HEADER DNA 27-FEB-91 1D33 TITLE FORMALDEHYDE CROSS-LINKS DAUNORUBICIN AND DNA EFFICIENTLY: HPLC AND X- TITLE 2 RAY DIFFRACTION STUDIES COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*GP*CP*(G49)P*CP*G)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA EXPDTA X-RAY DIFFRACTION AUTHOR A.H.-J.WANG,Y.-G.GAO,Y.-C.LIAW,Y.-K.LI REVDAT 4 07-FEB-24 1D33 1 REMARK LINK REVDAT 3 24-FEB-09 1D33 1 VERSN REVDAT 2 01-APR-03 1D33 1 JRNL REVDAT 1 15-APR-92 1D33 0 JRNL AUTH A.H.WANG,Y.G.GAO,Y.C.LIAW,Y.K.LI JRNL TITL FORMALDEHYDE CROSS-LINKS DAUNORUBICIN AND DNA EFFICIENTLY: JRNL TITL 2 HPLC AND X-RAY DIFFRACTION STUDIES. JRNL REF BIOCHEMISTRY V. 30 3812 1991 JRNL REFN ISSN 0006-2960 JRNL PMID 2018756 JRNL DOI 10.1021/BI00230A002 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NUCLSQ REMARK 3 AUTHORS : WESTHOF,DUMAS,MORAS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 2229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 121 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 SUGAR-BASE BOND DISTANCE (A) : NULL ; NULL REMARK 3 SUGAR-BASE BOND ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 PHOSPHATE BONDS DISTANCE (A) : NULL ; NULL REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION CONTACT (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION CONTACT (A) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 SUGAR-BASE BONDS (A**2) : NULL ; NULL REMARK 3 SUGAR-BASE ANGLES (A**2) : NULL ; NULL REMARK 3 PHOSPHATE BONDS (A**2) : NULL ; NULL REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1D33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000172638. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 298.00 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : DIFFRACTOMETER REMARK 200 DETECTOR MANUFACTURER : RIGAKU AFC-5R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.00, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.12150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 13.97150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 13.97150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.06075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 13.97150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 13.97150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.18225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 13.97150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 13.97150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 13.06075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 13.97150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 13.97150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.18225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 26.12150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 1690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 27.94300 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 27.94300 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 26.12150 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 71 O HOH A 73 1.45 REMARK 500 O HOH A 71 O HOH A 72 1.46 REMARK 500 O HOH A 23 O HOH A 67 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 42 O HOH A 56 4454 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC A 5 P DC A 5 O5' 0.091 REMARK 500 DC A 5 N3 DC A 5 C4 0.044 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 1 C3' - O3' - P ANGL. DEV. = 11.3 DEGREES REMARK 500 DG A 2 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES REMARK 500 DG A 2 O4' - C1' - N9 ANGL. DEV. = 6.5 DEGREES REMARK 500 DG A 2 C3' - O3' - P ANGL. DEV. = 12.3 DEGREES REMARK 500 DC A 3 C2 - N3 - C4 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC A 3 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES REMARK 500 DC A 5 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES REMARK 500 DC A 5 O4' - C1' - N1 ANGL. DEV. = 9.9 DEGREES REMARK 500 DG A 6 O3' - P - OP1 ANGL. DEV. = 7.7 DEGREES REMARK 500 DG A 6 C6 - N1 - C2 ANGL. DEV. = -3.7 DEGREES REMARK 500 DG A 6 C5 - C6 - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 DG A 6 C5 - C6 - O6 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 A METHYLENE GROUP LINKS THE N3* ATOM OF DAUNOMYCIN REMARK 600 AND N2 G A 4. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DM1 A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 8 DBREF 1D33 A 1 6 PDB 1D33 1D33 1 6 SEQRES 1 A 6 DC DG DC G49 DC DG MODRES 1D33 G49 A 4 DG HET G49 A 4 23 HET DM1 A 7 38 HET MG A 8 1 HETNAM G49 N2-METHYL-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM DM1 DAUNOMYCIN HETNAM MG MAGNESIUM ION HETSYN DM1 DAUNORUBICIN FORMUL 1 G49 C11 H16 N5 O7 P FORMUL 2 DM1 C27 H29 N O10 FORMUL 3 MG MG 2+ FORMUL 4 HOH *65(H2 O) LINK O3' DC A 3 P G49 A 4 1555 1555 1.61 LINK O3' G49 A 4 P DC A 5 1555 1555 1.63 LINK CM2 G49 A 4 N3' DM1 A 7 1555 1555 1.53 SITE 1 AC1 12 DC A 1 DG A 2 DC A 3 G49 A 4 SITE 2 AC1 12 DC A 5 DG A 6 MG A 8 HOH A 29 SITE 3 AC1 12 HOH A 34 HOH A 36 HOH A 60 HOH A 71 SITE 1 AC2 5 DG A 6 DM1 A 7 HOH A 9 HOH A 10 SITE 2 AC2 5 HOH A 11 CRYST1 27.943 27.943 52.243 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035787 0.000000 0.000000 0.00000 SCALE2 0.000000 0.035787 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019141 0.00000 ATOM 1 O5' DC A 1 9.425 19.817 22.485 1.00 13.66 O ATOM 2 C5' DC A 1 9.590 20.946 23.373 1.00 12.53 C ATOM 3 C4' DC A 1 11.040 20.946 23.807 1.00 12.19 C ATOM 4 O4' DC A 1 11.267 19.826 24.612 1.00 11.65 O ATOM 5 C3' DC A 1 12.060 20.840 22.679 1.00 12.06 C ATOM 6 O3' DC A 1 13.175 21.695 22.872 1.00 12.82 O ATOM 7 C2' DC A 1 12.479 19.359 22.694 1.00 11.76 C ATOM 8 C1' DC A 1 12.351 19.018 24.173 1.00 10.68 C ATOM 9 N1 DC A 1 11.968 17.618 24.298 1.00 9.59 N ATOM 10 C2 DC A 1 12.974 16.679 24.408 1.00 9.11 C ATOM 11 O2 DC A 1 14.139 17.062 24.424 1.00 8.99 O ATOM 12 N3 DC A 1 12.605 15.369 24.455 1.00 8.80 N ATOM 13 C4 DC A 1 11.306 14.980 24.434 1.00 8.73 C ATOM 14 N4 DC A 1 11.012 13.684 24.481 1.00 8.49 N ATOM 15 C5 DC A 1 10.266 15.961 24.345 1.00 8.85 C ATOM 16 C6 DC A 1 10.641 17.238 24.298 1.00 9.33 C ATOM 17 P DG A 2 13.726 22.899 21.999 1.00 17.26 P ATOM 18 OP1 DG A 2 14.673 23.595 22.940 1.00 17.34 O ATOM 19 OP2 DG A 2 12.605 23.671 21.420 1.00 16.65 O ATOM 20 O5' DG A 2 14.514 22.097 20.814 1.00 13.46 O ATOM 21 C5' DG A 2 15.718 21.365 21.090 1.00 12.60 C ATOM 22 C4' DG A 2 16.056 20.614 19.831 1.00 12.44 C ATOM 23 O4' DG A 2 15.288 19.418 19.763 1.00 11.71 O ATOM 24 C3' DG A 2 15.766 21.349 18.531 1.00 12.44 C ATOM 25 O3' DG A 2 16.811 21.027 17.606 1.00 14.05 O ATOM 26 C2' DG A 2 14.433 20.770 18.107 1.00 11.91 C ATOM 27 C1' DG A 2 14.754 19.314 18.447 1.00 10.94 C ATOM 28 N9 DG A 2 13.572 18.473 18.332 1.00 9.99 N ATOM 29 C8 DG A 2 12.253 18.800 18.301 1.00 9.67 C ATOM 30 N7 DG A 2 11.451 17.783 18.160 1.00 9.67 N ATOM 31 C5 DG A 2 12.309 16.679 18.066 1.00 9.15 C ATOM 32 C6 DG A 2 12.060 15.307 17.878 1.00 8.96 C ATOM 33 O6 DG A 2 10.965 14.729 17.789 1.00 9.23 O ATOM 34 N1 DG A 2 13.186 14.525 17.867 1.00 8.47 N ATOM 35 C2 DG A 2 14.435 15.059 17.977 1.00 8.30 C ATOM 36 N2 DG A 2 15.458 14.201 17.951 1.00 7.81 N ATOM 37 N3 DG A 2 14.709 16.350 18.118 1.00 8.65 N ATOM 38 C4 DG A 2 13.606 17.087 18.160 1.00 9.29 C ATOM 39 P DC A 3 17.881 21.930 16.854 1.00 21.18 P ATOM 40 OP1 DC A 3 18.406 23.084 17.595 1.00 19.46 O ATOM 41 OP2 DC A 3 16.861 22.360 15.741 1.00 21.64 O ATOM 42 O5' DC A 3 18.948 20.943 16.232 1.00 15.58 O ATOM 43 C5' DC A 3 19.946 20.228 17.016 1.00 14.87 C ATOM 44 C4' DC A 3 19.851 18.795 16.540 1.00 14.15 C ATOM 45 O4' DC A 3 18.512 18.325 16.665 1.00 13.89 O ATOM 46 C3' DC A 3 20.197 18.588 15.067 1.00 13.97 C ATOM 47 O3' DC A 3 21.544 18.261 14.936 1.00 14.04 O ATOM 48 C2' DC A 3 19.314 17.431 14.623 1.00 13.68 C ATOM 49 C1' DC A 3 18.375 17.202 15.725 1.00 13.22 C ATOM 50 N1 DC A 3 16.962 17.101 15.323 1.00 12.39 N ATOM 51 C2 DC A 3 16.503 15.791 15.203 1.00 11.83 C ATOM 52 O2 DC A 3 17.294 14.843 15.333 1.00 12.10 O ATOM 53 N3 DC A 3 15.198 15.626 14.915 1.00 11.53 N ATOM 54 C4 DC A 3 14.324 16.654 14.790 1.00 11.42 C ATOM 55 N4 DC A 3 13.049 16.405 14.534 1.00 11.20 N ATOM 56 C5 DC A 3 14.813 17.990 14.915 1.00 11.67 C ATOM 57 C6 DC A 3 16.106 18.146 15.203 1.00 11.94 C HETATM 58 P G49 A 4 22.243 18.049 13.500 1.00 16.37 P HETATM 59 O1P G49 A 4 23.671 17.878 14.017 1.00 18.21 O HETATM 60 O2P G49 A 4 21.709 18.954 12.549 1.00 17.12 O HETATM 61 O5' G49 A 4 21.787 16.523 13.129 1.00 13.39 O HETATM 62 C5' G49 A 4 22.352 15.416 13.818 1.00 12.63 C HETATM 63 C4' G49 A 4 21.891 14.150 13.134 1.00 12.34 C HETATM 64 O4' G49 A 4 20.491 14.014 13.108 1.00 11.97 O HETATM 65 C3' G49 A 4 22.341 14.078 11.661 1.00 12.34 C HETATM 66 O3' G49 A 4 22.715 12.717 11.363 1.00 13.36 O HETATM 67 C2' G49 A 4 21.131 14.603 10.919 1.00 12.03 C HETATM 68 C1' G49 A 4 20.032 13.966 11.713 1.00 11.20 C HETATM 69 N9 G49 A 4 18.761 14.693 11.655 1.00 10.61 N HETATM 70 C8 G49 A 4 18.549 16.034 11.702 1.00 10.25 C HETATM 71 N7 G49 A 4 17.294 16.366 11.676 1.00 10.29 N HETATM 72 C5 G49 A 4 16.632 15.137 11.593 1.00 9.93 C HETATM 73 C6 G49 A 4 15.246 14.852 11.504 1.00 9.83 C HETATM 74 O6 G49 A 4 14.315 15.651 11.488 1.00 9.78 O HETATM 75 N1 G49 A 4 14.986 13.516 11.415 1.00 9.75 N HETATM 76 C2 G49 A 4 15.961 12.577 11.384 1.00 9.46 C HETATM 77 N2 G49 A 4 15.548 11.300 11.316 1.00 9.84 N HETATM 78 CM2 G49 A 4 16.674 10.386 11.279 1.00 9.99 C HETATM 79 N3 G49 A 4 17.288 12.776 11.441 1.00 9.81 N HETATM 80 C4 G49 A 4 17.520 14.109 11.551 1.00 9.88 C ATOM 81 P DC A 5 23.542 12.432 9.984 1.00 17.12 P ATOM 82 OP1 DC A 5 24.185 11.110 10.213 1.00 18.18 O ATOM 83 OP2 DC A 5 24.149 13.661 9.566 1.00 15.89 O ATOM 84 O5' DC A 5 22.240 12.239 8.934 1.00 13.08 O ATOM 85 C5' DC A 5 21.513 11.001 9.106 1.00 12.09 C ATOM 86 C4' DC A 5 20.385 11.040 8.092 1.00 11.88 C ATOM 87 O4' DC A 5 19.353 11.879 8.631 1.00 11.42 O ATOM 88 C3' DC A 5 20.745 11.602 6.718 1.00 11.66 C ATOM 89 O3' DC A 5 20.130 10.884 5.637 1.00 12.30 O ATOM 90 C2' DC A 5 20.253 13.047 6.818 1.00 11.24 C ATOM 91 C1' DC A 5 18.957 12.742 7.607 1.00 10.58 C ATOM 92 N1 DC A 5 18.286 13.977 7.972 1.00 9.66 N ATOM 93 C2 DC A 5 16.911 13.843 8.176 1.00 8.97 C ATOM 94 O2 DC A 5 16.397 12.725 8.186 1.00 8.91 O ATOM 95 N3 DC A 5 16.196 14.964 8.338 1.00 8.89 N ATOM 96 C4 DC A 5 16.780 16.213 8.375 1.00 8.90 C ATOM 97 N4 DC A 5 15.984 17.291 8.542 1.00 8.94 N ATOM 98 C5 DC A 5 18.166 16.344 8.166 1.00 9.09 C ATOM 99 C6 DC A 5 18.876 15.207 7.962 1.00 9.35 C ATOM 100 P DG A 6 20.929 9.677 4.906 1.00 14.47 P ATOM 101 OP1 DG A 6 21.589 8.651 5.762 1.00 15.13 O ATOM 102 OP2 DG A 6 21.868 10.448 4.075 1.00 16.46 O ATOM 103 O5' DG A 6 19.770 8.925 4.112 1.00 10.44 O ATOM 104 C5' DG A 6 18.803 8.039 4.665 1.00 9.30 C ATOM 105 C4' DG A 6 17.856 7.584 3.594 1.00 9.16 C ATOM 106 O4' DG A 6 16.987 8.620 3.150 1.00 8.92 O ATOM 107 C3' DG A 6 18.554 7.070 2.314 1.00 8.95 C ATOM 108 O3' DG A 6 17.814 5.985 1.802 1.00 9.32 O ATOM 109 C2' DG A 6 18.591 8.313 1.452 1.00 8.59 C ATOM 110 C1' DG A 6 17.255 8.936 1.776 1.00 8.09 C ATOM 111 N9 DG A 6 17.347 10.389 1.729 1.00 7.54 N ATOM 112 C8 DG A 6 18.431 11.205 1.776 1.00 7.18 C ATOM 113 N7 DG A 6 18.127 12.460 1.745 1.00 7.53 N ATOM 114 C5 DG A 6 16.735 12.488 1.661 1.00 7.03 C ATOM 115 C6 DG A 6 15.793 13.552 1.609 1.00 6.71 C ATOM 116 O6 DG A 6 16.090 14.740 1.599 1.00 7.24 O ATOM 117 N1 DG A 6 14.480 13.189 1.546 1.00 6.95 N ATOM 118 C2 DG A 6 14.100 11.870 1.567 1.00 6.67 C ATOM 119 N2 DG A 6 12.795 11.638 1.499 1.00 6.99 N ATOM 120 N3 DG A 6 14.941 10.836 1.609 1.00 6.91 N ATOM 121 C4 DG A 6 16.229 11.216 1.677 1.00 7.06 C TER 122 DG A 6 HETATM 123 C1 DM1 A 7 15.263 18.283 5.005 1.00 9.43 C HETATM 124 C2 DM1 A 7 16.419 19.018 5.052 1.00 9.78 C HETATM 125 C3 DM1 A 7 17.747 18.367 5.057 1.00 10.12 C HETATM 126 C4 DM1 A 7 17.786 16.911 5.015 1.00 9.62 C HETATM 127 O4 DM1 A 7 18.870 16.174 4.979 1.00 10.17 O HETATM 128 C5 DM1 A 7 16.512 16.263 4.979 1.00 9.33 C HETATM 129 C6 DM1 A 7 16.537 14.768 4.916 1.00 8.69 C HETATM 130 O6 DM1 A 7 17.532 14.039 4.895 1.00 9.32 O HETATM 131 C7 DM1 A 7 15.243 14.069 4.911 1.00 8.47 C HETATM 132 C8 DM1 A 7 15.260 12.681 4.885 1.00 8.31 C HETATM 133 O8 DM1 A 7 16.350 11.921 4.906 1.00 8.57 O HETATM 134 C9 DM1 A 7 14.022 12.016 4.827 1.00 8.52 C HETATM 135 C10 DM1 A 7 14.067 10.442 4.869 1.00 9.15 C HETATM 136 O10 DM1 A 7 14.681 10.230 6.217 1.00 9.85 O HETATM 137 C11 DM1 A 7 12.731 9.822 4.744 1.00 9.39 C HETATM 138 C12 DM1 A 7 11.560 10.565 5.303 1.00 9.58 C HETATM 139 O12 DM1 A 7 11.644 10.655 6.776 1.00 9.84 O HETATM 140 C13 DM1 A 7 10.247 9.864 5.068 1.00 9.92 C HETATM 141 O13 DM1 A 7 9.649 10.141 4.023 1.00 11.07 O HETATM 142 C14 DM1 A 7 9.598 8.858 6.045 1.00 10.53 C HETATM 143 C15 DM1 A 7 11.462 12.044 4.796 1.00 9.05 C HETATM 144 C16 DM1 A 7 12.778 12.650 4.832 1.00 8.51 C HETATM 145 C17 DM1 A 7 12.812 14.067 4.848 1.00 8.16 C HETATM 146 O17 DM1 A 7 11.636 14.782 4.812 1.00 8.52 O HETATM 147 C18 DM1 A 7 13.960 14.838 4.895 1.00 8.40 C HETATM 148 C19 DM1 A 7 13.994 16.288 4.921 1.00 8.59 C HETATM 149 O19 DM1 A 7 12.994 17.006 4.911 1.00 9.07 O HETATM 150 C20 DM1 A 7 15.304 16.900 4.953 1.00 8.93 C HETATM 151 C21 DM1 A 7 20.214 16.819 5.141 1.00 10.64 C HETATM 152 C1' DM1 A 7 15.654 9.249 6.405 1.00 10.20 C HETATM 153 C2' DM1 A 7 16.674 9.615 7.450 1.00 10.21 C HETATM 154 C3' DM1 A 7 15.981 9.777 8.813 1.00 10.49 C HETATM 155 N3' DM1 A 7 17.093 10.034 9.848 1.00 10.43 N HETATM 156 C4' DM1 A 7 15.196 8.489 9.132 1.00 10.65 C HETATM 157 O4' DM1 A 7 16.176 7.399 9.284 1.00 11.32 O HETATM 158 C5' DM1 A 7 14.139 8.257 8.066 1.00 10.59 C HETATM 159 O5' DM1 A 7 14.922 7.995 6.765 1.00 10.38 O HETATM 160 C6' DM1 A 7 13.301 6.975 8.166 1.00 10.62 C HETATM 161 MG MG A 8 19.784 14.421 2.643 1.00 23.36 MG HETATM 162 O HOH A 9 18.146 16.459 1.285 1.00 28.11 O HETATM 163 O HOH A 10 22.047 13.298 3.814 1.00 30.61 O HETATM 164 O HOH A 11 21.293 15.782 0.899 1.00 31.42 O HETATM 165 O HOH A 12 16.355 19.309 11.843 1.00 27.60 O HETATM 166 O HOH A 13 11.091 18.076 11.222 1.00 33.85 O HETATM 167 O HOH A 14 22.631 15.251 7.617 1.00 36.88 O HETATM 168 O HOH A 15 9.967 5.209 7.194 1.00 25.29 O HETATM 169 O HOH A 16 8.975 12.038 1.656 1.00 33.24 O HETATM 170 O HOH A 17 11.588 9.397 1.113 1.00 37.78 O HETATM 171 O HOH A 18 13.891 7.967 1.212 1.00 33.91 O HETATM 172 O HOH A 19 17.241 19.817 9.022 1.00 25.48 O HETATM 173 O HOH A 20 14.011 19.401 1.546 1.00 35.54 O HETATM 174 O HOH A 21 20.270 19.474 8.375 1.00 47.77 O HETATM 175 O HOH A 22 24.042 14.497 5.256 1.00 47.18 O HETATM 176 O HOH A 23 21.625 10.060 1.437 1.00 32.88 O HETATM 177 O HOH A 24 22.223 17.730 8.719 1.00 40.17 O HETATM 178 O HOH A 25 13.647 18.507 11.467 1.00 21.09 O HETATM 179 O HOH A 26 6.055 16.774 7.272 1.00 25.88 O HETATM 180 O HOH A 27 10.982 3.800 9.257 1.00 33.48 O HETATM 181 O HOH A 28 6.877 18.498 10.161 1.00 50.44 O HETATM 182 O HOH A 29 19.085 8.453 10.292 1.00 17.51 O HETATM 183 O HOH A 30 13.974 21.416 3.025 1.00 45.47 O HETATM 184 O HOH A 31 21.100 7.430 8.009 1.00 31.67 O HETATM 185 O HOH A 32 19.957 9.892 12.329 1.00 41.78 O HETATM 186 O HOH A 33 19.289 21.287 12.162 1.00 46.81 O HETATM 187 O HOH A 34 15.626 4.585 10.428 1.00 39.07 O HETATM 188 O HOH A 35 9.791 18.758 6.013 1.00 54.07 O HETATM 189 O HOH A 36 16.992 6.282 11.964 1.00 39.81 O HETATM 190 O HOH A 37 10.330 3.513 2.001 1.00 49.45 O HETATM 191 O HOH A 38 9.786 20.731 2.194 1.00 39.61 O HETATM 192 O HOH A 39 9.436 20.287 11.666 1.00 50.14 O HETATM 193 O HOH A 40 9.364 16.299 12.005 1.00 41.35 O HETATM 194 O HOH A 41 24.329 8.701 9.143 1.00 43.50 O HETATM 195 O HOH A 42 6.108 11.935 1.134 1.00 47.04 O HETATM 196 O HOH A 43 28.987 16.285 12.983 1.00 55.56 O HETATM 197 O HOH A 44 26.305 9.928 12.220 1.00 51.94 O HETATM 198 O HOH A 45 26.739 13.516 11.561 1.00 43.35 O HETATM 199 O HOH A 46 14.170 2.817 6.786 1.00 50.83 O HETATM 200 O HOH A 47 24.741 9.439 6.159 1.00 41.68 O HETATM 201 O HOH A 48 13.438 21.804 10.668 1.00 47.27 O HETATM 202 O HOH A 49 27.255 11.823 3.924 1.00 49.24 O HETATM 203 O HOH A 50 14.005 24.263 5.224 1.00 42.56 O HETATM 204 O HOH A 51 28.580 13.611 14.476 1.00 53.13 O HETATM 205 O HOH A 52 26.079 16.506 9.654 1.00 47.28 O HETATM 206 O HOH A 53 10.208 19.513 8.641 1.00 43.37 O HETATM 207 O HOH A 54 24.646 17.146 3.809 1.00 45.72 O HETATM 208 O HOH A 55 24.030 6.080 10.961 1.00 46.27 O HETATM 209 O HOH A 56 3.230 19.572 12.654 1.00 50.94 O HETATM 210 O HOH A 57 25.823 16.009 14.085 1.00 50.38 O HETATM 211 O HOH A 58 12.806 19.882 8.803 1.00 40.25 O HETATM 212 O HOH A 59 12.024 23.084 8.395 1.00 47.68 O HETATM 213 O HOH A 60 18.795 6.365 8.197 1.00 43.05 O HETATM 214 O HOH A 61 16.950 5.510 6.478 1.00 44.29 O HETATM 215 O HOH A 62 23.989 13.846 1.400 1.00 48.55 O HETATM 216 O HOH A 63 19.546 21.977 19.983 1.00 36.83 O HETATM 217 O HOH A 64 7.212 19.577 6.421 1.00 41.10 O HETATM 218 O HOH A 65 11.337 24.143 6.118 1.00 48.26 O HETATM 219 O HOH A 66 21.997 18.348 1.729 1.00 45.14 O HETATM 220 O HOH A 67 21.855 11.770 0.507 1.00 44.12 O HETATM 221 O HOH A 68 14.128 21.105 14.043 1.00 44.36 O HETATM 222 O HOH A 69 25.433 10.898 1.980 1.00 42.46 O HETATM 223 O HOH A 70 11.535 20.326 4.744 1.00 41.18 O HETATM 224 O HOH A 71 13.354 6.692 4.671 1.00 52.77 O HETATM 225 O HOH A 72 12.281 5.714 4.775 1.00 52.73 O HETATM 226 O HOH A 73 14.598 6.326 4.017 1.00 52.72 O CONECT 47 58 CONECT 58 47 59 60 61 CONECT 59 58 CONECT 60 58 CONECT 61 58 62 CONECT 62 61 63 CONECT 63 62 64 65 CONECT 64 63 68 CONECT 65 63 66 67 CONECT 66 65 81 CONECT 67 65 68 CONECT 68 64 67 69 CONECT 69 68 70 80 CONECT 70 69 71 CONECT 71 70 72 CONECT 72 71 73 80 CONECT 73 72 74 75 CONECT 74 73 CONECT 75 73 76 CONECT 76 75 77 79 CONECT 77 76 78 CONECT 78 77 155 CONECT 79 76 80 CONECT 80 69 72 79 CONECT 81 66 CONECT 123 124 150 CONECT 124 123 125 CONECT 125 124 126 CONECT 126 125 127 128 CONECT 127 126 151 CONECT 128 126 129 150 CONECT 129 128 130 131 CONECT 130 129 CONECT 131 129 132 147 CONECT 132 131 133 134 CONECT 133 132 CONECT 134 132 135 144 CONECT 135 134 136 137 CONECT 136 135 152 CONECT 137 135 138 CONECT 138 137 139 140 143 CONECT 139 138 CONECT 140 138 141 142 CONECT 141 140 CONECT 142 140 CONECT 143 138 144 CONECT 144 134 143 145 CONECT 145 144 146 147 CONECT 146 145 CONECT 147 131 145 148 CONECT 148 147 149 150 CONECT 149 148 CONECT 150 123 128 148 CONECT 151 127 CONECT 152 136 153 159 CONECT 153 152 154 CONECT 154 153 155 156 CONECT 155 78 154 CONECT 156 154 157 158 CONECT 157 156 CONECT 158 156 159 160 CONECT 159 152 158 CONECT 160 158 MASTER 304 0 3 0 0 0 5 6 225 1 63 1 END