data_1RRU # _entry.id 1RRU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RRU pdb_00001rru 10.2210/pdb1rru/pdb NDB UP0004 ? ? RCSB RCSB020994 ? ? WWPDB D_1000020994 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1PUP 'Peptide nucleic acid duplex hexamer at 1.7 A resolution' unspecified PDB 1QPY 'Crystal Structure Of a Backbone Modified Pna Hexamer' unspecified PDB 1HZS 'Crystal structure of Peptide nucleic acid containing a bicyclic analogue of Thymine' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RRU _pdbx_database_status.recvd_initial_deposition_date 2003-12-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rasmussen, H.' 1 'Liljefors, T.' 2 'Petersson, B.' 3 'Nielsen, P.E.' 4 'Kastrup, J.S.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The Influence of a Chiral Amino Acid on the Helical Handedness of PNA in Solution and in Crystals' J.Biomol.Struct.Dyn. 21 495 502 2004 JBSDD6 US 0739-1102 0646 ? 14692794 ? 1 'Crystal structure of a peptide nucleic acid (PNA) duplex at 1.7 A resolution' Nat.Struct.Biol. 4 98 101 1997 NSBIEW US 1072-8368 2024 ? ? ? 2 'Peptide nucleic acids (PNA) derived from N-(N-methylaminoethyl) glycine. Synthesis, hybridization and structural properties' 'New J.Chem.' 23 833 840 1999 ? FR 1144-0546 ? ? ? 10.1039/a902091h 3 '1,8-Naphthyridin-2(1H)-ones. Novel bi- and tricyclic analogues of Thymine in Peptide nucleic acids (PNA)' Eur.J.Org.Chem. ? 1781 1790 2001 ? GE 1434-193X ? ? ? '10.1002/1099-0690(200105)2001:9<1781::AID-EJOC1781>3.0.CO;2-K' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rasmussen, H.' 1 ? primary 'Liljefors, T.' 2 ? primary 'Petersson, B.' 3 ? primary 'Nielsen, P.E.' 4 ? primary 'Kastrup, J.S.' 5 ? 1 'Rasmussen, H.' 6 ? 1 'Kastrup, J.S.' 7 ? 1 'Nielsen, J.N.' 8 ? 1 'Nielsen, J.M.' 9 ? 1 'Nielsen, P.E.' 10 ? 2 'Haiima, G.' 11 ? 2 'Rasmussen, H.' 12 ? 2 'Schmidt, G.' 13 ? 2 'Jensen, D.K.' 14 ? 2 'Kastrup, J.S.' 15 ? 2 'Stafshede, P.W.' 16 ? 2 'Norden, B.' 17 ? 2 'Buckhardt, O.' 18 ? 2 'Nielsen, P.E.' 19 ? 3 'Eldrup, A.B.' 20 ? 3 'Nielsen, B.B.' 21 ? 3 'Haiima, G.' 22 ? 3 'Rasmussen, H.' 23 ? 3 'Kastrup, J.S.' 24 ? 3 'Christensen, C.' 25 ? 3 'Nielsen, P.E.' 26 ? # _cell.entry_id 1RRU _cell.length_a 36.75 _cell.length_b 44.07 _cell.length_c 31.22 _cell.angle_alpha 90.00 _cell.angle_beta 91.51 _cell.angle_gamma 90.00 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.entry_id 1RRU _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 5 _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Peptide Nucleic Acid, (H-P(*CPN*GPN*TPN*APN*CPN*GPN)-LYS-NH2)' 1714.813 2 ? ? ? ? 2 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name PNA # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(CPN)(GPN)(TPN)(APN)(CPN)(GPN)K(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XXXXXXKX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CPN n 1 2 GPN n 1 3 TPN n 1 4 APN n 1 5 CPN n 1 6 GPN n 1 7 LYS n 1 8 NH2 n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1RRU _struct_ref.pdbx_db_accession 1RRU _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RRU A 1 ? 8 ? 1RRU 1 ? 8 ? 1 8 2 1 1RRU B 1 ? 8 ? 1RRU 9 ? 16 ? 9 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight APN peptide-like . 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADENINE ? 'C11 H16 N7 O3 1' 294.290 CPN peptide-like . 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE ? 'C10 H16 N5 O4 1' 270.265 GPN peptide-like . 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUANINE ? 'C11 H16 N7 O4 1' 310.289 HOH non-polymer . WATER ? 'H2 O' 18.015 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 TPN peptide-like . 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE ? 'C11 H17 N4 O5 1' 285.276 # _exptl.entry_id 1RRU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 66.62 _exptl_crystal.description ? _exptl_crystal.density_Matthews 3.68 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'glycerol, magnesium formate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 glycerol ? ? ? 1 2 1 'magnesium formate' ? ? ? 1 3 1 H2O ? ? ? 1 4 2 'magnesium formate' ? ? ? 1 5 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-04-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1RRU _reflns.observed_criterion_sigma_F 0.00 _reflns.observed_criterion_sigma_I 0.00 _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 25.0 _reflns.number_all 2069 _reflns.number_obs 2069 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.4 _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.39 _reflns_shell.percent_possible_all 95.8 _reflns_shell.Rmerge_I_obs 0.316 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 92 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1RRU _refine.ls_d_res_high 2.35 _refine.ls_d_res_low 6.00 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 1955 _refine.ls_number_reflns_obs 1453 _refine.ls_number_reflns_R_free 129 _refine.ls_percent_reflns_obs 74 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.292 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 1PUP' _refine.pdbx_ls_cross_valid_method troughout _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean 38.4 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details 'Own parameter and topology file created' _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 254 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 282 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 6.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.021 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.5 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.35 _refine_ls_shell.d_res_low 2.45 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.321 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.366 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1RRU _struct.title 'The influence of a chiral amino acid on the helical handedness of PNA in solution and in crystals' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RRU _struct_keywords.pdbx_keywords 'PEPTIDE NUCLEIC ACID' _struct_keywords.text 'PNA, peptide nucleic acid, L-Lysine, helical handedness, P-form, molecular mechanics' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A CPN 1 C ? ? ? 1_555 A GPN 2 N ? ? A CPN 1 A GPN 2 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale2 covale both ? A GPN 2 C ? ? ? 1_555 A TPN 3 N ? ? A GPN 2 A TPN 3 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale3 covale both ? A TPN 3 C A ? ? 1_555 A APN 4 N B ? A TPN 3 A APN 4 1_555 ? ? ? ? ? ? ? 0.811 ? ? covale4 covale both ? A TPN 3 C B ? ? 1_555 A APN 4 N A ? A TPN 3 A APN 4 1_555 ? ? ? ? ? ? ? 1.225 ? ? covale5 covale both ? A TPN 3 C A ? ? 1_555 A APN 4 N A ? A TPN 3 A APN 4 1_555 ? ? ? ? ? ? ? 1.372 ? ? covale6 covale both ? A TPN 3 C B ? ? 1_555 A APN 4 N B ? A TPN 3 A APN 4 1_555 ? ? ? ? ? ? ? 1.363 ? ? covale7 covale both ? A APN 4 C ? ? ? 1_555 A CPN 5 N ? ? A APN 4 A CPN 5 1_555 ? ? ? ? ? ? ? 1.298 ? ? covale8 covale both ? A CPN 5 C ? ? ? 1_555 A GPN 6 N ? ? A CPN 5 A GPN 6 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale9 covale both ? A GPN 6 C ? ? ? 1_555 A LYS 7 N ? ? A GPN 6 A LYS 7 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale10 covale both ? A LYS 7 C ? ? ? 1_555 A NH2 8 N ? ? A LYS 7 A NH2 8 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale11 covale both ? B CPN 1 C ? ? ? 1_555 B GPN 2 N ? ? B CPN 9 B GPN 10 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale12 covale both ? B GPN 2 C ? ? ? 1_555 B TPN 3 N ? ? B GPN 10 B TPN 11 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale13 covale both ? B TPN 3 C A ? ? 1_555 B APN 4 N B ? B TPN 11 B APN 12 1_555 ? ? ? ? ? ? ? 0.740 ? ? covale14 covale both ? B TPN 3 C B ? ? 1_555 B APN 4 N A ? B TPN 11 B APN 12 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale15 covale both ? B TPN 3 C B ? ? 1_555 B APN 4 N B ? B TPN 11 B APN 12 1_555 ? ? ? ? ? ? ? 1.359 ? ? covale16 covale both ? B TPN 3 C A ? ? 1_555 B APN 4 N A ? B TPN 11 B APN 12 1_555 ? ? ? ? ? ? ? 1.365 ? ? covale17 covale both ? B APN 4 C ? ? ? 1_555 B CPN 5 N ? ? B APN 12 B CPN 13 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale18 covale both ? B CPN 5 C ? ? ? 1_555 B GPN 6 N ? ? B CPN 13 B GPN 14 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale19 covale both ? B GPN 6 C ? ? ? 1_555 B LYS 7 N ? ? B GPN 14 B LYS 15 1_555 ? ? ? ? ? ? ? 1.397 ? ? covale20 covale both ? B LYS 7 C ? ? ? 1_555 B NH2 8 N ? ? B LYS 15 B NH2 16 1_555 ? ? ? ? ? ? ? 1.312 ? ? hydrog1 hydrog ? ? A CPN 1 N3 ? ? ? 1_555 A GPN 6 N1 ? ? A CPN 1 A GPN 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A CPN 1 N4 ? ? ? 1_555 A GPN 6 O6 ? ? A CPN 1 A GPN 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A CPN 1 O2 ? ? ? 1_555 A GPN 6 N2 ? ? A CPN 1 A GPN 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A GPN 2 N1 ? ? ? 1_555 A CPN 5 N3 ? ? A GPN 2 A CPN 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A GPN 2 N2 ? ? ? 1_555 A CPN 5 O2 ? ? A GPN 2 A CPN 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A GPN 2 O6 ? ? ? 1_555 A CPN 5 N4 ? ? A GPN 2 A CPN 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A TPN 3 N3 ? ? ? 1_555 A APN 4 N1 ? ? A TPN 3 A APN 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A TPN 3 O4 ? ? ? 1_555 A APN 4 N6 ? ? A TPN 3 A APN 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A APN 4 N1 ? ? ? 1_555 A TPN 3 N3 ? ? A APN 4 A TPN 3 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A APN 4 N6 ? ? ? 1_555 A TPN 3 O4 ? ? A APN 4 A TPN 3 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A CPN 5 N3 ? ? ? 1_555 A GPN 2 N1 ? ? A CPN 5 A GPN 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A CPN 5 N4 ? ? ? 1_555 A GPN 2 O6 ? ? A CPN 5 A GPN 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A CPN 5 O2 ? ? ? 1_555 A GPN 2 N2 ? ? A CPN 5 A GPN 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A GPN 6 N1 ? ? ? 1_555 A CPN 1 N3 ? ? A GPN 6 A CPN 1 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A GPN 6 N2 ? ? ? 1_555 A CPN 1 O2 ? ? A GPN 6 A CPN 1 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A GPN 6 O6 ? ? ? 1_555 A CPN 1 N4 ? ? A GPN 6 A CPN 1 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B CPN 1 N3 ? ? ? 1_555 B GPN 6 N1 ? ? B CPN 9 B GPN 14 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B CPN 1 N4 ? ? ? 1_555 B GPN 6 O6 ? ? B CPN 9 B GPN 14 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B CPN 1 O2 ? ? ? 1_555 B GPN 6 N2 ? ? B CPN 9 B GPN 14 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B GPN 2 N1 ? ? ? 1_555 B CPN 5 N3 ? ? B GPN 10 B CPN 13 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B GPN 2 N2 ? ? ? 1_555 B CPN 5 O2 ? ? B GPN 10 B CPN 13 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B GPN 2 O6 ? ? ? 1_555 B CPN 5 N4 ? ? B GPN 10 B CPN 13 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B TPN 3 N3 ? ? ? 1_555 B APN 4 N1 ? ? B TPN 11 B APN 12 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B TPN 3 O4 ? ? ? 1_555 B APN 4 N6 ? ? B TPN 11 B APN 12 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B APN 4 N1 ? ? ? 1_555 B TPN 3 N3 ? ? B APN 12 B TPN 11 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B APN 4 N6 ? ? ? 1_555 B TPN 3 O4 ? ? B APN 12 B TPN 11 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B CPN 5 N3 ? ? ? 1_555 B GPN 2 N1 ? ? B CPN 13 B GPN 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B CPN 5 N4 ? ? ? 1_555 B GPN 2 O6 ? ? B CPN 13 B GPN 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B CPN 5 O2 ? ? ? 1_555 B GPN 2 N2 ? ? B CPN 13 B GPN 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B GPN 6 N1 ? ? ? 1_555 B CPN 1 N3 ? ? B GPN 14 B CPN 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B GPN 6 N2 ? ? ? 1_555 B CPN 1 O2 ? ? B GPN 14 B CPN 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B GPN 6 O6 ? ? ? 1_555 B CPN 1 N4 ? ? B GPN 14 B CPN 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NH2 8 ? 1 'BINDING SITE FOR RESIDUE NH2 A 8' AC2 Software B NH2 16 ? 2 'BINDING SITE FOR RESIDUE NH2 B 16' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 LYS A 7 ? LYS A 7 . ? 1_555 ? 2 AC2 2 GPN B 6 ? GPN B 14 . ? 2_656 ? 3 AC2 2 LYS B 7 ? LYS B 15 . ? 2_656 ? # _database_PDB_matrix.entry_id 1RRU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RRU _atom_sites.fract_transf_matrix[1][1] 0.027211 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000717 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022691 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032042 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 C "C8'" . CPN A 1 1 ? -12.534 5.434 -4.955 1.00 37.90 ? 1 CPN A "C8'" 1 HETATM 2 C "C7'" . CPN A 1 1 ? -12.678 5.082 -3.511 1.00 44.98 ? 1 CPN A "C7'" 1 HETATM 3 O "O7'" . CPN A 1 1 ? -11.683 5.062 -2.804 1.00 52.10 ? 1 CPN A "O7'" 1 HETATM 4 C "C5'" . CPN A 1 1 ? -13.783 4.591 -1.508 1.00 56.45 ? 1 CPN A "C5'" 1 HETATM 5 C C . CPN A 1 1 ? -13.868 3.127 -1.215 1.00 61.08 ? 1 CPN A C 1 HETATM 6 O O . CPN A 1 1 ? -14.273 2.723 -0.114 1.00 68.44 ? 1 CPN A O 1 HETATM 7 N "N4'" . CPN A 1 1 ? -13.822 4.848 -2.929 1.00 52.49 ? 1 CPN A "N4'" 1 HETATM 8 C "C3'" . CPN A 1 1 ? -15.189 4.994 -3.519 1.00 60.36 ? 1 CPN A "C3'" 1 HETATM 9 C "C2'" . CPN A 1 1 ? -15.593 3.982 -4.672 1.00 62.90 ? 1 CPN A "C2'" 1 HETATM 10 N N . CPN A 1 1 ? -15.876 4.588 -6.005 1.00 61.47 ? 1 CPN A N 1 HETATM 11 N N1 . CPN A 1 1 ? -11.091 5.555 -5.312 1.00 31.50 ? 1 CPN A N1 1 HETATM 12 C C2 . CPN A 1 1 ? -10.493 4.362 -5.637 1.00 26.59 ? 1 CPN A C2 1 HETATM 13 N N3 . CPN A 1 1 ? -9.189 4.386 -5.997 1.00 18.69 ? 1 CPN A N3 1 HETATM 14 C C4 . CPN A 1 1 ? -8.520 5.560 -6.018 1.00 22.35 ? 1 CPN A C4 1 HETATM 15 C C5 . CPN A 1 1 ? -9.109 6.786 -5.696 1.00 20.51 ? 1 CPN A C5 1 HETATM 16 C C6 . CPN A 1 1 ? -10.397 6.726 -5.344 1.00 26.94 ? 1 CPN A C6 1 HETATM 17 O O2 . CPN A 1 1 ? -11.185 3.341 -5.600 1.00 23.82 ? 1 CPN A O2 1 HETATM 18 N N4 . CPN A 1 1 ? -7.227 5.604 -6.329 1.00 22.35 ? 1 CPN A N4 1 HETATM 19 C "C8'" . GPN A 1 2 ? -10.111 1.801 -2.509 1.00 31.01 ? 2 GPN A "C8'" 1 HETATM 20 C "C7'" . GPN A 1 2 ? -10.413 1.563 -1.058 1.00 39.76 ? 2 GPN A "C7'" 1 HETATM 21 O "O7'" . GPN A 1 2 ? -9.716 1.958 -0.149 1.00 42.97 ? 2 GPN A "O7'" 1 HETATM 22 C "C5'" . GPN A 1 2 ? -11.593 0.339 0.630 1.00 51.22 ? 2 GPN A "C5'" 1 HETATM 23 C C . GPN A 1 2 ? -10.936 -1.046 0.948 1.00 54.09 ? 2 GPN A C 1 HETATM 24 O O . GPN A 1 2 ? -10.886 -1.429 2.135 1.00 55.96 ? 2 GPN A O 1 HETATM 25 N "N4'" . GPN A 1 2 ? -11.412 0.804 -0.746 1.00 46.64 ? 2 GPN A "N4'" 1 HETATM 26 C "C3'" . GPN A 1 2 ? -12.253 0.186 -1.766 1.00 53.41 ? 2 GPN A "C3'" 1 HETATM 27 C "C2'" . GPN A 1 2 ? -13.626 0.884 -1.928 1.00 60.07 ? 2 GPN A "C2'" 1 HETATM 28 N N . GPN A 1 2 ? -13.539 2.307 -2.198 1.00 58.66 ? 2 GPN A N 1 HETATM 29 N N9 . GPN A 1 2 ? -8.825 2.493 -2.710 1.00 31.29 ? 2 GPN A N9 1 HETATM 30 C C8 . GPN A 1 2 ? -8.567 3.829 -2.584 1.00 33.99 ? 2 GPN A C8 1 HETATM 31 N N7 . GPN A 1 2 ? -7.328 4.179 -2.841 1.00 37.09 ? 2 GPN A N7 1 HETATM 32 C C5 . GPN A 1 2 ? -6.715 3.001 -3.159 1.00 29.70 ? 2 GPN A C5 1 HETATM 33 C C6 . GPN A 1 2 ? -5.417 2.818 -3.490 1.00 31.58 ? 2 GPN A C6 1 HETATM 34 O O6 . GPN A 1 2 ? -4.560 3.668 -3.522 1.00 29.41 ? 2 GPN A O6 1 HETATM 35 N N1 . GPN A 1 2 ? -5.143 1.512 -3.736 1.00 33.22 ? 2 GPN A N1 1 HETATM 36 C C2 . GPN A 1 2 ? -6.056 0.481 -3.656 1.00 34.35 ? 2 GPN A C2 1 HETATM 37 N N2 . GPN A 1 2 ? -5.608 -0.750 -3.967 1.00 37.31 ? 2 GPN A N2 1 HETATM 38 N N3 . GPN A 1 2 ? -7.339 0.642 -3.320 1.00 32.44 ? 2 GPN A N3 1 HETATM 39 C C4 . GPN A 1 2 ? -7.590 1.952 -3.089 1.00 34.48 ? 2 GPN A C4 1 HETATM 40 C "C8'" . TPN A 1 3 ? -6.384 -1.663 -0.201 1.00 33.63 ? 3 TPN A "C8'" 1 HETATM 41 C "C7'" . TPN A 1 3 ? -6.733 -1.983 1.201 1.00 37.10 ? 3 TPN A "C7'" 1 HETATM 42 O "O7'" . TPN A 1 3 ? -6.050 -1.513 2.090 1.00 43.10 ? 3 TPN A "O7'" 1 HETATM 43 C "C5'" A TPN A 1 3 ? -7.859 -3.572 2.652 0.50 35.87 ? 3 TPN A "C5'" 1 HETATM 44 C "C5'" B TPN A 1 3 ? -8.078 -3.339 2.745 0.50 43.24 ? 3 TPN A "C5'" 1 HETATM 45 C C A TPN A 1 3 ? -6.737 -4.667 2.735 0.50 32.31 ? 3 TPN A C 1 HETATM 46 C C B TPN A 1 3 ? -6.999 -4.067 3.631 0.50 47.24 ? 3 TPN A C 1 HETATM 47 O O A TPN A 1 3 ? -6.264 -5.185 1.694 0.50 27.48 ? 3 TPN A O 1 HETATM 48 O O B TPN A 1 3 ? -6.814 -3.670 4.799 0.50 50.39 ? 3 TPN A O 1 HETATM 49 N "N4'" . TPN A 1 3 ? -7.711 -2.847 1.403 1.00 39.47 ? 3 TPN A "N4'" 1 HETATM 50 C "C3'" . TPN A 1 3 ? -8.474 -3.404 0.283 1.00 41.92 ? 3 TPN A "C3'" 1 HETATM 51 C "C2'" . TPN A 1 3 ? -9.957 -3.153 0.375 1.00 44.15 ? 3 TPN A "C2'" 1 HETATM 52 N N . TPN A 1 3 ? -10.405 -1.838 -0.019 1.00 47.28 ? 3 TPN A N 1 HETATM 53 N N1 . TPN A 1 3 ? -5.403 -0.572 -0.325 1.00 32.25 ? 3 TPN A N1 1 HETATM 54 C C6 . TPN A 1 3 ? -5.681 0.740 -0.058 1.00 33.32 ? 3 TPN A C6 1 HETATM 55 C C2 . TPN A 1 3 ? -4.145 -0.938 -0.824 1.00 33.67 ? 3 TPN A C2 1 HETATM 56 O O2 . TPN A 1 3 ? -3.852 -2.103 -1.086 1.00 41.32 ? 3 TPN A O2 1 HETATM 57 N N3 . TPN A 1 3 ? -3.222 0.069 -1.026 1.00 32.36 ? 3 TPN A N3 1 HETATM 58 C C4 . TPN A 1 3 ? -3.436 1.393 -0.774 1.00 32.45 ? 3 TPN A C4 1 HETATM 59 O O4 . TPN A 1 3 ? -2.548 2.194 -0.948 1.00 32.49 ? 3 TPN A O4 1 HETATM 60 C C5 . TPN A 1 3 ? -4.743 1.690 -0.269 1.00 33.60 ? 3 TPN A C5 1 HETATM 61 C C5M . TPN A 1 3 ? -5.095 3.115 0.034 1.00 36.11 ? 3 TPN A C5M 1 HETATM 62 C "C8'" . APN A 1 4 ? -3.196 -3.059 2.788 1.00 32.58 ? 4 APN A "C8'" 1 HETATM 63 C "C7'" . APN A 1 4 ? -3.090 -3.432 4.283 1.00 40.19 ? 4 APN A "C7'" 1 HETATM 64 O "O7'" . APN A 1 4 ? -2.737 -2.541 5.087 1.00 45.52 ? 4 APN A "O7'" 1 HETATM 65 C "C5'" . APN A 1 4 ? -3.305 -5.078 6.122 1.00 28.61 ? 4 APN A "C5'" 1 HETATM 66 C C . APN A 1 4 ? -1.918 -5.610 6.451 1.00 21.28 ? 4 APN A C 1 HETATM 67 O O . APN A 1 4 ? -1.485 -5.638 7.589 1.00 26.57 ? 4 APN A O 1 HETATM 68 N "N4'" . APN A 1 4 ? -3.400 -4.683 4.718 1.00 32.60 ? 4 APN A "N4'" 1 HETATM 69 C "C3'" A APN A 1 4 ? -3.849 -5.753 3.834 0.50 29.27 ? 4 APN A "C3'" 1 HETATM 70 C "C3'" B APN A 1 4 ? -3.837 -5.746 3.815 0.50 35.13 ? 4 APN A "C3'" 1 HETATM 71 C "C2'" A APN A 1 4 ? -5.287 -6.042 4.262 0.50 26.29 ? 4 APN A "C2'" 1 HETATM 72 C "C2'" B APN A 1 4 ? -5.335 -5.891 4.069 0.50 38.57 ? 4 APN A "C2'" 1 HETATM 73 N N A APN A 1 4 ? -6.242 -4.964 3.980 0.50 31.66 ? 4 APN A N 1 HETATM 74 N N B APN A 1 4 ? -6.221 -5.096 3.190 0.50 46.40 ? 4 APN A N 1 HETATM 75 N N9 . APN A 1 4 ? -2.702 -1.744 2.632 1.00 26.25 ? 4 APN A N9 1 HETATM 76 C C8 . APN A 1 4 ? -3.291 -0.522 2.862 1.00 22.89 ? 4 APN A C8 1 HETATM 77 N N7 . APN A 1 4 ? -2.465 0.477 2.575 1.00 26.77 ? 4 APN A N7 1 HETATM 78 C C5 . APN A 1 4 ? -1.325 -0.158 2.145 1.00 27.04 ? 4 APN A C5 1 HETATM 79 C C6 . APN A 1 4 ? -0.100 0.291 1.693 1.00 33.55 ? 4 APN A C6 1 HETATM 80 N N6 . APN A 1 4 ? 0.162 1.566 1.566 1.00 36.67 ? 4 APN A N6 1 HETATM 81 N N1 . APN A 1 4 ? 0.849 -0.601 1.342 1.00 34.49 ? 4 APN A N1 1 HETATM 82 C C2 . APN A 1 4 ? 0.532 -1.875 1.447 1.00 33.75 ? 4 APN A C2 1 HETATM 83 N N3 . APN A 1 4 ? -0.616 -2.412 1.865 1.00 33.13 ? 4 APN A N3 1 HETATM 84 C C4 . APN A 1 4 ? -1.490 -1.495 2.195 1.00 26.65 ? 4 APN A C4 1 HETATM 85 C "C8'" . CPN A 1 5 ? 1.059 -2.930 4.995 1.00 40.55 ? 5 CPN A "C8'" 1 HETATM 86 C "C7'" . CPN A 1 5 ? 1.601 -3.524 6.318 1.00 40.44 ? 5 CPN A "C7'" 1 HETATM 87 O "O7'" . CPN A 1 5 ? 2.129 -2.807 7.161 1.00 42.16 ? 5 CPN A "O7'" 1 HETATM 88 C "C5'" . CPN A 1 5 ? 1.746 -5.313 7.927 1.00 31.49 ? 5 CPN A "C5'" 1 HETATM 89 C C . CPN A 1 5 ? 3.173 -5.682 8.193 1.00 29.67 ? 5 CPN A C 1 HETATM 90 O O . CPN A 1 5 ? 3.496 -6.038 9.323 1.00 32.98 ? 5 CPN A O 1 HETATM 91 N "N4'" . CPN A 1 5 ? 1.538 -4.822 6.590 1.00 36.45 ? 5 CPN A "N4'" 1 HETATM 92 C "C3'" . CPN A 1 5 ? 1.371 -5.839 5.544 1.00 34.20 ? 5 CPN A "C3'" 1 HETATM 93 C "C2'" . CPN A 1 5 ? 0.125 -6.597 5.847 1.00 26.08 ? 5 CPN A "C2'" 1 HETATM 94 N N . CPN A 1 5 ? -1.094 -5.912 5.494 1.00 19.59 ? 5 CPN A N 1 HETATM 95 N N1 . CPN A 1 5 ? 1.338 -1.488 4.839 1.00 37.80 ? 5 CPN A N1 1 HETATM 96 C C2 . CPN A 1 5 ? 2.590 -1.189 4.365 1.00 38.04 ? 5 CPN A C2 1 HETATM 97 N N3 . CPN A 1 5 ? 2.930 0.099 4.218 1.00 38.66 ? 5 CPN A N3 1 HETATM 98 C C4 . CPN A 1 5 ? 2.114 1.089 4.513 1.00 37.82 ? 5 CPN A C4 1 HETATM 99 C C5 . CPN A 1 5 ? 0.813 0.797 5.014 1.00 36.31 ? 5 CPN A C5 1 HETATM 100 C C6 . CPN A 1 5 ? 0.462 -0.497 5.156 1.00 38.93 ? 5 CPN A C6 1 HETATM 101 O O2 . CPN A 1 5 ? 3.408 -2.070 4.113 1.00 37.64 ? 5 CPN A O2 1 HETATM 102 N N4 . CPN A 1 5 ? 2.547 2.339 4.316 1.00 35.26 ? 5 CPN A N4 1 HETATM 103 C "C8'" . GPN A 1 6 ? 5.483 -1.996 7.250 1.00 35.56 ? 6 GPN A "C8'" 1 HETATM 104 C "C7'" . GPN A 1 6 ? 5.522 -2.592 8.668 1.00 38.94 ? 6 GPN A "C7'" 1 HETATM 105 O "O7'" . GPN A 1 6 ? 5.072 -1.950 9.630 1.00 38.84 ? 6 GPN A "O7'" 1 HETATM 106 C "C5'" . GPN A 1 6 ? 6.220 -4.350 10.176 0.50 37.68 ? 6 GPN A "C5'" 1 HETATM 107 C C . GPN A 1 6 ? 7.539 -3.784 10.694 0.50 41.03 ? 6 GPN A C 1 HETATM 108 O O . GPN A 1 6 ? 8.461 -3.627 9.900 0.50 31.19 ? 6 GPN A O 1 HETATM 109 N "N4'" . GPN A 1 6 ? 6.017 -3.822 8.851 1.00 35.82 ? 6 GPN A "N4'" 1 HETATM 110 C "C3'" . GPN A 1 6 ? 6.417 -4.662 7.718 1.00 37.74 ? 6 GPN A "C3'" 1 HETATM 111 C "C2'" . GPN A 1 6 ? 5.406 -5.904 7.385 1.00 33.41 ? 6 GPN A "C2'" 1 HETATM 112 N N . GPN A 1 6 ? 4.015 -5.605 7.179 1.00 27.75 ? 6 GPN A N 1 HETATM 113 N N9 . GPN A 1 6 ? 5.143 -0.581 7.297 1.00 32.79 ? 6 GPN A N9 1 HETATM 114 C C8 . GPN A 1 6 ? 3.930 -0.039 7.543 1.00 37.08 ? 6 GPN A C8 1 HETATM 115 N N7 . GPN A 1 6 ? 3.874 1.256 7.470 1.00 40.40 ? 6 GPN A N7 1 HETATM 116 C C5 . GPN A 1 6 ? 5.205 1.575 7.150 1.00 39.14 ? 6 GPN A C5 1 HETATM 117 C C6 . GPN A 1 6 ? 5.804 2.845 6.925 1.00 40.85 ? 6 GPN A C6 1 HETATM 118 O O6 . GPN A 1 6 ? 5.218 3.929 6.994 1.00 44.52 ? 6 GPN A O6 1 HETATM 119 N N1 . GPN A 1 6 ? 7.177 2.764 6.632 1.00 37.83 ? 6 GPN A N1 1 HETATM 120 C C2 . GPN A 1 6 ? 7.860 1.588 6.571 1.00 36.00 ? 6 GPN A C2 1 HETATM 121 N N2 . GPN A 1 6 ? 9.149 1.655 6.290 1.00 30.89 ? 6 GPN A N2 1 HETATM 122 N N3 . GPN A 1 6 ? 7.278 0.411 6.779 1.00 34.21 ? 6 GPN A N3 1 HETATM 123 C C4 . GPN A 1 6 ? 5.971 0.461 7.057 1.00 32.41 ? 6 GPN A C4 1 ATOM 124 N N . LYS A 1 7 ? 7.533 -3.332 11.967 1.00 50.29 ? 7 LYS A N 1 ATOM 125 C CA . LYS A 1 7 ? 8.648 -3.008 12.899 1.00 62.19 ? 7 LYS A CA 1 ATOM 126 C C . LYS A 1 7 ? 8.581 -1.769 13.794 1.00 65.82 ? 7 LYS A C 1 ATOM 127 O O . LYS A 1 7 ? 9.572 -1.046 14.039 1.00 70.13 ? 7 LYS A O 1 ATOM 128 C CB . LYS A 1 7 ? 10.016 -2.919 12.201 1.00 63.82 ? 7 LYS A CB 1 ATOM 129 C CG . LYS A 1 7 ? 10.601 -4.307 12.079 1.00 63.27 ? 7 LYS A CG 1 ATOM 130 C CD . LYS A 1 7 ? 11.659 -4.312 10.969 1.00 69.26 ? 7 LYS A CD 1 ATOM 131 C CE . LYS A 1 7 ? 12.168 -5.746 10.686 1.00 72.61 ? 7 LYS A CE 1 ATOM 132 N NZ . LYS A 1 7 ? 13.462 -5.776 10.007 1.00 70.68 ? 7 LYS A NZ 1 HETATM 133 N N . NH2 A 1 8 ? 7.369 -1.585 14.350 1.00 63.89 ? 8 NH2 A N 1 HETATM 134 C "C8'" . CPN B 1 1 ? 6.104 1.524 10.548 1.00 45.76 ? 9 CPN B "C8'" 1 HETATM 135 C "C7'" . CPN B 1 1 ? 5.648 1.938 11.916 1.00 54.29 ? 9 CPN B "C7'" 1 HETATM 136 O "O7'" . CPN B 1 1 ? 6.370 1.921 12.912 1.00 55.76 ? 9 CPN B "O7'" 1 HETATM 137 C "C5'" . CPN B 1 1 ? 3.778 2.627 13.232 1.00 61.77 ? 9 CPN B "C5'" 1 HETATM 138 C C . CPN B 1 1 ? 3.794 4.104 13.537 1.00 62.81 ? 9 CPN B C 1 HETATM 139 O O . CPN B 1 1 ? 2.938 4.849 13.034 1.00 66.80 ? 9 CPN B O 1 HETATM 140 N "N4'" . CPN B 1 1 ? 4.379 2.300 11.967 1.00 60.06 ? 9 CPN B "N4'" 1 HETATM 141 C "C3'" . CPN B 1 1 ? 3.471 2.350 10.796 1.00 66.67 ? 9 CPN B "C3'" 1 HETATM 142 C "C2'" . CPN B 1 1 ? 3.475 3.774 10.090 1.00 73.27 ? 9 CPN B "C2'" 1 HETATM 143 N N . CPN B 1 1 ? 4.799 4.364 9.827 1.00 70.44 ? 9 CPN B N 1 HETATM 144 N N1 . CPN B 1 1 ? 7.499 1.432 10.304 1.00 37.55 ? 9 CPN B N1 1 HETATM 145 C C2 . CPN B 1 1 ? 8.149 2.538 9.786 1.00 36.57 ? 9 CPN B C2 1 HETATM 146 N N3 . CPN B 1 1 ? 9.418 2.382 9.433 1.00 37.37 ? 9 CPN B N3 1 HETATM 147 C C4 . CPN B 1 1 ? 10.025 1.199 9.578 1.00 40.26 ? 9 CPN B C4 1 HETATM 148 C C5 . CPN B 1 1 ? 9.363 0.097 10.097 1.00 40.22 ? 9 CPN B C5 1 HETATM 149 C C6 . CPN B 1 1 ? 8.094 0.278 10.446 1.00 40.10 ? 9 CPN B C6 1 HETATM 150 O O2 . CPN B 1 1 ? 7.612 3.633 9.636 1.00 32.69 ? 9 CPN B O2 1 HETATM 151 N N4 . CPN B 1 1 ? 11.312 0.986 9.276 1.00 46.42 ? 9 CPN B N4 1 HETATM 152 C "C8'" . GPN B 1 2 ? 7.943 5.198 13.186 1.00 35.49 ? 10 GPN B "C8'" 1 HETATM 153 C "C7'" . GPN B 1 2 ? 7.979 6.002 14.473 1.00 41.34 ? 10 GPN B "C7'" 1 HETATM 154 O "O7'" . GPN B 1 2 ? 8.957 5.940 15.198 1.00 45.74 ? 10 GPN B "O7'" 1 HETATM 155 C "C5'" . GPN B 1 2 ? 6.950 7.437 16.177 1.00 50.02 ? 10 GPN B "C5'" 1 HETATM 156 C C . GPN B 1 2 ? 7.219 8.956 16.324 1.00 50.50 ? 10 GPN B C 1 HETATM 157 O O . GPN B 1 2 ? 6.904 9.569 17.372 1.00 49.28 ? 10 GPN B O 1 HETATM 158 N "N4'" . GPN B 1 2 ? 6.984 6.763 14.877 1.00 45.77 ? 10 GPN B "N4'" 1 HETATM 159 C "C3'" . GPN B 1 2 ? 5.759 6.932 14.142 1.00 53.84 ? 10 GPN B "C3'" 1 HETATM 160 C "C2'" . GPN B 1 2 ? 4.730 5.944 14.793 1.00 61.13 ? 10 GPN B "C2'" 1 HETATM 161 N N . GPN B 1 2 ? 4.767 4.538 14.344 1.00 61.86 ? 10 GPN B N 1 HETATM 162 N N9 . GPN B 1 2 ? 9.297 4.711 12.871 1.00 31.28 ? 10 GPN B N9 1 HETATM 163 C C8 . GPN B 1 2 ? 9.853 3.446 12.775 1.00 33.40 ? 10 GPN B C8 1 HETATM 164 N N7 . GPN B 1 2 ? 11.162 3.420 12.451 1.00 31.59 ? 10 GPN B N7 1 HETATM 165 C C5 . GPN B 1 2 ? 11.479 4.755 12.335 1.00 25.96 ? 10 GPN B C5 1 HETATM 166 C C6 . GPN B 1 2 ? 12.681 5.329 12.020 1.00 28.82 ? 10 GPN B C6 1 HETATM 167 O O6 . GPN B 1 2 ? 13.772 4.822 11.818 1.00 19.27 ? 10 GPN B O6 1 HETATM 168 N N1 . GPN B 1 2 ? 12.557 6.691 12.001 1.00 32.91 ? 10 GPN B N1 1 HETATM 169 C C2 . GPN B 1 2 ? 11.415 7.450 12.259 1.00 33.29 ? 10 GPN B C2 1 HETATM 170 N N2 . GPN B 1 2 ? 11.484 8.793 12.156 1.00 33.35 ? 10 GPN B N2 1 HETATM 171 N N3 . GPN B 1 2 ? 10.246 6.921 12.580 1.00 29.74 ? 10 GPN B N3 1 HETATM 172 C C4 . GPN B 1 2 ? 10.375 5.558 12.587 1.00 33.90 ? 10 GPN B C4 1 HETATM 173 C "C8'" . TPN B 1 3 ? 11.318 8.849 15.340 1.00 26.55 ? 11 TPN B "C8'" 1 HETATM 174 C "C7'" . TPN B 1 3 ? 10.918 9.347 16.672 1.00 28.81 ? 11 TPN B "C7'" 1 HETATM 175 O "O7'" . TPN B 1 3 ? 11.250 8.755 17.654 1.00 35.74 ? 11 TPN B "O7'" 1 HETATM 176 C "C5'" A TPN B 1 3 ? 10.064 11.178 18.020 0.50 25.95 ? 11 TPN B "C5'" 1 HETATM 177 C "C5'" B TPN B 1 3 ? 9.700 10.930 18.071 0.50 34.72 ? 11 TPN B "C5'" 1 HETATM 178 C C A TPN B 1 3 ? 11.276 12.160 18.179 0.50 22.99 ? 11 TPN B C 1 HETATM 179 C C B TPN B 1 3 ? 10.711 11.493 19.094 0.50 41.19 ? 11 TPN B C 1 HETATM 180 O O A TPN B 1 3 ? 11.978 12.567 17.215 0.50 11.27 ? 11 TPN B O 1 HETATM 181 O O B TPN B 1 3 ? 10.716 11.011 20.247 0.50 43.50 ? 11 TPN B O 1 HETATM 182 N "N4'" . TPN B 1 3 ? 10.197 10.445 16.774 1.00 32.90 ? 11 TPN B "N4'" 1 HETATM 183 C "C3'" . TPN B 1 3 ? 9.700 11.195 15.600 1.00 35.04 ? 11 TPN B "C3'" 1 HETATM 184 C "C2'" . TPN B 1 3 ? 8.164 11.030 15.507 1.00 41.71 ? 11 TPN B "C2'" 1 HETATM 185 N N . TPN B 1 3 ? 7.778 9.621 15.307 1.00 47.96 ? 11 TPN B N 1 HETATM 186 N N1 . TPN B 1 3 ? 12.269 7.755 15.249 1.00 24.80 ? 11 TPN B N1 1 HETATM 187 C C6 . TPN B 1 3 ? 11.970 6.468 15.581 1.00 25.21 ? 11 TPN B C6 1 HETATM 188 C C2 . TPN B 1 3 ? 13.588 8.052 14.758 1.00 29.63 ? 11 TPN B C2 1 HETATM 189 O O2 . TPN B 1 3 ? 14.024 9.145 14.432 1.00 34.19 ? 11 TPN B O2 1 HETATM 190 N N3 . TPN B 1 3 ? 14.496 7.027 14.643 1.00 26.93 ? 11 TPN B N3 1 HETATM 191 C C4 . TPN B 1 3 ? 14.228 5.748 14.973 1.00 19.97 ? 11 TPN B C4 1 HETATM 192 O O4 . TPN B 1 3 ? 15.121 4.966 14.837 1.00 23.29 ? 11 TPN B O4 1 HETATM 193 C C5 . TPN B 1 3 ? 12.900 5.511 15.451 1.00 22.33 ? 11 TPN B C5 1 HETATM 194 C C5M . TPN B 1 3 ? 12.466 4.177 15.823 1.00 23.35 ? 11 TPN B C5M 1 HETATM 195 C "C8'" . APN B 1 4 ? 14.948 10.465 18.329 1.00 27.06 ? 12 APN B "C8'" 1 HETATM 196 C "C7'" . APN B 1 4 ? 15.016 10.887 19.796 1.00 33.66 ? 12 APN B "C7'" 1 HETATM 197 O "O7'" . APN B 1 4 ? 15.554 10.125 20.574 1.00 33.53 ? 12 APN B "O7'" 1 HETATM 198 C "C5'" . APN B 1 4 ? 14.779 12.427 21.721 1.00 32.25 ? 12 APN B "C5'" 1 HETATM 199 C C . APN B 1 4 ? 16.143 13.140 21.877 1.00 23.47 ? 12 APN B C 1 HETATM 200 O O . APN B 1 4 ? 16.442 13.550 22.967 1.00 28.29 ? 12 APN B O 1 HETATM 201 N "N4'" . APN B 1 4 ? 14.542 12.041 20.304 1.00 32.74 ? 12 APN B "N4'" 1 HETATM 202 C "C3'" A APN B 1 4 ? 13.947 13.088 19.478 0.50 28.84 ? 12 APN B "C3'" 1 HETATM 203 C "C3'" B APN B 1 4 ? 13.915 13.063 19.461 0.50 33.65 ? 12 APN B "C3'" 1 HETATM 204 C "C2'" A APN B 1 4 ? 12.547 13.351 19.996 0.50 24.08 ? 12 APN B "C2'" 1 HETATM 205 C "C2'" B APN B 1 4 ? 12.440 13.086 19.802 0.50 35.64 ? 12 APN B "C2'" 1 HETATM 206 N N A APN B 1 4 ? 11.537 12.435 19.490 0.50 25.93 ? 12 APN B N 1 HETATM 207 N N B APN B 1 4 ? 11.581 12.485 18.770 0.50 40.66 ? 12 APN B N 1 HETATM 208 N N9 . APN B 1 4 ? 15.439 9.126 18.121 1.00 17.87 ? 12 APN B N9 1 HETATM 209 C C8 . APN B 1 4 ? 14.825 7.884 18.272 1.00 10.05 ? 12 APN B C8 1 HETATM 210 N N7 . APN B 1 4 ? 15.715 6.917 17.952 1.00 16.15 ? 12 APN B N7 1 HETATM 211 C C5 . APN B 1 4 ? 16.866 7.561 17.606 1.00 16.81 ? 12 APN B C5 1 HETATM 212 C C6 . APN B 1 4 ? 18.122 7.149 17.208 1.00 28.35 ? 12 APN B C6 1 HETATM 213 N N6 . APN B 1 4 ? 18.399 5.853 17.107 1.00 31.45 ? 12 APN B N6 1 HETATM 214 N N1 . APN B 1 4 ? 19.102 8.064 16.947 1.00 26.60 ? 12 APN B N1 1 HETATM 215 C C2 . APN B 1 4 ? 18.739 9.287 17.101 1.00 24.34 ? 12 APN B C2 1 HETATM 216 N N3 . APN B 1 4 ? 17.587 9.772 17.483 1.00 18.28 ? 12 APN B N3 1 HETATM 217 C C4 . APN B 1 4 ? 16.702 8.883 17.722 1.00 16.77 ? 12 APN B C4 1 HETATM 218 C "C8'" . CPN B 1 5 ? 19.674 10.613 20.386 1.00 29.41 ? 13 CPN B "C8'" 1 HETATM 219 C "C7'" . CPN B 1 5 ? 19.465 11.097 21.861 1.00 32.78 ? 13 CPN B "C7'" 1 HETATM 220 O "O7'" . CPN B 1 5 ? 19.191 10.357 22.810 1.00 34.54 ? 13 CPN B "O7'" 1 HETATM 221 C "C5'" . CPN B 1 5 ? 19.735 12.908 23.492 1.00 26.71 ? 13 CPN B "C5'" 1 HETATM 222 C C . CPN B 1 5 ? 21.183 13.267 23.860 1.00 21.84 ? 13 CPN B C 1 HETATM 223 O O . CPN B 1 5 ? 21.463 13.547 25.009 1.00 19.08 ? 13 CPN B O 1 HETATM 224 N "N4'" . CPN B 1 5 ? 19.573 12.400 22.114 1.00 32.14 ? 13 CPN B "N4'" 1 HETATM 225 C "C3'" . CPN B 1 5 ? 19.581 13.377 21.002 1.00 31.22 ? 13 CPN B "C3'" 1 HETATM 226 C "C2'" . CPN B 1 5 ? 18.221 14.105 21.092 1.00 21.49 ? 13 CPN B "C2'" 1 HETATM 227 N N . CPN B 1 5 ? 17.044 13.297 20.925 1.00 21.86 ? 13 CPN B N 1 HETATM 228 N N1 . CPN B 1 5 ? 19.594 9.179 20.219 1.00 16.78 ? 13 CPN B N1 1 HETATM 229 C C2 . CPN B 1 5 ? 20.735 8.538 19.884 1.00 23.15 ? 13 CPN B C2 1 HETATM 230 N N3 . CPN B 1 5 ? 20.769 7.208 19.929 1.00 24.89 ? 13 CPN B N3 1 HETATM 231 C C4 . CPN B 1 5 ? 19.716 6.500 20.308 1.00 22.93 ? 13 CPN B C4 1 HETATM 232 C C5 . CPN B 1 5 ? 18.512 7.148 20.667 1.00 23.16 ? 13 CPN B C5 1 HETATM 233 C C6 . CPN B 1 5 ? 18.509 8.491 20.599 1.00 23.03 ? 13 CPN B C6 1 HETATM 234 O O2 . CPN B 1 5 ? 21.785 9.090 19.608 1.00 23.13 ? 13 CPN B O2 1 HETATM 235 N N4 . CPN B 1 5 ? 19.788 5.172 20.319 1.00 24.86 ? 13 CPN B N4 1 HETATM 236 C "C8'" . GPN B 1 6 ? 23.467 9.794 22.767 1.00 24.78 ? 14 GPN B "C8'" 1 HETATM 237 C "C7'" . GPN B 1 6 ? 23.517 10.249 24.271 1.00 37.20 ? 14 GPN B "C7'" 1 HETATM 238 O "O7'" . GPN B 1 6 ? 22.988 9.513 25.142 1.00 37.64 ? 14 GPN B "O7'" 1 HETATM 239 C "C5'" . GPN B 1 6 ? 24.430 11.665 26.094 0.50 43.33 ? 14 GPN B "C5'" 1 HETATM 240 C C . GPN B 1 6 ? 25.832 11.463 26.734 0.50 51.40 ? 14 GPN B C 1 HETATM 241 O O . GPN B 1 6 ? 26.800 11.156 25.999 0.50 47.63 ? 14 GPN B O 1 HETATM 242 N "N4'" . GPN B 1 6 ? 24.137 11.390 24.657 1.00 37.24 ? 14 GPN B "N4'" 1 HETATM 243 C "C3'" . GPN B 1 6 ? 24.510 12.353 23.624 1.00 31.75 ? 14 GPN B "C3'" 1 HETATM 244 C "C2'" . GPN B 1 6 ? 23.475 13.577 23.376 1.00 20.80 ? 14 GPN B "C2'" 1 HETATM 245 N N . GPN B 1 6 ? 22.154 13.284 22.970 1.00 15.61 ? 14 GPN B N 1 HETATM 246 N N9 . GPN B 1 6 ? 23.142 8.358 22.858 1.00 19.14 ? 14 GPN B N9 1 HETATM 247 C C8 . GPN B 1 6 ? 21.973 7.775 23.190 1.00 16.65 ? 14 GPN B C8 1 HETATM 248 N N7 . GPN B 1 6 ? 21.990 6.483 23.169 1.00 16.98 ? 14 GPN B N7 1 HETATM 249 C C5 . GPN B 1 6 ? 23.313 6.212 22.793 1.00 13.56 ? 14 GPN B C5 1 HETATM 250 C C6 . GPN B 1 6 ? 24.003 4.997 22.583 1.00 14.38 ? 14 GPN B C6 1 HETATM 251 O O6 . GPN B 1 6 ? 23.543 3.887 22.676 1.00 21.53 ? 14 GPN B O6 1 HETATM 252 N N1 . GPN B 1 6 ? 25.317 5.105 22.233 1.00 13.59 ? 14 GPN B N1 1 HETATM 253 C C2 . GPN B 1 6 ? 25.944 6.327 22.103 1.00 14.51 ? 14 GPN B C2 1 HETATM 254 N N2 . GPN B 1 6 ? 27.248 6.420 21.778 1.00 10.85 ? 14 GPN B N2 1 HETATM 255 N N3 . GPN B 1 6 ? 25.270 7.474 22.284 1.00 18.86 ? 14 GPN B N3 1 HETATM 256 C C4 . GPN B 1 6 ? 23.984 7.353 22.622 1.00 13.36 ? 14 GPN B C4 1 ATOM 257 N N . LYS B 1 7 ? 25.887 11.625 28.120 1.00 65.90 ? 15 LYS B N 1 ATOM 258 C CA . LYS B 1 7 ? 27.082 11.657 29.065 1.00 74.82 ? 15 LYS B CA 1 ATOM 259 C C . LYS B 1 7 ? 28.105 10.559 28.898 1.00 78.49 ? 15 LYS B C 1 ATOM 260 O O . LYS B 1 7 ? 28.308 9.768 29.809 1.00 84.26 ? 15 LYS B O 1 ATOM 261 C CB . LYS B 1 7 ? 26.721 11.590 30.599 1.00 75.49 ? 15 LYS B CB 1 ATOM 262 C CG . LYS B 1 7 ? 25.822 12.722 31.242 1.00 79.16 ? 15 LYS B CG 1 ATOM 263 C CD . LYS B 1 7 ? 24.618 11.972 31.759 1.00 78.68 ? 15 LYS B CD 1 ATOM 264 C CE . LYS B 1 7 ? 23.365 12.790 31.823 1.00 77.79 ? 15 LYS B CE 1 ATOM 265 N NZ . LYS B 1 7 ? 22.667 12.129 32.890 1.00 80.44 ? 15 LYS B NZ 1 HETATM 266 N N . NH2 B 1 8 ? 28.757 10.335 27.782 1.00 81.37 ? 16 NH2 B N 1 HETATM 267 O O . HOH C 2 . ? -2.575 -5.123 9.819 1.00 26.46 ? 17 HOH A O 1 HETATM 268 O O . HOH C 2 . ? 8.940 -2.310 7.500 1.00 72.08 ? 20 HOH A O 1 HETATM 269 O O . HOH C 2 . ? -4.935 -5.989 10.170 1.00 44.44 ? 21 HOH A O 1 HETATM 270 O O . HOH C 2 . ? 2.002 -6.061 0.061 1.00 59.17 ? 22 HOH A O 1 HETATM 271 O O . HOH C 2 . ? -8.177 -3.951 -4.358 1.00 70.01 ? 23 HOH A O 1 HETATM 272 O O . HOH C 2 . ? -9.737 5.255 0.014 1.00 52.24 ? 25 HOH A O 1 HETATM 273 O O . HOH C 2 . ? -3.331 -0.576 7.112 1.00 50.85 ? 27 HOH A O 1 HETATM 274 O O . HOH C 2 . ? -13.610 1.634 -5.355 1.00 36.52 ? 28 HOH A O 1 HETATM 275 O O . HOH C 2 . ? -1.541 -4.887 3.494 1.00 10.88 ? 29 HOH A O 1 HETATM 276 O O . HOH C 2 . ? 3.949 -3.928 5.360 1.00 61.55 ? 30 HOH A O 1 HETATM 277 O O . HOH C 2 . ? 2.308 -5.405 11.440 1.00 16.75 ? 33 HOH A O 1 HETATM 278 O O . HOH C 2 . ? 11.514 0.768 13.657 1.00 26.01 ? 36 HOH A O 1 HETATM 279 O O . HOH C 2 . ? -3.582 3.106 3.651 1.00 29.13 ? 38 HOH A O 1 HETATM 280 O O . HOH C 2 . ? -17.632 1.191 -5.136 1.00 65.41 ? 39 HOH A O 1 HETATM 281 O O . HOH C 2 . ? -8.131 1.147 3.365 1.00 43.55 ? 43 HOH A O 1 HETATM 282 O O . HOH D 2 . ? 21.293 2.318 22.034 1.00 48.09 ? 18 HOH B O 1 HETATM 283 O O . HOH D 2 . ? 21.181 1.953 18.165 1.00 43.57 ? 19 HOH B O 1 HETATM 284 O O . HOH D 2 . ? 3.476 -0.722 12.668 1.00 62.87 ? 24 HOH B O 1 HETATM 285 O O . HOH D 2 . ? 18.455 2.431 19.396 1.00 53.83 ? 26 HOH B O 1 HETATM 286 O O . HOH D 2 . ? 22.623 12.254 20.460 1.00 24.00 ? 31 HOH B O 1 HETATM 287 O O . HOH D 2 . ? 8.415 9.117 12.712 1.00 34.76 ? 32 HOH B O 1 HETATM 288 O O . HOH D 2 . ? 22.309 12.523 28.834 1.00 47.44 ? 34 HOH B O 1 HETATM 289 O O . HOH D 2 . ? 14.366 12.410 14.130 1.00 41.29 ? 35 HOH B O 1 HETATM 290 O O . HOH D 2 . ? 21.294 8.479 26.399 1.00 43.84 ? 37 HOH B O 1 HETATM 291 O O . HOH D 2 . ? 9.373 3.929 18.038 1.00 73.26 ? 40 HOH B O 1 HETATM 292 O O . HOH D 2 . ? 17.236 12.832 17.826 1.00 22.10 ? 41 HOH B O 1 HETATM 293 O O . HOH D 2 . ? 5.175 3.313 17.287 1.00 75.03 ? 42 HOH B O 1 HETATM 294 O O . HOH D 2 . ? 26.703 9.956 22.670 1.00 61.55 ? 44 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CPN 1 1 1 CPN CPN A . n A 1 2 GPN 2 2 2 GPN GPN A . n A 1 3 TPN 3 3 3 TPN TPN A . n A 1 4 APN 4 4 4 APN APN A . n A 1 5 CPN 5 5 5 CPN CPN A . n A 1 6 GPN 6 6 6 GPN GPN A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 NH2 8 8 8 NH2 NH2 A . n B 1 1 CPN 1 9 9 CPN CPN B . n B 1 2 GPN 2 10 10 GPN GPN B . n B 1 3 TPN 3 11 11 TPN TPN B . n B 1 4 APN 4 12 12 APN APN B . n B 1 5 CPN 5 13 13 CPN CPN B . n B 1 6 GPN 6 14 14 GPN GPN B . n B 1 7 LYS 7 15 15 LYS LYS B . n B 1 8 NH2 8 16 16 NH2 NH2 B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 17 17 HOH HOH A . C 2 HOH 2 20 20 HOH HOH A . C 2 HOH 3 21 21 HOH HOH A . C 2 HOH 4 22 22 HOH HOH A . C 2 HOH 5 23 23 HOH HOH A . C 2 HOH 6 25 25 HOH HOH A . C 2 HOH 7 27 27 HOH HOH A . C 2 HOH 8 28 28 HOH HOH A . C 2 HOH 9 29 29 HOH HOH A . C 2 HOH 10 30 30 HOH HOH A . C 2 HOH 11 33 33 HOH HOH A . C 2 HOH 12 36 36 HOH HOH A . C 2 HOH 13 38 38 HOH HOH A . C 2 HOH 14 39 39 HOH HOH A . C 2 HOH 15 43 43 HOH HOH A . D 2 HOH 1 18 18 HOH HOH B . D 2 HOH 2 19 19 HOH HOH B . D 2 HOH 3 24 24 HOH HOH B . D 2 HOH 4 26 26 HOH HOH B . D 2 HOH 5 31 31 HOH HOH B . D 2 HOH 6 32 32 HOH HOH B . D 2 HOH 7 34 34 HOH HOH B . D 2 HOH 8 35 35 HOH HOH B . D 2 HOH 9 37 37 HOH HOH B . D 2 HOH 10 40 40 HOH HOH B . D 2 HOH 11 41 41 HOH HOH B . D 2 HOH 12 42 42 HOH HOH B . D 2 HOH 13 44 44 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CPN 1 A CPN 1 ? DC ? 2 A GPN 2 A GPN 2 ? DG ? 3 A TPN 3 A TPN 3 ? DT ? 4 A APN 4 A APN 4 ? DA ? 5 A CPN 5 A CPN 5 ? DC ? 6 A GPN 6 A GPN 6 ? DG ? 7 B CPN 1 B CPN 9 ? DC ? 8 B GPN 2 B GPN 10 ? DG ? 9 B TPN 3 B TPN 11 ? DT ? 10 B APN 4 B APN 12 ? DA ? 11 B CPN 5 B CPN 13 ? DC ? 12 B GPN 6 B GPN 14 ? DG ? # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,C 2 1,3 B,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 35.9273086356 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 31.2091585743 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-01-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-08-28 5 'Structure model' 1 4 2023-08-23 6 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Atomic model' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' ndb_struct_conf_na 2 4 'Structure model' ndb_struct_na_base_pair 3 4 'Structure model' ndb_struct_na_base_pair_step 4 4 'Structure model' struct_biol 5 4 'Structure model' struct_conn 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_initial_refinement_model 10 5 'Structure model' struct_conn 11 5 'Structure model' struct_site 12 6 'Structure model' atom_site 13 6 'Structure model' chem_comp_atom 14 6 'Structure model' chem_comp_bond 15 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_dist_value' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 6 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 7 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 24 6 'Structure model' '_atom_site.auth_atom_id' 25 6 'Structure model' '_atom_site.label_atom_id' 26 6 'Structure model' '_chem_comp_atom.atom_id' 27 6 'Structure model' '_chem_comp_bond.atom_id_1' 28 6 'Structure model' '_chem_comp_bond.atom_id_2' 29 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 30 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 TRUNCATE 'data reduction' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement 3.851 ? 4 CCP4 'data scaling' '(TRUNCATE)' ? 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal APN "C8'" C N N 1 APN "C7'" C N N 2 APN "O7'" O N N 3 APN "C5'" C N N 4 APN C C N N 5 APN O O N N 6 APN OXT O N N 7 APN "N4'" N N N 8 APN "C3'" C N N 9 APN "C2'" C N N 10 APN N N N N 11 APN N9 N Y N 12 APN C8 C Y N 13 APN N7 N Y N 14 APN C5 C Y N 15 APN C6 C Y N 16 APN N6 N N N 17 APN N1 N Y N 18 APN C2 C Y N 19 APN N3 N Y N 20 APN C4 C Y N 21 APN "H8'1" H N N 22 APN "H8'2" H N N 23 APN "H5'1" H N N 24 APN "H5'2" H N N 25 APN HXT H N N 26 APN "H3'1" H N N 27 APN "H3'2" H N N 28 APN "H2'1" H N N 29 APN "H2'2" H N N 30 APN H H N N 31 APN H2 H N N 32 APN H3 H N N 33 APN H8 H N N 34 APN HN61 H N N 35 APN HN62 H N N 36 APN H21 H N N 37 CPN "C8'" C N N 38 CPN "C7'" C N N 39 CPN "O7'" O N N 40 CPN "C5'" C N N 41 CPN C C N N 42 CPN O O N N 43 CPN OXT O N N 44 CPN "N4'" N N N 45 CPN "C3'" C N N 46 CPN "C2'" C N N 47 CPN N N N N 48 CPN N1 N N N 49 CPN C2 C N N 50 CPN N3 N N N 51 CPN C4 C N N 52 CPN C5 C N N 53 CPN C6 C N N 54 CPN O2 O N N 55 CPN N4 N N N 56 CPN "H8'1" H N N 57 CPN "H8'2" H N N 58 CPN "H5'1" H N N 59 CPN "H5'2" H N N 60 CPN HXT H N N 61 CPN "H3'1" H N N 62 CPN "H3'2" H N N 63 CPN "H2'1" H N N 64 CPN "H2'2" H N N 65 CPN H H N N 66 CPN H2 H N N 67 CPN H3 H N N 68 CPN H5 H N N 69 CPN H6 H N N 70 CPN HN41 H N N 71 CPN HN42 H N N 72 GPN "C8'" C N N 73 GPN "C7'" C N N 74 GPN "O7'" O N N 75 GPN "C5'" C N N 76 GPN C C N N 77 GPN O O N N 78 GPN OXT O N N 79 GPN "N4'" N N N 80 GPN "C3'" C N N 81 GPN "C2'" C N N 82 GPN N N N N 83 GPN N9 N Y N 84 GPN C8 C Y N 85 GPN N7 N Y N 86 GPN C5 C Y N 87 GPN C6 C N N 88 GPN O6 O N N 89 GPN N1 N N N 90 GPN C2 C N N 91 GPN N2 N N N 92 GPN N3 N N N 93 GPN C4 C Y N 94 GPN "H8'1" H N N 95 GPN "H8'2" H N N 96 GPN "H5'1" H N N 97 GPN "H5'2" H N N 98 GPN HXT H N N 99 GPN "H3'1" H N N 100 GPN "H3'2" H N N 101 GPN "H2'1" H N N 102 GPN "H2'2" H N N 103 GPN H H N N 104 GPN H2 H N N 105 GPN H3 H N N 106 GPN H8 H N N 107 GPN HN1 H N N 108 GPN HN21 H N N 109 GPN HN22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 LYS N N N N 114 LYS CA C N S 115 LYS C C N N 116 LYS O O N N 117 LYS CB C N N 118 LYS CG C N N 119 LYS CD C N N 120 LYS CE C N N 121 LYS NZ N N N 122 LYS OXT O N N 123 LYS H H N N 124 LYS H2 H N N 125 LYS HA H N N 126 LYS HB2 H N N 127 LYS HB3 H N N 128 LYS HG2 H N N 129 LYS HG3 H N N 130 LYS HD2 H N N 131 LYS HD3 H N N 132 LYS HE2 H N N 133 LYS HE3 H N N 134 LYS HZ1 H N N 135 LYS HZ2 H N N 136 LYS HZ3 H N N 137 LYS HXT H N N 138 NH2 N N N N 139 NH2 HN1 H N N 140 NH2 HN2 H N N 141 TPN "C8'" C N N 142 TPN "C7'" C N N 143 TPN "O7'" O N N 144 TPN "C5'" C N N 145 TPN C C N N 146 TPN O O N N 147 TPN OXT O N N 148 TPN "N4'" N N N 149 TPN "C3'" C N N 150 TPN "C2'" C N N 151 TPN N N N N 152 TPN N1 N N N 153 TPN C6 C N N 154 TPN C2 C N N 155 TPN O2 O N N 156 TPN N3 N N N 157 TPN C4 C N N 158 TPN O4 O N N 159 TPN C5 C N N 160 TPN C5M C N N 161 TPN "H8'1" H N N 162 TPN "H8'2" H N N 163 TPN "H5'1" H N N 164 TPN "H5'2" H N N 165 TPN HXT H N N 166 TPN "H3'1" H N N 167 TPN "H3'2" H N N 168 TPN "H2'1" H N N 169 TPN "H2'2" H N N 170 TPN H H N N 171 TPN H2 H N N 172 TPN H3 H N N 173 TPN H6 H N N 174 TPN HN3 H N N 175 TPN HM51 H N N 176 TPN HM52 H N N 177 TPN HM53 H N N 178 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal APN "C8'" "C7'" sing N N 1 APN "C8'" N9 sing N N 2 APN "C8'" "H8'1" sing N N 3 APN "C8'" "H8'2" sing N N 4 APN "C7'" "O7'" doub N N 5 APN "C7'" "N4'" sing N N 6 APN "C5'" C sing N N 7 APN "C5'" "N4'" sing N N 8 APN "C5'" "H5'1" sing N N 9 APN "C5'" "H5'2" sing N N 10 APN C O doub N N 11 APN C OXT sing N N 12 APN OXT HXT sing N N 13 APN "N4'" "C3'" sing N N 14 APN "C3'" "C2'" sing N N 15 APN "C3'" "H3'1" sing N N 16 APN "C3'" "H3'2" sing N N 17 APN "C2'" N sing N N 18 APN "C2'" "H2'1" sing N N 19 APN "C2'" "H2'2" sing N N 20 APN N H sing N N 21 APN N H2 sing N N 22 APN N H3 sing N N 23 APN N9 C8 sing Y N 24 APN N9 C4 sing Y N 25 APN C8 N7 doub Y N 26 APN C8 H8 sing N N 27 APN N7 C5 sing Y N 28 APN C5 C6 sing Y N 29 APN C5 C4 doub Y N 30 APN C6 N6 sing N N 31 APN C6 N1 doub Y N 32 APN N6 HN61 sing N N 33 APN N6 HN62 sing N N 34 APN N1 C2 sing Y N 35 APN C2 N3 doub Y N 36 APN C2 H21 sing N N 37 APN N3 C4 sing Y N 38 CPN "C8'" "C7'" sing N N 39 CPN "C8'" N1 sing N N 40 CPN "C8'" "H8'1" sing N N 41 CPN "C8'" "H8'2" sing N N 42 CPN "C7'" "O7'" doub N N 43 CPN "C7'" "N4'" sing N N 44 CPN "C5'" C sing N N 45 CPN "C5'" "N4'" sing N N 46 CPN "C5'" "H5'1" sing N N 47 CPN "C5'" "H5'2" sing N N 48 CPN C O doub N N 49 CPN C OXT sing N N 50 CPN OXT HXT sing N N 51 CPN "N4'" "C3'" sing N N 52 CPN "C3'" "C2'" sing N N 53 CPN "C3'" "H3'1" sing N N 54 CPN "C3'" "H3'2" sing N N 55 CPN "C2'" N sing N N 56 CPN "C2'" "H2'1" sing N N 57 CPN "C2'" "H2'2" sing N N 58 CPN N H sing N N 59 CPN N H2 sing N N 60 CPN N H3 sing N N 61 CPN N1 C2 sing N N 62 CPN N1 C6 sing N N 63 CPN C2 N3 sing N N 64 CPN C2 O2 doub N N 65 CPN N3 C4 doub N N 66 CPN C4 C5 sing N N 67 CPN C4 N4 sing N N 68 CPN C5 C6 doub N N 69 CPN C5 H5 sing N N 70 CPN C6 H6 sing N N 71 CPN N4 HN41 sing N N 72 CPN N4 HN42 sing N N 73 GPN "C8'" "C7'" sing N N 74 GPN "C8'" N9 sing N N 75 GPN "C8'" "H8'1" sing N N 76 GPN "C8'" "H8'2" sing N N 77 GPN "C7'" "O7'" doub N N 78 GPN "C7'" "N4'" sing N N 79 GPN "C5'" C sing N N 80 GPN "C5'" "N4'" sing N N 81 GPN "C5'" "H5'1" sing N N 82 GPN "C5'" "H5'2" sing N N 83 GPN C O doub N N 84 GPN C OXT sing N N 85 GPN OXT HXT sing N N 86 GPN "N4'" "C3'" sing N N 87 GPN "C3'" "C2'" sing N N 88 GPN "C3'" "H3'1" sing N N 89 GPN "C3'" "H3'2" sing N N 90 GPN "C2'" N sing N N 91 GPN "C2'" "H2'1" sing N N 92 GPN "C2'" "H2'2" sing N N 93 GPN N H sing N N 94 GPN N H2 sing N N 95 GPN N H3 sing N N 96 GPN N9 C8 sing Y N 97 GPN N9 C4 sing Y N 98 GPN C8 N7 doub Y N 99 GPN C8 H8 sing N N 100 GPN N7 C5 sing Y N 101 GPN C5 C6 sing N N 102 GPN C5 C4 doub Y N 103 GPN C6 O6 doub N N 104 GPN C6 N1 sing N N 105 GPN N1 C2 sing N N 106 GPN N1 HN1 sing N N 107 GPN C2 N2 sing N N 108 GPN C2 N3 doub N N 109 GPN N2 HN21 sing N N 110 GPN N2 HN22 sing N N 111 GPN N3 C4 sing N N 112 HOH O H1 sing N N 113 HOH O H2 sing N N 114 LYS N CA sing N N 115 LYS N H sing N N 116 LYS N H2 sing N N 117 LYS CA C sing N N 118 LYS CA CB sing N N 119 LYS CA HA sing N N 120 LYS C O doub N N 121 LYS C OXT sing N N 122 LYS CB CG sing N N 123 LYS CB HB2 sing N N 124 LYS CB HB3 sing N N 125 LYS CG CD sing N N 126 LYS CG HG2 sing N N 127 LYS CG HG3 sing N N 128 LYS CD CE sing N N 129 LYS CD HD2 sing N N 130 LYS CD HD3 sing N N 131 LYS CE NZ sing N N 132 LYS CE HE2 sing N N 133 LYS CE HE3 sing N N 134 LYS NZ HZ1 sing N N 135 LYS NZ HZ2 sing N N 136 LYS NZ HZ3 sing N N 137 LYS OXT HXT sing N N 138 NH2 N HN1 sing N N 139 NH2 N HN2 sing N N 140 TPN "C8'" "C7'" sing N N 141 TPN "C8'" N1 sing N N 142 TPN "C8'" "H8'1" sing N N 143 TPN "C8'" "H8'2" sing N N 144 TPN "C7'" "O7'" doub N N 145 TPN "C7'" "N4'" sing N N 146 TPN "C5'" C sing N N 147 TPN "C5'" "N4'" sing N N 148 TPN "C5'" "H5'1" sing N N 149 TPN "C5'" "H5'2" sing N N 150 TPN C O doub N N 151 TPN C OXT sing N N 152 TPN OXT HXT sing N N 153 TPN "N4'" "C3'" sing N N 154 TPN "C3'" "C2'" sing N N 155 TPN "C3'" "H3'1" sing N N 156 TPN "C3'" "H3'2" sing N N 157 TPN "C2'" N sing N N 158 TPN "C2'" "H2'1" sing N N 159 TPN "C2'" "H2'2" sing N N 160 TPN N H sing N N 161 TPN N H2 sing N N 162 TPN N H3 sing N N 163 TPN N1 C6 sing N N 164 TPN N1 C2 sing N N 165 TPN C6 C5 doub N N 166 TPN C6 H6 sing N N 167 TPN C2 O2 doub N N 168 TPN C2 N3 sing N N 169 TPN N3 C4 sing N N 170 TPN N3 HN3 sing N N 171 TPN C4 O4 doub N N 172 TPN C4 C5 sing N N 173 TPN C5 C5M sing N N 174 TPN C5M HM51 sing N N 175 TPN C5M HM52 sing N N 176 TPN C5M HM53 sing N N 177 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1RRU 'double helix' 1RRU 'z-form double helix' 1RRU 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A CPN 1 1_555 A GPN 6 2_555 -0.972 -0.412 -0.093 4.721 0.092 -3.324 1 A_CPN1:GPN6_A A 1 ? A 6 ? 19 1 1 A GPN 2 1_555 A CPN 5 2_555 0.770 -0.473 -0.278 -3.942 -9.056 -3.170 2 A_GPN2:CPN5_A A 2 ? A 5 ? 19 1 1 A TPN 3 1_555 A APN 4 2_555 -0.148 -0.519 -0.498 0.640 -7.447 -1.452 3 A_TPN3:APN4_A A 3 ? A 4 ? 20 1 1 A APN 4 1_555 A TPN 3 2_555 0.148 -0.519 -0.498 -0.640 -7.447 -1.452 4 A_APN4:TPN3_A A 4 ? A 3 ? 20 1 1 A CPN 5 1_555 A GPN 2 2_555 -0.770 -0.473 -0.278 3.942 -9.056 -3.170 5 A_CPN5:GPN2_A A 5 ? A 2 ? 19 1 1 A GPN 6 1_555 A CPN 1 2_555 0.972 -0.412 -0.093 -4.721 0.092 -3.324 6 A_GPN6:CPN1_A A 6 ? A 1 ? 19 1 1 B CPN 1 1_555 B GPN 6 2_656 -0.642 -0.126 -0.374 12.009 8.225 0.203 7 B_CPN9:GPN14_B B 9 ? B 14 ? 19 1 1 B GPN 2 1_555 B CPN 5 2_656 0.917 -0.669 0.033 -0.460 5.800 3.948 8 B_GPN10:CPN13_B B 10 ? B 13 ? 19 1 1 B TPN 3 1_555 B APN 4 2_656 -0.256 -0.438 -0.425 1.880 7.536 0.270 9 B_TPN11:APN12_B B 11 ? B 12 ? 20 1 1 B APN 4 1_555 B TPN 3 2_656 0.256 -0.438 -0.425 -1.880 7.536 0.270 10 B_APN12:TPN11_B B 12 ? B 11 ? 20 1 1 B CPN 5 1_555 B GPN 2 2_656 -0.917 -0.669 0.033 0.460 5.800 3.948 11 B_CPN13:GPN10_B B 13 ? B 10 ? 19 1 1 B GPN 6 1_555 B CPN 1 2_656 0.642 -0.126 -0.374 -12.009 8.225 0.203 12 B_GPN14:CPN9_B B 14 ? B 9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A CPN 1 1_555 A GPN 6 2_555 A GPN 2 1_555 A CPN 5 2_555 -0.026 -2.279 3.698 1.750 3.132 28.762 -5.310 0.475 3.428 6.273 -3.506 28.981 1 AA_CPN1GPN2:CPN5GPN6_AA A 1 ? A 6 ? A 2 ? A 5 ? 1 A GPN 2 1_555 A CPN 5 2_555 A TPN 3 1_555 A APN 4 2_555 -0.572 -2.843 3.244 2.423 1.575 13.095 -13.689 4.778 2.733 6.798 -10.458 13.408 2 AA_GPN2TPN3:APN4CPN5_AA A 2 ? A 5 ? A 3 ? A 4 ? 1 A TPN 3 1_555 A APN 4 2_555 A APN 4 1_555 A TPN 3 2_555 0.000 -1.064 3.621 0.000 6.477 17.169 -7.108 0.000 3.018 20.760 0.000 18.342 3 AA_TPN3APN4:TPN3APN4_AA A 3 ? A 4 ? A 4 ? A 3 ? 1 A APN 4 1_555 A TPN 3 2_555 A CPN 5 1_555 A GPN 2 2_555 0.572 -2.843 3.244 -2.423 1.575 13.095 -13.689 -4.778 2.733 6.798 10.458 13.408 4 AA_APN4CPN5:GPN2TPN3_AA A 4 ? A 3 ? A 5 ? A 2 ? 1 A CPN 5 1_555 A GPN 2 2_555 A GPN 6 1_555 A CPN 1 2_555 0.026 -2.279 3.698 -1.750 3.132 28.762 -5.310 -0.475 3.428 6.273 3.506 28.981 5 AA_CPN5GPN6:CPN1GPN2_AA A 5 ? A 2 ? A 6 ? A 1 ? 1 B CPN 1 1_555 B GPN 6 2_656 B GPN 2 1_555 B CPN 5 2_656 0.243 -2.459 3.749 -5.908 -5.987 -8.741 18.905 -6.020 1.611 31.302 -30.889 -12.125 6 BB_CPN9GPN10:CPN13GPN14_BB B 9 ? B 14 ? B 10 ? B 13 ? 1 B GPN 2 1_555 B CPN 5 2_656 B TPN 3 1_555 B APN 4 2_656 0.023 -2.447 3.252 4.192 5.299 -30.954 3.451 0.860 3.577 -9.784 7.740 -31.665 7 BB_GPN10TPN11:APN12CPN13_BB B 10 ? B 13 ? B 11 ? B 12 ? 1 B TPN 3 1_555 B APN 4 2_656 B APN 4 1_555 B TPN 3 2_656 0.000 -1.729 3.590 0.000 -12.108 -13.916 11.415 0.000 1.585 41.200 0.000 -18.426 8 BB_TPN11APN12:TPN11APN12_BB B 11 ? B 12 ? B 12 ? B 11 ? 1 B APN 4 1_555 B TPN 3 2_656 B CPN 5 1_555 B GPN 2 2_656 -0.023 -2.447 3.252 -4.192 5.299 -30.954 3.451 -0.860 3.577 -9.784 -7.740 -31.665 9 BB_APN12CPN13:GPN10TPN11_BB B 12 ? B 11 ? B 13 ? B 10 ? 1 B CPN 5 1_555 B GPN 2 2_656 B GPN 6 1_555 B CPN 1 2_656 -0.243 -2.459 3.749 5.908 -5.987 -8.741 18.905 6.020 1.611 31.302 30.889 -12.125 10 BB_CPN13GPN14:CPN9GPN10_BB B 13 ? B 10 ? B 14 ? B 9 ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PUP _pdbx_initial_refinement_model.details 'PDB entry 1PUP' #