HEADER DNA 03-MAY-93 122D TITLE DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR TITLE 2 D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3'); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS B-DNA, DOUBLE HELIX, MODIFIED, DNA EXPDTA X-RAY DIFFRACTION AUTHOR M.HAHN,U.HEINEMANN REVDAT 4 07-FEB-24 122D 1 LINK REVDAT 3 18-APR-18 122D 1 REMARK REVDAT 2 24-FEB-09 122D 1 VERSN REVDAT 1 15-OCT-93 122D 0 JRNL AUTH M.HAHN,U.HEINEMANN JRNL TITL DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF JRNL TITL 2 MODELS FOR D(CCAGGCM5CTGG) DERIVED FROM NUCLSQ, TNT AND JRNL TITL 3 X-PLOR. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 49 468 1993 JRNL REFN ISSN 0907-4449 JRNL PMID 15299506 JRNL DOI 10.1107/S0907444993004858 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH U.HEINEMANN,M.HAHN REMARK 1 TITL C-C-A-G-G-C-M5C-T-G-G: HELICAL FINE STRUCTURE, HYDRATION, REMARK 1 TITL 2 AND COMPARISON WITH C-C-A-G-G-C-C-T-G-G REMARK 1 REF J.BIOL.CHEM. V. 267 7332 1992 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH U.HEINEMANN,C.ALINGS,M.BANSAL REMARK 1 TITL DOUBLE HELIX CONFORMATION, GROOVE DIMENSIONS AND LIGAND REMARK 1 TITL 2 BINDING POTENTIAL OF A G/C-STRETCH IN B-DNA REMARK 1 REF EMBO J. V. 11 1931 1992 REMARK 1 REFN ISSN 0261-4189 REMARK 1 REFERENCE 3 REMARK 1 AUTH U.HEINEMANN,C.ALINGS REMARK 1 TITL THE CONFORMATION OF A B-DNA DECAMER IS MAINLY DETERMINED BY REMARK 1 TITL 2 ITS SEQUENCE AND NOT BY CRYSTAL ENVIRONMENT REMARK 1 REF EMBO J. V. 10 35 1991 REMARK 1 REFN ISSN 0261-4189 REMARK 1 REFERENCE 4 REMARK 1 AUTH U.HEINEMANN,C.ALINGS REMARK 1 TITL CRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNA REMARK 1 REF J.MOL.BIOL. V. 210 369 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 3799 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 406 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 37 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : NULL ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 122D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000170054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : DIFFRACTOMETER REMARK 200 DETECTOR MANUFACTURER : ENRAF-NONIUS CAD4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4704 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.50, MICRODIALYSIS, TEMPERATURE REMARK 280 277.00K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 57 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 56 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C5A 5CM B 17 O HOH B 39 1.24 REMARK 500 C5 5CM B 17 O HOH B 39 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC A 1 C2 DC A 1 N3 -0.061 REMARK 500 DC A 1 N3 DC A 1 C4 0.043 REMARK 500 DC A 2 C5' DC A 2 C4' 0.056 REMARK 500 DC A 2 O3' DC A 2 C3' -0.044 REMARK 500 DC A 2 N1 DC A 2 C6 -0.037 REMARK 500 DA A 3 C2 DA A 3 N3 -0.076 REMARK 500 DA A 3 N9 DA A 3 C4 -0.046 REMARK 500 DG A 4 C2' DG A 4 C1' -0.072 REMARK 500 DG A 4 N7 DG A 4 C8 0.078 REMARK 500 DG A 5 N1 DG A 5 C2 -0.054 REMARK 500 DG A 5 N3 DG A 5 C4 0.051 REMARK 500 DG A 5 C4 DG A 5 C5 -0.043 REMARK 500 DC A 6 C2 DC A 6 O2 -0.073 REMARK 500 DT A 8 C3' DT A 8 C2' 0.077 REMARK 500 DT A 8 C5 DT A 8 C6 -0.044 REMARK 500 DT A 8 C5 DT A 8 C7 0.046 REMARK 500 DG A 9 N1 DG A 9 C2 -0.067 REMARK 500 DG A 9 C6 DG A 9 N1 -0.078 REMARK 500 DG A 10 N7 DG A 10 C8 0.057 REMARK 500 DC B 11 C4' DC B 11 C3' -0.063 REMARK 500 DC B 11 O3' DC B 11 C3' -0.046 REMARK 500 DC B 11 C2 DC B 11 O2 -0.063 REMARK 500 DC B 12 O3' DC B 12 C3' -0.050 REMARK 500 DC B 12 C4 DC B 12 C5 -0.104 REMARK 500 DA B 13 C5 DA B 13 N7 -0.050 REMARK 500 DA B 13 N7 DA B 13 C8 0.048 REMARK 500 DG B 14 P DG B 14 O5' 0.069 REMARK 500 DG B 14 C4' DG B 14 C3' 0.085 REMARK 500 DG B 14 C2 DG B 14 N3 -0.064 REMARK 500 DG B 14 N3 DG B 14 C4 -0.052 REMARK 500 DG B 14 C5 DG B 14 N7 -0.051 REMARK 500 DG B 14 N7 DG B 14 C8 -0.037 REMARK 500 DG B 14 N9 DG B 14 C4 -0.074 REMARK 500 DG B 14 C2 DG B 14 N2 -0.079 REMARK 500 DG B 15 O4' DG B 15 C4' 0.063 REMARK 500 DG B 15 C6 DG B 15 O6 -0.065 REMARK 500 DC B 16 O3' DC B 16 C3' -0.062 REMARK 500 DT B 18 O3' DT B 18 C3' -0.041 REMARK 500 DG B 19 N3 DG B 19 C4 -0.043 REMARK 500 DG B 20 C5 DG B 20 N7 -0.058 REMARK 500 DG B 20 C8 DG B 20 N9 -0.060 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 1 O4' - C4' - C3' ANGL. DEV. = -5.4 DEGREES REMARK 500 DC A 1 C4' - C3' - C2' ANGL. DEV. = -7.7 DEGREES REMARK 500 DC A 1 O4' - C1' - N1 ANGL. DEV. = -6.2 DEGREES REMARK 500 DC A 1 N3 - C4 - C5 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC A 1 N3 - C2 - O2 ANGL. DEV. = -5.1 DEGREES REMARK 500 DC A 1 C6 - N1 - C1' ANGL. DEV. = 7.8 DEGREES REMARK 500 DC A 1 C2 - N1 - C1' ANGL. DEV. = -10.4 DEGREES REMARK 500 DC A 1 C3' - O3' - P ANGL. DEV. = 14.6 DEGREES REMARK 500 DC A 2 C4' - C3' - C2' ANGL. DEV. = -4.4 DEGREES REMARK 500 DC A 2 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 DC A 2 C2 - N3 - C4 ANGL. DEV. = -4.8 DEGREES REMARK 500 DC A 2 N3 - C4 - C5 ANGL. DEV. = 4.5 DEGREES REMARK 500 DC A 2 C5 - C6 - N1 ANGL. DEV. = -3.4 DEGREES REMARK 500 DC A 2 N1 - C2 - O2 ANGL. DEV. = -3.8 DEGREES REMARK 500 DA A 3 O3' - P - OP2 ANGL. DEV. = 13.1 DEGREES REMARK 500 DA A 3 O4' - C4' - C3' ANGL. DEV. = -3.1 DEGREES REMARK 500 DA A 3 C1' - O4' - C4' ANGL. DEV. = 4.6 DEGREES REMARK 500 DA A 3 C6 - N1 - C2 ANGL. DEV. = -4.2 DEGREES REMARK 500 DA A 3 C2 - N3 - C4 ANGL. DEV. = 3.2 DEGREES REMARK 500 DA A 3 N3 - C4 - C5 ANGL. DEV. = -4.8 DEGREES REMARK 500 DA A 3 C4 - C5 - N7 ANGL. DEV. = -4.1 DEGREES REMARK 500 DA A 3 N9 - C4 - C5 ANGL. DEV. = 3.9 DEGREES REMARK 500 DA A 3 N1 - C6 - N6 ANGL. DEV. = -8.4 DEGREES REMARK 500 DA A 3 C5 - C6 - N6 ANGL. DEV. = 5.8 DEGREES REMARK 500 DG A 4 O3' - P - OP2 ANGL. DEV. = 8.7 DEGREES REMARK 500 DG A 4 O5' - P - OP2 ANGL. DEV. = -8.6 DEGREES REMARK 500 DG A 4 O5' - C5' - C4' ANGL. DEV. = -5.8 DEGREES REMARK 500 DG A 4 C1' - O4' - C4' ANGL. DEV. = -7.7 DEGREES REMARK 500 DG A 4 O4' - C1' - C2' ANGL. DEV. = -5.3 DEGREES REMARK 500 DG A 4 O4' - C1' - N9 ANGL. DEV. = -7.0 DEGREES REMARK 500 DG A 4 N1 - C2 - N3 ANGL. DEV. = 4.3 DEGREES REMARK 500 DG A 4 C5 - N7 - C8 ANGL. DEV. = 5.8 DEGREES REMARK 500 DG A 4 N7 - C8 - N9 ANGL. DEV. = -10.0 DEGREES REMARK 500 DG A 4 C8 - N9 - C4 ANGL. DEV. = 8.4 DEGREES REMARK 500 DG A 4 C4 - N9 - C1' ANGL. DEV. = -10.2 DEGREES REMARK 500 DG A 4 C3' - O3' - P ANGL. DEV. = 13.7 DEGREES REMARK 500 DG A 5 P - O5' - C5' ANGL. DEV. = -10.1 DEGREES REMARK 500 DG A 5 O4' - C4' - C3' ANGL. DEV. = -4.7 DEGREES REMARK 500 DG A 5 C1' - O4' - C4' ANGL. DEV. = 4.5 DEGREES REMARK 500 DG A 5 C4' - C3' - C2' ANGL. DEV. = 5.8 DEGREES REMARK 500 DG A 5 O4' - C1' - N9 ANGL. DEV. = -5.6 DEGREES REMARK 500 DG A 5 C6 - N1 - C2 ANGL. DEV. = -6.7 DEGREES REMARK 500 DG A 5 C2 - N3 - C4 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG A 5 N3 - C4 - C5 ANGL. DEV. = -6.6 DEGREES REMARK 500 DG A 5 C5 - C6 - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 DG A 5 N3 - C4 - N9 ANGL. DEV. = 5.2 DEGREES REMARK 500 DG A 5 C5 - C6 - O6 ANGL. DEV. = -7.2 DEGREES REMARK 500 DC A 6 O4' - C1' - C2' ANGL. DEV. = -8.4 DEGREES REMARK 500 DC A 6 O4' - C1' - N1 ANGL. DEV. = -5.6 DEGREES REMARK 500 DC A 6 N1 - C2 - N3 ANGL. DEV. = 4.6 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 137 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC A 1 0.09 SIDE CHAIN REMARK 500 DG A 5 0.07 SIDE CHAIN REMARK 500 DT A 8 0.08 SIDE CHAIN REMARK 500 DG B 19 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 122D A 1 10 PDB 122D 122D 1 10 DBREF 122D B 11 20 PDB 122D 122D 11 20 SEQRES 1 A 10 DC DC DA DG DG DC 5CM DT DG DG SEQRES 1 B 10 DC DC DA DG DG DC 5CM DT DG DG MODRES 122D 5CM A 7 DC MODRES 122D 5CM B 17 DC HET 5CM A 7 20 HET 5CM B 17 20 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE FORMUL 1 5CM 2(C10 H16 N3 O7 P) FORMUL 3 HOH *37(H2 O) LINK O3' DC A 6 P 5CM A 7 1555 1555 1.64 LINK O3' 5CM A 7 P DT A 8 1555 1555 1.63 LINK O3' DC B 16 P 5CM B 17 1555 1555 1.63 LINK O3' 5CM B 17 P DT B 18 1555 1555 1.61 CRYST1 53.770 53.770 34.350 90.00 90.00 120.00 P 6 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018598 0.010737 0.000000 0.00000 SCALE2 0.000000 0.021475 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029112 0.00000 ATOM 1 O5' DC A 1 16.319 0.419 21.469 1.00 53.13 O ATOM 2 C5' DC A 1 15.513 -0.605 20.713 1.00 52.24 C ATOM 3 C4' DC A 1 14.357 -0.093 19.854 1.00 48.78 C ATOM 4 O4' DC A 1 14.787 1.211 19.373 1.00 45.12 O ATOM 5 C3' DC A 1 14.168 -0.792 18.515 1.00 48.21 C ATOM 6 O3' DC A 1 12.932 -0.326 17.828 1.00 50.18 O ATOM 7 C2' DC A 1 15.540 -0.373 17.965 1.00 43.95 C ATOM 8 C1' DC A 1 15.486 1.118 18.171 1.00 41.00 C ATOM 9 N1 DC A 1 16.696 1.816 18.480 1.00 29.72 N ATOM 10 C2 DC A 1 16.400 3.166 18.618 1.00 25.85 C ATOM 11 O2 DC A 1 15.244 3.586 18.686 1.00 23.10 O ATOM 12 N3 DC A 1 17.341 4.051 18.583 1.00 28.33 N ATOM 13 C4 DC A 1 18.631 3.586 18.446 1.00 28.30 C ATOM 14 N4 DC A 1 19.545 4.517 18.446 1.00 28.76 N ATOM 15 C5 DC A 1 18.981 2.235 18.343 1.00 27.28 C ATOM 16 C6 DC A 1 17.959 1.397 18.343 1.00 28.30 C ATOM 17 P DC A 2 11.749 -1.071 16.969 1.00 54.07 P ATOM 18 OP1 DC A 2 10.700 -1.770 17.828 1.00 55.34 O ATOM 19 OP2 DC A 2 12.475 -1.863 15.904 1.00 55.59 O ATOM 20 O5' DC A 2 10.888 0.140 16.316 1.00 50.95 O ATOM 21 C5' DC A 2 11.130 1.490 16.866 1.00 44.56 C ATOM 22 C4' DC A 2 10.996 2.747 15.938 1.00 37.26 C ATOM 23 O4' DC A 2 12.206 3.539 15.938 1.00 33.87 O ATOM 24 C3' DC A 2 10.727 2.375 14.530 1.00 33.86 C ATOM 25 O3' DC A 2 10.082 3.399 13.877 1.00 31.21 O ATOM 26 C2' DC A 2 12.179 2.189 14.083 1.00 33.20 C ATOM 27 C1' DC A 2 12.797 3.446 14.702 1.00 31.75 C ATOM 28 N1 DC A 2 14.195 3.353 14.770 1.00 23.01 N ATOM 29 C2 DC A 2 14.814 4.610 14.908 1.00 25.37 C ATOM 30 O2 DC A 2 14.061 5.541 15.011 1.00 30.29 O ATOM 31 N3 DC A 2 16.158 4.703 15.011 1.00 22.37 N ATOM 32 C4 DC A 2 16.803 3.586 14.839 1.00 21.77 C ATOM 33 N4 DC A 2 18.120 3.632 14.908 1.00 23.41 N ATOM 34 C5 DC A 2 16.239 2.328 14.633 1.00 22.94 C ATOM 35 C6 DC A 2 14.894 2.235 14.599 1.00 22.19 C ATOM 36 P DA A 3 8.684 3.306 13.122 1.00 35.33 P ATOM 37 OP1 DA A 3 7.608 3.120 14.118 1.00 41.53 O ATOM 38 OP2 DA A 3 8.496 2.608 11.782 1.00 33.89 O ATOM 39 O5' DA A 3 8.576 4.889 12.709 1.00 33.99 O ATOM 40 C5' DA A 3 8.576 5.914 13.671 1.00 32.42 C ATOM 41 C4' DA A 3 9.033 7.264 13.156 1.00 27.83 C ATOM 42 O4' DA A 3 10.458 7.311 12.950 1.00 28.52 O ATOM 43 C3' DA A 3 8.523 7.590 11.782 1.00 26.01 C ATOM 44 O3' DA A 3 8.415 8.987 11.816 1.00 26.58 O ATOM 45 C2' DA A 3 9.544 7.031 10.855 1.00 26.00 C ATOM 46 C1' DA A 3 10.862 7.264 11.610 1.00 26.08 C ATOM 47 N9 DA A 3 11.910 6.193 11.473 1.00 23.36 N ATOM 48 C8 DA A 3 11.695 4.889 11.267 1.00 27.68 C ATOM 49 N7 DA A 3 12.824 4.144 11.267 1.00 27.00 N ATOM 50 C5 DA A 3 13.846 5.076 11.473 1.00 21.99 C ATOM 51 C6 DA A 3 15.217 5.029 11.576 1.00 17.40 C ATOM 52 N6 DA A 3 16.023 4.005 11.473 1.00 17.33 N ATOM 53 N1 DA A 3 15.916 6.147 11.782 1.00 13.73 N ATOM 54 C2 DA A 3 15.163 7.264 11.885 1.00 17.44 C ATOM 55 N3 DA A 3 13.926 7.451 11.782 1.00 18.35 N ATOM 56 C4 DA A 3 13.227 6.333 11.576 1.00 21.29 C ATOM 57 P DG A 4 7.474 9.779 10.820 1.00 27.82 P ATOM 58 OP1 DG A 4 7.044 10.896 11.679 1.00 31.85 O ATOM 59 OP2 DG A 4 6.667 9.034 9.858 1.00 28.40 O ATOM 60 O5' DG A 4 8.684 10.198 9.790 1.00 25.81 O ATOM 61 C5' DG A 4 9.705 11.036 10.236 1.00 24.51 C ATOM 62 C4' DG A 4 10.700 10.990 9.137 1.00 23.94 C ATOM 63 O4' DG A 4 11.211 9.639 9.137 1.00 22.71 O ATOM 64 C3' DG A 4 10.216 11.176 7.694 1.00 22.25 C ATOM 65 O3' DG A 4 11.023 12.107 7.007 1.00 23.16 O ATOM 66 C2' DG A 4 10.673 9.825 7.042 1.00 20.68 C ATOM 67 C1' DG A 4 11.803 9.546 7.900 1.00 20.77 C ATOM 68 N9 DG A 4 12.071 8.149 7.832 1.00 13.68 N ATOM 69 C8 DG A 4 11.211 7.125 7.591 1.00 10.05 C ATOM 70 N7 DG A 4 12.018 6.007 7.694 1.00 16.28 N ATOM 71 C5 DG A 4 13.308 6.380 7.935 1.00 14.18 C ATOM 72 C6 DG A 4 14.545 5.635 8.141 1.00 20.03 C ATOM 73 O6 DG A 4 14.706 4.424 8.141 1.00 14.24 O ATOM 74 N1 DG A 4 15.593 6.519 8.450 1.00 20.79 N ATOM 75 C2 DG A 4 15.459 7.870 8.450 1.00 13.62 C ATOM 76 N2 DG A 4 16.534 8.522 8.725 1.00 16.50 N ATOM 77 N3 DG A 4 14.410 8.568 8.175 1.00 12.41 N ATOM 78 C4 DG A 4 13.362 7.777 8.004 1.00 13.78 C ATOM 79 P DG A 5 10.700 13.318 6.011 1.00 19.23 P ATOM 80 OP1 DG A 5 10.351 14.296 7.076 1.00 16.98 O ATOM 81 OP2 DG A 5 9.732 12.852 5.015 1.00 14.99 O ATOM 82 O5' DG A 5 12.071 13.737 5.324 1.00 17.78 O ATOM 83 C5' DG A 5 13.066 14.063 6.320 1.00 15.34 C ATOM 84 C4' DG A 5 14.383 13.551 5.805 1.00 14.76 C ATOM 85 O4' DG A 5 14.357 12.107 5.874 1.00 18.61 O ATOM 86 C3' DG A 5 14.652 13.737 4.294 1.00 14.63 C ATOM 87 O3' DG A 5 16.050 14.203 4.397 1.00 14.93 O ATOM 88 C2' DG A 5 14.652 12.340 3.607 1.00 15.90 C ATOM 89 C1' DG A 5 15.002 11.455 4.809 1.00 18.53 C ATOM 90 N9 DG A 5 14.437 10.105 4.878 1.00 22.99 N ATOM 91 C8 DG A 5 13.174 9.593 4.843 1.00 26.15 C ATOM 92 N7 DG A 5 13.174 8.289 4.740 1.00 26.67 N ATOM 93 C5 DG A 5 14.518 7.916 4.843 1.00 18.88 C ATOM 94 C6 DG A 5 15.082 6.659 4.706 1.00 11.13 C ATOM 95 O6 DG A 5 14.410 5.681 4.672 1.00 15.47 O ATOM 96 N1 DG A 5 16.481 6.566 4.878 1.00 12.76 N ATOM 97 C2 DG A 5 17.180 7.683 4.946 1.00 15.47 C ATOM 98 N2 DG A 5 18.551 7.451 5.084 1.00 20.15 N ATOM 99 N3 DG A 5 16.696 8.894 5.015 1.00 15.74 N ATOM 100 C4 DG A 5 15.298 8.987 5.015 1.00 18.77 C ATOM 101 P DC A 6 16.803 14.575 3.092 1.00 16.09 P ATOM 102 OP1 DC A 6 17.502 15.879 3.401 1.00 19.04 O ATOM 103 OP2 DC A 6 15.808 14.436 2.027 1.00 13.50 O ATOM 104 O5' DC A 6 17.852 13.318 2.885 1.00 16.75 O ATOM 105 C5' DC A 6 18.873 13.039 3.744 1.00 18.75 C ATOM 106 C4' DC A 6 19.545 11.874 3.160 1.00 21.10 C ATOM 107 O4' DC A 6 18.685 10.757 3.195 1.00 24.48 O ATOM 108 C3' DC A 6 19.922 12.061 1.683 1.00 22.08 C ATOM 109 O3' DC A 6 21.293 11.735 1.821 1.00 24.37 O ATOM 110 C2' DC A 6 19.088 10.990 1.030 1.00 24.52 C ATOM 111 C1' DC A 6 19.061 9.919 2.095 1.00 22.73 C ATOM 112 N1 DC A 6 17.825 9.080 1.889 1.00 18.95 N ATOM 113 C2 DC A 6 17.852 7.637 1.786 1.00 15.93 C ATOM 114 O2 DC A 6 18.900 7.125 1.821 1.00 14.85 O ATOM 115 N3 DC A 6 16.776 6.892 1.546 1.00 11.50 N ATOM 116 C4 DC A 6 15.674 7.590 1.477 1.00 13.99 C ATOM 117 N4 DC A 6 14.572 6.892 1.271 1.00 14.16 N ATOM 118 C5 DC A 6 15.540 9.034 1.546 1.00 14.63 C ATOM 119 C6 DC A 6 16.669 9.779 1.752 1.00 17.00 C HETATM 120 N1 5CM A 7 19.949 7.357 -1.924 1.00 16.86 N HETATM 121 C2 5CM A 7 19.250 6.147 -1.924 1.00 13.82 C HETATM 122 N3 5CM A 7 17.879 6.100 -1.992 1.00 11.29 N HETATM 123 C4 5CM A 7 17.314 7.264 -2.027 1.00 15.42 C HETATM 124 C5 5CM A 7 18.040 8.522 -1.992 1.00 15.90 C HETATM 125 C5A 5CM A 7 17.314 9.779 -2.027 1.00 12.72 C HETATM 126 C6 5CM A 7 19.357 8.568 -1.958 1.00 18.31 C HETATM 127 O2 5CM A 7 19.814 5.076 -2.027 1.00 13.69 O HETATM 128 N4 5CM A 7 15.943 7.218 -2.027 1.00 16.92 N HETATM 129 C1' 5CM A 7 21.427 7.311 -1.683 1.00 21.29 C HETATM 130 C2' 5CM A 7 22.341 7.963 -2.679 1.00 21.22 C HETATM 131 C3' 5CM A 7 23.444 8.382 -1.683 1.00 20.85 C HETATM 132 C4' 5CM A 7 22.933 8.149 -0.275 1.00 20.37 C HETATM 133 O4' 5CM A 7 21.535 8.056 -0.515 1.00 19.72 O HETATM 134 O3' 5CM A 7 24.546 7.497 -1.786 1.00 25.81 O HETATM 135 C5' 5CM A 7 22.906 9.313 0.721 1.00 25.77 C HETATM 136 O5' 5CM A 7 22.422 10.524 -0.069 1.00 27.82 O HETATM 137 P 5CM A 7 22.341 11.968 0.584 1.00 26.38 P HETATM 138 OP1 5CM A 7 23.605 12.387 1.202 1.00 27.22 O HETATM 139 OP2 5CM A 7 21.642 12.713 -0.447 1.00 21.56 O ATOM 140 P DT A 8 25.568 7.404 -3.057 1.00 34.47 P ATOM 141 OP1 DT A 8 26.804 7.031 -2.405 1.00 38.58 O ATOM 142 OP2 DT A 8 25.460 8.615 -3.882 1.00 39.16 O ATOM 143 O5' DT A 8 24.922 6.380 -4.088 1.00 30.35 O ATOM 144 C5' DT A 8 24.788 5.029 -3.572 1.00 29.08 C ATOM 145 C4' DT A 8 24.196 4.191 -4.637 1.00 27.29 C ATOM 146 O4' DT A 8 22.745 4.377 -4.637 1.00 25.86 O ATOM 147 C3' DT A 8 24.707 4.610 -5.943 1.00 28.50 C ATOM 148 O3' DT A 8 24.707 3.492 -6.904 1.00 34.28 O ATOM 149 C2' DT A 8 23.524 5.635 -6.252 1.00 25.02 C ATOM 150 C1' DT A 8 22.368 4.750 -5.908 1.00 25.63 C ATOM 151 N1 DT A 8 21.105 5.541 -5.943 1.00 25.55 N ATOM 152 C2 DT A 8 20.002 4.750 -5.771 1.00 24.56 C ATOM 153 O2 DT A 8 20.056 3.539 -5.874 1.00 21.62 O ATOM 154 N3 DT A 8 18.793 5.448 -5.565 1.00 20.31 N ATOM 155 C4 DT A 8 18.685 6.845 -5.427 1.00 21.04 C ATOM 156 O4 DT A 8 17.610 7.404 -5.221 1.00 19.09 O ATOM 157 C5 DT A 8 19.949 7.544 -5.565 1.00 17.90 C ATOM 158 C7 DT A 8 19.922 9.080 -5.427 1.00 15.41 C ATOM 159 C6 DT A 8 21.024 6.892 -5.874 1.00 16.47 C ATOM 160 P DG A 9 25.944 2.654 -7.523 1.00 35.82 P ATOM 161 OP1 DG A 9 26.670 2.235 -6.286 1.00 35.47 O ATOM 162 OP2 DG A 9 26.374 3.399 -8.725 1.00 35.75 O ATOM 163 O5' DG A 9 25.137 1.350 -8.072 1.00 29.04 O ATOM 164 C5' DG A 9 24.896 0.373 -7.248 1.00 30.23 C ATOM 165 C4' DG A 9 23.766 -0.373 -7.797 1.00 36.96 C ATOM 166 O4' DG A 9 22.583 0.466 -7.969 1.00 39.22 O ATOM 167 C3' DG A 9 24.008 -0.792 -9.240 1.00 42.25 C ATOM 168 O3' DG A 9 23.175 -1.956 -9.446 1.00 46.15 O ATOM 169 C2' DG A 9 23.524 0.419 -10.099 1.00 40.51 C ATOM 170 C1' DG A 9 22.288 0.698 -9.343 1.00 38.99 C ATOM 171 N9 DG A 9 21.804 2.095 -9.446 1.00 33.49 N ATOM 172 C8 DG A 9 22.610 3.213 -9.584 1.00 32.55 C ATOM 173 N7 DG A 9 21.911 4.331 -9.549 1.00 26.27 N ATOM 174 C5 DG A 9 20.621 3.958 -9.171 1.00 23.00 C ATOM 175 C6 DG A 9 19.519 4.750 -9.000 1.00 23.22 C ATOM 176 O6 DG A 9 19.357 5.960 -9.000 1.00 30.40 O ATOM 177 N1 DG A 9 18.443 4.005 -8.897 1.00 22.05 N ATOM 178 C2 DG A 9 18.389 2.701 -8.862 1.00 23.60 C ATOM 179 N2 DG A 9 17.126 2.282 -8.622 1.00 25.63 N ATOM 180 N3 DG A 9 19.438 1.909 -9.000 1.00 24.89 N ATOM 181 C4 DG A 9 20.540 2.608 -9.171 1.00 25.33 C ATOM 182 P DG A 10 23.632 -2.654 -10.820 1.00 48.74 P ATOM 183 OP1 DG A 10 23.282 -4.098 -10.648 1.00 50.06 O ATOM 184 OP2 DG A 10 25.003 -2.235 -11.061 1.00 48.75 O ATOM 185 O5' DG A 10 22.772 -1.909 -11.919 1.00 49.13 O ATOM 186 C5' DG A 10 21.965 -2.841 -12.503 1.00 49.71 C ATOM 187 C4' DG A 10 20.540 -2.515 -12.297 1.00 51.62 C ATOM 188 O4' DG A 10 20.218 -1.118 -11.885 1.00 51.39 O ATOM 189 C3' DG A 10 19.787 -2.608 -13.603 1.00 51.90 C ATOM 190 O3' DG A 10 18.470 -2.841 -13.053 1.00 52.80 O ATOM 191 C2' DG A 10 19.976 -1.164 -14.187 1.00 50.14 C ATOM 192 C1' DG A 10 19.599 -0.419 -12.950 1.00 49.96 C ATOM 193 N9 DG A 10 19.895 1.024 -12.881 1.00 42.50 N ATOM 194 C8 DG A 10 21.185 1.490 -12.950 1.00 38.28 C ATOM 195 N7 DG A 10 21.320 2.841 -12.847 1.00 38.59 N ATOM 196 C5 DG A 10 20.002 3.260 -12.709 1.00 38.40 C ATOM 197 C6 DG A 10 19.519 4.563 -12.503 1.00 36.61 C ATOM 198 O6 DG A 10 20.137 5.635 -12.538 1.00 41.12 O ATOM 199 N1 DG A 10 18.120 4.563 -12.400 1.00 32.15 N ATOM 200 C2 DG A 10 17.368 3.446 -12.366 1.00 33.64 C ATOM 201 N2 DG A 10 16.077 3.725 -12.229 1.00 36.14 N ATOM 202 N3 DG A 10 17.771 2.189 -12.538 1.00 36.04 N ATOM 203 C4 DG A 10 19.115 2.189 -12.709 1.00 39.49 C TER 204 DG A 10 ATOM 205 O5' DC B 11 11.319 11.688 -12.194 1.00 57.02 O ATOM 206 C5' DC B 11 10.996 10.571 -13.156 1.00 52.70 C ATOM 207 C4' DC B 11 11.426 9.174 -12.744 1.00 46.64 C ATOM 208 O4' DC B 11 12.717 8.708 -13.087 1.00 44.90 O ATOM 209 C3' DC B 11 11.238 8.848 -11.335 1.00 43.66 C ATOM 210 O3' DC B 11 10.404 7.777 -11.542 1.00 45.34 O ATOM 211 C2' DC B 11 12.582 8.382 -10.855 1.00 39.23 C ATOM 212 C1' DC B 11 13.227 7.823 -12.091 1.00 38.81 C ATOM 213 N1 DC B 11 14.599 8.242 -11.988 1.00 32.21 N ATOM 214 C2 DC B 11 15.190 7.031 -12.160 1.00 31.56 C ATOM 215 O2 DC B 11 14.491 6.100 -12.332 1.00 31.01 O ATOM 216 N3 DC B 11 16.561 6.892 -12.160 1.00 33.02 N ATOM 217 C4 DC B 11 17.260 8.009 -11.919 1.00 31.81 C ATOM 218 N4 DC B 11 18.578 7.870 -11.919 1.00 34.33 N ATOM 219 C5 DC B 11 16.669 9.313 -11.679 1.00 31.30 C ATOM 220 C6 DC B 11 15.351 9.360 -11.748 1.00 33.75 C ATOM 221 P DC B 12 9.222 7.777 -10.545 1.00 45.98 P ATOM 222 OP1 DC B 12 8.334 7.357 -11.679 1.00 46.66 O ATOM 223 OP2 DC B 12 9.410 9.034 -9.755 1.00 44.84 O ATOM 224 O5' DC B 12 9.625 6.519 -9.584 1.00 43.87 O ATOM 225 C5' DC B 12 9.974 5.355 -10.271 1.00 40.85 C ATOM 226 C4' DC B 12 10.593 4.377 -9.309 1.00 39.22 C ATOM 227 O4' DC B 12 12.044 4.657 -9.412 1.00 37.64 O ATOM 228 C3' DC B 12 10.189 4.517 -7.866 1.00 39.66 C ATOM 229 O3' DC B 12 10.243 3.213 -7.454 1.00 42.21 O ATOM 230 C2' DC B 12 11.399 5.215 -7.282 1.00 38.09 C ATOM 231 C1' DC B 12 12.528 4.657 -8.141 1.00 36.69 C ATOM 232 N1 DC B 12 13.765 5.495 -8.278 1.00 29.89 N ATOM 233 C2 DC B 12 14.975 4.796 -8.519 1.00 25.72 C ATOM 234 O2 DC B 12 14.867 3.586 -8.622 1.00 33.23 O ATOM 235 N3 DC B 12 16.131 5.495 -8.587 1.00 19.72 N ATOM 236 C4 DC B 12 16.077 6.799 -8.416 1.00 16.51 C ATOM 237 N4 DC B 12 17.260 7.451 -8.553 1.00 25.43 N ATOM 238 C5 DC B 12 14.975 7.497 -8.210 1.00 17.90 C ATOM 239 C6 DC B 12 13.792 6.845 -8.141 1.00 23.84 C ATOM 240 P DA B 13 9.060 2.375 -6.939 1.00 43.14 P ATOM 241 OP1 DA B 13 8.307 2.095 -8.210 1.00 46.97 O ATOM 242 OP2 DA B 13 8.388 2.980 -5.771 1.00 43.91 O ATOM 243 O5' DA B 13 9.759 1.071 -6.389 1.00 39.52 O ATOM 244 C5' DA B 13 10.351 0.233 -7.351 1.00 35.43 C ATOM 245 C4' DA B 13 11.426 -0.605 -6.767 1.00 32.41 C ATOM 246 O4' DA B 13 12.609 0.233 -6.526 1.00 30.53 O ATOM 247 C3' DA B 13 11.184 -1.304 -5.462 1.00 29.57 C ATOM 248 O3' DA B 13 12.071 -2.468 -5.427 1.00 32.14 O ATOM 249 C2' DA B 13 11.722 -0.279 -4.500 1.00 24.94 C ATOM 250 C1' DA B 13 12.985 0.233 -5.153 1.00 24.39 C ATOM 251 N9 DA B 13 13.308 1.630 -5.049 1.00 10.27 N ATOM 252 C8 DA B 13 12.340 2.561 -4.775 1.00 10.76 C ATOM 253 N7 DA B 13 12.932 3.772 -4.603 1.00 13.81 N ATOM 254 C5 DA B 13 14.222 3.679 -4.946 1.00 13.72 C ATOM 255 C6 DA B 13 15.271 4.563 -5.015 1.00 17.19 C ATOM 256 N6 DA B 13 15.082 5.914 -4.843 1.00 18.06 N ATOM 257 N1 DA B 13 16.534 4.144 -5.393 1.00 18.11 N ATOM 258 C2 DA B 13 16.669 2.794 -5.496 1.00 16.84 C ATOM 259 N3 DA B 13 15.728 1.816 -5.427 1.00 11.33 N ATOM 260 C4 DA B 13 14.518 2.328 -5.187 1.00 14.35 C ATOM 261 P DG B 14 11.749 -3.679 -4.362 1.00 30.93 P ATOM 262 OP1 DG B 14 11.964 -4.703 -5.462 1.00 29.85 O ATOM 263 OP2 DG B 14 10.566 -3.306 -3.538 1.00 30.49 O ATOM 264 O5' DG B 14 12.932 -3.399 -3.229 1.00 26.71 O ATOM 265 C5' DG B 14 14.249 -3.539 -3.710 1.00 24.60 C ATOM 266 C4' DG B 14 15.190 -3.027 -2.645 1.00 21.78 C ATOM 267 O4' DG B 14 15.029 -1.630 -2.714 1.00 17.75 O ATOM 268 C3' DG B 14 14.760 -3.399 -1.134 1.00 21.17 C ATOM 269 O3' DG B 14 15.916 -3.632 -0.343 1.00 17.05 O ATOM 270 C2' DG B 14 14.222 -2.002 -0.790 1.00 16.49 C ATOM 271 C1' DG B 14 15.271 -1.118 -1.477 1.00 17.37 C ATOM 272 N9 DG B 14 14.841 0.279 -1.580 1.00 14.84 N ATOM 273 C8 DG B 14 13.550 0.652 -1.237 1.00 15.37 C ATOM 274 N7 DG B 14 13.416 1.909 -1.340 1.00 17.08 N ATOM 275 C5 DG B 14 14.652 2.375 -1.546 1.00 13.25 C ATOM 276 C6 DG B 14 15.136 3.679 -1.580 1.00 15.33 C ATOM 277 O6 DG B 14 14.518 4.750 -1.477 1.00 14.62 O ATOM 278 N1 DG B 14 16.507 3.632 -1.821 1.00 13.47 N ATOM 279 C2 DG B 14 17.314 2.515 -1.992 1.00 9.35 C ATOM 280 N2 DG B 14 18.524 2.747 -2.267 1.00 13.95 N ATOM 281 N3 DG B 14 16.857 1.350 -1.855 1.00 14.29 N ATOM 282 C4 DG B 14 15.566 1.350 -1.717 1.00 14.94 C ATOM 283 P DG B 15 16.373 -4.983 0.343 1.00 15.87 P ATOM 284 OP1 DG B 15 16.857 -6.193 -0.447 1.00 18.04 O ATOM 285 OP2 DG B 15 15.324 -5.215 1.305 1.00 16.80 O ATOM 286 O5' DG B 15 17.637 -4.191 0.824 1.00 13.40 O ATOM 287 C5' DG B 15 18.793 -4.051 -0.034 1.00 7.43 C ATOM 288 C4' DG B 15 19.599 -2.934 0.584 1.00 8.17 C ATOM 289 O4' DG B 15 18.766 -1.676 0.481 1.00 14.55 O ATOM 290 C3' DG B 15 19.922 -2.841 2.095 1.00 15.04 C ATOM 291 O3' DG B 15 21.239 -2.235 2.027 1.00 15.83 O ATOM 292 C2' DG B 15 19.169 -1.723 2.782 1.00 16.58 C ATOM 293 C1' DG B 15 18.793 -0.792 1.614 1.00 16.52 C ATOM 294 N9 DG B 15 17.556 0.047 1.614 1.00 17.32 N ATOM 295 C8 DG B 15 16.239 -0.186 1.855 1.00 23.44 C ATOM 296 N7 DG B 15 15.459 0.885 1.924 1.00 25.36 N ATOM 297 C5 DG B 15 16.346 1.956 1.752 1.00 19.89 C ATOM 298 C6 DG B 15 16.077 3.353 1.683 1.00 14.25 C ATOM 299 O6 DG B 15 15.136 4.051 1.649 1.00 19.96 O ATOM 300 N1 DG B 15 17.233 4.051 1.511 1.00 10.78 N ATOM 301 C2 DG B 15 18.497 3.446 1.340 1.00 16.14 C ATOM 302 N2 DG B 15 19.465 4.284 1.099 1.00 18.34 N ATOM 303 N3 DG B 15 18.712 2.142 1.271 1.00 18.35 N ATOM 304 C4 DG B 15 17.610 1.444 1.511 1.00 18.08 C ATOM 305 P DC B 16 21.992 -2.235 3.366 1.00 21.34 P ATOM 306 OP1 DC B 16 23.363 -2.747 3.092 1.00 24.14 O ATOM 307 OP2 DC B 16 21.158 -2.841 4.397 1.00 18.94 O ATOM 308 O5' DC B 16 22.073 -0.698 3.675 1.00 24.72 O ATOM 309 C5' DC B 16 22.798 0.093 2.782 1.00 24.65 C ATOM 310 C4' DC B 16 22.852 1.490 3.332 1.00 23.07 C ATOM 311 O4' DC B 16 21.616 2.328 3.195 1.00 19.17 O ATOM 312 C3' DC B 16 23.336 1.583 4.775 1.00 22.88 C ATOM 313 O3' DC B 16 24.170 2.654 4.775 1.00 22.36 O ATOM 314 C2' DC B 16 21.965 1.909 5.427 1.00 22.75 C ATOM 315 C1' DC B 16 21.320 2.841 4.431 1.00 21.06 C ATOM 316 N1 DC B 16 19.895 2.701 4.637 1.00 21.31 N ATOM 317 C2 DC B 16 19.223 3.865 4.878 1.00 21.64 C ATOM 318 O2 DC B 16 19.868 4.889 4.912 1.00 19.16 O ATOM 319 N3 DC B 16 17.905 3.912 4.946 1.00 19.43 N ATOM 320 C4 DC B 16 17.287 2.747 4.912 1.00 15.62 C ATOM 321 N4 DC B 16 15.970 2.887 5.049 1.00 12.81 N ATOM 322 C5 DC B 16 17.905 1.490 4.706 1.00 19.01 C ATOM 323 C6 DC B 16 19.250 1.490 4.569 1.00 20.13 C HETATM 324 N1 5CM B 17 20.540 5.495 8.416 1.00 22.98 N HETATM 325 C2 5CM B 17 19.330 6.007 8.553 1.00 19.83 C HETATM 326 N3 5CM B 17 18.174 5.215 8.519 1.00 16.40 N HETATM 327 C4 5CM B 17 18.336 3.912 8.381 1.00 18.16 C HETATM 328 C5 5CM B 17 19.653 3.306 8.347 1.00 15.68 C HETATM 329 C5A 5CM B 17 19.841 1.863 8.210 1.00 12.99 C HETATM 330 C6 5CM B 17 20.701 4.098 8.278 1.00 21.24 C HETATM 331 O2 5CM B 17 19.250 7.264 8.622 1.00 25.35 O HETATM 332 N4 5CM B 17 17.180 3.213 8.416 1.00 21.06 N HETATM 333 C1' 5CM B 17 21.723 6.333 8.072 1.00 22.27 C HETATM 334 C2' 5CM B 17 22.960 6.333 9.000 1.00 22.27 C HETATM 335 C3' 5CM B 17 24.008 6.752 7.935 1.00 25.93 C HETATM 336 C4' 5CM B 17 23.497 6.519 6.526 1.00 23.86 C HETATM 337 O4' 5CM B 17 22.207 5.960 6.801 1.00 23.76 O HETATM 338 O3' 5CM B 17 24.600 8.149 8.038 1.00 31.78 O HETATM 339 C5' 5CM B 17 24.385 5.541 5.736 1.00 22.35 C HETATM 340 O5' 5CM B 17 24.627 4.377 6.526 1.00 20.73 O HETATM 341 P 5CM B 17 25.218 2.980 5.977 1.00 22.29 P HETATM 342 OP1 5CM B 17 26.509 3.446 5.462 1.00 22.15 O HETATM 343 OP2 5CM B 17 25.164 2.049 7.042 1.00 24.01 O ATOM 344 P DT B 18 25.353 8.615 9.378 1.00 34.91 P ATOM 345 OP1 DT B 18 26.025 9.872 8.897 1.00 34.99 O ATOM 346 OP2 DT B 18 26.078 7.451 10.030 1.00 32.98 O ATOM 347 O5' DT B 18 24.250 8.941 10.511 1.00 35.47 O ATOM 348 C5' DT B 18 23.471 10.105 10.202 1.00 37.19 C ATOM 349 C4' DT B 18 22.422 10.338 11.232 1.00 38.56 C ATOM 350 O4' DT B 18 21.293 9.406 11.198 1.00 38.11 O ATOM 351 C3' DT B 18 23.040 10.198 12.606 1.00 38.90 C ATOM 352 O3' DT B 18 22.476 11.176 13.396 1.00 41.40 O ATOM 353 C2' DT B 18 22.583 8.754 12.984 1.00 38.06 C ATOM 354 C1' DT B 18 21.105 8.801 12.435 1.00 36.33 C ATOM 355 N1 DT B 18 20.513 7.497 12.229 1.00 29.76 N ATOM 356 C2 DT B 18 19.142 7.451 12.022 1.00 26.24 C ATOM 357 O2 DT B 18 18.416 8.428 11.954 1.00 21.36 O ATOM 358 N3 DT B 18 18.497 6.240 11.919 1.00 23.40 N ATOM 359 C4 DT B 18 19.250 5.122 11.954 1.00 20.83 C ATOM 360 O4 DT B 18 18.658 4.098 11.748 1.00 21.85 O ATOM 361 C5 DT B 18 20.701 5.215 12.091 1.00 24.52 C ATOM 362 C7 DT B 18 21.481 3.958 12.091 1.00 27.61 C ATOM 363 C6 DT B 18 21.266 6.380 12.229 1.00 23.85 C ATOM 364 P DG B 19 23.014 12.573 13.809 1.00 40.68 P ATOM 365 OP1 DG B 19 23.094 13.364 12.538 1.00 40.58 O ATOM 366 OP2 DG B 19 24.116 12.433 14.736 1.00 42.61 O ATOM 367 O5' DG B 19 21.696 13.085 14.633 1.00 36.70 O ATOM 368 C5' DG B 19 20.648 13.690 13.912 1.00 39.04 C ATOM 369 C4' DG B 19 19.384 13.551 14.736 1.00 44.54 C ATOM 370 O4' DG B 19 19.088 12.107 14.839 1.00 44.89 O ATOM 371 C3' DG B 19 19.707 13.923 16.179 1.00 49.80 C ATOM 372 O3' DG B 19 18.470 14.296 16.831 1.00 57.68 O ATOM 373 C2' DG B 19 20.137 12.619 16.797 1.00 46.88 C ATOM 374 C1' DG B 19 19.035 11.735 16.213 1.00 44.83 C ATOM 375 N9 DG B 19 19.492 10.384 16.282 1.00 42.30 N ATOM 376 C8 DG B 19 20.755 9.965 16.351 1.00 44.30 C ATOM 377 N7 DG B 19 20.890 8.708 16.110 1.00 43.99 N ATOM 378 C5 DG B 19 19.626 8.289 15.870 1.00 39.76 C ATOM 379 C6 DG B 19 19.169 7.031 15.526 1.00 36.15 C ATOM 380 O6 DG B 19 19.814 6.007 15.389 1.00 35.06 O ATOM 381 N1 DG B 19 17.771 7.031 15.354 1.00 33.57 N ATOM 382 C2 DG B 19 16.964 8.149 15.526 1.00 31.55 C ATOM 383 N2 DG B 19 15.701 8.009 15.320 1.00 31.76 N ATOM 384 N3 DG B 19 17.475 9.313 15.767 1.00 36.98 N ATOM 385 C4 DG B 19 18.766 9.313 15.973 1.00 40.04 C ATOM 386 P DG B 20 18.067 15.739 17.518 1.00 59.44 P ATOM 387 OP1 DG B 20 17.610 16.531 16.385 1.00 61.57 O ATOM 388 OP2 DG B 20 19.223 16.252 18.343 1.00 61.38 O ATOM 389 O5' DG B 20 16.964 15.041 18.412 1.00 55.23 O ATOM 390 C5' DG B 20 16.050 14.296 17.587 1.00 53.11 C ATOM 391 C4' DG B 20 15.378 13.225 18.412 1.00 50.63 C ATOM 392 O4' DG B 20 16.050 11.968 18.274 1.00 48.04 O ATOM 393 C3' DG B 20 15.486 13.597 19.854 1.00 49.51 C ATOM 394 O3' DG B 20 14.168 13.364 20.438 1.00 50.33 O ATOM 395 C2' DG B 20 16.696 12.713 20.370 1.00 46.65 C ATOM 396 C1' DG B 20 16.265 11.502 19.579 1.00 44.58 C ATOM 397 N9 DG B 20 17.314 10.524 19.476 1.00 33.62 N ATOM 398 C8 DG B 20 18.551 10.896 19.717 1.00 30.27 C ATOM 399 N7 DG B 20 19.438 9.919 19.648 1.00 28.29 N ATOM 400 C5 DG B 20 18.712 8.848 19.339 1.00 28.74 C ATOM 401 C6 DG B 20 19.115 7.497 19.133 1.00 30.68 C ATOM 402 O6 DG B 20 20.218 7.078 19.236 1.00 32.30 O ATOM 403 N1 DG B 20 17.959 6.706 18.858 1.00 27.89 N ATOM 404 C2 DG B 20 16.696 7.218 18.721 1.00 23.31 C ATOM 405 N2 DG B 20 15.755 6.333 18.480 1.00 25.21 N ATOM 406 N3 DG B 20 16.319 8.428 18.927 1.00 29.83 N ATOM 407 C4 DG B 20 17.368 9.220 19.202 1.00 30.79 C TER 408 DG B 20 HETATM 409 O HOH A 26 21.669 6.612 2.439 1.00 21.83 O HETATM 410 O HOH A 27 14.142 -1.397 13.809 1.00 22.38 O HETATM 411 O HOH A 29 7.366 6.706 8.175 1.00 28.91 O HETATM 412 O HOH A 31 10.915 7.357 3.882 1.00 31.82 O HETATM 413 O HOH A 32 13.496 8.848 -1.821 1.00 32.27 O HETATM 414 O HOH A 33 18.013 16.391 6.080 1.00 33.90 O HETATM 415 O HOH A 36 16.561 9.965 -5.256 1.00 36.25 O HETATM 416 O HOH A 38 21.400 1.304 -5.462 1.00 37.65 O HETATM 417 O HOH A 41 17.986 10.757 6.630 1.00 40.54 O HETATM 418 O HOH A 42 11.614 15.087 9.584 1.00 36.87 O HETATM 419 O HOH A 44 20.540 9.872 6.080 1.00 42.72 O HETATM 420 O HOH A 48 11.883 9.965 13.671 1.00 49.71 O HETATM 421 O HOH A 49 15.190 11.409 9.618 1.00 53.11 O HETATM 422 O HOH A 55 9.947 10.990 3.092 1.00 32.74 O HETATM 423 O HOH A 57 26.885 0.000 -11.851 0.50 65.62 O HETATM 424 O HOH B 21 20.164 -1.211 6.458 1.00 16.61 O HETATM 425 O HOH B 22 13.147 0.698 2.233 1.00 17.87 O HETATM 426 O HOH B 23 12.932 -6.380 0.859 1.00 18.19 O HETATM 427 O HOH B 24 22.610 -4.703 6.286 1.00 17.96 O HETATM 428 O HOH B 25 16.561 0.279 8.107 1.00 21.34 O HETATM 429 O HOH B 28 14.679 0.279 5.393 1.00 26.79 O HETATM 430 O HOH B 30 9.248 -5.960 -2.095 1.00 30.44 O HETATM 431 O HOH B 34 10.082 -6.659 0.034 1.00 34.58 O HETATM 432 O HOH B 35 19.061 -7.497 -0.103 1.00 36.91 O HETATM 433 O HOH B 37 28.471 4.796 6.904 1.00 39.49 O HETATM 434 O HOH B 39 18.739 1.723 7.660 1.00 37.04 O HETATM 435 O HOH B 40 18.604 -0.838 -2.988 1.00 34.55 O HETATM 436 O HOH B 43 27.826 7.963 6.286 1.00 40.96 O HETATM 437 O HOH B 45 24.492 5.914 14.290 1.00 46.00 O HETATM 438 O HOH B 46 12.985 7.963 -4.603 1.00 49.78 O HETATM 439 O HOH B 47 19.142 1.583 11.404 1.00 52.36 O HETATM 440 O HOH B 50 24.223 -5.169 3.882 1.00 53.98 O HETATM 441 O HOH B 51 13.416 10.384 -5.668 1.00 57.07 O HETATM 442 O HOH B 52 15.620 0.326 11.026 1.00 56.74 O HETATM 443 O HOH B 53 21.642 16.065 11.095 1.00 63.73 O HETATM 444 O HOH B 54 28.417 1.909 4.672 1.00 56.00 O HETATM 445 O HOH B 56 26.885 0.000 15.148 0.50 48.18 O CONECT 109 137 CONECT 120 121 126 129 CONECT 121 120 122 127 CONECT 122 121 123 CONECT 123 122 124 128 CONECT 124 123 125 126 CONECT 125 124 CONECT 126 120 124 CONECT 127 121 CONECT 128 123 CONECT 129 120 130 133 CONECT 130 129 131 CONECT 131 130 132 134 CONECT 132 131 133 135 CONECT 133 129 132 CONECT 134 131 140 CONECT 135 132 136 CONECT 136 135 137 CONECT 137 109 136 138 139 CONECT 138 137 CONECT 139 137 CONECT 140 134 CONECT 313 341 CONECT 324 325 330 333 CONECT 325 324 326 331 CONECT 326 325 327 CONECT 327 326 328 332 CONECT 328 327 329 330 CONECT 329 328 CONECT 330 324 328 CONECT 331 325 CONECT 332 327 CONECT 333 324 334 337 CONECT 334 333 335 CONECT 335 334 336 338 CONECT 336 335 337 339 CONECT 337 333 336 CONECT 338 335 344 CONECT 339 336 340 CONECT 340 339 341 CONECT 341 313 340 342 343 CONECT 342 341 CONECT 343 341 CONECT 344 338 MASTER 373 0 2 0 0 0 0 6 443 2 44 2 END