data_138D # _entry.id 138D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 138D pdb_0000138d 10.2210/pdb138d/pdb RCSB ADJ051 ? ? WWPDB D_1000170088 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-01-15 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 138D _pdbx_database_status.recvd_initial_deposition_date 1993-09-15 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ramakrishnan, B.' 1 'Sundaralingam, M.' 2 # _citation.id primary _citation.title ;Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 32 _citation.page_first 11458 _citation.page_last 11468 _citation.year 1993 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8218212 _citation.pdbx_database_id_DOI 10.1021/bi00093a025 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramakrishnan, B.' 1 ? primary 'Sundaralingam, M.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3') ; 3046.980 1 ? ? ? ? 2 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DG)(DG)(DC)(DC)(DC)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCGGGCCCGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DC n 1 9 DG n 1 10 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DC 10 10 10 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 11 11 HOH HOH A . B 2 HOH 2 12 12 HOH HOH A . B 2 HOH 3 13 13 HOH HOH A . B 2 HOH 4 14 14 HOH HOH A . B 2 HOH 5 15 15 HOH HOH A . B 2 HOH 6 16 16 HOH HOH A . B 2 HOH 7 17 17 HOH HOH A . B 2 HOH 8 18 18 HOH HOH A . B 2 HOH 9 19 19 HOH HOH A . B 2 HOH 10 20 20 HOH HOH A . B 2 HOH 11 21 21 HOH HOH A . B 2 HOH 12 22 22 HOH HOH A . B 2 HOH 13 23 23 HOH HOH A . B 2 HOH 14 24 24 HOH HOH A . B 2 HOH 15 25 25 HOH HOH A . B 2 HOH 16 26 26 HOH HOH A . B 2 HOH 17 27 27 HOH HOH A . B 2 HOH 18 28 28 HOH HOH A . B 2 HOH 19 29 29 HOH HOH A . B 2 HOH 20 30 30 HOH HOH A . B 2 HOH 21 31 31 HOH HOH A . B 2 HOH 22 32 32 HOH HOH A . B 2 HOH 23 33 33 HOH HOH A . B 2 HOH 24 34 34 HOH HOH A . B 2 HOH 25 35 35 HOH HOH A . B 2 HOH 26 36 36 HOH HOH A . B 2 HOH 27 37 37 HOH HOH A . B 2 HOH 28 38 38 HOH HOH A . B 2 HOH 29 39 39 HOH HOH A . B 2 HOH 30 40 40 HOH HOH A . B 2 HOH 31 41 41 HOH HOH A . B 2 HOH 32 42 42 HOH HOH A . B 2 HOH 33 43 43 HOH HOH A . B 2 HOH 34 44 44 HOH HOH A . B 2 HOH 35 45 45 HOH HOH A . B 2 HOH 36 46 46 HOH HOH A . B 2 HOH 37 47 47 HOH HOH A . B 2 HOH 38 48 48 HOH HOH A . # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 138D _cell.length_a 39.110 _cell.length_b 39.110 _cell.length_c 79.230 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 138D _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 138D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57.15 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'NA CACODYLATE' ? ? ? 1 3 1 '[CO(NH3)6]CL3' ? ? ? 1 4 2 WATER ? ? ? 1 5 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 290.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 138D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.000 _reflns.d_resolution_high 1.800 _reflns.number_obs 3435 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 138D _refine.ls_number_reflns_obs 2298 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 1.800 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1830000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1830000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 240 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.60 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 31.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 3.90 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 138D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 138D _struct.title 'A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORM' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 138D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 138D _struct_ref.pdbx_db_accession 138D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 138D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 138D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 39.6150000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 3 A DC 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 3 A DC 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 3 A DC 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 8 A DG 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 8 A DG 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 8 A DG 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C6 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 3 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N1 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 3 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.349 _pdbx_validate_rmsd_bond.bond_target_value 1.391 _pdbx_validate_rmsd_bond.bond_deviation -0.042 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.007 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A DG 1 ? ? P A DC 2 ? ? OP2 A DC 2 ? ? 88.25 105.20 -16.95 2.20 Y 2 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 101.98 104.50 -2.52 0.40 N 3 1 "O4'" A DG 3 ? ? "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? 101.21 104.50 -3.29 0.40 N 4 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 95.40 102.20 -6.80 0.70 N 5 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 113.04 108.30 4.74 0.30 N 6 1 "O3'" A DG 4 ? ? P A DG 5 ? ? OP2 A DG 5 ? ? 119.21 110.50 8.71 1.10 Y 7 1 "O3'" A DG 4 ? ? P A DG 5 ? ? OP1 A DG 5 ? ? 84.29 105.20 -20.91 2.20 Y 8 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.34 108.30 4.04 0.30 N 9 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP2 A DC 6 ? ? 119.60 110.50 9.10 1.10 Y 10 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP1 A DC 6 ? ? 88.87 105.20 -16.33 2.20 Y 11 1 "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? "C2'" A DC 6 ? ? 97.78 102.20 -4.42 0.70 N 12 1 "O3'" A DC 6 ? ? P A DC 7 ? ? "O5'" A DC 7 ? ? 118.24 104.00 14.24 1.90 Y 13 1 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.88 102.20 -4.32 0.70 N 14 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.20 108.30 3.90 0.30 N 15 1 "O5'" A DC 8 ? ? "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? 104.16 109.40 -5.24 0.80 N 16 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.28 108.30 1.98 0.30 N 17 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.11 108.30 1.81 0.30 N 18 1 "O3'" A DG 9 ? ? P A DC 10 ? ? OP2 A DC 10 ? ? 118.81 110.50 8.31 1.10 Y 19 1 "O3'" A DG 9 ? ? P A DC 10 ? ? OP1 A DC 10 ? ? 91.50 105.20 -13.70 2.20 Y # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 3 ? ? 0.076 'SIDE CHAIN' 2 1 DG A 4 ? ? 0.097 'SIDE CHAIN' 3 1 DC A 6 ? ? 0.070 'SIDE CHAIN' 4 1 DC A 7 ? ? 0.075 'SIDE CHAIN' 5 1 DG A 9 ? ? 0.090 'SIDE CHAIN' # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 HOH O O N N 72 HOH H1 H N N 73 HOH H2 H N N 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 # _ndb_struct_conf_na.entry_id 138D _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 10 11_555 -0.287 -0.216 -0.127 -3.305 -7.021 -4.078 1 A_DG1:DC10_A A 1 ? A 10 ? 19 1 1 A DC 2 1_555 A DG 9 11_555 0.220 -0.359 -0.085 -0.627 -7.871 -1.069 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1 1 A DG 3 1_555 A DC 8 11_555 -0.103 -0.299 -0.022 1.214 -8.167 -2.546 3 A_DG3:DC8_A A 3 ? A 8 ? 19 1 1 A DG 4 1_555 A DC 7 11_555 -0.143 -0.214 0.168 10.461 -9.885 1.514 4 A_DG4:DC7_A A 4 ? A 7 ? 19 1 1 A DG 5 1_555 A DC 6 11_555 -0.428 -0.141 -0.235 2.939 -17.284 -3.332 5 A_DG5:DC6_A A 5 ? A 6 ? 19 1 1 A DC 6 1_555 A DG 5 11_555 0.428 -0.141 -0.235 -2.939 -17.284 -3.332 6 A_DC6:DG5_A A 6 ? A 5 ? 19 1 1 A DC 7 1_555 A DG 4 11_555 0.143 -0.214 0.168 -10.461 -9.885 1.514 7 A_DC7:DG4_A A 7 ? A 4 ? 19 1 1 A DC 8 1_555 A DG 3 11_555 0.103 -0.299 -0.022 -1.214 -8.167 -2.546 8 A_DC8:DG3_A A 8 ? A 3 ? 19 1 1 A DG 9 1_555 A DC 2 11_555 -0.220 -0.359 -0.085 0.627 -7.871 -1.069 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1 1 A DC 10 1_555 A DG 1 11_555 0.287 -0.216 -0.127 3.305 -7.021 -4.078 10 A_DC10:DG1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 10 11_555 A DC 2 1_555 A DG 9 11_555 0.476 -0.943 3.327 0.445 4.784 32.531 -2.484 -0.765 3.166 8.482 -0.790 32.875 1 AA_DG1DC2:DG9DC10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DC 2 1_555 A DG 9 11_555 A DG 3 1_555 A DC 8 11_555 -0.137 -1.500 3.224 -0.308 12.692 33.126 -4.158 0.184 2.500 21.311 0.518 35.412 2 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DG 3 1_555 A DC 8 11_555 A DG 4 1_555 A DC 7 11_555 -0.457 -1.604 3.120 -4.138 6.151 25.100 -5.061 -0.011 2.697 13.776 9.267 26.155 3 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DG 4 1_555 A DC 7 11_555 A DG 5 1_555 A DC 6 11_555 -0.878 -1.183 3.441 -2.268 11.161 32.546 -3.745 1.129 2.941 19.196 3.901 34.430 4 AA_DG4DG5:DC6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DG 5 1_555 A DC 6 11_555 A DC 6 1_555 A DG 5 11_555 0.000 -1.172 3.380 0.000 7.286 39.159 -2.568 0.000 3.122 10.757 0.000 39.804 5 AA_DG5DC6:DG5DC6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DC 6 1_555 A DG 5 11_555 A DC 7 1_555 A DG 4 11_555 0.878 -1.183 3.441 2.268 11.160 32.546 -3.745 -1.129 2.941 19.195 -3.901 34.430 6 AA_DC6DC7:DG4DG5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DC 7 1_555 A DG 4 11_555 A DC 8 1_555 A DG 3 11_555 0.457 -1.604 3.120 4.138 6.151 25.100 -5.061 0.011 2.697 13.776 -9.267 26.155 7 AA_DC7DC8:DG3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DC 8 1_555 A DG 3 11_555 A DG 9 1_555 A DC 2 11_555 0.137 -1.500 3.224 0.308 12.692 33.126 -4.158 -0.184 2.500 21.311 -0.518 35.412 8 AA_DC8DG9:DC2DG3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DG 9 1_555 A DC 2 11_555 A DC 10 1_555 A DG 1 11_555 -0.476 -0.943 3.327 -0.445 4.784 32.531 -2.484 0.765 3.166 8.482 0.790 32.875 9 AA_DG9DC10:DG1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _atom_sites.entry_id 138D _atom_sites.fract_transf_matrix[1][1] 0.025569 _atom_sites.fract_transf_matrix[1][2] 0.014762 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029524 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012621 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? -9.792 20.175 16.605 1.00 40.80 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -10.004 18.764 16.607 1.00 32.20 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -9.310 18.144 15.441 1.00 26.15 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -9.883 18.625 14.231 1.00 27.69 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -7.911 18.643 15.413 1.00 25.04 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -7.147 17.842 16.268 1.00 24.41 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -7.595 18.459 13.954 1.00 21.41 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -8.848 18.920 13.266 1.00 22.28 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -8.857 20.366 13.008 1.00 21.48 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? -9.564 21.344 13.663 1.00 23.30 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? -9.471 22.522 13.151 1.00 22.71 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? -8.662 22.321 12.051 1.00 20.95 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? -8.240 23.260 11.086 1.00 21.64 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? -8.511 24.456 11.041 1.00 24.70 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? -7.454 22.672 10.116 1.00 21.41 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? -7.108 21.344 10.099 1.00 18.47 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? -6.301 20.962 9.109 1.00 17.94 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? -7.513 20.454 11.012 1.00 19.76 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? -8.272 21.014 11.961 1.00 19.56 ? 1 DG A C4 1 ATOM 20 P P . DC A 1 2 ? -5.842 18.435 16.986 1.00 33.80 ? 2 DC A P 1 ATOM 21 O OP1 . DC A 1 2 ? -5.320 17.614 18.103 1.00 37.95 ? 2 DC A OP1 1 ATOM 22 O OP2 . DC A 1 2 ? -6.608 19.673 17.255 1.00 36.53 ? 2 DC A OP2 1 ATOM 23 O "O5'" . DC A 1 2 ? -4.635 18.783 15.989 1.00 32.84 ? 2 DC A "O5'" 1 ATOM 24 C "C5'" . DC A 1 2 ? -4.025 17.757 15.217 1.00 25.01 ? 2 DC A "C5'" 1 ATOM 25 C "C4'" . DC A 1 2 ? -3.421 18.338 13.956 1.00 23.23 ? 2 DC A "C4'" 1 ATOM 26 O "O4'" . DC A 1 2 ? -4.443 19.028 13.259 1.00 24.18 ? 2 DC A "O4'" 1 ATOM 27 C "C3'" . DC A 1 2 ? -2.439 19.427 14.223 1.00 23.69 ? 2 DC A "C3'" 1 ATOM 28 O "O3'" . DC A 1 2 ? -1.186 18.948 14.586 1.00 31.14 ? 2 DC A "O3'" 1 ATOM 29 C "C2'" . DC A 1 2 ? -2.395 20.104 12.915 1.00 20.80 ? 2 DC A "C2'" 1 ATOM 30 C "C1'" . DC A 1 2 ? -3.865 20.140 12.571 1.00 22.58 ? 2 DC A "C1'" 1 ATOM 31 N N1 . DC A 1 2 ? -4.555 21.386 12.985 1.00 23.14 ? 2 DC A N1 1 ATOM 32 C C2 . DC A 1 2 ? -4.366 22.435 12.129 1.00 23.26 ? 2 DC A C2 1 ATOM 33 O O2 . DC A 1 2 ? -3.612 22.272 11.167 1.00 22.26 ? 2 DC A O2 1 ATOM 34 N N3 . DC A 1 2 ? -5.030 23.597 12.371 1.00 19.90 ? 2 DC A N3 1 ATOM 35 C C4 . DC A 1 2 ? -5.771 23.746 13.463 1.00 20.66 ? 2 DC A C4 1 ATOM 36 N N4 . DC A 1 2 ? -6.502 24.839 13.568 1.00 17.52 ? 2 DC A N4 1 ATOM 37 C C5 . DC A 1 2 ? -5.968 22.669 14.382 1.00 21.84 ? 2 DC A C5 1 ATOM 38 C C6 . DC A 1 2 ? -5.435 21.477 14.044 1.00 23.82 ? 2 DC A C6 1 ATOM 39 P P . DG A 1 3 ? -0.230 19.863 15.496 1.00 34.22 ? 3 DG A P 1 ATOM 40 O OP1 . DG A 1 3 ? 0.729 18.801 15.863 1.00 38.19 ? 3 DG A OP1 1 ATOM 41 O OP2 . DG A 1 3 ? -0.965 20.618 16.538 1.00 33.09 ? 3 DG A OP2 1 ATOM 42 O "O5'" . DG A 1 3 ? 0.506 20.900 14.500 1.00 27.77 ? 3 DG A "O5'" 1 ATOM 43 C "C5'" . DG A 1 3 ? 1.344 20.416 13.474 1.00 22.90 ? 3 DG A "C5'" 1 ATOM 44 C "C4'" . DG A 1 3 ? 1.594 21.544 12.550 1.00 23.41 ? 3 DG A "C4'" 1 ATOM 45 O "O4'" . DG A 1 3 ? 0.328 22.063 12.189 1.00 27.45 ? 3 DG A "O4'" 1 ATOM 46 C "C3'" . DG A 1 3 ? 2.179 22.694 13.283 1.00 25.09 ? 3 DG A "C3'" 1 ATOM 47 O "O3'" . DG A 1 3 ? 3.569 22.600 13.396 1.00 28.96 ? 3 DG A "O3'" 1 ATOM 48 C "C2'" . DG A 1 3 ? 1.836 23.816 12.362 1.00 26.32 ? 3 DG A "C2'" 1 ATOM 49 C "C1'" . DG A 1 3 ? 0.454 23.479 11.913 1.00 25.75 ? 3 DG A "C1'" 1 ATOM 50 N N9 . DG A 1 3 ? -0.475 24.190 12.788 1.00 21.20 ? 3 DG A N9 1 ATOM 51 C C8 . DG A 1 3 ? -1.287 23.640 13.746 1.00 18.65 ? 3 DG A C8 1 ATOM 52 N N7 . DG A 1 3 ? -2.157 24.476 14.225 1.00 19.41 ? 3 DG A N7 1 ATOM 53 C C5 . DG A 1 3 ? -2.009 25.598 13.433 1.00 16.09 ? 3 DG A C5 1 ATOM 54 C C6 . DG A 1 3 ? -2.749 26.762 13.429 1.00 11.30 ? 3 DG A C6 1 ATOM 55 O O6 . DG A 1 3 ? -3.716 27.039 14.106 1.00 18.82 ? 3 DG A O6 1 ATOM 56 N N1 . DG A 1 3 ? -2.265 27.663 12.550 1.00 17.41 ? 3 DG A N1 1 ATOM 57 C C2 . DG A 1 3 ? -1.202 27.449 11.718 1.00 17.90 ? 3 DG A C2 1 ATOM 58 N N2 . DG A 1 3 ? -0.851 28.487 10.981 1.00 21.30 ? 3 DG A N2 1 ATOM 59 N N3 . DG A 1 3 ? -0.537 26.303 11.626 1.00 20.69 ? 3 DG A N3 1 ATOM 60 C C4 . DG A 1 3 ? -0.966 25.441 12.563 1.00 20.92 ? 3 DG A C4 1 ATOM 61 P P . DG A 1 4 ? 4.301 23.380 14.573 1.00 34.60 ? 4 DG A P 1 ATOM 62 O OP1 . DG A 1 4 ? 5.590 22.662 14.484 1.00 42.80 ? 4 DG A OP1 1 ATOM 63 O OP2 . DG A 1 4 ? 3.497 23.355 15.822 1.00 37.77 ? 4 DG A OP2 1 ATOM 64 O "O5'" . DG A 1 4 ? 4.531 24.908 14.144 1.00 33.45 ? 4 DG A "O5'" 1 ATOM 65 C "C5'" . DG A 1 4 ? 5.304 25.224 13.010 1.00 27.01 ? 4 DG A "C5'" 1 ATOM 66 C "C4'" . DG A 1 4 ? 4.918 26.604 12.571 1.00 30.32 ? 4 DG A "C4'" 1 ATOM 67 O "O4'" . DG A 1 4 ? 3.503 26.657 12.360 1.00 31.83 ? 4 DG A "O4'" 1 ATOM 68 C "C3'" . DG A 1 4 ? 5.180 27.628 13.641 1.00 31.17 ? 4 DG A "C3'" 1 ATOM 69 O "O3'" . DG A 1 4 ? 6.530 28.029 13.638 1.00 35.44 ? 4 DG A "O3'" 1 ATOM 70 C "C2'" . DG A 1 4 ? 4.346 28.699 13.018 1.00 35.26 ? 4 DG A "C2'" 1 ATOM 71 C "C1'" . DG A 1 4 ? 3.043 27.995 12.647 1.00 32.37 ? 4 DG A "C1'" 1 ATOM 72 N N9 . DG A 1 4 ? 2.045 28.045 13.762 1.00 26.23 ? 4 DG A N9 1 ATOM 73 C C8 . DG A 1 4 ? 1.642 27.021 14.584 1.00 25.81 ? 4 DG A C8 1 ATOM 74 N N7 . DG A 1 4 ? 0.583 27.301 15.284 1.00 26.06 ? 4 DG A N7 1 ATOM 75 C C5 . DG A 1 4 ? 0.222 28.567 14.847 1.00 20.58 ? 4 DG A C5 1 ATOM 76 C C6 . DG A 1 4 ? -0.880 29.368 15.220 1.00 21.27 ? 4 DG A C6 1 ATOM 77 O O6 . DG A 1 4 ? -1.798 29.066 15.974 1.00 19.85 ? 4 DG A O6 1 ATOM 78 N N1 . DG A 1 4 ? -0.848 30.617 14.630 1.00 19.53 ? 4 DG A N1 1 ATOM 79 C C2 . DG A 1 4 ? 0.130 31.046 13.797 1.00 17.40 ? 4 DG A C2 1 ATOM 80 N N2 . DG A 1 4 ? 0.030 32.298 13.402 1.00 18.28 ? 4 DG A N2 1 ATOM 81 N N3 . DG A 1 4 ? 1.157 30.283 13.407 1.00 23.92 ? 4 DG A N3 1 ATOM 82 C C4 . DG A 1 4 ? 1.140 29.057 13.972 1.00 22.61 ? 4 DG A C4 1 ATOM 83 P P . DG A 1 5 ? 7.146 28.771 14.901 1.00 37.48 ? 5 DG A P 1 ATOM 84 O OP1 . DG A 1 5 ? 8.427 28.623 14.178 1.00 42.01 ? 5 DG A OP1 1 ATOM 85 O OP2 . DG A 1 5 ? 6.955 28.187 16.244 1.00 38.64 ? 5 DG A OP2 1 ATOM 86 O "O5'" . DG A 1 5 ? 6.801 30.316 14.971 1.00 41.44 ? 5 DG A "O5'" 1 ATOM 87 C "C5'" . DG A 1 5 ? 7.392 31.236 14.061 1.00 33.16 ? 5 DG A "C5'" 1 ATOM 88 C "C4'" . DG A 1 5 ? 6.650 32.560 14.165 1.00 30.68 ? 5 DG A "C4'" 1 ATOM 89 O "O4'" . DG A 1 5 ? 5.279 32.332 13.807 1.00 31.19 ? 5 DG A "O4'" 1 ATOM 90 C "C3'" . DG A 1 5 ? 6.615 33.093 15.606 1.00 28.76 ? 5 DG A "C3'" 1 ATOM 91 O "O3'" . DG A 1 5 ? 7.744 33.883 15.916 1.00 24.89 ? 5 DG A "O3'" 1 ATOM 92 C "C2'" . DG A 1 5 ? 5.390 33.943 15.524 1.00 27.41 ? 5 DG A "C2'" 1 ATOM 93 C "C1'" . DG A 1 5 ? 4.455 33.093 14.696 1.00 27.75 ? 5 DG A "C1'" 1 ATOM 94 N N9 . DG A 1 5 ? 3.681 32.242 15.604 1.00 24.20 ? 5 DG A N9 1 ATOM 95 C C8 . DG A 1 5 ? 3.737 30.905 15.860 1.00 21.74 ? 5 DG A C8 1 ATOM 96 N N7 . DG A 1 5 ? 2.763 30.487 16.607 1.00 25.60 ? 5 DG A N7 1 ATOM 97 C C5 . DG A 1 5 ? 1.947 31.607 16.754 1.00 20.65 ? 5 DG A C5 1 ATOM 98 C C6 . DG A 1 5 ? 0.741 31.777 17.471 1.00 21.50 ? 5 DG A C6 1 ATOM 99 O O6 . DG A 1 5 ? 0.123 30.947 18.135 1.00 23.47 ? 5 DG A O6 1 ATOM 100 N N1 . DG A 1 5 ? 0.312 33.090 17.424 1.00 19.38 ? 5 DG A N1 1 ATOM 101 C C2 . DG A 1 5 ? 0.948 34.124 16.761 1.00 19.64 ? 5 DG A C2 1 ATOM 102 N N2 . DG A 1 5 ? 0.416 35.347 16.857 1.00 16.68 ? 5 DG A N2 1 ATOM 103 N N3 . DG A 1 5 ? 2.082 33.953 16.091 1.00 19.72 ? 5 DG A N3 1 ATOM 104 C C4 . DG A 1 5 ? 2.528 32.684 16.166 1.00 22.61 ? 5 DG A C4 1 ATOM 105 P P . DC A 1 6 ? 8.199 34.035 17.401 1.00 26.72 ? 6 DC A P 1 ATOM 106 O OP1 . DC A 1 6 ? 9.374 34.791 16.933 1.00 32.23 ? 6 DC A OP1 1 ATOM 107 O OP2 . DC A 1 6 ? 8.367 32.838 18.234 1.00 27.74 ? 6 DC A OP2 1 ATOM 108 O "O5'" . DC A 1 6 ? 7.217 35.043 18.161 1.00 26.42 ? 6 DC A "O5'" 1 ATOM 109 C "C5'" . DC A 1 6 ? 7.200 36.415 17.836 1.00 20.76 ? 6 DC A "C5'" 1 ATOM 110 C "C4'" . DC A 1 6 ? 6.002 37.038 18.456 1.00 18.08 ? 6 DC A "C4'" 1 ATOM 111 O "O4'" . DC A 1 6 ? 4.832 36.332 18.000 1.00 20.64 ? 6 DC A "O4'" 1 ATOM 112 C "C3'" . DC A 1 6 ? 5.993 36.837 19.907 1.00 18.36 ? 6 DC A "C3'" 1 ATOM 113 O "O3'" . DC A 1 6 ? 6.908 37.674 20.537 1.00 20.88 ? 6 DC A "O3'" 1 ATOM 114 C "C2'" . DC A 1 6 ? 4.540 37.114 20.141 1.00 15.33 ? 6 DC A "C2'" 1 ATOM 115 C "C1'" . DC A 1 6 ? 3.872 36.281 19.056 1.00 19.91 ? 6 DC A "C1'" 1 ATOM 116 N N1 . DC A 1 6 ? 3.608 34.855 19.409 1.00 21.87 ? 6 DC A N1 1 ATOM 117 C C2 . DC A 1 6 ? 2.449 34.616 20.111 1.00 18.29 ? 6 DC A C2 1 ATOM 118 O O2 . DC A 1 6 ? 1.786 35.541 20.564 1.00 23.46 ? 6 DC A O2 1 ATOM 119 N N3 . DC A 1 6 ? 2.071 33.349 20.300 1.00 20.36 ? 6 DC A N3 1 ATOM 120 C C4 . DC A 1 6 ? 2.903 32.351 20.036 1.00 20.81 ? 6 DC A C4 1 ATOM 121 N N4 . DC A 1 6 ? 2.524 31.121 20.370 1.00 20.13 ? 6 DC A N4 1 ATOM 122 C C5 . DC A 1 6 ? 4.156 32.563 19.399 1.00 17.34 ? 6 DC A C5 1 ATOM 123 C C6 . DC A 1 6 ? 4.405 33.816 19.002 1.00 18.93 ? 6 DC A C6 1 ATOM 124 P P . DC A 1 7 ? 7.449 37.319 21.993 1.00 30.24 ? 7 DC A P 1 ATOM 125 O OP1 . DC A 1 7 ? 8.254 38.554 22.162 1.00 29.97 ? 7 DC A OP1 1 ATOM 126 O OP2 . DC A 1 7 ? 8.117 35.999 21.867 1.00 31.90 ? 7 DC A OP2 1 ATOM 127 O "O5'" . DC A 1 7 ? 6.387 37.234 23.201 1.00 28.00 ? 7 DC A "O5'" 1 ATOM 128 C "C5'" . DC A 1 7 ? 5.574 38.366 23.497 1.00 29.85 ? 7 DC A "C5'" 1 ATOM 129 C "C4'" . DC A 1 7 ? 4.292 38.002 24.233 1.00 24.59 ? 7 DC A "C4'" 1 ATOM 130 O "O4'" . DC A 1 7 ? 3.482 37.116 23.459 1.00 21.11 ? 7 DC A "O4'" 1 ATOM 131 C "C3'" . DC A 1 7 ? 4.627 37.269 25.515 1.00 25.57 ? 7 DC A "C3'" 1 ATOM 132 O "O3'" . DC A 1 7 ? 5.086 38.187 26.507 1.00 29.99 ? 7 DC A "O3'" 1 ATOM 133 C "C2'" . DC A 1 7 ? 3.282 36.645 25.753 1.00 22.98 ? 7 DC A "C2'" 1 ATOM 134 C "C1'" . DC A 1 7 ? 2.899 36.156 24.353 1.00 20.38 ? 7 DC A "C1'" 1 ATOM 135 N N1 . DC A 1 7 ? 3.330 34.770 24.046 1.00 14.89 ? 7 DC A N1 1 ATOM 136 C C2 . DC A 1 7 ? 2.504 33.799 24.506 1.00 17.34 ? 7 DC A C2 1 ATOM 137 O O2 . DC A 1 7 ? 1.578 34.088 25.250 1.00 19.09 ? 7 DC A O2 1 ATOM 138 N N3 . DC A 1 7 ? 2.722 32.532 24.142 1.00 16.61 ? 7 DC A N3 1 ATOM 139 C C4 . DC A 1 7 ? 3.752 32.209 23.382 1.00 16.75 ? 7 DC A C4 1 ATOM 140 N N4 . DC A 1 7 ? 3.855 30.952 22.982 1.00 19.34 ? 7 DC A N4 1 ATOM 141 C C5 . DC A 1 7 ? 4.699 33.181 22.963 1.00 17.62 ? 7 DC A C5 1 ATOM 142 C C6 . DC A 1 7 ? 4.413 34.459 23.277 1.00 16.23 ? 7 DC A C6 1 ATOM 143 P P . DC A 1 8 ? 6.074 37.701 27.657 1.00 31.61 ? 8 DC A P 1 ATOM 144 O OP1 . DC A 1 8 ? 6.488 38.871 28.442 1.00 32.57 ? 8 DC A OP1 1 ATOM 145 O OP2 . DC A 1 8 ? 7.053 36.700 27.186 1.00 32.16 ? 8 DC A OP2 1 ATOM 146 O "O5'" . DC A 1 8 ? 4.957 36.950 28.472 1.00 22.93 ? 8 DC A "O5'" 1 ATOM 147 C "C5'" . DC A 1 8 ? 5.294 35.929 29.364 1.00 20.90 ? 8 DC A "C5'" 1 ATOM 148 C "C4'" . DC A 1 8 ? 4.003 35.240 29.633 1.00 21.44 ? 8 DC A "C4'" 1 ATOM 149 O "O4'" . DC A 1 8 ? 3.560 34.676 28.390 1.00 22.76 ? 8 DC A "O4'" 1 ATOM 150 C "C3'" . DC A 1 8 ? 4.176 34.056 30.530 1.00 24.98 ? 8 DC A "C3'" 1 ATOM 151 O "O3'" . DC A 1 8 ? 4.092 34.394 31.901 1.00 27.72 ? 8 DC A "O3'" 1 ATOM 152 C "C2'" . DC A 1 8 ? 2.994 33.272 30.134 1.00 20.52 ? 8 DC A "C2'" 1 ATOM 153 C "C1'" . DC A 1 8 ? 2.927 33.431 28.645 1.00 20.06 ? 8 DC A "C1'" 1 ATOM 154 N N1 . DC A 1 8 ? 3.643 32.348 27.964 1.00 20.10 ? 8 DC A N1 1 ATOM 155 C C2 . DC A 1 8 ? 2.959 31.148 27.862 1.00 21.12 ? 8 DC A C2 1 ATOM 156 O O2 . DC A 1 8 ? 1.875 30.992 28.414 1.00 20.78 ? 8 DC A O2 1 ATOM 157 N N3 . DC A 1 8 ? 3.491 30.165 27.116 1.00 20.81 ? 8 DC A N3 1 ATOM 158 C C4 . DC A 1 8 ? 4.626 30.359 26.454 1.00 18.20 ? 8 DC A C4 1 ATOM 159 N N4 . DC A 1 8 ? 5.133 29.333 25.793 1.00 23.92 ? 8 DC A N4 1 ATOM 160 C C5 . DC A 1 8 ? 5.307 31.620 26.452 1.00 22.56 ? 8 DC A C5 1 ATOM 161 C C6 . DC A 1 8 ? 4.777 32.587 27.227 1.00 21.56 ? 8 DC A C6 1 ATOM 162 P P . DG A 1 9 ? 5.059 33.657 32.917 1.00 28.68 ? 9 DG A P 1 ATOM 163 O OP1 . DG A 1 9 ? 4.805 34.446 34.129 1.00 34.58 ? 9 DG A OP1 1 ATOM 164 O OP2 . DG A 1 9 ? 6.437 33.452 32.414 1.00 31.72 ? 9 DG A OP2 1 ATOM 165 O "O5'" . DG A 1 9 ? 4.342 32.241 33.041 1.00 26.68 ? 9 DG A "O5'" 1 ATOM 166 C "C5'" . DG A 1 9 ? 3.108 32.140 33.713 1.00 27.93 ? 9 DG A "C5'" 1 ATOM 167 C "C4'" . DG A 1 9 ? 2.522 30.751 33.582 1.00 30.66 ? 9 DG A "C4'" 1 ATOM 168 O "O4'" . DG A 1 9 ? 2.377 30.399 32.217 1.00 30.43 ? 9 DG A "O4'" 1 ATOM 169 C "C3'" . DG A 1 9 ? 3.403 29.667 34.156 1.00 29.94 ? 9 DG A "C3'" 1 ATOM 170 O "O3'" . DG A 1 9 ? 3.235 29.599 35.555 1.00 33.09 ? 9 DG A "O3'" 1 ATOM 171 C "C2'" . DG A 1 9 ? 2.786 28.470 33.491 1.00 28.39 ? 9 DG A "C2'" 1 ATOM 172 C "C1'" . DG A 1 9 ? 2.598 28.993 32.091 1.00 27.13 ? 9 DG A "C1'" 1 ATOM 173 N N9 . DG A 1 9 ? 3.802 28.741 31.289 1.00 21.53 ? 9 DG A N9 1 ATOM 174 C C8 . DG A 1 9 ? 4.715 29.615 30.756 1.00 15.03 ? 9 DG A C8 1 ATOM 175 N N7 . DG A 1 9 ? 5.357 29.107 29.746 1.00 17.54 ? 9 DG A N7 1 ATOM 176 C C5 . DG A 1 9 ? 4.806 27.839 29.565 1.00 16.95 ? 9 DG A C5 1 ATOM 177 C C6 . DG A 1 9 ? 5.154 26.785 28.684 1.00 18.75 ? 9 DG A C6 1 ATOM 178 O O6 . DG A 1 9 ? 6.022 26.759 27.824 1.00 22.30 ? 9 DG A O6 1 ATOM 179 N N1 . DG A 1 9 ? 4.376 25.666 28.874 1.00 17.62 ? 9 DG A N1 1 ATOM 180 C C2 . DG A 1 9 ? 3.416 25.538 29.847 1.00 16.49 ? 9 DG A C2 1 ATOM 181 N N2 . DG A 1 9 ? 2.713 24.407 29.891 1.00 17.06 ? 9 DG A N2 1 ATOM 182 N N3 . DG A 1 9 ? 3.166 26.488 30.741 1.00 19.05 ? 9 DG A N3 1 ATOM 183 C C4 . DG A 1 9 ? 3.889 27.603 30.533 1.00 18.79 ? 9 DG A C4 1 ATOM 184 P P . DC A 1 10 ? 4.445 29.107 36.477 1.00 36.61 ? 10 DC A P 1 ATOM 185 O OP1 . DC A 1 10 ? 3.715 29.491 37.707 1.00 40.08 ? 10 DC A OP1 1 ATOM 186 O OP2 . DC A 1 10 ? 5.812 29.634 36.209 1.00 39.59 ? 10 DC A OP2 1 ATOM 187 O "O5'" . DC A 1 10 ? 4.467 27.497 36.367 1.00 31.28 ? 10 DC A "O5'" 1 ATOM 188 C "C5'" . DC A 1 10 ? 3.364 26.741 36.834 1.00 25.12 ? 10 DC A "C5'" 1 ATOM 189 C "C4'" . DC A 1 10 ? 3.499 25.361 36.299 1.00 25.32 ? 10 DC A "C4'" 1 ATOM 190 O "O4'" . DC A 1 10 ? 3.512 25.458 34.873 1.00 26.96 ? 10 DC A "O4'" 1 ATOM 191 C "C3'" . DC A 1 10 ? 4.882 24.819 36.619 1.00 24.45 ? 10 DC A "C3'" 1 ATOM 192 O "O3'" . DC A 1 10 ? 5.090 24.453 37.985 1.00 30.68 ? 10 DC A "O3'" 1 ATOM 193 C "C2'" . DC A 1 10 ? 4.934 23.722 35.609 1.00 22.95 ? 10 DC A "C2'" 1 ATOM 194 C "C1'" . DC A 1 10 ? 4.326 24.394 34.368 1.00 22.85 ? 10 DC A "C1'" 1 ATOM 195 N N1 . DC A 1 10 ? 5.316 24.958 33.431 1.00 19.54 ? 10 DC A N1 1 ATOM 196 C C2 . DC A 1 10 ? 5.703 24.123 32.422 1.00 20.19 ? 10 DC A C2 1 ATOM 197 O O2 . DC A 1 10 ? 5.289 22.972 32.433 1.00 22.69 ? 10 DC A O2 1 ATOM 198 N N3 . DC A 1 10 ? 6.526 24.594 31.454 1.00 18.28 ? 10 DC A N3 1 ATOM 199 C C4 . DC A 1 10 ? 7.004 25.844 31.526 1.00 20.35 ? 10 DC A C4 1 ATOM 200 N N4 . DC A 1 10 ? 7.786 26.310 30.548 1.00 16.97 ? 10 DC A N4 1 ATOM 201 C C5 . DC A 1 10 ? 6.675 26.705 32.615 1.00 18.52 ? 10 DC A C5 1 ATOM 202 C C6 . DC A 1 10 ? 5.772 26.242 33.496 1.00 22.14 ? 10 DC A C6 1 HETATM 203 O O . HOH B 2 . ? 8.144 28.059 27.328 1.00 48.69 ? 11 HOH A O 1 HETATM 204 O O . HOH B 2 . ? -1.384 21.273 9.423 1.00 67.72 ? 12 HOH A O 1 HETATM 205 O O . HOH B 2 . ? 3.373 31.385 11.058 1.00 53.44 ? 13 HOH A O 1 HETATM 206 O O . HOH B 2 . ? 6.729 30.739 18.334 1.00 43.48 ? 14 HOH A O 1 HETATM 207 O O . HOH B 2 . ? 0.615 38.409 20.866 1.00 54.71 ? 15 HOH A O 1 HETATM 208 O O . HOH B 2 . ? 7.456 30.266 33.876 1.00 67.84 ? 16 HOH A O 1 HETATM 209 O O . HOH B 2 . ? 10.042 37.561 15.380 1.00 63.93 ? 17 HOH A O 1 HETATM 210 O O . HOH B 2 . ? 6.421 30.212 20.963 1.00 45.90 ? 18 HOH A O 1 HETATM 211 O O . HOH B 2 . ? 7.571 34.671 24.786 1.00 62.53 ? 19 HOH A O 1 HETATM 212 O O . HOH B 2 . ? -7.095 22.274 17.348 1.00 59.21 ? 20 HOH A O 1 HETATM 213 O O . HOH B 2 . ? 0.888 26.128 32.281 1.00 77.43 ? 21 HOH A O 1 HETATM 214 O O . HOH B 2 . ? -11.562 24.622 14.830 1.00 71.85 ? 22 HOH A O 1 HETATM 215 O O . HOH B 2 . ? -3.857 15.740 19.755 1.00 96.12 ? 23 HOH A O 1 HETATM 216 O O . HOH B 2 . ? -8.100 16.902 19.709 1.00 58.28 ? 24 HOH A O 1 HETATM 217 O O . HOH B 2 . ? 4.393 29.021 18.614 1.00 100.44 ? 25 HOH A O 1 HETATM 218 O O . HOH B 2 . ? -4.341 20.626 18.291 1.00 67.07 ? 26 HOH A O 1 HETATM 219 O O . HOH B 2 . ? 0.932 24.169 34.520 1.00 75.80 ? 27 HOH A O 1 HETATM 220 O O . HOH B 2 . ? 7.875 30.411 29.640 1.00 69.23 ? 28 HOH A O 1 HETATM 221 O O . HOH B 2 . ? 10.692 30.345 16.278 1.00 89.07 ? 29 HOH A O 1 HETATM 222 O O . HOH B 2 . ? 11.028 36.106 19.972 1.00 66.52 ? 30 HOH A O 1 HETATM 223 O O . HOH B 2 . ? 1.359 26.872 9.808 1.00 80.01 ? 31 HOH A O 1 HETATM 224 O O . HOH B 2 . ? -8.201 24.812 15.778 1.00 52.20 ? 32 HOH A O 1 HETATM 225 O O . HOH B 2 . ? -4.708 26.031 16.319 1.00 65.11 ? 33 HOH A O 1 HETATM 226 O O . HOH B 2 . ? 8.443 34.456 30.664 1.00 85.38 ? 34 HOH A O 1 HETATM 227 O O . HOH B 2 . ? 8.039 33.841 28.068 1.00 88.57 ? 35 HOH A O 1 HETATM 228 O O . HOH B 2 . ? 7.729 33.170 21.112 1.00 65.65 ? 36 HOH A O 1 HETATM 229 O O . HOH B 2 . ? 6.866 36.144 33.434 1.00 110.24 ? 37 HOH A O 1 HETATM 230 O O . HOH B 2 . ? 8.608 37.801 31.316 1.00 87.21 ? 38 HOH A O 1 HETATM 231 O O . HOH B 2 . ? -0.092 31.828 30.285 1.00 58.66 ? 39 HOH A O 1 HETATM 232 O O . HOH B 2 . ? 8.783 23.862 15.220 1.00 107.92 ? 40 HOH A O 1 HETATM 233 O O . HOH B 2 . ? -3.902 23.093 16.681 1.00 59.40 ? 41 HOH A O 1 HETATM 234 O O . HOH B 2 . ? 12.322 33.418 18.994 1.00 116.93 ? 42 HOH A O 1 HETATM 235 O O . HOH B 2 . ? 9.173 28.778 32.008 1.00 84.47 ? 43 HOH A O 1 HETATM 236 O O . HOH B 2 . ? 10.259 32.302 20.819 1.00 117.19 ? 44 HOH A O 1 HETATM 237 O O . HOH B 2 . ? 5.174 40.664 31.066 1.00 81.09 ? 45 HOH A O 1 HETATM 238 O O . HOH B 2 . ? 6.735 23.109 17.714 1.00 93.79 ? 46 HOH A O 1 HETATM 239 O O . HOH B 2 . ? 10.793 26.630 15.763 1.00 112.58 ? 47 HOH A O 1 HETATM 240 O O . HOH B 2 . ? -4.005 20.595 21.313 1.00 88.33 ? 48 HOH A O 1 #