data_5YZ
#

_chem_comp.id                                   5YZ
_chem_comp.name                                 "6-[(5-cyclopropyl-1~{H}-pyrazol-3-yl)amino]-2-[4-[(3-methyl-4-oxidanyl-phenyl)methyl]piperazin-1-yl]-~{N}-prop-2-ynyl-pyrimidine-4-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H30 N8 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-08-31
_chem_comp.pdbx_modified_date                   2022-06-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       486.569
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ?
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7FIC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5YZ  C1   C1   C  0  1  N  N  N  -36.996   9.800   -1.214  -5.011  -1.359  -0.569  C1   5YZ   1  
5YZ  C10  C2   C  0  1  N  N  N  -33.114   9.627   -5.962  -0.671  -1.933   1.236  C10  5YZ   2  
5YZ  C11  C3   C  0  1  Y  N  N  -31.162   7.505   -1.818  -1.955   3.985  -0.432  C11  5YZ   3  
5YZ  C12  C4   C  0  1  N  N  N  -33.655  12.467   -6.127   1.851  -0.644   0.816  C12  5YZ   4  
5YZ  C13  C5   C  0  1  N  N  N  -32.220  10.666   -6.630   0.617  -2.418   1.906  C13  5YZ   5  
5YZ  C14  C6   C  0  1  Y  N  N  -30.485   8.169   -2.837  -0.721   3.606   0.121  C14  5YZ   6  
5YZ  C15  C7   C  0  1  Y  N  N  -29.199   7.621   -2.731   0.088   4.689   0.111  C15  5YZ   7  
5YZ  C16  C8   C  0  1  N  N  N  -32.256  12.605   -8.079   3.014  -2.609   1.621  C16  5YZ   8  
5YZ  C17  C9   C  0  1  N  N  N  -28.125   8.111   -3.658   1.509   4.740   0.612  C17  5YZ   9  
5YZ  C18  C10  C  0  1  Y  N  N  -31.463  11.777   -9.066   4.124  -2.477   0.610  C18  5YZ  10  
5YZ  C19  C11  C  0  1  N  N  N  -28.617   8.391   -5.075   1.979   6.037   1.273  C19  5YZ  11  
5YZ  C2   C12  C  0  1  Y  N  N  -35.668   9.492   -1.915  -3.901  -0.408  -0.305  C2   5YZ  12  
5YZ  C20  C13  C  0  1  N  N  N  -27.935   7.068   -4.742   2.484   5.662  -0.122  C20  5YZ  13  
5YZ  C21  C14  C  0  1  Y  N  N  -30.072  11.718   -8.927   4.889  -1.325   0.571  C21  5YZ  14  
5YZ  C22  C15  C  0  1  Y  N  N  -32.103  11.098  -10.104   4.379  -3.509  -0.273  C22  5YZ  15  
5YZ  C23  C16  C  0  1  Y  N  N  -29.323  10.960   -9.813   5.906  -1.202  -0.355  C23  5YZ  16  
5YZ  C24  C17  C  0  1  Y  N  N  -31.337  10.346  -10.991   5.399  -3.393  -1.197  C24  5YZ  17  
5YZ  C25  C18  C  0  1  Y  N  N  -29.954  10.285  -10.842   6.161  -2.234  -1.246  C25  5YZ  18  
5YZ  C26  C19  C  0  1  N  N  N  -27.830  10.888   -9.663   6.739   0.054  -0.398  C26  5YZ  19  
5YZ  C3   C20  C  0  1  N  N  N  -38.239   9.895    0.967  -5.955  -3.605  -0.542  C3   5YZ  20  
5YZ  C4   C21  C  0  1  Y  N  N  -34.673   8.691   -1.325  -4.047   0.943  -0.597  C4   5YZ  21  
5YZ  C5   C22  C  0  1  N  N  N  -38.816  11.204    0.628  -5.544  -4.962  -0.147  C5   5YZ  22  
5YZ  C6   C23  C  0  1  Y  N  N  -34.257   9.799   -3.786  -1.762   0.002   0.463  C6   5YZ  23  
5YZ  C7   C24  C  0  1  Y  N  N  -33.462   8.477   -2.009  -2.973   1.799  -0.330  C7   5YZ  24  
5YZ  C8   C25  C  0  1  N  N  N  -39.372  12.335    0.384  -5.216  -6.044   0.169  C8   5YZ  25  
5YZ  C9   C26  C  0  1  N  N  N  -34.704  11.562   -5.488   0.563  -0.159   0.146  C9   5YZ  26  
5YZ  N1   N1   N  0  1  N  N  N  -37.102   9.649    0.054  -4.860  -2.667  -0.282  N1   5YZ  27  
5YZ  N2   N2   N  0  1  Y  N  N  -35.430  10.030   -3.137  -2.754  -0.838   0.220  N2   5YZ  28  
5YZ  N3   N3   N  0  1  Y  N  N  -33.294   9.030   -3.222  -1.859   1.295   0.189  N3   5YZ  29  
5YZ  N4   N4   N  0  1  N  N  N  -34.021  10.343   -5.069  -0.585  -0.485   1.004  N4   5YZ  30  
5YZ  N5   N5   N  0  1  N  N  N  -32.472   7.650   -1.442  -3.069   3.154  -0.604  N5   5YZ  31  
5YZ  N6   N6   N  0  1  Y  N  N  -30.403   6.631   -1.139  -1.883   5.254  -0.756  N6   5YZ  32  
5YZ  N7   N7   N  0  1  N  N  N  -33.056  11.713   -7.232   1.765  -2.092   1.048  N7   5YZ  33  
5YZ  N8   N8   N  0  1  Y  N  N  -29.128   6.724   -1.729  -0.602   5.717  -0.427  N8   5YZ  34  
5YZ  O1   O1   O  0  1  N  N  N  -37.935  10.236   -1.900  -6.057  -0.956  -1.038  O1   5YZ  35  
5YZ  O2   O2   O  0  1  N  N  N  -29.195   9.552  -11.696   7.165  -2.118  -2.154  O2   5YZ  36  
5YZ  H1   H1   H  0  1  N  N  N  -33.689   9.080   -6.724  -0.801  -2.447   0.284  H1   5YZ  37  
5YZ  H2   H2   H  0  1  N  N  N  -32.501   8.918   -5.386  -1.521  -2.148   1.884  H2   5YZ  38  
5YZ  H3   H3   H  0  1  N  N  N  -32.884  12.732   -5.389   2.701  -0.429   0.167  H3   5YZ  39  
5YZ  H4   H4   H  0  1  N  N  N  -34.128  13.384   -6.508   1.981  -0.130   1.768  H4   5YZ  40  
5YZ  H5   H5   H  0  1  N  N  N  -31.617  10.183   -7.413   0.733  -1.924   2.871  H5   5YZ  41  
5YZ  H6   H6   H  0  1  N  N  N  -31.554  11.115   -5.878   0.567  -3.496   2.053  H6   5YZ  42  
5YZ  H7   H7   H  0  1  N  N  N  -30.854   8.912   -3.528  -0.464   2.624   0.490  H7   5YZ  43  
5YZ  H8   H8   H  0  1  N  N  N  -31.567  13.188   -7.451   2.886  -3.659   1.885  H8   5YZ  44  
5YZ  H9   H9   H  0  1  N  N  N  -32.922  13.289   -8.625   3.267  -2.038   2.515  H9   5YZ  45  
5YZ  H10  H10  H  0  1  N  N  N  -27.257   8.658   -3.263   1.902   3.803   1.006  H10  5YZ  46  
5YZ  H11  H11  H  0  1  N  N  N  -28.102   9.135   -5.701   1.261   6.854   1.346  H11  5YZ  47  
5YZ  H12  H12  H  0  1  N  N  N  -29.696   8.416   -5.289   2.682   5.953   2.102  H12  5YZ  48  
5YZ  H13  H13  H  0  1  N  N  N  -28.522   6.138   -4.718   3.519   5.333  -0.211  H13  5YZ  49  
5YZ  H14  H14  H  0  1  N  N  N  -26.928   6.856   -5.130   2.098   6.233  -0.967  H14  5YZ  50  
5YZ  H15  H15  H  0  1  N  N  N  -29.584  12.261   -8.132   4.689  -0.521   1.264  H15  5YZ  51  
5YZ  H16  H16  H  0  1  N  N  N  -33.176  11.155  -10.217   3.781  -4.408  -0.240  H16  5YZ  52  
5YZ  H17  H17  H  0  1  N  N  N  -31.817   9.809  -11.796   5.596  -4.198  -1.890  H17  5YZ  53  
5YZ  H18  H18  H  0  1  N  N  N  -27.363  11.700  -10.241   7.599  -0.058   0.262  H18  5YZ  54  
5YZ  H19  H19  H  0  1  N  N  N  -27.563  10.993   -8.601   7.083   0.227  -1.417  H19  5YZ  55  
5YZ  H20  H20  H  0  1  N  N  N  -27.470   9.918  -10.037   6.136   0.900  -0.068  H20  5YZ  56  
5YZ  H21  H21  H  0  1  N  N  N  -38.997   9.108    0.840  -6.198  -3.594  -1.605  H21  5YZ  57  
5YZ  H22  H22  H  0  1  N  N  N  -37.887   9.900    2.009  -6.832  -3.308   0.034  H22  5YZ  58  
5YZ  H23  H23  H  0  1  N  N  N  -34.837   8.244   -0.356  -4.965   1.322  -1.019  H23  5YZ  59  
5YZ  H24  H24  H  0  1  N  N  N  -39.831  13.269    0.183  -4.923  -7.011   0.451  H24  5YZ  60  
5YZ  H25  H25  H  0  1  N  N  N  -35.153  12.061   -4.617   0.613   0.920  -0.001  H25  5YZ  61  
5YZ  H26  H26  H  0  1  N  N  N  -35.491  11.322   -6.219   0.447  -0.653  -0.819  H26  5YZ  62  
5YZ  H27  H27  H  0  1  N  N  N  -36.276   9.307    0.502  -4.027  -2.988   0.096  H27  5YZ  63  
5YZ  H28  H28  H  0  1  N  N  N  -32.764   7.096   -0.662  -3.909   3.527  -0.915  H28  5YZ  64  
5YZ  H31  H31  H  0  1  N  N  N  -28.281   9.623  -11.448   6.889  -1.735  -2.999  H31  5YZ  65  
5YZ  H29  H29  H  0  1  N  N  N  -28.313   6.214   -1.453  -0.270   6.619  -0.559  H29  5YZ  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5YZ  O2   C25  SING  N  N   1  
5YZ  C24  C25  DOUB  Y  N   2  
5YZ  C24  C22  SING  Y  N   3  
5YZ  C25  C23  SING  Y  N   4  
5YZ  C22  C18  DOUB  Y  N   5  
5YZ  C23  C26  SING  N  N   6  
5YZ  C23  C21  DOUB  Y  N   7  
5YZ  C18  C21  SING  Y  N   8  
5YZ  C18  C16  SING  N  N   9  
5YZ  C16  N7   SING  N  N  10  
5YZ  N7   C13  SING  N  N  11  
5YZ  N7   C12  SING  N  N  12  
5YZ  C13  C10  SING  N  N  13  
5YZ  C12  C9   SING  N  N  14  
5YZ  C10  N4   SING  N  N  15  
5YZ  C9   N4   SING  N  N  16  
5YZ  C19  C20  SING  N  N  17  
5YZ  C19  C17  SING  N  N  18  
5YZ  N4   C6   SING  N  N  19  
5YZ  C20  C17  SING  N  N  20  
5YZ  C6   N3   SING  Y  N  21  
5YZ  C6   N2   DOUB  Y  N  22  
5YZ  C17  C15  SING  N  N  23  
5YZ  N3   C7   DOUB  Y  N  24  
5YZ  N2   C2   SING  Y  N  25  
5YZ  C14  C15  DOUB  Y  N  26  
5YZ  C14  C11  SING  Y  N  27  
5YZ  C15  N8   SING  Y  N  28  
5YZ  C7   N5   SING  N  N  29  
5YZ  C7   C4   SING  Y  N  30  
5YZ  C2   C4   DOUB  Y  N  31  
5YZ  C2   C1   SING  N  N  32  
5YZ  O1   C1   DOUB  N  N  33  
5YZ  C11  N5   SING  N  N  34  
5YZ  C11  N6   DOUB  Y  N  35  
5YZ  N8   N6   SING  Y  N  36  
5YZ  C1   N1   SING  N  N  37  
5YZ  N1   C3   SING  N  N  38  
5YZ  C8   C5   TRIP  N  N  39  
5YZ  C5   C3   SING  N  N  40  
5YZ  C10  H1   SING  N  N  41  
5YZ  C10  H2   SING  N  N  42  
5YZ  C12  H3   SING  N  N  43  
5YZ  C12  H4   SING  N  N  44  
5YZ  C13  H5   SING  N  N  45  
5YZ  C13  H6   SING  N  N  46  
5YZ  C14  H7   SING  N  N  47  
5YZ  C16  H8   SING  N  N  48  
5YZ  C16  H9   SING  N  N  49  
5YZ  C17  H10  SING  N  N  50  
5YZ  C19  H11  SING  N  N  51  
5YZ  C19  H12  SING  N  N  52  
5YZ  C20  H13  SING  N  N  53  
5YZ  C20  H14  SING  N  N  54  
5YZ  C21  H15  SING  N  N  55  
5YZ  C22  H16  SING  N  N  56  
5YZ  C24  H17  SING  N  N  57  
5YZ  C26  H18  SING  N  N  58  
5YZ  C26  H19  SING  N  N  59  
5YZ  C26  H20  SING  N  N  60  
5YZ  C3   H21  SING  N  N  61  
5YZ  C3   H22  SING  N  N  62  
5YZ  C4   H23  SING  N  N  63  
5YZ  C8   H24  SING  N  N  64  
5YZ  C9   H25  SING  N  N  65  
5YZ  C9   H26  SING  N  N  66  
5YZ  N1   H27  SING  N  N  67  
5YZ  N5   H28  SING  N  N  68  
5YZ  O2   H31  SING  N  N  69  
5YZ  N8   H29  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5YZ  InChI             InChI                 1.03   "InChI=1S/C26H30N8O2/c1-3-8-27-25(36)21-15-23(29-24-14-20(31-32-24)19-5-6-19)30-26(28-21)34-11-9-33(10-12-34)16-18-4-7-22(35)17(2)13-18/h1,4,7,13-15,19,35H,5-6,8-12,16H2,2H3,(H,27,36)(H2,28,29,30,31,32)"  
5YZ  InChIKey          InChI                 1.03   VCHMYWXCLCHLBE-UHFFFAOYSA-N  
5YZ  SMILES_CANONICAL  CACTVS                3.385  "Cc1cc(CN2CCN(CC2)c3nc(Nc4cc([nH]n4)C5CC5)cc(n3)C(=O)NCC#C)ccc1O"  
5YZ  SMILES            CACTVS                3.385  "Cc1cc(CN2CCN(CC2)c3nc(Nc4cc([nH]n4)C5CC5)cc(n3)C(=O)NCC#C)ccc1O"  
5YZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1cc(ccc1O)CN2CCN(CC2)c3nc(cc(n3)Nc4cc([nH]n4)C5CC5)C(=O)NCC#C"  
5YZ  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1cc(ccc1O)CN2CCN(CC2)c3nc(cc(n3)Nc4cc([nH]n4)C5CC5)C(=O)NCC#C"  
#
_pdbx_chem_comp_identifier.comp_id          5YZ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "6-[(5-cyclopropyl-1~{H}-pyrazol-3-yl)amino]-2-[4-[(3-methyl-4-oxidanyl-phenyl)methyl]piperazin-1-yl]-~{N}-prop-2-ynyl-pyrimidine-4-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5YZ  "Create component"  2021-08-31  PDBJ  
5YZ  "Initial release"   2022-06-08  RCSB  
##
