data_1ZFB # _entry.id 1ZFB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZFB pdb_00001zfb 10.2210/pdb1zfb/pdb NDB BD0081 ? ? RCSB RCSB032654 ? ? WWPDB D_1000032654 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-10 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 13 5 'Structure model' '_pdbx_struct_conn_angle.value' 14 5 'Structure model' '_struct_conn.pdbx_dist_value' 15 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_symmetry' 22 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_symmetry' 29 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 1ZFB _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-04-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1P4Y . unspecified PDB 1P4Z . unspecified PDB 1DCW . unspecified PDB 1DCV . unspecified PDB 1ZEW . unspecified PDB 1ZEX . unspecified PDB 1ZEY . unspecified PDB 1ZEZ . unspecified PDB 1ZF0 . unspecified PDB 1ZF1 . unspecified PDB 1ZF2 . unspecified PDB 1ZF3 . unspecified PDB 1ZF4 . unspecified PDB 1ZF5 . unspecified PDB 1ZF6 . unspecified PDB 1ZF7 . unspecified PDB 1ZF8 . unspecified PDB 1ZF9 . unspecified PDB 1ZFA . unspecified PDB 1ZFC . unspecified PDB 1ZFE . unspecified PDB 1ZFF . unspecified PDB 1ZFG . unspecified PDB 1ZFH . unspecified PDB 1ZFM . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hays, F.A.' 1 'Teegarden, A.T.' 2 'Jones, Z.J.R.' 3 'Harms, M.' 4 'Raup, D.' 5 'Watson, J.' 6 'Cavaliere, E.' 7 'Ho, P.S.' 8 # _citation.id primary _citation.title 'How sequence defines structure: a crystallographic map of DNA structure and conformation.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 102 _citation.page_first 7157 _citation.page_last 7162 _citation.year 2005 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15870206 _citation.pdbx_database_id_DOI 10.1073/pnas.0409455102 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hays, F.A.' 1 ? primary 'Teegarden, A.' 2 ? primary 'Jones, Z.J.' 3 ? primary 'Harms, M.' 4 ? primary 'Raup, D.' 5 ? primary 'Watson, J.' 6 ? primary 'Cavaliere, E.' 7 ? primary 'Ho, P.S.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*GP*CP*CP*GP*GP*CP*GP*G)-3'" 3046.980 2 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 water nat water 18.015 84 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DC)(DC)(DG)(DG)(DC)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCGCCGGCGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DC n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 DC n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;DNA WAS SYNTHESIZED ON AN APPLIED BIOSYSTEMS DNA SYNTHESIZER USING PHOSPHORAMIDITE CHEMISTRY, WITH THE TRITYL-PROTECTING GROUP LEFT INTACT AT THE 5'-TERMINAL NUCLEOTIDE THEN DEPROTECTED BY TREATMENT WITH 3% ACETIC ACID FOR FIFTEEN MINUTES, NEUTRALIZED WITH AMMONIUM HYDROXIDE, AND DESALTED ON A SIGMA G-25 SEPHADEX COLUMN. ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n B 1 1 DC 1 11 11 DC C B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DG 3 13 13 DG G B . n B 1 4 DC 4 14 14 DC C B . n B 1 5 DC 5 15 15 DC C B . n B 1 6 DG 6 16 16 DG G B . n B 1 7 DG 7 17 17 DG G B . n B 1 8 DC 8 18 18 DC C B . n B 1 9 DG 9 19 19 DG G B . n B 1 10 DG 10 20 20 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA 1 21 21 CA CA B . D 2 CA 1 22 22 CA CA B . E 3 HOH 1 23 23 HOH HOH A . E 3 HOH 2 24 24 HOH HOH A . E 3 HOH 3 27 27 HOH HOH A . E 3 HOH 4 29 29 HOH HOH A . E 3 HOH 5 30 30 HOH HOH A . E 3 HOH 6 32 32 HOH HOH A . E 3 HOH 7 33 33 HOH HOH A . E 3 HOH 8 35 35 HOH HOH A . E 3 HOH 9 37 37 HOH HOH A . E 3 HOH 10 40 40 HOH HOH A . E 3 HOH 11 43 43 HOH HOH A . E 3 HOH 12 44 44 HOH HOH A . E 3 HOH 13 45 45 HOH HOH A . E 3 HOH 14 48 48 HOH HOH A . E 3 HOH 15 50 50 HOH HOH A . E 3 HOH 16 51 51 HOH HOH A . E 3 HOH 17 52 52 HOH HOH A . E 3 HOH 18 56 56 HOH HOH A . E 3 HOH 19 60 60 HOH HOH A . E 3 HOH 20 64 64 HOH HOH A . E 3 HOH 21 66 66 HOH HOH A . E 3 HOH 22 68 68 HOH HOH A . E 3 HOH 23 69 69 HOH HOH A . E 3 HOH 24 70 70 HOH HOH A . E 3 HOH 25 71 71 HOH HOH A . E 3 HOH 26 72 72 HOH HOH A . E 3 HOH 27 74 74 HOH HOH A . E 3 HOH 28 76 76 HOH HOH A . E 3 HOH 29 77 77 HOH HOH A . E 3 HOH 30 79 79 HOH HOH A . E 3 HOH 31 80 80 HOH HOH A . E 3 HOH 32 84 84 HOH HOH A . E 3 HOH 33 85 85 HOH HOH A . E 3 HOH 34 86 86 HOH HOH A . E 3 HOH 35 88 88 HOH HOH A . E 3 HOH 36 89 89 HOH HOH A . E 3 HOH 37 90 90 HOH HOH A . E 3 HOH 38 92 92 HOH HOH A . E 3 HOH 39 93 93 HOH HOH A . E 3 HOH 40 94 94 HOH HOH A . E 3 HOH 41 95 95 HOH HOH A . E 3 HOH 42 101 101 HOH HOH A . E 3 HOH 43 103 103 HOH HOH A . E 3 HOH 44 104 104 HOH HOH A . E 3 HOH 45 105 105 HOH HOH A . F 3 HOH 1 25 25 HOH HOH B . F 3 HOH 2 26 26 HOH HOH B . F 3 HOH 3 28 28 HOH HOH B . F 3 HOH 4 31 31 HOH HOH B . F 3 HOH 5 34 34 HOH HOH B . F 3 HOH 6 36 36 HOH HOH B . F 3 HOH 7 38 38 HOH HOH B . F 3 HOH 8 39 39 HOH HOH B . F 3 HOH 9 41 41 HOH HOH B . F 3 HOH 10 42 42 HOH HOH B . F 3 HOH 11 46 46 HOH HOH B . F 3 HOH 12 47 47 HOH HOH B . F 3 HOH 13 49 49 HOH HOH B . F 3 HOH 14 53 53 HOH HOH B . F 3 HOH 15 54 54 HOH HOH B . F 3 HOH 16 55 55 HOH HOH B . F 3 HOH 17 57 57 HOH HOH B . F 3 HOH 18 58 58 HOH HOH B . F 3 HOH 19 59 59 HOH HOH B . F 3 HOH 20 61 61 HOH HOH B . F 3 HOH 21 62 62 HOH HOH B . F 3 HOH 22 63 63 HOH HOH B . F 3 HOH 23 65 65 HOH HOH B . F 3 HOH 24 67 67 HOH HOH B . F 3 HOH 25 73 73 HOH HOH B . F 3 HOH 26 75 75 HOH HOH B . F 3 HOH 27 78 78 HOH HOH B . F 3 HOH 28 81 81 HOH HOH B . F 3 HOH 29 82 82 HOH HOH B . F 3 HOH 30 83 83 HOH HOH B . F 3 HOH 31 87 87 HOH HOH B . F 3 HOH 32 91 91 HOH HOH B . F 3 HOH 33 96 96 HOH HOH B . F 3 HOH 34 97 97 HOH HOH B . F 3 HOH 35 98 98 HOH HOH B . F 3 HOH 36 99 99 HOH HOH B . F 3 HOH 37 100 100 HOH HOH B . F 3 HOH 38 102 102 HOH HOH B . F 3 HOH 39 106 106 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 AMoRE . ? ? ? ? phasing ? ? ? 4 # _cell.entry_id 1ZFB _cell.length_a 53.640 _cell.length_b 53.640 _cell.length_c 44.820 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZFB _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1ZFB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'Na Cacodylate, CaCl2, Spermine, MPD in resevoir, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.00' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'Na Cacodylate' ? ? ? 1 2 1 CaCl2 ? ? ? 1 3 1 Spermine ? ? ? 1 4 1 MPD ? ? ? 1 5 1 H2O ? ? ? 1 6 2 'Na Cacodylate' ? ? ? 1 7 2 CaCl2 ? ? ? 1 8 2 MPD ? ? ? 1 9 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 103.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2001-11-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.542 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.542 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ZFB _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 99.000 _reflns.d_resolution_high 1.650 _reflns.number_obs 5484 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.0000 _reflns.B_iso_Wilson_estimate 6.0 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.percent_possible_all 96.2 _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.800 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ZFB _refine.ls_number_reflns_obs 5473 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 30238.35 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 16.35 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 94.4 _refine.ls_R_factor_obs 0.233 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.233 _refine.ls_R_factor_R_free 0.283 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.700 _refine.ls_number_reflns_R_free 584 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 9.2 _refine.aniso_B[1][1] -0.64900 _refine.aniso_B[2][2] -0.64900 _refine.aniso_B[3][3] 1.29900 _refine.aniso_B[1][2] -0.63200 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.671 _refine.solvent_model_param_bsol 132.057 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'STRUCTURE IS NOT FULLY REFINED. REFER TO CITATION ABOVE FOR DETAILS.' _refine.pdbx_starting_model 'ndb entry BD0015' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ZFB _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 84 _refine_hist.number_atoms_total 490 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 16.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.003 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.18 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.506 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 0.828 0.000 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.65 _refine_ls_shell.d_res_low 1.75 _refine_ls_shell.number_reflns_R_work 639 _refine_ls_shell.R_factor_R_work 0.256 _refine_ls_shell.percent_reflns_obs 74.7 _refine_ls_shell.R_factor_R_free 0.312 _refine_ls_shell.R_factor_R_free_error 0.035 _refine_ls_shell.percent_reflns_R_free 11.1 _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:DNA-RNA_REP.PARAM CNS_TOPPAR:DNA-RNA.TOP 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:WATER_REP.PARAM CNS_TOPPAR:DNA-RNA.LINK 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:ION.PARAM CNS_TOPPAR:WATER.TOP 'X-RAY DIFFRACTION' 4 ? CNS_TOPPAR:ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1ZFB _struct.title 'GGC Duplex B-DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Crystallographic Screen, DNA Structure, Holliday Junction, Molecular Structure, DNA' _struct_keywords.entry_id 1ZFB _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1ZFB _struct_ref.pdbx_db_accession 1ZFB _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZFB A 1 ? 10 ? 1ZFB 1 ? 10 ? 1 10 2 1 1ZFB B 1 ? 10 ? 1ZFB 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E HOH . O ? ? ? 1_555 D CA . CA ? ? A HOH 27 B CA 22 1_555 ? ? ? ? ? ? ? 2.515 ? ? metalc2 metalc ? ? E HOH . O ? ? ? 3_565 C CA . CA ? ? A HOH 30 B CA 21 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc3 metalc ? ? E HOH . O ? ? ? 1_555 C CA . CA ? ? A HOH 35 B CA 21 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc4 metalc ? ? E HOH . O ? ? ? 1_555 D CA . CA ? ? A HOH 45 B CA 22 1_555 ? ? ? ? ? ? ? 2.464 ? ? metalc5 metalc ? ? E HOH . O ? ? ? 1_555 D CA . CA ? ? A HOH 74 B CA 22 1_555 ? ? ? ? ? ? ? 2.915 ? ? metalc6 metalc ? ? E HOH . O ? ? ? 1_555 D CA . CA ? ? A HOH 80 B CA 22 1_555 ? ? ? ? ? ? ? 2.397 ? ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 21 B HOH 31 1_555 ? ? ? ? ? ? ? 2.705 ? ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 21 B HOH 38 1_555 ? ? ? ? ? ? ? 2.115 ? ? metalc9 metalc ? ? C CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 21 B HOH 39 1_555 ? ? ? ? ? ? ? 1.952 ? ? metalc10 metalc ? ? C CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 21 B HOH 96 1_555 ? ? ? ? ? ? ? 2.811 ? ? metalc11 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 22 B HOH 81 6_455 ? ? ? ? ? ? ? 3.248 ? ? metalc12 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 22 B HOH 91 8_554 ? ? ? ? ? ? ? 3.071 ? ? metalc13 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 22 B HOH 99 1_555 ? ? ? ? ? ? ? 3.117 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 7 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 7 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 7 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? E HOH . ? A HOH 45 ? 1_555 73.2 ? 2 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? E HOH . ? A HOH 74 ? 1_555 115.0 ? 3 O ? E HOH . ? A HOH 45 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? E HOH . ? A HOH 74 ? 1_555 63.9 ? 4 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? E HOH . ? A HOH 80 ? 1_555 83.1 ? 5 O ? E HOH . ? A HOH 45 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? E HOH . ? A HOH 80 ? 1_555 89.8 ? 6 O ? E HOH . ? A HOH 74 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? E HOH . ? A HOH 80 ? 1_555 52.1 ? 7 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 81 ? 6_455 77.3 ? 8 O ? E HOH . ? A HOH 45 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 81 ? 6_455 58.2 ? 9 O ? E HOH . ? A HOH 74 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 81 ? 6_455 113.1 ? 10 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 81 ? 6_455 146.1 ? 11 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 91 ? 8_554 163.3 ? 12 O ? E HOH . ? A HOH 45 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 91 ? 8_554 113.4 ? 13 O ? E HOH . ? A HOH 74 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 91 ? 8_554 59.4 ? 14 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 91 ? 8_554 81.6 ? 15 O ? F HOH . ? B HOH 81 ? 6_455 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 91 ? 8_554 119.4 ? 16 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 99 ? 1_555 84.1 ? 17 O ? E HOH . ? A HOH 45 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 99 ? 1_555 153.3 ? 18 O ? E HOH . ? A HOH 74 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 99 ? 1_555 141.2 ? 19 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 99 ? 1_555 101.6 ? 20 O ? F HOH . ? B HOH 81 ? 6_455 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 99 ? 1_555 103.6 ? 21 O ? F HOH . ? B HOH 91 ? 8_554 CA ? D CA . ? B CA 22 ? 1_555 O ? F HOH . ? B HOH 99 ? 1_555 92.3 ? 22 O ? E HOH . ? A HOH 30 ? 3_565 CA ? C CA . ? B CA 21 ? 1_555 O ? E HOH . ? A HOH 35 ? 1_555 67.9 ? 23 O ? E HOH . ? A HOH 30 ? 3_565 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 161.5 ? 24 O ? E HOH . ? A HOH 35 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 129.7 ? 25 O ? E HOH . ? A HOH 30 ? 3_565 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 38 ? 1_555 133.9 ? 26 O ? E HOH . ? A HOH 35 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 38 ? 1_555 78.9 ? 27 O ? F HOH . ? B HOH 31 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 38 ? 1_555 62.5 ? 28 O ? E HOH . ? A HOH 30 ? 3_565 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 39 ? 1_555 79.3 ? 29 O ? E HOH . ? A HOH 35 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 39 ? 1_555 118.7 ? 30 O ? F HOH . ? B HOH 31 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 39 ? 1_555 93.8 ? 31 O ? F HOH . ? B HOH 38 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 39 ? 1_555 90.2 ? 32 O ? E HOH . ? A HOH 30 ? 3_565 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 96 ? 1_555 58.4 ? 33 O ? E HOH . ? A HOH 35 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 96 ? 1_555 61.9 ? 34 O ? F HOH . ? B HOH 31 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 96 ? 1_555 131.2 ? 35 O ? F HOH . ? B HOH 38 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 96 ? 1_555 78.2 ? 36 O ? F HOH . ? B HOH 39 ? 1_555 CA ? C CA . ? B CA 21 ? 1_555 O ? F HOH . ? B HOH 96 ? 1_555 56.8 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CA 21 ? 6 'BINDING SITE FOR RESIDUE CA B 21' AC2 Software B CA 22 ? 5 'BINDING SITE FOR RESIDUE CA B 22' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH E . ? HOH A 30 . ? 3_565 ? 2 AC1 6 HOH E . ? HOH A 35 . ? 1_555 ? 3 AC1 6 HOH F . ? HOH B 31 . ? 1_555 ? 4 AC1 6 HOH F . ? HOH B 38 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH B 39 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH B 96 . ? 1_555 ? 7 AC2 5 HOH E . ? HOH A 27 . ? 1_555 ? 8 AC2 5 HOH E . ? HOH A 45 . ? 1_555 ? 9 AC2 5 HOH E . ? HOH A 74 . ? 1_555 ? 10 AC2 5 HOH E . ? HOH A 80 . ? 1_555 ? 11 AC2 5 HOH F . ? HOH B 91 . ? 8_554 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N2 B DG 20 ? ? O B HOH 82 ? ? 1.87 2 1 N4 B DC 14 ? ? O B HOH 67 ? ? 1.90 3 1 O2 A DC 5 ? ? O A HOH 50 ? ? 1.94 4 1 N1 A DG 10 ? ? O A HOH 85 ? ? 1.97 5 1 OP1 B DG 16 ? ? O B HOH 65 ? ? 1.98 6 1 "O5'" B DG 13 ? ? O B HOH 83 ? ? 2.01 7 1 O6 A DG 7 ? ? O B HOH 67 ? ? 2.04 8 1 O A HOH 66 ? ? O A HOH 94 ? ? 2.06 9 1 N1 A DG 7 ? ? O A HOH 33 ? ? 2.07 10 1 C6 A DG 10 ? ? O A HOH 85 ? ? 2.13 11 1 N2 B DG 19 ? ? O B HOH 82 ? ? 2.14 12 1 "C3'" B DG 13 ? ? O B HOH 81 ? ? 2.14 13 1 OP1 B DG 19 ? ? O B HOH 42 ? ? 2.15 14 1 N3 A DC 5 ? ? O A HOH 52 ? ? 2.15 15 1 O2 A DC 2 ? ? O B HOH 82 ? ? 2.19 16 1 OP1 A DC 5 ? ? O A HOH 90 ? ? 2.19 17 1 O2 A DC 8 ? ? O A HOH 60 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 N3 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 DC _pdbx_validate_symm_contact.auth_seq_id_1 1 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 85 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_455 _pdbx_validate_symm_contact.dist 2.14 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 64 ? E HOH . 2 1 A HOH 79 ? E HOH . 3 1 A HOH 88 ? E HOH . 4 1 A HOH 89 ? E HOH . 5 1 B HOH 62 ? F HOH . 6 1 B HOH 63 ? F HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 DC OP3 O N N 2 DC P P N N 3 DC OP1 O N N 4 DC OP2 O N N 5 DC "O5'" O N N 6 DC "C5'" C N N 7 DC "C4'" C N R 8 DC "O4'" O N N 9 DC "C3'" C N S 10 DC "O3'" O N N 11 DC "C2'" C N N 12 DC "C1'" C N R 13 DC N1 N N N 14 DC C2 C N N 15 DC O2 O N N 16 DC N3 N N N 17 DC C4 C N N 18 DC N4 N N N 19 DC C5 C N N 20 DC C6 C N N 21 DC HOP3 H N N 22 DC HOP2 H N N 23 DC "H5'" H N N 24 DC "H5''" H N N 25 DC "H4'" H N N 26 DC "H3'" H N N 27 DC "HO3'" H N N 28 DC "H2'" H N N 29 DC "H2''" H N N 30 DC "H1'" H N N 31 DC H41 H N N 32 DC H42 H N N 33 DC H5 H N N 34 DC H6 H N N 35 DG OP3 O N N 36 DG P P N N 37 DG OP1 O N N 38 DG OP2 O N N 39 DG "O5'" O N N 40 DG "C5'" C N N 41 DG "C4'" C N R 42 DG "O4'" O N N 43 DG "C3'" C N S 44 DG "O3'" O N N 45 DG "C2'" C N N 46 DG "C1'" C N R 47 DG N9 N Y N 48 DG C8 C Y N 49 DG N7 N Y N 50 DG C5 C Y N 51 DG C6 C N N 52 DG O6 O N N 53 DG N1 N N N 54 DG C2 C N N 55 DG N2 N N N 56 DG N3 N N N 57 DG C4 C Y N 58 DG HOP3 H N N 59 DG HOP2 H N N 60 DG "H5'" H N N 61 DG "H5''" H N N 62 DG "H4'" H N N 63 DG "H3'" H N N 64 DG "HO3'" H N N 65 DG "H2'" H N N 66 DG "H2''" H N N 67 DG "H1'" H N N 68 DG H8 H N N 69 DG H1 H N N 70 DG H21 H N N 71 DG H22 H N N 72 HOH O O N N 73 HOH H1 H N N 74 HOH H2 H N N 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 # _ndb_struct_conf_na.entry_id 1ZFB _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.317 -0.113 0.581 -14.990 -11.403 -1.659 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.269 -0.165 0.334 -10.655 -4.762 -0.661 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DG 3 1_555 B DC 8 1_555 -0.334 -0.150 0.176 -9.290 -17.313 5.810 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1 1 A DC 4 1_555 B DG 7 1_555 0.284 0.001 0.001 -2.418 -12.600 0.690 4 A_DC4:DG17_B A 4 ? B 17 ? 19 1 1 A DC 5 1_555 B DG 6 1_555 0.187 -0.147 0.002 -2.344 -5.466 -4.061 5 A_DC5:DG16_B A 5 ? B 16 ? 19 1 1 A DG 6 1_555 B DC 5 1_555 -0.456 -0.023 -0.046 -0.196 -5.685 1.084 6 A_DG6:DC15_B A 6 ? B 15 ? 19 1 1 A DG 7 1_555 B DC 4 1_555 -0.215 -0.042 0.174 -6.132 -14.247 -0.050 7 A_DG7:DC14_B A 7 ? B 14 ? 19 1 1 A DC 8 1_555 B DG 3 1_555 0.146 -0.292 0.110 -7.684 2.513 -2.006 8 A_DC8:DG13_B A 8 ? B 13 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 -0.308 0.055 0.262 4.181 -20.824 1.703 9 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 -0.357 -0.059 0.372 8.328 -14.322 6.759 10 A_DG10:DC11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.202 0.861 3.441 5.066 0.645 39.021 1.197 0.336 3.452 0.960 -7.544 39.340 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.753 0.870 3.268 -1.835 8.625 32.876 0.056 0.983 3.416 14.907 3.171 34.007 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DG 3 1_555 B DC 8 1_555 A DC 4 1_555 B DG 7 1_555 -0.723 0.322 3.072 -1.682 -0.581 39.167 0.545 0.887 3.095 -0.866 2.508 39.206 3 AA_DG3DC4:DG17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DC 4 1_555 B DG 7 1_555 A DC 5 1_555 B DG 6 1_555 1.111 0.336 3.487 4.240 2.178 32.742 0.189 -1.170 3.612 3.839 -7.473 33.078 4 AA_DC4DC5:DG16DG17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DC 5 1_555 B DG 6 1_555 A DG 6 1_555 B DC 5 1_555 0.212 1.134 3.270 2.508 9.732 32.310 0.292 0.063 3.463 16.983 -4.377 33.797 5 AA_DC5DG6:DC15DG16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A DG 6 1_555 B DC 5 1_555 A DG 7 1_555 B DC 4 1_555 -1.469 0.595 3.520 -10.278 2.809 35.713 0.504 0.735 3.819 4.459 16.316 37.219 6 AA_DG6DG7:DC14DC15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DG 7 1_555 B DC 4 1_555 A DC 8 1_555 B DG 3 1_555 0.739 0.605 3.407 2.286 -5.021 38.770 1.527 -0.818 3.342 -7.517 -3.422 39.145 7 AA_DG7DC8:DG13DC14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.534 0.984 3.176 1.921 10.961 26.403 -0.560 1.527 3.270 22.754 -3.987 28.614 8 AA_DC8DG9:DC12DG13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 0.085 1.919 3.278 -6.017 -0.101 39.196 2.842 -0.828 3.226 -0.149 8.905 39.637 9 AA_DG9DG10:DC11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _pdbx_initial_refinement_model.accession_code 1QC1 _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'ndb entry BD0015' # _atom_sites.entry_id 1ZFB _atom_sites.fract_transf_matrix[1][1] 0.018643 _atom_sites.fract_transf_matrix[1][2] 0.010763 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021527 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022311 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? -19.923 16.595 15.204 1.00 9.83 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? -21.036 16.681 14.303 1.00 9.86 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? -21.354 18.018 13.672 1.00 9.94 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? -20.986 19.117 14.539 1.00 9.48 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? -20.671 18.278 12.332 1.00 10.45 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? -21.625 18.814 11.411 1.00 11.86 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? -19.589 19.295 12.650 1.00 9.69 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? -20.073 19.999 13.905 1.00 8.78 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? -18.996 20.258 14.867 1.00 7.54 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? -18.238 21.428 14.756 1.00 6.91 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? -18.464 22.204 13.814 1.00 6.34 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? -17.273 21.674 15.672 1.00 6.15 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? -17.042 20.798 16.653 1.00 6.23 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? -16.092 21.083 17.536 1.00 5.63 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? -17.786 19.587 16.771 1.00 6.43 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? -18.743 19.361 15.868 1.00 7.06 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? -21.405 18.621 9.832 1.00 12.78 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? -22.629 19.187 9.206 1.00 12.47 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? -20.974 17.235 9.512 1.00 12.24 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? -20.187 19.589 9.499 1.00 12.61 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? -20.418 20.955 9.177 1.00 12.81 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? -19.117 21.622 8.795 1.00 12.73 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? -18.224 21.597 9.932 1.00 12.92 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? -18.341 20.978 7.644 1.00 12.56 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? -17.655 22.037 6.978 1.00 12.49 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? -17.329 20.112 8.374 1.00 12.59 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? -16.991 21.018 9.544 1.00 12.20 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? -16.409 20.400 10.743 1.00 12.12 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? -15.530 21.167 11.501 1.00 11.76 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? -15.259 22.313 11.109 1.00 11.80 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? -15.000 20.650 12.632 1.00 11.69 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? -15.321 19.409 13.011 1.00 11.57 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? -14.788 18.944 14.145 1.00 11.29 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? -16.204 18.595 12.244 1.00 11.87 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? -16.719 19.125 11.126 1.00 11.70 ? 2 DC A C6 1 ATOM 36 P P . DG A 1 3 ? -17.335 21.950 5.407 1.00 12.58 ? 3 DG A P 1 ATOM 37 O OP1 . DG A 1 3 ? -18.458 22.653 4.742 1.00 12.71 ? 3 DG A OP1 1 ATOM 38 O OP2 . DG A 1 3 ? -16.989 20.560 5.013 1.00 12.32 ? 3 DG A OP2 1 ATOM 39 O "O5'" . DG A 1 3 ? -16.035 22.863 5.270 1.00 11.84 ? 3 DG A "O5'" 1 ATOM 40 C "C5'" . DG A 1 3 ? -16.132 24.266 5.514 1.00 11.06 ? 3 DG A "C5'" 1 ATOM 41 C "C4'" . DG A 1 3 ? -14.810 24.822 5.989 1.00 10.35 ? 3 DG A "C4'" 1 ATOM 42 O "O4'" . DG A 1 3 ? -14.376 24.188 7.215 1.00 10.05 ? 3 DG A "O4'" 1 ATOM 43 C "C3'" . DG A 1 3 ? -13.662 24.662 4.997 1.00 10.07 ? 3 DG A "C3'" 1 ATOM 44 O "O3'" . DG A 1 3 ? -12.915 25.882 5.001 1.00 10.23 ? 3 DG A "O3'" 1 ATOM 45 C "C2'" . DG A 1 3 ? -12.855 23.510 5.574 1.00 9.90 ? 3 DG A "C2'" 1 ATOM 46 C "C1'" . DG A 1 3 ? -13.058 23.679 7.072 1.00 9.51 ? 3 DG A "C1'" 1 ATOM 47 N N9 . DG A 1 3 ? -12.986 22.451 7.862 1.00 9.11 ? 3 DG A N9 1 ATOM 48 C C8 . DG A 1 3 ? -13.641 21.268 7.605 1.00 8.62 ? 3 DG A C8 1 ATOM 49 N N7 . DG A 1 3 ? -13.436 20.361 8.521 1.00 8.23 ? 3 DG A N7 1 ATOM 50 C C5 . DG A 1 3 ? -12.583 20.972 9.428 1.00 8.35 ? 3 DG A C5 1 ATOM 51 C C6 . DG A 1 3 ? -12.049 20.494 10.657 1.00 7.82 ? 3 DG A C6 1 ATOM 52 O O6 . DG A 1 3 ? -12.198 19.390 11.191 1.00 7.59 ? 3 DG A O6 1 ATOM 53 N N1 . DG A 1 3 ? -11.262 21.455 11.276 1.00 8.00 ? 3 DG A N1 1 ATOM 54 C C2 . DG A 1 3 ? -11.010 22.703 10.785 1.00 7.92 ? 3 DG A C2 1 ATOM 55 N N2 . DG A 1 3 ? -10.200 23.467 11.533 1.00 7.57 ? 3 DG A N2 1 ATOM 56 N N3 . DG A 1 3 ? -11.505 23.167 9.649 1.00 8.20 ? 3 DG A N3 1 ATOM 57 C C4 . DG A 1 3 ? -12.281 22.256 9.028 1.00 8.26 ? 3 DG A C4 1 ATOM 58 P P . DC A 1 4 ? -11.710 26.084 3.964 1.00 10.18 ? 4 DC A P 1 ATOM 59 O OP1 . DC A 1 4 ? -11.851 27.454 3.410 1.00 9.91 ? 4 DC A OP1 1 ATOM 60 O OP2 . DC A 1 4 ? -11.679 24.907 3.049 1.00 10.49 ? 4 DC A OP2 1 ATOM 61 O "O5'" . DC A 1 4 ? -10.423 26.080 4.906 1.00 9.42 ? 4 DC A "O5'" 1 ATOM 62 C "C5'" . DC A 1 4 ? -10.397 26.903 6.069 1.00 8.41 ? 4 DC A "C5'" 1 ATOM 63 C "C4'" . DC A 1 4 ? -9.047 26.827 6.740 1.00 7.52 ? 4 DC A "C4'" 1 ATOM 64 O "O4'" . DC A 1 4 ? -9.035 25.664 7.597 1.00 7.41 ? 4 DC A "O4'" 1 ATOM 65 C "C3'" . DC A 1 4 ? -7.870 26.673 5.779 1.00 7.47 ? 4 DC A "C3'" 1 ATOM 66 O "O3'" . DC A 1 4 ? -6.777 27.474 6.232 1.00 7.65 ? 4 DC A "O3'" 1 ATOM 67 C "C2'" . DC A 1 4 ? -7.533 25.193 5.837 1.00 7.15 ? 4 DC A "C2'" 1 ATOM 68 C "C1'" . DC A 1 4 ? -7.986 24.778 7.228 1.00 6.73 ? 4 DC A "C1'" 1 ATOM 69 N N1 . DC A 1 4 ? -8.518 23.413 7.347 1.00 6.25 ? 4 DC A N1 1 ATOM 70 C C2 . DC A 1 4 ? -8.271 22.701 8.526 1.00 6.11 ? 4 DC A C2 1 ATOM 71 O O2 . DC A 1 4 ? -7.598 23.242 9.411 1.00 5.35 ? 4 DC A O2 1 ATOM 72 N N3 . DC A 1 4 ? -8.772 21.448 8.669 1.00 5.38 ? 4 DC A N3 1 ATOM 73 C C4 . DC A 1 4 ? -9.494 20.910 7.683 1.00 5.81 ? 4 DC A C4 1 ATOM 74 N N4 . DC A 1 4 ? -9.983 19.682 7.858 1.00 5.35 ? 4 DC A N4 1 ATOM 75 C C5 . DC A 1 4 ? -9.751 21.614 6.465 1.00 5.61 ? 4 DC A C5 1 ATOM 76 C C6 . DC A 1 4 ? -9.248 22.847 6.341 1.00 6.19 ? 4 DC A C6 1 ATOM 77 P P . DC A 1 5 ? -5.401 27.472 5.412 1.00 7.53 ? 5 DC A P 1 ATOM 78 O OP1 . DC A 1 5 ? -4.714 28.757 5.702 1.00 7.93 ? 5 DC A OP1 1 ATOM 79 O OP2 . DC A 1 5 ? -5.695 27.085 4.009 1.00 7.60 ? 5 DC A OP2 1 ATOM 80 O "O5'" . DC A 1 5 ? -4.561 26.279 6.054 1.00 8.06 ? 5 DC A "O5'" 1 ATOM 81 C "C5'" . DC A 1 5 ? -4.143 26.308 7.410 1.00 7.78 ? 5 DC A "C5'" 1 ATOM 82 C "C4'" . DC A 1 5 ? -3.489 24.993 7.764 1.00 7.68 ? 5 DC A "C4'" 1 ATOM 83 O "O4'" . DC A 1 5 ? -4.465 23.922 7.683 1.00 7.28 ? 5 DC A "O4'" 1 ATOM 84 C "C3'" . DC A 1 5 ? -2.342 24.588 6.828 1.00 7.83 ? 5 DC A "C3'" 1 ATOM 85 O "O3'" . DC A 1 5 ? -1.271 24.027 7.579 1.00 8.32 ? 5 DC A "O3'" 1 ATOM 86 C "C2'" . DC A 1 5 ? -2.913 23.414 6.061 1.00 7.19 ? 5 DC A "C2'" 1 ATOM 87 C "C1'" . DC A 1 5 ? -3.758 22.813 7.164 1.00 6.84 ? 5 DC A "C1'" 1 ATOM 88 N N1 . DC A 1 5 ? -4.715 21.806 6.703 1.00 6.19 ? 5 DC A N1 1 ATOM 89 C C2 . DC A 1 5 ? -5.022 20.744 7.552 1.00 5.95 ? 5 DC A C2 1 ATOM 90 O O2 . DC A 1 5 ? -4.509 20.719 8.688 1.00 5.42 ? 5 DC A O2 1 ATOM 91 N N3 . DC A 1 5 ? -5.867 19.778 7.117 1.00 5.37 ? 5 DC A N3 1 ATOM 92 C C4 . DC A 1 5 ? -6.398 19.860 5.893 1.00 5.67 ? 5 DC A C4 1 ATOM 93 N N4 . DC A 1 5 ? -7.208 18.885 5.491 1.00 4.77 ? 5 DC A N4 1 ATOM 94 C C5 . DC A 1 5 ? -6.119 20.950 5.018 1.00 5.53 ? 5 DC A C5 1 ATOM 95 C C6 . DC A 1 5 ? -5.280 21.893 5.462 1.00 6.03 ? 5 DC A C6 1 ATOM 96 P P . DG A 1 6 ? 0.079 24.865 7.798 1.00 8.38 ? 6 DG A P 1 ATOM 97 O OP1 . DG A 1 6 ? -0.249 25.779 8.913 1.00 8.20 ? 6 DG A OP1 1 ATOM 98 O OP2 . DG A 1 6 ? 0.532 25.402 6.482 1.00 8.32 ? 6 DG A OP2 1 ATOM 99 O "O5'" . DG A 1 6 ? 1.085 23.754 8.322 1.00 7.89 ? 6 DG A "O5'" 1 ATOM 100 C "C5'" . DG A 1 6 ? 1.004 23.316 9.672 1.00 6.83 ? 6 DG A "C5'" 1 ATOM 101 C "C4'" . DG A 1 6 ? 1.187 21.820 9.742 1.00 5.73 ? 6 DG A "C4'" 1 ATOM 102 O "O4'" . DG A 1 6 ? 0.058 21.152 9.134 1.00 5.25 ? 6 DG A "O4'" 1 ATOM 103 C "C3'" . DG A 1 6 ? 2.409 21.324 8.971 1.00 5.39 ? 6 DG A "C3'" 1 ATOM 104 O "O3'" . DG A 1 6 ? 2.868 20.156 9.642 1.00 5.63 ? 6 DG A "O3'" 1 ATOM 105 C "C2'" . DG A 1 6 ? 1.812 20.868 7.657 1.00 5.10 ? 6 DG A "C2'" 1 ATOM 106 C "C1'" . DG A 1 6 ? 0.571 20.205 8.214 1.00 4.98 ? 6 DG A "C1'" 1 ATOM 107 N N9 . DG A 1 6 ? -0.453 19.947 7.215 1.00 4.79 ? 6 DG A N9 1 ATOM 108 C C8 . DG A 1 6 ? -0.691 20.662 6.069 1.00 4.93 ? 6 DG A C8 1 ATOM 109 N N7 . DG A 1 6 ? -1.666 20.172 5.357 1.00 4.55 ? 6 DG A N7 1 ATOM 110 C C5 . DG A 1 6 ? -2.100 19.076 6.086 1.00 4.34 ? 6 DG A C5 1 ATOM 111 C C6 . DG A 1 6 ? -3.128 18.161 5.817 1.00 4.12 ? 6 DG A C6 1 ATOM 112 O O6 . DG A 1 6 ? -3.886 18.150 4.865 1.00 4.34 ? 6 DG A O6 1 ATOM 113 N N1 . DG A 1 6 ? -3.228 17.190 6.804 1.00 4.17 ? 6 DG A N1 1 ATOM 114 C C2 . DG A 1 6 ? -2.438 17.116 7.924 1.00 3.88 ? 6 DG A C2 1 ATOM 115 N N2 . DG A 1 6 ? -2.689 16.093 8.761 1.00 3.54 ? 6 DG A N2 1 ATOM 116 N N3 . DG A 1 6 ? -1.475 17.980 8.194 1.00 4.23 ? 6 DG A N3 1 ATOM 117 C C4 . DG A 1 6 ? -1.363 18.924 7.236 1.00 4.33 ? 6 DG A C4 1 ATOM 118 P P . DG A 1 7 ? 4.144 20.250 10.601 1.00 5.29 ? 7 DG A P 1 ATOM 119 O OP1 . DG A 1 7 ? 4.006 21.400 11.524 1.00 5.40 ? 7 DG A OP1 1 ATOM 120 O OP2 . DG A 1 7 ? 5.317 20.166 9.692 1.00 5.21 ? 7 DG A OP2 1 ATOM 121 O "O5'" . DG A 1 7 ? 4.022 18.900 11.442 1.00 4.64 ? 7 DG A "O5'" 1 ATOM 122 C "C5'" . DG A 1 7 ? 2.889 18.648 12.271 1.00 4.51 ? 7 DG A "C5'" 1 ATOM 123 C "C4'" . DG A 1 7 ? 2.594 17.166 12.324 1.00 3.80 ? 7 DG A "C4'" 1 ATOM 124 O "O4'" . DG A 1 7 ? 1.745 16.804 11.212 1.00 3.60 ? 7 DG A "O4'" 1 ATOM 125 C "C3'" . DG A 1 7 ? 3.814 16.254 12.214 1.00 4.24 ? 7 DG A "C3'" 1 ATOM 126 O "O3'" . DG A 1 7 ? 3.537 15.080 12.984 1.00 4.73 ? 7 DG A "O3'" 1 ATOM 127 C "C2'" . DG A 1 7 ? 3.872 15.958 10.723 1.00 3.62 ? 7 DG A "C2'" 1 ATOM 128 C "C1'" . DG A 1 7 ? 2.390 15.862 10.374 1.00 3.05 ? 7 DG A "C1'" 1 ATOM 129 N N9 . DG A 1 7 ? 1.986 16.191 9.010 1.00 2.23 ? 7 DG A N9 1 ATOM 130 C C8 . DG A 1 7 ? 2.336 17.313 8.301 1.00 2.06 ? 7 DG A C8 1 ATOM 131 N N7 . DG A 1 7 ? 1.763 17.381 7.129 1.00 1.52 ? 7 DG A N7 1 ATOM 132 C C5 . DG A 1 7 ? 1.004 16.223 7.051 1.00 1.52 ? 7 DG A C5 1 ATOM 133 C C6 . DG A 1 7 ? 0.146 15.765 6.025 1.00 1.42 ? 7 DG A C6 1 ATOM 134 O O6 . DG A 1 7 ? -0.119 16.304 4.948 1.00 1.38 ? 7 DG A O6 1 ATOM 135 N N1 . DG A 1 7 ? -0.439 14.549 6.351 1.00 1.00 ? 7 DG A N1 1 ATOM 136 C C2 . DG A 1 7 ? -0.230 13.856 7.515 1.00 1.00 ? 7 DG A C2 1 ATOM 137 N N2 . DG A 1 7 ? -0.882 12.681 7.614 1.00 1.00 ? 7 DG A N2 1 ATOM 138 N N3 . DG A 1 7 ? 0.557 14.281 8.492 1.00 1.55 ? 7 DG A N3 1 ATOM 139 C C4 . DG A 1 7 ? 1.141 15.466 8.195 1.00 1.56 ? 7 DG A C4 1 ATOM 140 P P . DC A 1 8 ? 4.737 14.120 13.450 1.00 4.95 ? 8 DC A P 1 ATOM 141 O OP1 . DC A 1 8 ? 4.378 13.606 14.797 1.00 4.48 ? 8 DC A OP1 1 ATOM 142 O OP2 . DC A 1 8 ? 6.019 14.856 13.256 1.00 4.69 ? 8 DC A OP2 1 ATOM 143 O "O5'" . DC A 1 8 ? 4.630 12.901 12.432 1.00 5.41 ? 8 DC A "O5'" 1 ATOM 144 C "C5'" . DC A 1 8 ? 3.406 12.181 12.321 1.00 5.98 ? 8 DC A "C5'" 1 ATOM 145 C "C4'" . DC A 1 8 ? 3.387 11.362 11.053 1.00 6.98 ? 8 DC A "C4'" 1 ATOM 146 O "O4'" . DC A 1 8 ? 3.113 12.215 9.919 1.00 6.99 ? 8 DC A "O4'" 1 ATOM 147 C "C3'" . DC A 1 8 ? 4.695 10.629 10.742 1.00 7.65 ? 8 DC A "C3'" 1 ATOM 148 O "O3'" . DC A 1 8 ? 4.379 9.256 10.533 1.00 9.32 ? 8 DC A "O3'" 1 ATOM 149 C "C2'" . DC A 1 8 ? 5.157 11.249 9.434 1.00 7.43 ? 8 DC A "C2'" 1 ATOM 150 C "C1'" . DC A 1 8 ? 3.837 11.701 8.823 1.00 6.57 ? 8 DC A "C1'" 1 ATOM 151 N N1 . DC A 1 8 ? 3.909 12.761 7.810 1.00 5.63 ? 8 DC A N1 1 ATOM 152 C C2 . DC A 1 8 ? 3.116 12.653 6.660 1.00 4.98 ? 8 DC A C2 1 ATOM 153 O O2 . DC A 1 8 ? 2.374 11.662 6.522 1.00 3.68 ? 8 DC A O2 1 ATOM 154 N N3 . DC A 1 8 ? 3.177 13.631 5.727 1.00 4.80 ? 8 DC A N3 1 ATOM 155 C C4 . DC A 1 8 ? 3.983 14.678 5.907 1.00 5.11 ? 8 DC A C4 1 ATOM 156 N N4 . DC A 1 8 ? 4.018 15.613 4.958 1.00 5.21 ? 8 DC A N4 1 ATOM 157 C C5 . DC A 1 8 ? 4.795 14.812 7.068 1.00 5.39 ? 8 DC A C5 1 ATOM 158 C C6 . DC A 1 8 ? 4.729 13.839 7.983 1.00 5.66 ? 8 DC A C6 1 ATOM 159 P P . DG A 1 9 ? 5.158 8.105 11.337 1.00 10.29 ? 9 DG A P 1 ATOM 160 O OP1 . DG A 1 9 ? 4.355 7.808 12.543 1.00 10.35 ? 9 DG A OP1 1 ATOM 161 O OP2 . DG A 1 9 ? 6.585 8.461 11.478 1.00 10.48 ? 9 DG A OP2 1 ATOM 162 O "O5'" . DG A 1 9 ? 5.014 6.884 10.324 1.00 10.55 ? 9 DG A "O5'" 1 ATOM 163 C "C5'" . DG A 1 9 ? 3.736 6.559 9.774 1.00 11.77 ? 9 DG A "C5'" 1 ATOM 164 C "C4'" . DG A 1 9 ? 3.857 6.181 8.315 1.00 11.97 ? 9 DG A "C4'" 1 ATOM 165 O "O4'" . DG A 1 9 ? 3.938 7.355 7.474 1.00 12.16 ? 9 DG A "O4'" 1 ATOM 166 C "C3'" . DG A 1 9 ? 5.072 5.325 7.953 1.00 12.30 ? 9 DG A "C3'" 1 ATOM 167 O "O3'" . DG A 1 9 ? 4.687 4.372 6.965 1.00 12.68 ? 9 DG A "O3'" 1 ATOM 168 C "C2'" . DG A 1 9 ? 6.010 6.312 7.285 1.00 12.36 ? 9 DG A "C2'" 1 ATOM 169 C "C1'" . DG A 1 9 ? 4.994 7.160 6.546 1.00 12.13 ? 9 DG A "C1'" 1 ATOM 170 N N9 . DG A 1 9 ? 5.484 8.468 6.129 1.00 12.19 ? 9 DG A N9 1 ATOM 171 C C8 . DG A 1 9 ? 6.509 9.198 6.678 1.00 12.09 ? 9 DG A C8 1 ATOM 172 N N7 . DG A 1 9 ? 6.711 10.334 6.066 1.00 12.07 ? 9 DG A N7 1 ATOM 173 C C5 . DG A 1 9 ? 5.760 10.355 5.057 1.00 12.10 ? 9 DG A C5 1 ATOM 174 C C6 . DG A 1 9 ? 5.503 11.325 4.047 1.00 12.18 ? 9 DG A C6 1 ATOM 175 O O6 . DG A 1 9 ? 6.061 12.417 3.858 1.00 12.25 ? 9 DG A O6 1 ATOM 176 N N1 . DG A 1 9 ? 4.472 10.920 3.206 1.00 12.04 ? 9 DG A N1 1 ATOM 177 C C2 . DG A 1 9 ? 3.774 9.743 3.321 1.00 11.83 ? 9 DG A C2 1 ATOM 178 N N2 . DG A 1 9 ? 2.816 9.525 2.411 1.00 12.18 ? 9 DG A N2 1 ATOM 179 N N3 . DG A 1 9 ? 3.996 8.839 4.259 1.00 11.88 ? 9 DG A N3 1 ATOM 180 C C4 . DG A 1 9 ? 4.995 9.209 5.084 1.00 12.07 ? 9 DG A C4 1 ATOM 181 P P . DG A 1 10 ? 4.333 2.873 7.406 1.00 13.13 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? 3.234 2.964 8.403 1.00 13.19 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? 5.611 2.206 7.782 1.00 13.29 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? 3.748 2.241 6.068 1.00 12.69 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? 2.736 2.914 5.323 1.00 11.92 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? 3.128 2.992 3.866 1.00 11.51 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? 3.849 4.221 3.618 1.00 11.29 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? 4.047 1.861 3.408 1.00 10.97 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? 3.637 1.436 2.102 1.00 10.84 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? 5.421 2.505 3.407 1.00 11.11 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? 5.090 3.929 2.992 1.00 11.12 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? 6.046 4.938 3.436 1.00 10.58 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? 6.900 4.857 4.508 1.00 10.69 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? 7.614 5.937 4.676 1.00 10.78 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? 7.215 6.777 3.646 1.00 10.40 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? 7.633 8.099 3.320 1.00 10.29 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? 8.470 8.805 3.891 1.00 9.80 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? 6.965 8.586 2.198 1.00 9.96 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? 6.019 7.894 1.485 1.00 9.84 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? 5.504 8.533 0.431 1.00 9.72 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? 5.615 6.666 1.784 1.00 10.19 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? 6.253 6.172 2.866 1.00 10.43 ? 10 DG A C4 1 ATOM 203 O "O5'" . DC B 1 1 ? 9.550 15.928 -4.396 1.00 16.10 ? 11 DC B "O5'" 1 ATOM 204 C "C5'" . DC B 1 1 ? 9.530 14.788 -3.521 1.00 15.90 ? 11 DC B "C5'" 1 ATOM 205 C "C4'" . DC B 1 1 ? 8.359 13.880 -3.811 1.00 15.88 ? 11 DC B "C4'" 1 ATOM 206 O "O4'" . DC B 1 1 ? 8.336 12.779 -2.873 1.00 15.23 ? 11 DC B "O4'" 1 ATOM 207 C "C3'" . DC B 1 1 ? 6.992 14.555 -3.712 1.00 16.09 ? 11 DC B "C3'" 1 ATOM 208 O "O3'" . DC B 1 1 ? 6.137 14.075 -4.751 1.00 17.00 ? 11 DC B "O3'" 1 ATOM 209 C "C2'" . DC B 1 1 ? 6.477 14.141 -2.345 1.00 15.60 ? 11 DC B "C2'" 1 ATOM 210 C "C1'" . DC B 1 1 ? 7.163 12.808 -2.077 1.00 14.65 ? 11 DC B "C1'" 1 ATOM 211 N N1 . DC B 1 1 ? 7.588 12.622 -0.682 1.00 13.77 ? 11 DC B N1 1 ATOM 212 C C2 . DC B 1 1 ? 7.247 11.440 -0.030 1.00 12.93 ? 11 DC B C2 1 ATOM 213 O O2 . DC B 1 1 ? 6.579 10.606 -0.645 1.00 13.22 ? 11 DC B O2 1 ATOM 214 N N3 . DC B 1 1 ? 7.654 11.242 1.246 1.00 12.42 ? 11 DC B N3 1 ATOM 215 C C4 . DC B 1 1 ? 8.378 12.180 1.865 1.00 12.34 ? 11 DC B C4 1 ATOM 216 N N4 . DC B 1 1 ? 8.778 11.947 3.118 1.00 11.66 ? 11 DC B N4 1 ATOM 217 C C5 . DC B 1 1 ? 8.729 13.402 1.226 1.00 12.55 ? 11 DC B C5 1 ATOM 218 C C6 . DC B 1 1 ? 8.315 13.581 -0.035 1.00 12.88 ? 11 DC B C6 1 ATOM 219 P P . DC B 1 2 ? 4.907 14.981 -5.249 1.00 17.91 ? 12 DC B P 1 ATOM 220 O OP1 . DC B 1 2 ? 5.071 15.192 -6.710 1.00 17.62 ? 12 DC B OP1 1 ATOM 221 O OP2 . DC B 1 2 ? 4.764 16.149 -4.349 1.00 17.75 ? 12 DC B OP2 1 ATOM 222 O "O5'" . DC B 1 2 ? 3.638 14.048 -5.033 1.00 17.42 ? 12 DC B "O5'" 1 ATOM 223 C "C5'" . DC B 1 2 ? 3.727 12.638 -5.215 1.00 17.27 ? 12 DC B "C5'" 1 ATOM 224 C "C4'" . DC B 1 2 ? 2.588 11.969 -4.486 1.00 16.73 ? 12 DC B "C4'" 1 ATOM 225 O "O4'" . DC B 1 2 ? 2.941 11.860 -3.087 1.00 16.82 ? 12 DC B "O4'" 1 ATOM 226 C "C3'" . DC B 1 2 ? 1.327 12.829 -4.533 1.00 16.52 ? 12 DC B "C3'" 1 ATOM 227 O "O3'" . DC B 1 2 ? 0.154 12.017 -4.571 1.00 16.12 ? 12 DC B "O3'" 1 ATOM 228 C "C2'" . DC B 1 2 ? 1.375 13.595 -3.225 1.00 16.70 ? 12 DC B "C2'" 1 ATOM 229 C "C1'" . DC B 1 2 ? 1.996 12.571 -2.296 1.00 16.81 ? 12 DC B "C1'" 1 ATOM 230 N N1 . DC B 1 2 ? 2.710 13.170 -1.161 1.00 16.93 ? 12 DC B N1 1 ATOM 231 C C2 . DC B 1 2 ? 3.081 12.356 -0.086 1.00 17.03 ? 12 DC B C2 1 ATOM 232 O O2 . DC B 1 2 ? 2.789 11.152 -0.119 1.00 16.99 ? 12 DC B O2 1 ATOM 233 N N3 . DC B 1 2 ? 3.745 12.899 0.959 1.00 16.86 ? 12 DC B N3 1 ATOM 234 C C4 . DC B 1 2 ? 4.036 14.201 0.956 1.00 17.13 ? 12 DC B C4 1 ATOM 235 N N4 . DC B 1 2 ? 4.693 14.698 2.007 1.00 17.09 ? 12 DC B N4 1 ATOM 236 C C5 . DC B 1 2 ? 3.666 15.056 -0.124 1.00 17.24 ? 12 DC B C5 1 ATOM 237 C C6 . DC B 1 2 ? 3.010 14.504 -1.153 1.00 17.16 ? 12 DC B C6 1 ATOM 238 P P . DG B 1 3 ? -1.278 12.720 -4.742 1.00 15.69 ? 13 DG B P 1 ATOM 239 O OP1 . DG B 1 3 ? -1.935 12.059 -5.896 1.00 15.69 ? 13 DG B OP1 1 ATOM 240 O OP2 . DG B 1 3 ? -1.060 14.191 -4.757 1.00 15.54 ? 13 DG B OP2 1 ATOM 241 O "O5'" . DG B 1 3 ? -2.058 12.362 -3.397 1.00 14.71 ? 13 DG B "O5'" 1 ATOM 242 C "C5'" . DG B 1 3 ? -2.054 11.038 -2.859 1.00 12.88 ? 13 DG B "C5'" 1 ATOM 243 C "C4'" . DG B 1 3 ? -2.634 11.032 -1.461 1.00 11.76 ? 13 DG B "C4'" 1 ATOM 244 O "O4'" . DG B 1 3 ? -1.643 11.533 -0.531 1.00 11.35 ? 13 DG B "O4'" 1 ATOM 245 C "C3'" . DG B 1 3 ? -3.858 11.933 -1.275 1.00 11.09 ? 13 DG B "C3'" 1 ATOM 246 O "O3'" . DG B 1 3 ? -4.733 11.404 -0.265 1.00 10.13 ? 13 DG B "O3'" 1 ATOM 247 C "C2'" . DG B 1 3 ? -3.237 13.211 -0.746 1.00 10.79 ? 13 DG B "C2'" 1 ATOM 248 C "C1'" . DG B 1 3 ? -2.211 12.612 0.195 1.00 10.77 ? 13 DG B "C1'" 1 ATOM 249 N N9 . DG B 1 3 ? -1.135 13.509 0.605 1.00 10.20 ? 13 DG B N9 1 ATOM 250 C C8 . DG B 1 3 ? -0.719 14.658 -0.017 1.00 10.15 ? 13 DG B C8 1 ATOM 251 N N7 . DG B 1 3 ? 0.266 15.250 0.605 1.00 9.84 ? 13 DG B N7 1 ATOM 252 C C5 . DG B 1 3 ? 0.516 14.442 1.704 1.00 10.06 ? 13 DG B C5 1 ATOM 253 C C6 . DG B 1 3 ? 1.510 14.540 2.709 1.00 9.87 ? 13 DG B C6 1 ATOM 254 O O6 . DG B 1 3 ? 2.358 15.434 2.867 1.00 10.25 ? 13 DG B O6 1 ATOM 255 N N1 . DG B 1 3 ? 1.461 13.458 3.586 1.00 9.69 ? 13 DG B N1 1 ATOM 256 C C2 . DG B 1 3 ? 0.566 12.414 3.499 1.00 9.62 ? 13 DG B C2 1 ATOM 257 N N2 . DG B 1 3 ? 0.668 11.439 4.409 1.00 9.11 ? 13 DG B N2 1 ATOM 258 N N3 . DG B 1 3 ? -0.371 12.323 2.573 1.00 9.77 ? 13 DG B N3 1 ATOM 259 C C4 . DG B 1 3 ? -0.338 13.359 1.716 1.00 9.93 ? 13 DG B C4 1 ATOM 260 P P . DC B 1 4 ? -5.893 10.362 -0.666 1.00 9.16 ? 14 DC B P 1 ATOM 261 O OP1 . DC B 1 4 ? -5.354 9.429 -1.692 1.00 9.73 ? 14 DC B OP1 1 ATOM 262 O OP2 . DC B 1 4 ? -7.128 11.127 -0.961 1.00 9.08 ? 14 DC B OP2 1 ATOM 263 O "O5'" . DC B 1 4 ? -6.123 9.534 0.676 1.00 8.25 ? 14 DC B "O5'" 1 ATOM 264 C "C5'" . DC B 1 4 ? -5.228 8.499 1.075 1.00 7.28 ? 14 DC B "C5'" 1 ATOM 265 C "C4'" . DC B 1 4 ? -4.953 8.583 2.559 1.00 6.60 ? 14 DC B "C4'" 1 ATOM 266 O "O4'" . DC B 1 4 ? -4.053 9.682 2.816 1.00 6.35 ? 14 DC B "O4'" 1 ATOM 267 C "C3'" . DC B 1 4 ? -6.176 8.811 3.453 1.00 6.35 ? 14 DC B "C3'" 1 ATOM 268 O "O3'" . DC B 1 4 ? -6.216 7.772 4.431 1.00 6.71 ? 14 DC B "O3'" 1 ATOM 269 C "C2'" . DC B 1 4 ? -5.920 10.160 4.110 1.00 6.28 ? 14 DC B "C2'" 1 ATOM 270 C "C1'" . DC B 1 4 ? -4.413 10.347 4.010 1.00 5.80 ? 14 DC B "C1'" 1 ATOM 271 N N1 . DC B 1 4 ? -3.966 11.739 3.844 1.00 5.32 ? 14 DC B N1 1 ATOM 272 C C2 . DC B 1 4 ? -2.971 12.258 4.684 1.00 4.98 ? 14 DC B C2 1 ATOM 273 O O2 . DC B 1 4 ? -2.527 11.552 5.602 1.00 4.58 ? 14 DC B O2 1 ATOM 274 N N3 . DC B 1 4 ? -2.521 13.518 4.474 1.00 4.39 ? 14 DC B N3 1 ATOM 275 C C4 . DC B 1 4 ? -3.040 14.251 3.487 1.00 4.52 ? 14 DC B C4 1 ATOM 276 N N4 . DC B 1 4 ? -2.569 15.481 3.295 1.00 4.78 ? 14 DC B N4 1 ATOM 277 C C5 . DC B 1 4 ? -4.073 13.757 2.644 1.00 4.67 ? 14 DC B C5 1 ATOM 278 C C6 . DC B 1 4 ? -4.504 12.512 2.857 1.00 4.80 ? 14 DC B C6 1 ATOM 279 P P . DC B 1 5 ? -7.497 7.602 5.390 1.00 7.19 ? 15 DC B P 1 ATOM 280 O OP1 . DC B 1 5 ? -7.353 6.230 5.923 1.00 7.39 ? 15 DC B OP1 1 ATOM 281 O OP2 . DC B 1 5 ? -8.744 7.975 4.685 1.00 7.17 ? 15 DC B OP2 1 ATOM 282 O "O5'" . DC B 1 5 ? -7.252 8.658 6.562 1.00 8.00 ? 15 DC B "O5'" 1 ATOM 283 C "C5'" . DC B 1 5 ? -6.062 8.626 7.346 1.00 8.61 ? 15 DC B "C5'" 1 ATOM 284 C "C4'" . DC B 1 5 ? -6.029 9.815 8.278 1.00 8.83 ? 15 DC B "C4'" 1 ATOM 285 O "O4'" . DC B 1 5 ? -5.630 11.018 7.580 1.00 8.73 ? 15 DC B "O4'" 1 ATOM 286 C "C3'" . DC B 1 5 ? -7.382 10.132 8.912 1.00 9.35 ? 15 DC B "C3'" 1 ATOM 287 O "O3'" . DC B 1 5 ? -7.173 10.399 10.295 1.00 10.18 ? 15 DC B "O3'" 1 ATOM 288 C "C2'" . DC B 1 5 ? -7.804 11.421 8.230 1.00 9.10 ? 15 DC B "C2'" 1 ATOM 289 C "C1'" . DC B 1 5 ? -6.451 12.077 8.044 1.00 8.35 ? 15 DC B "C1'" 1 ATOM 290 N N1 . DC B 1 5 ? -6.434 13.158 7.047 1.00 7.48 ? 15 DC B N1 1 ATOM 291 C C2 . DC B 1 5 ? -5.454 14.147 7.144 1.00 6.74 ? 15 DC B C2 1 ATOM 292 O O2 . DC B 1 5 ? -4.645 14.094 8.079 1.00 5.94 ? 15 DC B O2 1 ATOM 293 N N3 . DC B 1 5 ? -5.421 15.137 6.224 1.00 6.23 ? 15 DC B N3 1 ATOM 294 C C4 . DC B 1 5 ? -6.328 15.169 5.248 1.00 6.50 ? 15 DC B C4 1 ATOM 295 N N4 . DC B 1 5 ? -6.266 16.165 4.362 1.00 5.44 ? 15 DC B N4 1 ATOM 296 C C5 . DC B 1 5 ? -7.344 14.180 5.134 1.00 6.74 ? 15 DC B C5 1 ATOM 297 C C6 . DC B 1 5 ? -7.358 13.201 6.043 1.00 7.24 ? 15 DC B C6 1 ATOM 298 P P . DG B 1 6 ? -8.130 9.732 11.393 1.00 10.63 ? 16 DG B P 1 ATOM 299 O OP1 . DG B 1 6 ? -7.701 8.319 11.560 1.00 10.68 ? 16 DG B OP1 1 ATOM 300 O OP2 . DG B 1 6 ? -9.541 10.048 11.063 1.00 10.62 ? 16 DG B OP2 1 ATOM 301 O "O5'" . DG B 1 6 ? -7.718 10.522 12.708 1.00 9.47 ? 16 DG B "O5'" 1 ATOM 302 C "C5'" . DG B 1 6 ? -6.343 10.722 13.015 1.00 8.14 ? 16 DG B "C5'" 1 ATOM 303 C "C4'" . DG B 1 6 ? -6.120 12.143 13.471 1.00 6.69 ? 16 DG B "C4'" 1 ATOM 304 O "O4'" . DG B 1 6 ? -6.073 13.032 12.327 1.00 5.84 ? 16 DG B "O4'" 1 ATOM 305 C "C3'" . DG B 1 6 ? -7.266 12.665 14.334 1.00 6.42 ? 16 DG B "C3'" 1 ATOM 306 O "O3'" . DG B 1 6 ? -6.729 13.660 15.198 1.00 7.00 ? 16 DG B "O3'" 1 ATOM 307 C "C2'" . DG B 1 6 ? -8.153 13.359 13.318 1.00 5.62 ? 16 DG B "C2'" 1 ATOM 308 C "C1'" . DG B 1 6 ? -7.073 14.025 12.493 1.00 5.23 ? 16 DG B "C1'" 1 ATOM 309 N N9 . DG B 1 6 ? -7.492 14.475 11.172 1.00 4.09 ? 16 DG B N9 1 ATOM 310 C C8 . DG B 1 6 ? -8.442 13.917 10.350 1.00 3.90 ? 16 DG B C8 1 ATOM 311 N N7 . DG B 1 6 ? -8.590 14.566 9.228 1.00 3.50 ? 16 DG B N7 1 ATOM 312 C C5 . DG B 1 6 ? -7.684 15.616 9.317 1.00 3.28 ? 16 DG B C5 1 ATOM 313 C C6 . DG B 1 6 ? -7.411 16.671 8.413 1.00 2.84 ? 16 DG B C6 1 ATOM 314 O O6 . DG B 1 6 ? -7.927 16.886 7.312 1.00 2.91 ? 16 DG B O6 1 ATOM 315 N N1 . DG B 1 6 ? -6.425 17.529 8.905 1.00 2.40 ? 16 DG B N1 1 ATOM 316 C C2 . DG B 1 6 ? -5.791 17.386 10.121 1.00 2.06 ? 16 DG B C2 1 ATOM 317 N N2 . DG B 1 6 ? -4.875 18.310 10.441 1.00 1.79 ? 16 DG B N2 1 ATOM 318 N N3 . DG B 1 6 ? -6.041 16.406 10.970 1.00 2.61 ? 16 DG B N3 1 ATOM 319 C C4 . DG B 1 6 ? -6.994 15.567 10.509 1.00 3.45 ? 16 DG B C4 1 ATOM 320 P P . DG B 1 7 ? -7.090 13.641 16.757 1.00 7.39 ? 17 DG B P 1 ATOM 321 O OP1 . DG B 1 7 ? -6.349 12.524 17.370 1.00 7.42 ? 17 DG B OP1 1 ATOM 322 O OP2 . DG B 1 7 ? -8.568 13.722 16.878 1.00 7.72 ? 17 DG B OP2 1 ATOM 323 O "O5'" . DG B 1 7 ? -6.418 14.984 17.276 1.00 7.20 ? 17 DG B "O5'" 1 ATOM 324 C "C5'" . DG B 1 7 ? -5.064 15.274 16.936 1.00 7.01 ? 17 DG B "C5'" 1 ATOM 325 C "C4'" . DG B 1 7 ? -4.866 16.764 16.795 1.00 7.23 ? 17 DG B "C4'" 1 ATOM 326 O "O4'" . DG B 1 7 ? -5.337 17.226 15.507 1.00 6.89 ? 17 DG B "O4'" 1 ATOM 327 C "C3'" . DG B 1 7 ? -5.596 17.613 17.831 1.00 7.49 ? 17 DG B "C3'" 1 ATOM 328 O "O3'" . DG B 1 7 ? -4.743 18.714 18.154 1.00 8.63 ? 17 DG B "O3'" 1 ATOM 329 C "C2'" . DG B 1 7 ? -6.844 18.062 17.088 1.00 7.17 ? 17 DG B "C2'" 1 ATOM 330 C "C1'" . DG B 1 7 ? -6.310 18.245 15.677 1.00 6.42 ? 17 DG B "C1'" 1 ATOM 331 N N9 . DG B 1 7 ? -7.283 18.073 14.605 1.00 5.80 ? 17 DG B N9 1 ATOM 332 C C8 . DG B 1 7 ? -8.225 17.077 14.490 1.00 5.02 ? 17 DG B C8 1 ATOM 333 N N7 . DG B 1 7 ? -8.901 17.143 13.375 1.00 5.21 ? 17 DG B N7 1 ATOM 334 C C5 . DG B 1 7 ? -8.386 18.253 12.719 1.00 4.42 ? 17 DG B C5 1 ATOM 335 C C6 . DG B 1 7 ? -8.733 18.831 11.469 1.00 4.33 ? 17 DG B C6 1 ATOM 336 O O6 . DG B 1 7 ? -9.534 18.421 10.627 1.00 3.62 ? 17 DG B O6 1 ATOM 337 N N1 . DG B 1 7 ? -8.025 20.003 11.231 1.00 3.94 ? 17 DG B N1 1 ATOM 338 C C2 . DG B 1 7 ? -7.095 20.545 12.076 1.00 4.42 ? 17 DG B C2 1 ATOM 339 N N2 . DG B 1 7 ? -6.552 21.712 11.687 1.00 3.99 ? 17 DG B N2 1 ATOM 340 N N3 . DG B 1 7 ? -6.729 19.995 13.219 1.00 4.76 ? 17 DG B N3 1 ATOM 341 C C4 . DG B 1 7 ? -7.410 18.859 13.478 1.00 5.18 ? 17 DG B C4 1 ATOM 342 P P . DC B 1 8 ? -5.140 19.714 19.345 1.00 9.56 ? 18 DC B P 1 ATOM 343 O OP1 . DC B 1 8 ? -3.873 20.127 19.991 1.00 9.52 ? 18 DC B OP1 1 ATOM 344 O OP2 . DC B 1 8 ? -6.194 19.047 20.144 1.00 9.07 ? 18 DC B OP2 1 ATOM 345 O "O5'" . DC B 1 8 ? -5.720 20.983 18.583 1.00 9.68 ? 18 DC B "O5'" 1 ATOM 346 C "C5'" . DC B 1 8 ? -4.933 21.626 17.585 1.00 9.57 ? 18 DC B "C5'" 1 ATOM 347 C "C4'" . DC B 1 8 ? -5.748 22.682 16.878 1.00 9.44 ? 18 DC B "C4'" 1 ATOM 348 O "O4'" . DC B 1 8 ? -6.676 22.060 15.962 1.00 9.07 ? 18 DC B "O4'" 1 ATOM 349 C "C3'" . DC B 1 8 ? -6.577 23.559 17.818 1.00 9.54 ? 18 DC B "C3'" 1 ATOM 350 O "O3'" . DC B 1 8 ? -6.298 24.931 17.526 1.00 10.21 ? 18 DC B "O3'" 1 ATOM 351 C "C2'" . DC B 1 8 ? -8.017 23.182 17.509 1.00 9.09 ? 18 DC B "C2'" 1 ATOM 352 C "C1'" . DC B 1 8 ? -7.927 22.717 16.063 1.00 8.85 ? 18 DC B "C1'" 1 ATOM 353 N N1 . DC B 1 8 ? -8.953 21.761 15.632 1.00 8.35 ? 18 DC B N1 1 ATOM 354 C C2 . DC B 1 8 ? -9.433 21.844 14.321 1.00 7.82 ? 18 DC B C2 1 ATOM 355 O O2 . DC B 1 8 ? -9.006 22.738 13.578 1.00 7.70 ? 18 DC B O2 1 ATOM 356 N N3 . DC B 1 8 ? -10.350 20.951 13.897 1.00 7.89 ? 18 DC B N3 1 ATOM 357 C C4 . DC B 1 8 ? -10.791 20.003 14.726 1.00 7.53 ? 18 DC B C4 1 ATOM 358 N N4 . DC B 1 8 ? -11.676 19.134 14.247 1.00 7.50 ? 18 DC B N4 1 ATOM 359 C C5 . DC B 1 8 ? -10.335 19.907 16.075 1.00 8.06 ? 18 DC B C5 1 ATOM 360 C C6 . DC B 1 8 ? -9.425 20.798 16.481 1.00 7.90 ? 18 DC B C6 1 ATOM 361 P P . DG B 1 9 ? -6.518 26.047 18.660 1.00 10.52 ? 19 DG B P 1 ATOM 362 O OP1 . DG B 1 9 ? -5.227 26.749 18.827 1.00 10.98 ? 19 DG B OP1 1 ATOM 363 O OP2 . DG B 1 9 ? -7.157 25.385 19.822 1.00 10.72 ? 19 DG B OP2 1 ATOM 364 O "O5'" . DG B 1 9 ? -7.590 27.037 18.017 1.00 9.84 ? 19 DG B "O5'" 1 ATOM 365 C "C5'" . DG B 1 9 ? -7.709 27.178 16.600 1.00 8.95 ? 19 DG B "C5'" 1 ATOM 366 C "C4'" . DG B 1 9 ? -9.146 27.457 16.218 1.00 7.91 ? 19 DG B "C4'" 1 ATOM 367 O "O4'" . DG B 1 9 ? -9.835 26.220 15.931 1.00 7.12 ? 19 DG B "O4'" 1 ATOM 368 C "C3'" . DG B 1 9 ? -9.990 28.160 17.285 1.00 7.96 ? 19 DG B "C3'" 1 ATOM 369 O "O3'" . DG B 1 9 ? -10.879 29.062 16.635 1.00 8.72 ? 19 DG B "O3'" 1 ATOM 370 C "C2'" . DG B 1 9 ? -10.861 27.046 17.834 1.00 7.49 ? 19 DG B "C2'" 1 ATOM 371 C "C1'" . DG B 1 9 ? -11.109 26.300 16.546 1.00 6.64 ? 19 DG B "C1'" 1 ATOM 372 N N9 . DG B 1 9 ? -11.608 24.942 16.696 1.00 5.95 ? 19 DG B N9 1 ATOM 373 C C8 . DG B 1 9 ? -11.495 24.115 17.785 1.00 5.57 ? 19 DG B C8 1 ATOM 374 N N7 . DG B 1 9 ? -12.032 22.947 17.588 1.00 4.85 ? 19 DG B N7 1 ATOM 375 C C5 . DG B 1 9 ? -12.529 23.011 16.296 1.00 5.10 ? 19 DG B C5 1 ATOM 376 C C6 . DG B 1 9 ? -13.189 22.035 15.522 1.00 5.27 ? 19 DG B C6 1 ATOM 377 O O6 . DG B 1 9 ? -13.477 20.875 15.844 1.00 5.37 ? 19 DG B O6 1 ATOM 378 N N1 . DG B 1 9 ? -13.513 22.519 14.253 1.00 5.00 ? 19 DG B N1 1 ATOM 379 C C2 . DG B 1 9 ? -13.228 23.784 13.792 1.00 4.31 ? 19 DG B C2 1 ATOM 380 N N2 . DG B 1 9 ? -13.623 24.086 12.545 1.00 4.57 ? 19 DG B N2 1 ATOM 381 N N3 . DG B 1 9 ? -12.599 24.696 14.509 1.00 5.05 ? 19 DG B N3 1 ATOM 382 C C4 . DG B 1 9 ? -12.283 24.242 15.739 1.00 5.23 ? 19 DG B C4 1 ATOM 383 P P . DG B 1 10 ? -11.005 30.572 17.159 1.00 9.08 ? 20 DG B P 1 ATOM 384 O OP1 . DG B 1 10 ? -9.678 31.220 17.032 1.00 8.67 ? 20 DG B OP1 1 ATOM 385 O OP2 . DG B 1 10 ? -11.660 30.502 18.489 1.00 8.84 ? 20 DG B OP2 1 ATOM 386 O "O5'" . DG B 1 10 ? -12.023 31.216 16.118 1.00 8.31 ? 20 DG B "O5'" 1 ATOM 387 C "C5'" . DG B 1 10 ? -11.813 31.091 14.713 1.00 7.59 ? 20 DG B "C5'" 1 ATOM 388 C "C4'" . DG B 1 10 ? -13.098 30.694 14.022 1.00 7.11 ? 20 DG B "C4'" 1 ATOM 389 O "O4'" . DG B 1 10 ? -13.403 29.320 14.352 1.00 6.82 ? 20 DG B "O4'" 1 ATOM 390 C "C3'" . DG B 1 10 ? -14.327 31.506 14.430 1.00 6.94 ? 20 DG B "C3'" 1 ATOM 391 O "O3'" . DG B 1 10 ? -15.131 31.759 13.276 1.00 7.06 ? 20 DG B "O3'" 1 ATOM 392 C "C2'" . DG B 1 10 ? -15.070 30.587 15.385 1.00 6.83 ? 20 DG B "C2'" 1 ATOM 393 C "C1'" . DG B 1 10 ? -14.744 29.217 14.812 1.00 6.34 ? 20 DG B "C1'" 1 ATOM 394 N N9 . DG B 1 10 ? -14.798 28.107 15.759 1.00 5.47 ? 20 DG B N9 1 ATOM 395 C C8 . DG B 1 10 ? -14.279 28.065 17.033 1.00 5.66 ? 20 DG B C8 1 ATOM 396 N N7 . DG B 1 10 ? -14.453 26.909 17.616 1.00 5.28 ? 20 DG B N7 1 ATOM 397 C C5 . DG B 1 10 ? -15.133 26.150 16.677 1.00 4.68 ? 20 DG B C5 1 ATOM 398 C C6 . DG B 1 10 ? -15.591 24.804 16.732 1.00 4.48 ? 20 DG B C6 1 ATOM 399 O O6 . DG B 1 10 ? -15.481 23.979 17.653 1.00 4.57 ? 20 DG B O6 1 ATOM 400 N N1 . DG B 1 10 ? -16.239 24.443 15.559 1.00 3.72 ? 20 DG B N1 1 ATOM 401 C C2 . DG B 1 10 ? -16.425 25.261 14.473 1.00 4.00 ? 20 DG B C2 1 ATOM 402 N N2 . DG B 1 10 ? -17.091 24.737 13.445 1.00 3.59 ? 20 DG B N2 1 ATOM 403 N N3 . DG B 1 10 ? -15.995 26.505 14.404 1.00 3.96 ? 20 DG B N3 1 ATOM 404 C C4 . DG B 1 10 ? -15.366 26.881 15.533 1.00 4.97 ? 20 DG B C4 1 HETATM 405 CA CA . CA C 2 . ? -10.705 27.675 11.292 1.00 7.54 ? 21 CA B CA 1 HETATM 406 CA CA . CA D 2 . ? -13.018 15.471 9.443 1.00 19.16 ? 22 CA B CA 1 HETATM 407 O O . HOH E 3 . ? -0.367 8.023 0.626 1.00 1.44 ? 23 HOH A O 1 HETATM 408 O O . HOH E 3 . ? 2.676 19.888 3.056 1.00 3.45 ? 24 HOH A O 1 HETATM 409 O O . HOH E 3 . ? -13.301 17.053 11.377 1.00 9.23 ? 27 HOH A O 1 HETATM 410 O O . HOH E 3 . ? 0.380 18.427 3.862 1.00 8.57 ? 29 HOH A O 1 HETATM 411 O O . HOH E 3 . ? 6.575 23.571 9.192 1.00 12.47 ? 30 HOH A O 1 HETATM 412 O O . HOH E 3 . ? 8.831 14.315 14.354 1.00 12.87 ? 32 HOH A O 1 HETATM 413 O O . HOH E 3 . ? -2.454 14.905 6.683 1.00 9.44 ? 33 HOH A O 1 HETATM 414 O O . HOH E 3 . ? -9.191 26.450 10.194 1.00 9.41 ? 35 HOH A O 1 HETATM 415 O O . HOH E 3 . ? 4.118 23.632 11.301 1.00 14.72 ? 37 HOH A O 1 HETATM 416 O O . HOH E 3 . ? 0.454 13.295 11.438 1.00 8.02 ? 40 HOH A O 1 HETATM 417 O O . HOH E 3 . ? 1.996 7.925 0.050 1.00 16.18 ? 43 HOH A O 1 HETATM 418 O O . HOH E 3 . ? -16.903 21.900 20.663 1.00 3.74 ? 44 HOH A O 1 HETATM 419 O O . HOH E 3 . ? -15.235 15.015 10.417 1.00 5.75 ? 45 HOH A O 1 HETATM 420 O O . HOH E 3 . ? 0.127 3.515 1.054 1.00 12.24 ? 48 HOH A O 1 HETATM 421 O O . HOH E 3 . ? -3.597 19.111 8.112 1.00 12.03 ? 50 HOH A O 1 HETATM 422 O O . HOH E 3 . ? 7.245 9.967 14.267 1.00 17.86 ? 51 HOH A O 1 HETATM 423 O O . HOH E 3 . ? -7.471 19.419 8.509 1.00 7.24 ? 52 HOH A O 1 HETATM 424 O O . HOH E 3 . ? -0.097 10.341 10.013 1.00 18.80 ? 56 HOH A O 1 HETATM 425 O O . HOH E 3 . ? 0.549 10.971 7.525 1.00 16.86 ? 60 HOH A O 1 HETATM 426 O O . HOH E 3 . ? 0.008 0.013 0.087 0.33 16.41 ? 64 HOH A O 1 HETATM 427 O O . HOH E 3 . ? -2.979 25.317 10.438 1.00 12.77 ? 66 HOH A O 1 HETATM 428 O O . HOH E 3 . ? 2.475 1.285 -2.638 1.00 21.37 ? 68 HOH A O 1 HETATM 429 O O . HOH E 3 . ? 3.303 18.696 5.175 1.00 12.74 ? 69 HOH A O 1 HETATM 430 O O . HOH E 3 . ? -3.032 26.781 3.541 1.00 9.47 ? 70 HOH A O 1 HETATM 431 O O . HOH E 3 . ? 6.034 18.263 8.751 1.00 19.20 ? 71 HOH A O 1 HETATM 432 O O . HOH E 3 . ? -11.756 22.125 2.525 1.00 12.65 ? 72 HOH A O 1 HETATM 433 O O . HOH E 3 . ? -15.252 15.397 7.572 1.00 12.01 ? 74 HOH A O 1 HETATM 434 O O . HOH E 3 . ? 0.455 20.887 2.048 1.00 9.74 ? 76 HOH A O 1 HETATM 435 O O . HOH E 3 . ? 4.764 25.352 13.512 1.00 12.76 ? 77 HOH A O 1 HETATM 436 O O . HOH E 3 . ? -0.001 30.967 1.390 0.33 14.14 ? 79 HOH A O 1 HETATM 437 O O . HOH E 3 . ? -13.953 17.290 8.192 1.00 11.43 ? 80 HOH A O 1 HETATM 438 O O . HOH E 3 . ? -3.534 28.053 9.227 1.00 12.52 ? 84 HOH A O 1 HETATM 439 O O . HOH E 3 . ? 8.706 8.013 1.480 1.00 20.36 ? 85 HOH A O 1 HETATM 440 O O . HOH E 3 . ? -5.242 24.898 3.672 1.00 16.97 ? 86 HOH A O 1 HETATM 441 O O . HOH E 3 . ? 0.011 0.020 3.742 0.33 15.29 ? 88 HOH A O 1 HETATM 442 O O . HOH E 3 . ? 0.004 0.007 -5.157 0.33 13.50 ? 89 HOH A O 1 HETATM 443 O O . HOH E 3 . ? -4.300 30.561 6.878 1.00 16.33 ? 90 HOH A O 1 HETATM 444 O O . HOH E 3 . ? 1.700 8.987 7.271 1.00 13.02 ? 92 HOH A O 1 HETATM 445 O O . HOH E 3 . ? 7.614 7.980 15.588 1.00 13.38 ? 93 HOH A O 1 HETATM 446 O O . HOH E 3 . ? -1.889 26.452 11.760 1.00 13.46 ? 94 HOH A O 1 HETATM 447 O O . HOH E 3 . ? -22.630 21.642 11.933 1.00 15.05 ? 95 HOH A O 1 HETATM 448 O O . HOH E 3 . ? 0.293 18.158 14.061 1.00 13.59 ? 101 HOH A O 1 HETATM 449 O O . HOH E 3 . ? 5.347 19.735 2.881 1.00 15.19 ? 103 HOH A O 1 HETATM 450 O O . HOH E 3 . ? -15.488 22.856 22.089 1.00 16.64 ? 104 HOH A O 1 HETATM 451 O O . HOH E 3 . ? -2.621 22.188 3.083 1.00 15.54 ? 105 HOH A O 1 HETATM 452 O O . HOH F 3 . ? -1.827 16.666 12.926 1.00 1.00 ? 25 HOH B O 1 HETATM 453 O O . HOH F 3 . ? -16.080 24.079 20.115 1.00 1.98 ? 26 HOH B O 1 HETATM 454 O O . HOH F 3 . ? -9.735 9.895 2.621 1.00 3.47 ? 28 HOH B O 1 HETATM 455 O O . HOH F 3 . ? -12.327 26.983 13.343 1.00 12.14 ? 31 HOH B O 1 HETATM 456 O O . HOH F 3 . ? -2.413 18.861 15.116 1.00 12.35 ? 34 HOH B O 1 HETATM 457 O O . HOH F 3 . ? -2.556 6.503 4.108 1.00 6.52 ? 36 HOH B O 1 HETATM 458 O O . HOH F 3 . ? -9.853 26.564 12.877 1.00 11.91 ? 38 HOH B O 1 HETATM 459 O O . HOH F 3 . ? -10.129 29.337 12.138 1.00 10.78 ? 39 HOH B O 1 HETATM 460 O O . HOH F 3 . ? -2.675 19.482 10.088 1.00 13.27 ? 41 HOH B O 1 HETATM 461 O O . HOH F 3 . ? -5.614 28.799 18.324 1.00 18.58 ? 42 HOH B O 1 HETATM 462 O O . HOH F 3 . ? -8.085 10.373 17.159 1.00 5.08 ? 46 HOH B O 1 HETATM 463 O O . HOH F 3 . ? -6.559 33.375 16.588 1.00 4.84 ? 47 HOH B O 1 HETATM 464 O O . HOH F 3 . ? -1.099 28.786 19.469 1.00 8.24 ? 49 HOH B O 1 HETATM 465 O O . HOH F 3 . ? -13.849 23.320 19.795 1.00 17.32 ? 53 HOH B O 1 HETATM 466 O O . HOH F 3 . ? -2.423 16.281 15.479 1.00 13.98 ? 54 HOH B O 1 HETATM 467 O O . HOH F 3 . ? -0.388 8.941 5.061 1.00 11.94 ? 55 HOH B O 1 HETATM 468 O O . HOH F 3 . ? -3.846 20.390 14.358 1.00 4.51 ? 57 HOH B O 1 HETATM 469 O O . HOH F 3 . ? -7.026 24.818 12.891 1.00 12.42 ? 58 HOH B O 1 HETATM 470 O O . HOH F 3 . ? 4.097 18.545 -4.777 1.00 13.01 ? 59 HOH B O 1 HETATM 471 O O . HOH F 3 . ? -10.285 16.924 6.086 1.00 10.44 ? 61 HOH B O 1 HETATM 472 O O . HOH F 3 . ? 0.005 30.961 15.435 0.33 5.10 ? 62 HOH B O 1 HETATM 473 O O . HOH F 3 . ? 0.004 30.961 11.451 0.33 9.61 ? 63 HOH B O 1 HETATM 474 O O . HOH F 3 . ? -5.874 8.438 10.805 1.00 20.58 ? 65 HOH B O 1 HETATM 475 O O . HOH F 3 . ? -2.158 16.324 4.950 1.00 24.32 ? 67 HOH B O 1 HETATM 476 O O . HOH F 3 . ? 10.817 11.334 -3.428 1.00 15.26 ? 73 HOH B O 1 HETATM 477 O O . HOH F 3 . ? -4.034 9.785 13.367 1.00 19.13 ? 75 HOH B O 1 HETATM 478 O O . HOH F 3 . ? -12.395 34.443 16.561 1.00 18.98 ? 78 HOH B O 1 HETATM 479 O O . HOH F 3 . ? -4.956 12.639 -2.977 1.00 20.04 ? 81 HOH B O 1 HETATM 480 O O . HOH F 3 . ? -15.748 24.066 12.329 1.00 18.18 ? 82 HOH B O 1 HETATM 481 O O . HOH F 3 . ? -0.950 13.771 -2.486 1.00 25.31 ? 83 HOH B O 1 HETATM 482 O O . HOH F 3 . ? -14.412 30.583 18.763 1.00 16.82 ? 87 HOH B O 1 HETATM 483 O O . HOH F 3 . ? -8.101 19.294 21.564 1.00 15.79 ? 91 HOH B O 1 HETATM 484 O O . HOH F 3 . ? -8.043 28.576 11.258 1.00 20.67 ? 96 HOH B O 1 HETATM 485 O O . HOH F 3 . ? -3.468 17.655 19.649 1.00 22.19 ? 97 HOH B O 1 HETATM 486 O O . HOH F 3 . ? -15.349 30.423 20.774 1.00 17.50 ? 98 HOH B O 1 HETATM 487 O O . HOH F 3 . ? -10.020 16.307 9.616 1.00 17.72 ? 99 HOH B O 1 HETATM 488 O O . HOH F 3 . ? -14.583 32.948 19.884 1.00 12.16 ? 100 HOH B O 1 HETATM 489 O O . HOH F 3 . ? -10.375 13.136 15.377 1.00 15.20 ? 102 HOH B O 1 HETATM 490 O O . HOH F 3 . ? -3.869 27.898 16.825 1.00 15.76 ? 106 HOH B O 1 #