
NLY CD  CG  SING N N 3  
NLY CG  CB  SING N N 4  
NLY CB  N   SING N N 5  
NLY N   CA  SING N N 6  
NLY CA  C   SING N N 7  
NLY O   C   DOUB N N 8  
NLY N   H   SING N N 9  
NLY CB  H3  SING N N 10 
NLY CB  H4  SING N N 11 
NLY CG  H5  SING N N 12 
NLY CG  H6  SING N N 13 
NLY CD  H7  SING N N 14 
NLY CD  H8  SING N N 15 
NLY CE  H9  SING N N 16 
NLY CE  H10 SING N N 17 
NLY NZ  H11 SING N N 18 
NLY NZ  H12 SING N N 19 
NLY CA  HA2 SING N N 20 
NLY CA  HA3 SING N N 21 
NLY C   OXT SING N N 22 
NLY OXT HXT SING N N 23 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NLY SMILES           ACDLabs              12.01 "O=C(O)CNCCCCN"                                                 
NLY InChI            InChI                1.03  "InChI=1S/C6H14N2O2/c7-3-1-2-4-8-5-6(9)10/h8H,1-5,7H2,(H,9,10)" 
NLY InChIKey         InChI                1.03  OGAULEBSQQMUKP-UHFFFAOYSA-N                                     
NLY SMILES_CANONICAL CACTVS               3.370 "NCCCCNCC(O)=O"                                                 
NLY SMILES           CACTVS               3.370 "NCCCCNCC(O)=O"                                                 
NLY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C(CCNCC(=O)O)CN"                                               
NLY SMILES           "OpenEye OEToolkits" 1.7.6 "C(CCNCC(=O)O)CN"                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
NLY "SYSTEMATIC NAME" ACDLabs              12.01 "N-(4-aminobutyl)glycine"             
NLY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-(4-azanylbutylamino)ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NLY "Create component" 2012-10-18 RCSB 
NLY "Initial release"  2013-10-09 RCSB 
NLY "Modify backbone"  2023-11-03 PDBE 
# 
