data_1QZL # _entry.id 1QZL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1QZL pdb_00001qzl 10.2210/pdb1qzl/pdb NDB UD0042 ? ? RCSB RCSB020262 ? ? WWPDB D_1000020262 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-10-21 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_symmetry' 11 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_symmetry' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QZL _pdbx_database_status.recvd_initial_deposition_date 2003-09-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1QYK 'GCATGCT + BARIUM' unspecified PDB 1QYL 'GCATGCT + Vanadium' unspecified PDB 1R2O 'GCATGCT + Ni2+' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cardin, C.J.' 1 'Gan, Y.' 2 'Thorpe, J.H.' 3 'Teixeira, S.C.M.' 4 'Gale, B.C.' 5 'Moraes, M.I.A.' 6 # _citation.id primary _citation.title 'Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT)' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cardin, C.J.' 1 ? primary 'Gan, Y.' 2 ? primary 'Thorpe, J.H.' 3 ? primary 'Teixeira, S.C.M.' 4 ? primary 'Gale, B.C.' 5 ? primary 'Moraes, M.I.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*AP*TP*GP*CP*T)-3'" 2113.410 1 ? ? ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 1 ? ? ? ? 3 water nat water 18.015 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DA)(DT)(DG)(DC)(DT)' _entity_poly.pdbx_seq_one_letter_code_can GCATGCT _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DT n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G X . n A 1 2 DC 2 2 2 DC C X . n A 1 3 DA 3 3 3 DA A X . n A 1 4 DT 4 4 4 DT T X . n A 1 5 DG 5 5 5 DG G X . n A 1 6 DC 6 6 6 DC C X . n A 1 7 DT 7 7 7 DT T X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO 1 101 101 CO CO X . C 3 HOH 1 102 102 HOH HOH X . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MOSFLM 'data reduction' . ? 2 CCP4 'data scaling' '(SCALA)' ? 3 XTALVIEW refinement . ? 4 # _cell.entry_id 1QZL _cell.length_a 24.789 _cell.length_b 24.789 _cell.length_c 91.818 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QZL _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 # _exptl.entry_id 1QZL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_percent_sol 33.74 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'sodium cacodylate, Cobalt dichloride, potassium chloride, MPD, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'sodium cacodylate' ? ? ? 1 2 1 'Cobalt dichloride' ? ? ? 1 3 1 'potassium chloride' ? ? ? 1 4 1 MPD ? ? ? 1 5 1 H2O ? ? ? 1 6 2 'sodium cacodylate' ? ? ? 1 7 2 'Cobalt dichloride' ? ? ? 1 8 2 MPD ? ? ? 1 9 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-08-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8416 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7B' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8416 # _reflns.entry_id 1QZL _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.85 _reflns.d_resolution_low 30.606 _reflns.number_all ? _reflns.number_obs 522 _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.1573 _reflns.pdbx_Rsym_value 0.1507 _reflns.pdbx_netI_over_sigmaI 4.1 _reflns.B_iso_Wilson_estimate 41.857 _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.85 _reflns_shell.d_res_low 3.00 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.288 _reflns_shell.pdbx_Rsym_value 0.288 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 69 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1QZL _refine.ls_number_reflns_obs 489 _refine.ls_number_reflns_all 522 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.57 _refine.ls_d_res_high 2.85 _refine.ls_percent_reflns_obs 98.46 _refine.ls_R_factor_obs 0.24375 _refine.ls_R_factor_all 0.24375 _refine.ls_R_factor_R_work 0.23978 _refine.ls_R_factor_R_free 0.33473 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 23 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.886 _refine.correlation_coeff_Fo_to_Fc_free 0.819 _refine.B_iso_mean 37.898 _refine.aniso_B[1][1] 1.08 _refine.aniso_B[2][2] 1.08 _refine.aniso_B[3][3] -1.62 _refine.aniso_B[1][2] 0.54 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.047 _refine.pdbx_overall_ESU_R_Free 0.525 _refine.overall_SU_ML 0.165 _refine.overall_SU_B 7.852 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 140 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 142 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 30.57 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.021 ? 156 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 69 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.909 3.000 ? 239 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.421 3.000 ? 173 'X-RAY DIFFRACTION' ? r_chiral_restr 0.141 0.200 ? 21 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 73 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 2 'X-RAY DIFFRACTION' ? r_nbd_refined 0.124 0.200 ? 11 'X-RAY DIFFRACTION' ? r_nbd_other 0.227 0.200 ? 59 'X-RAY DIFFRACTION' ? r_nbtor_other 0.115 0.200 ? 33 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.210 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.112 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.298 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.125 0.200 ? 7 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.85 _refine_ls_shell.d_res_low 2.924 _refine_ls_shell.number_reflns_R_work 27 _refine_ls_shell.R_factor_R_work 0.202 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.239 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 2 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1QZL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1QZL _struct.title 'GCATGCT + Cobalt' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QZL _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA quadruplex, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1QZL _struct_ref.pdbx_db_accession 1QZL _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1QZL _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 7 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1QZL _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 7 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 9_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.6060000000 4 'crystal symmetry operation' 12_555 x,x-y,-z+1/3 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.6060000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 N7 ? ? ? 1_555 B CO . CO ? ? X DG 1 X CO 101 1_555 ? ? ? ? ? ? ? 2.512 ? ? metalc2 metalc ? ? A DG 5 N7 ? ? ? 12_555 B CO . CO ? ? X DG 5 X CO 101 1_555 ? ? ? ? ? ? ? 2.327 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id N7 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id DG _pdbx_struct_conn_angle.ptnr1_label_seq_id 1 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id X _pdbx_struct_conn_angle.ptnr1_auth_comp_id DG _pdbx_struct_conn_angle.ptnr1_auth_seq_id 1 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id CO _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id CO _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id X _pdbx_struct_conn_angle.ptnr2_auth_comp_id CO _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id N7 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id DG _pdbx_struct_conn_angle.ptnr3_label_seq_id 5 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id X _pdbx_struct_conn_angle.ptnr3_auth_comp_id DG _pdbx_struct_conn_angle.ptnr3_auth_seq_id 5 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 12_555 _pdbx_struct_conn_angle.value 176.3 _pdbx_struct_conn_angle.value_esd ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id X _struct_site.pdbx_auth_comp_id CO _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE CO X 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DG A 1 ? DG X 1 . ? 1_555 ? 2 AC1 2 DG A 5 ? DG X 5 . ? 12_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" X DG 1 ? ? "C3'" X DG 1 ? ? 1.380 1.419 -0.039 0.006 N 2 1 C5 X DG 1 ? ? N7 X DG 1 ? ? 1.328 1.388 -0.060 0.006 N 3 1 N1 X DC 2 ? ? C6 X DC 2 ? ? 1.407 1.367 0.040 0.006 N 4 1 "O3'" X DT 4 ? ? "C3'" X DT 4 ? ? 1.373 1.419 -0.046 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C6 X DG 1 ? ? C5 X DG 1 ? ? N7 X DG 1 ? ? 125.59 130.40 -4.81 0.60 N 2 1 N1 X DG 1 ? ? C6 X DG 1 ? ? O6 X DG 1 ? ? 123.62 119.90 3.72 0.60 N 3 1 C5 X DG 1 ? ? C6 X DG 1 ? ? O6 X DG 1 ? ? 124.41 128.60 -4.19 0.60 N 4 1 "C3'" X DG 1 ? ? "O3'" X DG 1 ? ? P X DC 2 ? ? 128.43 119.70 8.73 1.20 Y 5 1 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? "C2'" X DG 5 ? ? 111.10 106.80 4.30 0.50 N 6 1 N1 X DG 5 ? ? C6 X DG 5 ? ? O6 X DG 5 ? ? 124.08 119.90 4.18 0.60 N 7 1 C5 X DG 5 ? ? C6 X DG 5 ? ? O6 X DG 5 ? ? 124.57 128.60 -4.03 0.60 N 8 1 "O5'" X DC 6 ? ? P X DC 6 ? ? OP1 X DC 6 ? ? 98.40 105.70 -7.30 0.90 N 9 1 "O4'" X DC 6 ? ? "C4'" X DC 6 ? ? "C3'" X DC 6 ? ? 109.66 106.00 3.66 0.60 N 10 1 "O4'" X DC 6 ? ? "C1'" X DC 6 ? ? N1 X DC 6 ? ? 112.74 108.30 4.44 0.30 N 11 1 N1 X DC 6 ? ? C2 X DC 6 ? ? O2 X DC 6 ? ? 115.13 118.90 -3.77 0.60 N 12 1 "C3'" X DC 6 ? ? "O3'" X DC 6 ? ? P X DT 7 ? ? 132.74 119.70 13.04 1.20 Y # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id X _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 102 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CO CO CO N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _atom_sites.entry_id 1QZL _atom_sites.fract_transf_matrix[1][1] 0.040340 _atom_sites.fract_transf_matrix[1][2] 0.023290 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.046581 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010891 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 6.964 4.659 9.137 1.00 39.26 ? 1 DG X "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 6.616 5.546 10.179 1.00 37.77 ? 1 DG X "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 6.812 4.876 11.528 1.00 39.88 ? 1 DG X "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 5.553 4.352 12.013 1.00 41.11 ? 1 DG X "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 7.721 3.674 11.573 1.00 41.76 ? 1 DG X "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 8.217 3.728 12.860 1.00 49.08 ? 1 DG X "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 6.804 2.499 11.303 1.00 39.30 ? 1 DG X "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 5.485 2.947 11.905 1.00 39.89 ? 1 DG X "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 4.275 2.614 11.121 1.00 37.58 ? 1 DG X N9 1 ATOM 10 C C8 . DG A 1 1 ? 4.215 2.561 9.774 1.00 34.80 ? 1 DG X C8 1 ATOM 11 N N7 . DG A 1 1 ? 3.046 2.271 9.338 1.00 34.95 ? 1 DG X N7 1 ATOM 12 C C5 . DG A 1 1 ? 2.292 2.122 10.421 1.00 23.91 ? 1 DG X C5 1 ATOM 13 C C6 . DG A 1 1 ? 0.936 1.807 10.427 1.00 32.67 ? 1 DG X C6 1 ATOM 14 O O6 . DG A 1 1 ? 0.252 1.591 9.394 1.00 35.06 ? 1 DG X O6 1 ATOM 15 N N1 . DG A 1 1 ? 0.414 1.736 11.743 1.00 34.81 ? 1 DG X N1 1 ATOM 16 C C2 . DG A 1 1 ? 1.218 1.935 12.892 1.00 35.52 ? 1 DG X C2 1 ATOM 17 N N2 . DG A 1 1 ? 0.597 1.833 14.087 1.00 24.70 ? 1 DG X N2 1 ATOM 18 N N3 . DG A 1 1 ? 2.539 2.270 12.867 1.00 35.81 ? 1 DG X N3 1 ATOM 19 C C4 . DG A 1 1 ? 2.993 2.344 11.565 1.00 33.17 ? 1 DG X C4 1 ATOM 20 P P . DC A 1 2 ? 9.044 2.604 13.661 1.00 52.35 ? 2 DC X P 1 ATOM 21 O OP1 . DC A 1 2 ? 9.470 3.364 14.883 1.00 49.89 ? 2 DC X OP1 1 ATOM 22 O OP2 . DC A 1 2 ? 9.954 1.840 12.760 1.00 40.39 ? 2 DC X OP2 1 ATOM 23 O "O5'" . DC A 1 2 ? 7.902 1.540 14.041 1.00 45.20 ? 2 DC X "O5'" 1 ATOM 24 C "C5'" . DC A 1 2 ? 7.484 1.379 15.356 1.00 42.63 ? 2 DC X "C5'" 1 ATOM 25 C "C4'" . DC A 1 2 ? 6.416 0.318 15.401 1.00 41.97 ? 2 DC X "C4'" 1 ATOM 26 O "O4'" . DC A 1 2 ? 5.446 0.446 14.319 1.00 40.14 ? 2 DC X "O4'" 1 ATOM 27 C "C3'" . DC A 1 2 ? 6.953 -1.078 15.279 1.00 39.94 ? 2 DC X "C3'" 1 ATOM 28 O "O3'" . DC A 1 2 ? 6.968 -1.591 16.600 1.00 46.47 ? 2 DC X "O3'" 1 ATOM 29 C "C2'" . DC A 1 2 ? 5.887 -1.772 14.419 1.00 39.73 ? 2 DC X "C2'" 1 ATOM 30 C "C1'" . DC A 1 2 ? 4.756 -0.751 14.231 1.00 31.78 ? 2 DC X "C1'" 1 ATOM 31 N N1 . DC A 1 2 ? 4.138 -0.864 12.932 1.00 30.64 ? 2 DC X N1 1 ATOM 32 C C2 . DC A 1 2 ? 2.767 -1.179 12.795 1.00 30.71 ? 2 DC X C2 1 ATOM 33 O O2 . DC A 1 2 ? 2.067 -1.314 13.781 1.00 29.81 ? 2 DC X O2 1 ATOM 34 N N3 . DC A 1 2 ? 2.238 -1.320 11.530 1.00 30.75 ? 2 DC X N3 1 ATOM 35 C C4 . DC A 1 2 ? 3.034 -1.135 10.433 1.00 26.09 ? 2 DC X C4 1 ATOM 36 N N4 . DC A 1 2 ? 2.493 -1.298 9.257 1.00 14.47 ? 2 DC X N4 1 ATOM 37 C C5 . DC A 1 2 ? 4.416 -0.810 10.539 1.00 24.33 ? 2 DC X C5 1 ATOM 38 C C6 . DC A 1 2 ? 4.936 -0.702 11.784 1.00 25.29 ? 2 DC X C6 1 ATOM 39 P P . DA A 1 3 ? 8.273 -2.218 17.300 1.00 45.53 ? 3 DA X P 1 ATOM 40 O OP1 . DA A 1 3 ? 9.446 -1.357 16.876 1.00 41.17 ? 3 DA X OP1 1 ATOM 41 O OP2 . DA A 1 3 ? 8.162 -3.708 17.054 1.00 34.53 ? 3 DA X OP2 1 ATOM 42 O "O5'" . DA A 1 3 ? 8.031 -1.885 18.862 1.00 42.55 ? 3 DA X "O5'" 1 ATOM 43 C "C5'" . DA A 1 3 ? 7.907 -0.520 19.348 1.00 35.43 ? 3 DA X "C5'" 1 ATOM 44 C "C4'" . DA A 1 3 ? 6.865 -0.453 20.470 1.00 33.33 ? 3 DA X "C4'" 1 ATOM 45 O "O4'" . DA A 1 3 ? 5.555 -0.902 20.003 1.00 33.06 ? 3 DA X "O4'" 1 ATOM 46 C "C3'" . DA A 1 3 ? 7.213 -1.324 21.665 1.00 29.36 ? 3 DA X "C3'" 1 ATOM 47 O "O3'" . DA A 1 3 ? 6.977 -0.690 22.919 1.00 29.55 ? 3 DA X "O3'" 1 ATOM 48 C "C2'" . DA A 1 3 ? 6.361 -2.539 21.352 1.00 29.78 ? 3 DA X "C2'" 1 ATOM 49 C "C1'" . DA A 1 3 ? 5.102 -1.925 20.842 1.00 31.01 ? 3 DA X "C1'" 1 ATOM 50 N N9 . DA A 1 3 ? 4.324 -2.836 20.036 1.00 37.17 ? 3 DA X N9 1 ATOM 51 C C8 . DA A 1 3 ? 4.399 -2.948 18.664 1.00 38.42 ? 3 DA X C8 1 ATOM 52 N N7 . DA A 1 3 ? 3.584 -3.875 18.173 1.00 40.99 ? 3 DA X N7 1 ATOM 53 C C5 . DA A 1 3 ? 2.961 -4.407 19.285 1.00 33.24 ? 3 DA X C5 1 ATOM 54 C C6 . DA A 1 3 ? 1.978 -5.391 19.382 1.00 35.27 ? 3 DA X C6 1 ATOM 55 N N6 . DA A 1 3 ? 1.511 -5.992 18.279 1.00 33.42 ? 3 DA X N6 1 ATOM 56 N N1 . DA A 1 3 ? 1.520 -5.714 20.637 1.00 35.56 ? 3 DA X N1 1 ATOM 57 C C2 . DA A 1 3 ? 2.047 -5.041 21.695 1.00 32.58 ? 3 DA X C2 1 ATOM 58 N N3 . DA A 1 3 ? 2.962 -4.029 21.708 1.00 32.60 ? 3 DA X N3 1 ATOM 59 C C4 . DA A 1 3 ? 3.390 -3.775 20.455 1.00 34.94 ? 3 DA X C4 1 ATOM 60 P P . DT A 1 4 ? 8.047 0.428 23.372 1.00 40.28 ? 4 DT X P 1 ATOM 61 O OP1 . DT A 1 4 ? 7.490 1.787 23.327 1.00 37.55 ? 4 DT X OP1 1 ATOM 62 O OP2 . DT A 1 4 ? 9.267 0.170 22.542 1.00 40.13 ? 4 DT X OP2 1 ATOM 63 O "O5'" . DT A 1 4 ? 8.379 0.062 24.912 1.00 41.37 ? 4 DT X "O5'" 1 ATOM 64 C "C5'" . DT A 1 4 ? 8.912 -1.261 25.239 1.00 41.13 ? 4 DT X "C5'" 1 ATOM 65 C "C4'" . DT A 1 4 ? 8.332 -1.824 26.522 1.00 39.94 ? 4 DT X "C4'" 1 ATOM 66 O "O4'" . DT A 1 4 ? 8.448 -0.801 27.518 1.00 46.09 ? 4 DT X "O4'" 1 ATOM 67 C "C3'" . DT A 1 4 ? 6.846 -2.115 26.497 1.00 39.13 ? 4 DT X "C3'" 1 ATOM 68 O "O3'" . DT A 1 4 ? 6.593 -3.213 27.282 1.00 30.05 ? 4 DT X "O3'" 1 ATOM 69 C "C2'" . DT A 1 4 ? 6.152 -0.846 27.012 1.00 37.53 ? 4 DT X "C2'" 1 ATOM 70 C "C1'" . DT A 1 4 ? 7.185 -0.384 28.012 1.00 41.19 ? 4 DT X "C1'" 1 ATOM 71 N N1 . DT A 1 4 ? 7.239 1.088 28.274 1.00 40.86 ? 4 DT X N1 1 ATOM 72 C C2 . DT A 1 4 ? 7.100 1.528 29.600 1.00 36.65 ? 4 DT X C2 1 ATOM 73 O O2 . DT A 1 4 ? 6.905 0.782 30.563 1.00 29.82 ? 4 DT X O2 1 ATOM 74 N N3 . DT A 1 4 ? 7.183 2.898 29.754 1.00 33.94 ? 4 DT X N3 1 ATOM 75 C C4 . DT A 1 4 ? 7.403 3.814 28.735 1.00 38.67 ? 4 DT X C4 1 ATOM 76 O O4 . DT A 1 4 ? 7.451 4.995 28.984 1.00 45.15 ? 4 DT X O4 1 ATOM 77 C C5 . DT A 1 4 ? 7.584 3.296 27.378 1.00 42.44 ? 4 DT X C5 1 ATOM 78 C C7 . DT A 1 4 ? 7.836 4.220 26.193 1.00 39.82 ? 4 DT X C7 1 ATOM 79 C C6 . DT A 1 4 ? 7.504 1.955 27.227 1.00 41.00 ? 4 DT X C6 1 ATOM 80 P P . DG A 1 5 ? 5.533 -4.224 26.720 1.00 37.15 ? 5 DG X P 1 ATOM 81 O OP1 . DG A 1 5 ? 5.793 -5.572 27.312 1.00 43.06 ? 5 DG X OP1 1 ATOM 82 O OP2 . DG A 1 5 ? 5.520 -4.118 25.235 1.00 44.41 ? 5 DG X OP2 1 ATOM 83 O "O5'" . DG A 1 5 ? 4.130 -3.660 27.250 1.00 39.60 ? 5 DG X "O5'" 1 ATOM 84 C "C5'" . DG A 1 5 ? 3.677 -3.907 28.624 1.00 43.33 ? 5 DG X "C5'" 1 ATOM 85 C "C4'" . DG A 1 5 ? 2.545 -2.987 29.014 1.00 43.17 ? 5 DG X "C4'" 1 ATOM 86 O "O4'" . DG A 1 5 ? 2.989 -1.601 29.036 1.00 38.91 ? 5 DG X "O4'" 1 ATOM 87 C "C3'" . DG A 1 5 ? 1.423 -3.036 27.978 1.00 45.26 ? 5 DG X "C3'" 1 ATOM 88 O "O3'" . DG A 1 5 ? 0.563 -4.222 28.158 1.00 43.08 ? 5 DG X "O3'" 1 ATOM 89 C "C2'" . DG A 1 5 ? 0.756 -1.649 28.083 1.00 41.84 ? 5 DG X "C2'" 1 ATOM 90 C "C1'" . DG A 1 5 ? 1.865 -0.806 28.717 1.00 40.93 ? 5 DG X "C1'" 1 ATOM 91 N N9 . DG A 1 5 ? 2.397 0.224 27.876 1.00 39.96 ? 5 DG X N9 1 ATOM 92 C C8 . DG A 1 5 ? 2.453 0.236 26.520 1.00 39.16 ? 5 DG X C8 1 ATOM 93 N N7 . DG A 1 5 ? 2.999 1.330 26.076 1.00 42.91 ? 5 DG X N7 1 ATOM 94 C C5 . DG A 1 5 ? 3.323 2.058 27.198 1.00 35.13 ? 5 DG X C5 1 ATOM 95 C C6 . DG A 1 5 ? 3.959 3.305 27.285 1.00 38.71 ? 5 DG X C6 1 ATOM 96 O O6 . DG A 1 5 ? 4.335 3.983 26.298 1.00 40.91 ? 5 DG X O6 1 ATOM 97 N N1 . DG A 1 5 ? 4.148 3.696 28.638 1.00 39.38 ? 5 DG X N1 1 ATOM 98 C C2 . DG A 1 5 ? 3.717 2.939 29.728 1.00 35.28 ? 5 DG X C2 1 ATOM 99 N N2 . DG A 1 5 ? 3.916 3.424 30.969 1.00 27.07 ? 5 DG X N2 1 ATOM 100 N N3 . DG A 1 5 ? 3.124 1.750 29.628 1.00 34.62 ? 5 DG X N3 1 ATOM 101 C C4 . DG A 1 5 ? 2.973 1.387 28.327 1.00 37.81 ? 5 DG X C4 1 ATOM 102 P P . DC A 1 6 ? -0.018 -4.860 26.815 1.00 39.07 ? 6 DC X P 1 ATOM 103 O OP1 . DC A 1 6 ? -0.339 -3.671 25.985 1.00 44.82 ? 6 DC X OP1 1 ATOM 104 O OP2 . DC A 1 6 ? -0.973 -5.956 27.032 1.00 38.21 ? 6 DC X OP2 1 ATOM 105 O "O5'" . DC A 1 6 ? 1.252 -5.368 26.011 1.00 45.96 ? 6 DC X "O5'" 1 ATOM 106 C "C5'" . DC A 1 6 ? 2.033 -6.449 26.405 1.00 53.54 ? 6 DC X "C5'" 1 ATOM 107 C "C4'" . DC A 1 6 ? 1.708 -7.712 25.605 1.00 53.59 ? 6 DC X "C4'" 1 ATOM 108 O "O4'" . DC A 1 6 ? 1.920 -7.418 24.207 1.00 53.89 ? 6 DC X "O4'" 1 ATOM 109 C "C3'" . DC A 1 6 ? 2.662 -8.830 26.048 1.00 54.70 ? 6 DC X "C3'" 1 ATOM 110 O "O3'" . DC A 1 6 ? 2.046 -9.972 26.822 1.00 51.23 ? 6 DC X "O3'" 1 ATOM 111 C "C2'" . DC A 1 6 ? 3.492 -9.092 24.782 1.00 53.32 ? 6 DC X "C2'" 1 ATOM 112 C "C1'" . DC A 1 6 ? 2.731 -8.437 23.641 1.00 52.52 ? 6 DC X "C1'" 1 ATOM 113 N N1 . DC A 1 6 ? 3.631 -7.915 22.475 1.00 44.96 ? 6 DC X N1 1 ATOM 114 C C2 . DC A 1 6 ? 3.427 -8.376 21.193 1.00 37.17 ? 6 DC X C2 1 ATOM 115 O O2 . DC A 1 6 ? 2.535 -9.193 21.074 1.00 39.81 ? 6 DC X O2 1 ATOM 116 N N3 . DC A 1 6 ? 4.199 -7.943 20.166 1.00 39.63 ? 6 DC X N3 1 ATOM 117 C C4 . DC A 1 6 ? 5.183 -7.039 20.379 1.00 43.34 ? 6 DC X C4 1 ATOM 118 N N4 . DC A 1 6 ? 5.961 -6.574 19.374 1.00 33.20 ? 6 DC X N4 1 ATOM 119 C C5 . DC A 1 6 ? 5.418 -6.542 21.698 1.00 44.42 ? 6 DC X C5 1 ATOM 120 C C6 . DC A 1 6 ? 4.632 -7.014 22.694 1.00 47.12 ? 6 DC X C6 1 ATOM 121 P P . DT A 1 7 ? 1.218 -11.282 26.369 0.50 46.80 ? 7 DT X P 1 ATOM 122 O OP1 . DT A 1 7 ? -0.181 -11.008 25.956 0.50 40.70 ? 7 DT X OP1 1 ATOM 123 O OP2 . DT A 1 7 ? 1.510 -12.059 27.589 0.50 43.56 ? 7 DT X OP2 1 ATOM 124 O "O5'" . DT A 1 7 ? 1.927 -12.026 25.139 0.50 50.07 ? 7 DT X "O5'" 1 ATOM 125 C "C5'" . DT A 1 7 ? 1.501 -11.749 23.779 0.50 53.63 ? 7 DT X "C5'" 1 ATOM 126 C "C4'" . DT A 1 7 ? 0.985 -12.957 23.010 0.50 53.70 ? 7 DT X "C4'" 1 ATOM 127 O "O4'" . DT A 1 7 ? 1.518 -12.862 21.671 0.50 54.15 ? 7 DT X "O4'" 1 ATOM 128 C "C3'" . DT A 1 7 ? 1.433 -14.348 23.460 0.50 54.28 ? 7 DT X "C3'" 1 ATOM 129 O "O3'" . DT A 1 7 ? 0.661 -15.407 22.870 0.50 52.46 ? 7 DT X "O3'" 1 ATOM 130 C "C2'" . DT A 1 7 ? 2.865 -14.351 22.945 0.50 54.62 ? 7 DT X "C2'" 1 ATOM 131 C "C1'" . DT A 1 7 ? 2.737 -13.595 21.616 0.50 53.18 ? 7 DT X "C1'" 1 ATOM 132 N N1 . DT A 1 7 ? 3.852 -12.624 21.276 0.50 48.65 ? 7 DT X N1 1 ATOM 133 C C2 . DT A 1 7 ? 4.099 -12.324 19.931 0.50 47.31 ? 7 DT X C2 1 ATOM 134 O O2 . DT A 1 7 ? 3.479 -12.789 18.980 0.50 46.84 ? 7 DT X O2 1 ATOM 135 N N3 . DT A 1 7 ? 5.132 -11.439 19.726 0.50 44.60 ? 7 DT X N3 1 ATOM 136 C C4 . DT A 1 7 ? 5.911 -10.838 20.684 0.50 40.24 ? 7 DT X C4 1 ATOM 137 O O4 . DT A 1 7 ? 6.786 -10.051 20.397 0.50 35.87 ? 7 DT X O4 1 ATOM 138 C C5 . DT A 1 7 ? 5.610 -11.188 22.046 0.50 42.64 ? 7 DT X C5 1 ATOM 139 C C7 . DT A 1 7 ? 6.396 -10.578 23.172 0.50 43.26 ? 7 DT X C7 1 ATOM 140 C C6 . DT A 1 7 ? 4.613 -12.049 22.282 0.50 43.90 ? 7 DT X C6 1 HETATM 141 CO CO . CO B 2 . ? 2.876 2.025 6.844 1.00 45.65 ? 101 CO X CO 1 HETATM 142 O O . HOH C 3 . ? 3.024 1.737 15.291 0.50 11.99 ? 102 HOH X O 1 #