data_1F69 # _entry.id 1F69 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1F69 pdb_00001f69 10.2210/pdb1f69/pdb NDB BD0039 ? ? RCSB RCSB011294 ? ? WWPDB D_1000011294 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-08-28 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 4 'Structure model' '_struct_conn.ptnr1_symmetry' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1F69 _pdbx_database_status.recvd_initial_deposition_date 2000-06-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1F6C 'B-DNA HEXAMER GGCGCC WITH SPERMINE' unspecified PDB 1F6E 'A-DNA HEXAMER GGCGM5CC' unspecified PDB 1F6I 'E-DNA HEXAMER GGCGM5CC' unspecified PDB 1F6J 'E-DNA HEXAMER GGCGBR5CC' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vargason, J.M.' 1 'Eichman, B.F.' 2 'Ho, P.S.' 3 # _citation.id primary _citation.title 'The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 7 _citation.page_first 758 _citation.page_last 761 _citation.year 2000 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10966645 _citation.pdbx_database_id_DOI 10.1038/78985 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vargason, J.M.' 1 ? primary 'Eichman, B.F.' 2 ? primary 'Ho, P.S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*CP*GP*CP*C)-3') ; 1810.205 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 1 ? ? ? ? 4 water nat water 18.015 18 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DC)(DG)(DC)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GGCGCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'COBALT HEXAMMINE(III)' NCO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DC 6 6 6 DC C A . n B 1 1 DG 1 7 7 DG G B . n B 1 2 DG 2 8 8 DG G B . n B 1 3 DC 3 9 9 DC C B . n B 1 4 DG 4 10 10 DG G B . n B 1 5 DC 5 11 11 DC C B . n B 1 6 DC 6 12 12 DC C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 13 13 MG MO6 A . D 3 NCO 1 14 14 NCO NCO A . E 4 HOH 1 15 15 HOH HOH A . E 4 HOH 2 20 20 HOH HOH A . E 4 HOH 3 22 22 HOH HOH A . E 4 HOH 4 24 24 HOH HOH A . E 4 HOH 5 25 25 HOH HOH A . E 4 HOH 6 26 26 HOH HOH A . E 4 HOH 7 28 13 HOH MO6 A . E 4 HOH 8 32 13 HOH MO6 A . F 4 HOH 1 16 16 HOH HOH B . F 4 HOH 2 17 17 HOH HOH B . F 4 HOH 3 18 18 HOH HOH B . F 4 HOH 4 19 19 HOH HOH B . F 4 HOH 5 21 21 HOH HOH B . F 4 HOH 6 23 23 HOH HOH B . F 4 HOH 7 27 13 HOH MO6 B . F 4 HOH 8 29 13 HOH MO6 B . F 4 HOH 9 30 13 HOH MO6 B . F 4 HOH 10 31 13 HOH MO6 B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement 3.851 ? 2 d*TREK 'data reduction' . ? 3 d*TREK 'data scaling' . ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1F69 _cell.length_a 42.590 _cell.length_b 42.590 _cell.length_c 63.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F69 _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 91 # _exptl.entry_id 1F69 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 67.33 _exptl_crystal.density_Matthews 3.76 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'MGCL2, CO(NH3)6, SPERMINE, SODIUM CACODYLATE, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MGCL2 ? ? ? 1 2 1 'CO(NH3)6' ? ? ? 1 3 1 SPERMINE ? ? ? 1 4 1 'SODIUM CACODYLATE' ? ? ? 1 5 2 MGCL2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1999-01-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1F69 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 500 _reflns.d_resolution_high 2.6 _reflns.number_obs 2026 _reflns.number_all 2026 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.0610000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.0 _reflns.B_iso_Wilson_estimate 42.5 _reflns.pdbx_redundancy 9.5 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.72 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.2510000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 9.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1F69 _refine.ls_number_reflns_obs 1937 _refine.ls_number_reflns_all 1938 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2134000 _refine.ls_R_factor_all 0.2136000 _refine.ls_R_factor_R_work 0.2050000 _refine.ls_R_factor_R_free 0.2790000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 11. _refine.ls_number_reflns_R_free 214 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT, REAL SPACE TRANSLATION/ROTATION/RIGID BODY SEARCH USING A CUSTOM X-PLOR 3.851 SCRIPT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'PARKINSON ET AL.' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 262 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1F69 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1F69 _struct.title 'CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1F69 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, E-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1F69 _struct_ref.pdbx_db_accession 1F69 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1F69 A 1 ? 6 ? 1F69 1 ? 6 ? 1 6 2 1 1F69 B 1 ? 6 ? 1F69 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 N7 ? ? ? 1_555 D NCO . CO ? ? A DG 1 A NCO 14 1_555 ? ? ? ? ? ? ? 1.944 ? ? metalc2 metalc ? ? A DG 1 N7 ? ? ? 7_554 D NCO . CO ? ? A DG 1 A NCO 14 1_555 ? ? ? ? ? ? ? 1.947 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 13 A HOH 28 1_555 ? ? ? ? ? ? ? 2.022 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 13 A HOH 32 1_555 ? ? ? ? ? ? ? 2.017 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 13 B HOH 27 1_555 ? ? ? ? ? ? ? 2.021 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 13 B HOH 29 1_555 ? ? ? ? ? ? ? 2.025 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 13 B HOH 30 1_555 ? ? ? ? ? ? ? 2.012 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 13 B HOH 31 1_555 ? ? ? ? ? ? ? 2.012 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? D NCO . ? A NCO 14 ? 1_555 N1 ? D NCO . ? A NCO 14 ? 1_555 164.8 ? 2 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? D NCO . ? A NCO 14 ? 1_555 N2 ? D NCO . ? A NCO 14 ? 1_555 90.5 ? 3 N1 ? D NCO . ? A NCO 14 ? 1_555 CO ? D NCO . ? A NCO 14 ? 1_555 N2 ? D NCO . ? A NCO 14 ? 1_555 85.0 ? 4 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? D NCO . ? A NCO 14 ? 1_555 N7 ? A DG 1 ? A DG 1 ? 7_554 108.7 ? 5 N1 ? D NCO . ? A NCO 14 ? 1_555 CO ? D NCO . ? A NCO 14 ? 1_555 N7 ? A DG 1 ? A DG 1 ? 7_554 86.4 ? 6 N2 ? D NCO . ? A NCO 14 ? 1_555 CO ? D NCO . ? A NCO 14 ? 1_555 N7 ? A DG 1 ? A DG 1 ? 7_554 103.4 ? 7 O ? E HOH . ? A HOH 28 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? E HOH . ? A HOH 32 ? 1_555 89.7 ? 8 O ? E HOH . ? A HOH 28 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 27 ? 1_555 179.6 ? 9 O ? E HOH . ? A HOH 32 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 27 ? 1_555 89.9 ? 10 O ? E HOH . ? A HOH 28 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 29 ? 1_555 89.8 ? 11 O ? E HOH . ? A HOH 32 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 29 ? 1_555 90.5 ? 12 O ? F HOH . ? B HOH 27 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 29 ? 1_555 90.3 ? 13 O ? E HOH . ? A HOH 28 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 30 ? 1_555 90.2 ? 14 O ? E HOH . ? A HOH 32 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 30 ? 1_555 89.8 ? 15 O ? F HOH . ? B HOH 27 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 30 ? 1_555 89.6 ? 16 O ? F HOH . ? B HOH 29 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 30 ? 1_555 179.7 ? 17 O ? E HOH . ? A HOH 28 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 90.2 ? 18 O ? E HOH . ? A HOH 32 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 179.8 ? 19 O ? F HOH . ? B HOH 27 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 90.2 ? 20 O ? F HOH . ? B HOH 29 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 89.7 ? 21 O ? F HOH . ? B HOH 30 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? F HOH . ? B HOH 31 ? 1_555 90.0 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 13 ? 7 'BINDING SITE FOR RESIDUE MG A 13' AC2 Software A NCO 14 ? 4 'BINDING SITE FOR RESIDUE NCO A 14' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 DG A 4 ? DG A 4 . ? 1_555 ? 2 AC1 7 HOH E . ? HOH A 28 . ? 1_555 ? 3 AC1 7 HOH E . ? HOH A 32 . ? 1_555 ? 4 AC1 7 HOH F . ? HOH B 27 . ? 1_555 ? 5 AC1 7 HOH F . ? HOH B 29 . ? 1_555 ? 6 AC1 7 HOH F . ? HOH B 30 . ? 1_555 ? 7 AC1 7 HOH F . ? HOH B 31 . ? 1_555 ? 8 AC2 4 DG A 1 ? DG A 1 . ? 7_554 ? 9 AC2 4 DG A 1 ? DG A 1 . ? 1_555 ? 10 AC2 4 DG A 2 ? DG A 2 . ? 1_555 ? 11 AC2 4 DC B 5 ? DC B 11 . ? 1_555 ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NCO 14 ? D NCO . 2 1 A HOH 15 ? E HOH . 3 1 B HOH 21 ? F HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 HOH O O N N 72 HOH H1 H N N 73 HOH H2 H N N 74 MG MG MG N N 75 NCO CO CO N N 76 NCO N1 N N N 77 NCO N2 N N N 78 NCO N3 N N N 79 NCO N4 N N N 80 NCO N5 N N N 81 NCO N6 N N N 82 NCO HN11 H N N 83 NCO HN12 H N N 84 NCO HN13 H N N 85 NCO HN21 H N N 86 NCO HN22 H N N 87 NCO HN23 H N N 88 NCO HN31 H N N 89 NCO HN32 H N N 90 NCO HN33 H N N 91 NCO HN41 H N N 92 NCO HN42 H N N 93 NCO HN43 H N N 94 NCO HN51 H N N 95 NCO HN52 H N N 96 NCO HN53 H N N 97 NCO HN61 H N N 98 NCO HN62 H N N 99 NCO HN63 H N N 100 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 NCO CO N1 sing N N 77 NCO CO N2 sing N N 78 NCO CO N3 sing N N 79 NCO CO N4 sing N N 80 NCO CO N5 sing N N 81 NCO CO N6 sing N N 82 NCO N1 HN11 sing N N 83 NCO N1 HN12 sing N N 84 NCO N1 HN13 sing N N 85 NCO N2 HN21 sing N N 86 NCO N2 HN22 sing N N 87 NCO N2 HN23 sing N N 88 NCO N3 HN31 sing N N 89 NCO N3 HN32 sing N N 90 NCO N3 HN33 sing N N 91 NCO N4 HN41 sing N N 92 NCO N4 HN42 sing N N 93 NCO N4 HN43 sing N N 94 NCO N5 HN51 sing N N 95 NCO N5 HN52 sing N N 96 NCO N5 HN53 sing N N 97 NCO N6 HN61 sing N N 98 NCO N6 HN62 sing N N 99 NCO N6 HN63 sing N N 100 # _ndb_struct_conf_na.entry_id 1F69 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 6 1_555 0.012 -0.407 0.244 1.550 -4.824 -0.671 1 A_DG1:DC12_B A 1 ? B 12 ? 19 1 1 A DG 2 1_555 B DC 5 1_555 0.323 -0.445 0.254 3.872 -1.000 -2.851 2 A_DG2:DC11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.229 -0.320 0.308 -0.524 -14.341 -3.903 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 0.208 -0.527 -0.262 1.145 0.981 -5.938 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1 1 A DC 5 1_555 B DG 2 1_555 -0.223 -0.013 0.108 3.336 -9.321 -0.854 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1 1 A DC 6 1_555 B DG 1 1_555 0.643 -0.616 0.109 2.696 -6.631 0.813 6 A_DC6:DG7_B A 6 ? B 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 6 1_555 A DG 2 1_555 B DC 5 1_555 0.410 0.065 3.341 -0.737 5.375 31.645 -0.869 -0.877 3.297 9.767 1.339 32.095 1 AA_DG1DG2:DC11DC12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 -0.806 -0.196 3.521 -2.037 -3.809 33.675 0.328 1.026 3.562 -6.541 3.499 33.943 2 AA_DG2DC3:DG10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 0.407 0.942 3.511 5.527 2.284 39.071 1.101 0.107 3.581 3.390 -8.205 39.508 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 -0.331 0.258 3.333 -4.231 0.692 30.928 0.345 -0.209 3.352 1.289 7.886 31.216 4 AA_DG4DC5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DC 5 1_555 B DG 2 1_555 A DC 6 1_555 B DG 1 1_555 0.444 -0.109 3.315 1.674 6.412 40.872 -0.850 -0.446 3.277 9.109 -2.378 41.383 5 AA_DC5DC6:DG7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? # _atom_sites.entry_id 1F69 _atom_sites.fract_transf_matrix[1][1] 0.023480 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023480 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015798 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 0.876 9.177 -10.659 1.00 24.32 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 2.031 8.758 -9.963 1.00 16.33 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 2.451 9.792 -8.944 1.00 16.33 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 2.308 9.187 -7.638 1.00 17.03 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 3.936 10.111 -9.091 1.00 20.53 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 4.219 11.405 -8.527 1.00 26.22 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 4.575 9.014 -8.263 1.00 22.12 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 3.580 8.799 -7.133 1.00 13.81 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 3.493 7.407 -6.711 1.00 9.30 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 3.634 6.302 -7.515 1.00 11.32 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 3.497 5.173 -6.866 1.00 15.50 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 3.251 5.554 -5.554 1.00 12.26 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 3.014 4.761 -4.393 1.00 15.09 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 2.961 3.526 -4.287 1.00 12.47 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 2.818 5.552 -3.269 1.00 12.23 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 2.840 6.924 -3.258 1.00 11.62 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 2.637 7.486 -2.057 1.00 8.93 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 3.047 7.680 -4.330 1.00 6.23 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 3.248 6.932 -5.437 1.00 12.50 ? 1 DG A C4 1 ATOM 20 P P . DG A 1 2 ? 5.701 12.029 -8.628 1.00 27.57 ? 2 DG A P 1 ATOM 21 O OP1 . DG A 1 2 ? 5.512 13.481 -8.815 1.00 28.30 ? 2 DG A OP1 1 ATOM 22 O OP2 . DG A 1 2 ? 6.533 11.260 -9.592 1.00 20.33 ? 2 DG A OP2 1 ATOM 23 O "O5'" . DG A 1 2 ? 6.302 11.830 -7.169 1.00 15.55 ? 2 DG A "O5'" 1 ATOM 24 C "C5'" . DG A 1 2 ? 5.520 12.162 -6.017 1.00 16.45 ? 2 DG A "C5'" 1 ATOM 25 C "C4'" . DG A 1 2 ? 6.175 11.644 -4.757 1.00 17.04 ? 2 DG A "C4'" 1 ATOM 26 O "O4'" . DG A 1 2 ? 5.868 10.247 -4.551 1.00 16.71 ? 2 DG A "O4'" 1 ATOM 27 C "C3'" . DG A 1 2 ? 7.703 11.735 -4.755 1.00 22.41 ? 2 DG A "C3'" 1 ATOM 28 O "O3'" . DG A 1 2 ? 8.106 11.894 -3.387 1.00 36.44 ? 2 DG A "O3'" 1 ATOM 29 C "C2'" . DG A 1 2 ? 8.103 10.336 -5.179 1.00 19.13 ? 2 DG A "C2'" 1 ATOM 30 C "C1'" . DG A 1 2 ? 7.087 9.547 -4.381 1.00 12.71 ? 2 DG A "C1'" 1 ATOM 31 N N9 . DG A 1 2 ? 6.895 8.169 -4.803 1.00 10.85 ? 2 DG A N9 1 ATOM 32 C C8 . DG A 1 2 ? 6.966 7.654 -6.077 1.00 13.97 ? 2 DG A C8 1 ATOM 33 N N7 . DG A 1 2 ? 6.787 6.359 -6.111 1.00 16.12 ? 2 DG A N7 1 ATOM 34 C C5 . DG A 1 2 ? 6.581 6.006 -4.783 1.00 6.28 ? 2 DG A C5 1 ATOM 35 C C6 . DG A 1 2 ? 6.338 4.747 -4.199 1.00 8.33 ? 2 DG A C6 1 ATOM 36 O O6 . DG A 1 2 ? 6.275 3.643 -4.749 1.00 16.07 ? 2 DG A O6 1 ATOM 37 N N1 . DG A 1 2 ? 6.173 4.842 -2.827 1.00 3.41 ? 2 DG A N1 1 ATOM 38 C C2 . DG A 1 2 ? 6.240 6.004 -2.107 1.00 9.33 ? 2 DG A C2 1 ATOM 39 N N2 . DG A 1 2 ? 6.036 5.894 -0.794 1.00 6.33 ? 2 DG A N2 1 ATOM 40 N N3 . DG A 1 2 ? 6.482 7.187 -2.633 1.00 11.38 ? 2 DG A N3 1 ATOM 41 C C4 . DG A 1 2 ? 6.634 7.113 -3.969 1.00 9.10 ? 2 DG A C4 1 ATOM 42 P P . DC A 1 3 ? 9.068 13.106 -2.959 1.00 35.95 ? 3 DC A P 1 ATOM 43 O OP1 . DC A 1 3 ? 8.339 14.367 -3.272 1.00 35.97 ? 3 DC A OP1 1 ATOM 44 O OP2 . DC A 1 3 ? 10.424 12.869 -3.523 1.00 32.85 ? 3 DC A OP2 1 ATOM 45 O "O5'" . DC A 1 3 ? 9.143 12.928 -1.384 1.00 25.16 ? 3 DC A "O5'" 1 ATOM 46 C "C5'" . DC A 1 3 ? 7.951 12.657 -0.648 1.00 30.21 ? 3 DC A "C5'" 1 ATOM 47 C "C4'" . DC A 1 3 ? 8.218 11.584 0.380 1.00 32.99 ? 3 DC A "C4'" 1 ATOM 48 O "O4'" . DC A 1 3 ? 8.126 10.268 -0.210 1.00 35.63 ? 3 DC A "O4'" 1 ATOM 49 C "C3'" . DC A 1 3 ? 9.609 11.671 1.007 1.00 31.99 ? 3 DC A "C3'" 1 ATOM 50 O "O3'" . DC A 1 3 ? 9.451 11.374 2.394 1.00 35.83 ? 3 DC A "O3'" 1 ATOM 51 C "C2'" . DC A 1 3 ? 10.365 10.533 0.349 1.00 32.72 ? 3 DC A "C2'" 1 ATOM 52 C "C1'" . DC A 1 3 ? 9.261 9.511 0.169 1.00 24.90 ? 3 DC A "C1'" 1 ATOM 53 N N1 . DC A 1 3 ? 9.500 8.501 -0.870 1.00 18.74 ? 3 DC A N1 1 ATOM 54 C C2 . DC A 1 3 ? 9.344 7.143 -0.540 1.00 17.19 ? 3 DC A C2 1 ATOM 55 O O2 . DC A 1 3 ? 9.006 6.833 0.613 1.00 22.97 ? 3 DC A O2 1 ATOM 56 N N3 . DC A 1 3 ? 9.561 6.203 -1.480 1.00 16.14 ? 3 DC A N3 1 ATOM 57 C C4 . DC A 1 3 ? 9.917 6.567 -2.712 1.00 17.55 ? 3 DC A C4 1 ATOM 58 N N4 . DC A 1 3 ? 10.119 5.598 -3.600 1.00 15.35 ? 3 DC A N4 1 ATOM 59 C C5 . DC A 1 3 ? 10.080 7.941 -3.083 1.00 16.34 ? 3 DC A C5 1 ATOM 60 C C6 . DC A 1 3 ? 9.864 8.868 -2.136 1.00 14.49 ? 3 DC A C6 1 ATOM 61 P P . DG A 1 4 ? 10.507 11.946 3.452 1.00 39.51 ? 4 DG A P 1 ATOM 62 O OP1 . DG A 1 4 ? 9.694 12.487 4.561 1.00 37.31 ? 4 DG A OP1 1 ATOM 63 O OP2 . DG A 1 4 ? 11.488 12.823 2.747 1.00 33.41 ? 4 DG A OP2 1 ATOM 64 O "O5'" . DG A 1 4 ? 11.268 10.646 3.965 1.00 33.56 ? 4 DG A "O5'" 1 ATOM 65 C "C5'" . DG A 1 4 ? 10.582 9.619 4.690 1.00 27.01 ? 4 DG A "C5'" 1 ATOM 66 C "C4'" . DG A 1 4 ? 11.504 8.437 4.867 1.00 30.53 ? 4 DG A "C4'" 1 ATOM 67 O "O4'" . DG A 1 4 ? 11.622 7.734 3.607 1.00 32.53 ? 4 DG A "O4'" 1 ATOM 68 C "C3'" . DG A 1 4 ? 12.924 8.887 5.213 1.00 33.57 ? 4 DG A "C3'" 1 ATOM 69 O "O3'" . DG A 1 4 ? 13.580 7.806 5.886 1.00 42.58 ? 4 DG A "O3'" 1 ATOM 70 C "C2'" . DG A 1 4 ? 13.561 8.998 3.843 1.00 31.37 ? 4 DG A "C2'" 1 ATOM 71 C "C1'" . DG A 1 4 ? 12.986 7.745 3.215 1.00 26.40 ? 4 DG A "C1'" 1 ATOM 72 N N9 . DG A 1 4 ? 13.052 7.668 1.762 1.00 16.59 ? 4 DG A N9 1 ATOM 73 C C8 . DG A 1 4 ? 13.258 8.697 0.876 1.00 18.63 ? 4 DG A C8 1 ATOM 74 N N7 . DG A 1 4 ? 13.287 8.298 -0.369 1.00 16.21 ? 4 DG A N7 1 ATOM 75 C C5 . DG A 1 4 ? 13.078 6.928 -0.292 1.00 7.42 ? 4 DG A C5 1 ATOM 76 C C6 . DG A 1 4 ? 12.998 5.965 -1.312 1.00 10.49 ? 4 DG A C6 1 ATOM 77 O O6 . DG A 1 4 ? 13.086 6.138 -2.524 1.00 16.57 ? 4 DG A O6 1 ATOM 78 N N1 . DG A 1 4 ? 12.784 4.687 -0.807 1.00 2.00 ? 4 DG A N1 1 ATOM 79 C C2 . DG A 1 4 ? 12.650 4.388 0.520 1.00 5.89 ? 4 DG A C2 1 ATOM 80 N N2 . DG A 1 4 ? 12.452 3.096 0.819 1.00 5.35 ? 4 DG A N2 1 ATOM 81 N N3 . DG A 1 4 ? 12.708 5.286 1.489 1.00 7.80 ? 4 DG A N3 1 ATOM 82 C C4 . DG A 1 4 ? 12.928 6.526 1.012 1.00 8.33 ? 4 DG A C4 1 ATOM 83 P P . DC A 1 5 ? 14.028 7.978 7.413 1.00 47.01 ? 5 DC A P 1 ATOM 84 O OP1 . DC A 1 5 ? 12.845 8.492 8.159 1.00 52.64 ? 5 DC A OP1 1 ATOM 85 O OP2 . DC A 1 5 ? 15.307 8.741 7.420 1.00 44.52 ? 5 DC A OP2 1 ATOM 86 O "O5'" . DC A 1 5 ? 14.285 6.489 7.904 1.00 41.71 ? 5 DC A "O5'" 1 ATOM 87 C "C5'" . DC A 1 5 ? 13.323 5.459 7.635 1.00 40.60 ? 5 DC A "C5'" 1 ATOM 88 C "C4'" . DC A 1 5 ? 14.013 4.259 7.028 1.00 38.37 ? 5 DC A "C4'" 1 ATOM 89 O "O4'" . DC A 1 5 ? 14.132 4.402 5.594 1.00 36.12 ? 5 DC A "O4'" 1 ATOM 90 C "C3'" . DC A 1 5 ? 15.432 4.039 7.554 1.00 37.53 ? 5 DC A "C3'" 1 ATOM 91 O "O3'" . DC A 1 5 ? 15.568 2.635 7.815 1.00 44.86 ? 5 DC A "O3'" 1 ATOM 92 C "C2'" . DC A 1 5 ? 16.316 4.472 6.396 1.00 36.75 ? 5 DC A "C2'" 1 ATOM 93 C "C1'" . DC A 1 5 ? 15.460 4.117 5.197 1.00 29.15 ? 5 DC A "C1'" 1 ATOM 94 N N1 . DC A 1 5 ? 15.733 4.840 3.936 1.00 25.34 ? 5 DC A N1 1 ATOM 95 C C2 . DC A 1 5 ? 15.747 4.101 2.756 1.00 22.58 ? 5 DC A C2 1 ATOM 96 O O2 . DC A 1 5 ? 15.483 2.891 2.810 1.00 28.49 ? 5 DC A O2 1 ATOM 97 N N3 . DC A 1 5 ? 16.031 4.712 1.587 1.00 22.01 ? 5 DC A N3 1 ATOM 98 C C4 . DC A 1 5 ? 16.266 6.024 1.561 1.00 21.09 ? 5 DC A C4 1 ATOM 99 N N4 . DC A 1 5 ? 16.543 6.576 0.371 1.00 18.87 ? 5 DC A N4 1 ATOM 100 C C5 . DC A 1 5 ? 16.229 6.815 2.745 1.00 14.76 ? 5 DC A C5 1 ATOM 101 C C6 . DC A 1 5 ? 15.967 6.186 3.904 1.00 21.18 ? 5 DC A C6 1 ATOM 102 P P . DC A 1 6 ? 16.728 2.105 8.795 1.00 51.81 ? 6 DC A P 1 ATOM 103 O OP1 . DC A 1 6 ? 16.145 1.086 9.704 1.00 57.73 ? 6 DC A OP1 1 ATOM 104 O OP2 . DC A 1 6 ? 17.442 3.279 9.369 1.00 50.64 ? 6 DC A OP2 1 ATOM 105 O "O5'" . DC A 1 6 ? 17.693 1.312 7.810 1.00 47.07 ? 6 DC A "O5'" 1 ATOM 106 C "C5'" . DC A 1 6 ? 17.668 1.587 6.404 1.00 45.33 ? 6 DC A "C5'" 1 ATOM 107 C "C4'" . DC A 1 6 ? 18.072 0.356 5.628 1.00 39.78 ? 6 DC A "C4'" 1 ATOM 108 O "O4'" . DC A 1 6 ? 18.016 0.730 4.237 1.00 36.75 ? 6 DC A "O4'" 1 ATOM 109 C "C3'" . DC A 1 6 ? 19.519 -0.048 5.886 1.00 40.35 ? 6 DC A "C3'" 1 ATOM 110 O "O3'" . DC A 1 6 ? 19.718 -1.407 5.509 1.00 46.40 ? 6 DC A "O3'" 1 ATOM 111 C "C2'" . DC A 1 6 ? 20.277 0.838 4.919 1.00 36.69 ? 6 DC A "C2'" 1 ATOM 112 C "C1'" . DC A 1 6 ? 19.317 1.017 3.753 1.00 28.95 ? 6 DC A "C1'" 1 ATOM 113 N N1 . DC A 1 6 ? 19.312 2.391 3.260 1.00 20.03 ? 6 DC A N1 1 ATOM 114 C C2 . DC A 1 6 ? 19.371 2.602 1.891 1.00 21.50 ? 6 DC A C2 1 ATOM 115 O O2 . DC A 1 6 ? 19.362 1.619 1.138 1.00 21.59 ? 6 DC A O2 1 ATOM 116 N N3 . DC A 1 6 ? 19.433 3.862 1.415 1.00 18.29 ? 6 DC A N3 1 ATOM 117 C C4 . DC A 1 6 ? 19.427 4.886 2.263 1.00 19.91 ? 6 DC A C4 1 ATOM 118 N N4 . DC A 1 6 ? 19.515 6.109 1.746 1.00 23.81 ? 6 DC A N4 1 ATOM 119 C C5 . DC A 1 6 ? 19.335 4.699 3.674 1.00 20.39 ? 6 DC A C5 1 ATOM 120 C C6 . DC A 1 6 ? 19.275 3.443 4.125 1.00 18.50 ? 6 DC A C6 1 ATOM 121 O "O5'" . DG B 1 1 ? 23.373 5.014 -8.104 1.00 56.77 ? 7 DG B "O5'" 1 ATOM 122 C "C5'" . DG B 1 1 ? 22.133 4.560 -8.660 1.00 46.25 ? 7 DG B "C5'" 1 ATOM 123 C "C4'" . DG B 1 1 ? 21.687 3.265 -8.022 1.00 42.25 ? 7 DG B "C4'" 1 ATOM 124 O "O4'" . DG B 1 1 ? 21.636 3.431 -6.586 1.00 44.02 ? 7 DG B "O4'" 1 ATOM 125 C "C3'" . DG B 1 1 ? 20.283 2.835 -8.443 1.00 44.64 ? 7 DG B "C3'" 1 ATOM 126 O "O3'" . DG B 1 1 ? 20.247 1.401 -8.444 1.00 49.40 ? 7 DG B "O3'" 1 ATOM 127 C "C2'" . DG B 1 1 ? 19.414 3.376 -7.324 1.00 42.79 ? 7 DG B "C2'" 1 ATOM 128 C "C1'" . DG B 1 1 ? 20.317 3.196 -6.116 1.00 37.42 ? 7 DG B "C1'" 1 ATOM 129 N N9 . DG B 1 1 ? 20.069 4.108 -5.005 1.00 27.07 ? 7 DG B N9 1 ATOM 130 C C8 . DG B 1 1 ? 19.966 5.475 -5.058 1.00 20.63 ? 7 DG B C8 1 ATOM 131 N N7 . DG B 1 1 ? 19.772 6.018 -3.884 1.00 21.77 ? 7 DG B N7 1 ATOM 132 C C5 . DG B 1 1 ? 19.741 4.944 -3.005 1.00 10.16 ? 7 DG B C5 1 ATOM 133 C C6 . DG B 1 1 ? 19.567 4.914 -1.605 1.00 18.53 ? 7 DG B C6 1 ATOM 134 O O6 . DG B 1 1 ? 19.422 5.865 -0.822 1.00 22.77 ? 7 DG B O6 1 ATOM 135 N N1 . DG B 1 1 ? 19.586 3.612 -1.114 1.00 12.43 ? 7 DG B N1 1 ATOM 136 C C2 . DG B 1 1 ? 19.765 2.490 -1.877 1.00 15.02 ? 7 DG B C2 1 ATOM 137 N N2 . DG B 1 1 ? 19.754 1.323 -1.221 1.00 15.20 ? 7 DG B N2 1 ATOM 138 N N3 . DG B 1 1 ? 19.942 2.506 -3.186 1.00 16.77 ? 7 DG B N3 1 ATOM 139 C C4 . DG B 1 1 ? 19.914 3.759 -3.680 1.00 19.58 ? 7 DG B C4 1 ATOM 140 P P . DG B 1 2 ? 18.974 0.631 -9.049 1.00 48.68 ? 8 DG B P 1 ATOM 141 O OP1 . DG B 1 2 ? 19.474 -0.453 -9.936 1.00 49.16 ? 8 DG B OP1 1 ATOM 142 O OP2 . DG B 1 2 ? 18.033 1.650 -9.583 1.00 49.40 ? 8 DG B OP2 1 ATOM 143 O "O5'" . DG B 1 2 ? 18.338 -0.064 -7.769 1.00 41.70 ? 8 DG B "O5'" 1 ATOM 144 C "C5'" . DG B 1 2 ? 19.188 -0.651 -6.780 1.00 39.74 ? 8 DG B "C5'" 1 ATOM 145 C "C4'" . DG B 1 2 ? 18.355 -1.417 -5.781 1.00 39.99 ? 8 DG B "C4'" 1 ATOM 146 O "O4'" . DG B 1 2 ? 18.056 -0.574 -4.644 1.00 45.96 ? 8 DG B "O4'" 1 ATOM 147 C "C3'" . DG B 1 2 ? 17.008 -1.830 -6.366 1.00 39.68 ? 8 DG B "C3'" 1 ATOM 148 O "O3'" . DG B 1 2 ? 16.625 -3.064 -5.735 1.00 44.64 ? 8 DG B "O3'" 1 ATOM 149 C "C2'" . DG B 1 2 ? 16.108 -0.674 -5.968 1.00 39.13 ? 8 DG B "C2'" 1 ATOM 150 C "C1'" . DG B 1 2 ? 16.678 -0.211 -4.635 1.00 36.76 ? 8 DG B "C1'" 1 ATOM 151 N N9 . DG B 1 2 ? 16.596 1.225 -4.371 1.00 26.47 ? 8 DG B N9 1 ATOM 152 C C8 . DG B 1 2 ? 16.693 2.250 -5.282 1.00 24.48 ? 8 DG B C8 1 ATOM 153 N N7 . DG B 1 2 ? 16.623 3.434 -4.731 1.00 26.18 ? 8 DG B N7 1 ATOM 154 C C5 . DG B 1 2 ? 16.467 3.177 -3.376 1.00 19.94 ? 8 DG B C5 1 ATOM 155 C C6 . DG B 1 2 ? 16.342 4.074 -2.271 1.00 20.91 ? 8 DG B C6 1 ATOM 156 O O6 . DG B 1 2 ? 16.368 5.314 -2.264 1.00 21.12 ? 8 DG B O6 1 ATOM 157 N N1 . DG B 1 2 ? 16.186 3.387 -1.076 1.00 16.13 ? 8 DG B N1 1 ATOM 158 C C2 . DG B 1 2 ? 16.157 2.019 -0.959 1.00 18.90 ? 8 DG B C2 1 ATOM 159 N N2 . DG B 1 2 ? 15.956 1.545 0.276 1.00 18.94 ? 8 DG B N2 1 ATOM 160 N N3 . DG B 1 2 ? 16.297 1.176 -1.970 1.00 13.77 ? 8 DG B N3 1 ATOM 161 C C4 . DG B 1 2 ? 16.437 1.819 -3.140 1.00 19.03 ? 8 DG B C4 1 ATOM 162 P P . DC B 1 3 ? 15.216 -3.754 -6.081 1.00 44.37 ? 9 DC B P 1 ATOM 163 O OP1 . DC B 1 3 ? 15.416 -5.213 -5.902 1.00 47.58 ? 9 DC B OP1 1 ATOM 164 O OP2 . DC B 1 3 ? 14.672 -3.232 -7.365 1.00 39.84 ? 9 DC B OP2 1 ATOM 165 O "O5'" . DC B 1 3 ? 14.276 -3.266 -4.893 1.00 40.12 ? 9 DC B "O5'" 1 ATOM 166 C "C5'" . DC B 1 3 ? 14.724 -3.345 -3.532 1.00 33.07 ? 9 DC B "C5'" 1 ATOM 167 C "C4'" . DC B 1 3 ? 13.612 -2.933 -2.595 1.00 29.51 ? 9 DC B "C4'" 1 ATOM 168 O "O4'" . DC B 1 3 ? 13.664 -1.516 -2.320 1.00 29.59 ? 9 DC B "O4'" 1 ATOM 169 C "C3'" . DC B 1 3 ? 12.208 -3.191 -3.139 1.00 32.97 ? 9 DC B "C3'" 1 ATOM 170 O "O3'" . DC B 1 3 ? 11.384 -3.395 -1.987 1.00 40.73 ? 9 DC B "O3'" 1 ATOM 171 C "C2'" . DC B 1 3 ? 11.846 -1.840 -3.728 1.00 24.93 ? 9 DC B "C2'" 1 ATOM 172 C "C1'" . DC B 1 3 ? 12.411 -0.943 -2.649 1.00 18.03 ? 9 DC B "C1'" 1 ATOM 173 N N1 . DC B 1 3 ? 12.638 0.444 -3.040 1.00 8.15 ? 9 DC B N1 1 ATOM 174 C C2 . DC B 1 3 ? 12.680 1.414 -2.041 1.00 13.97 ? 9 DC B C2 1 ATOM 175 O O2 . DC B 1 3 ? 12.519 1.055 -0.854 1.00 14.50 ? 9 DC B O2 1 ATOM 176 N N3 . DC B 1 3 ? 12.893 2.706 -2.384 1.00 6.11 ? 9 DC B N3 1 ATOM 177 C C4 . DC B 1 3 ? 13.062 3.024 -3.667 1.00 7.55 ? 9 DC B C4 1 ATOM 178 N N4 . DC B 1 3 ? 13.279 4.296 -3.976 1.00 9.93 ? 9 DC B N4 1 ATOM 179 C C5 . DC B 1 3 ? 13.018 2.050 -4.699 1.00 4.90 ? 9 DC B C5 1 ATOM 180 C C6 . DC B 1 3 ? 12.805 0.784 -4.345 1.00 6.04 ? 9 DC B C6 1 ATOM 181 P P . DG B 1 4 ? 10.356 -4.626 -1.927 1.00 43.27 ? 10 DG B P 1 ATOM 182 O OP1 . DG B 1 4 ? 11.148 -5.880 -1.808 1.00 44.18 ? 10 DG B OP1 1 ATOM 183 O OP2 . DG B 1 4 ? 9.346 -4.487 -3.005 1.00 43.69 ? 10 DG B OP2 1 ATOM 184 O "O5'" . DG B 1 4 ? 9.670 -4.366 -0.520 1.00 38.97 ? 10 DG B "O5'" 1 ATOM 185 C "C5'" . DG B 1 4 ? 10.504 -4.119 0.621 1.00 34.26 ? 10 DG B "C5'" 1 ATOM 186 C "C4'" . DG B 1 4 ? 9.873 -3.083 1.518 1.00 28.78 ? 10 DG B "C4'" 1 ATOM 187 O "O4'" . DG B 1 4 ? 10.046 -1.768 0.952 1.00 31.50 ? 10 DG B "O4'" 1 ATOM 188 C "C3'" . DG B 1 4 ? 8.371 -3.280 1.683 1.00 29.12 ? 10 DG B "C3'" 1 ATOM 189 O "O3'" . DG B 1 4 ? 8.082 -2.998 3.051 1.00 34.90 ? 10 DG B "O3'" 1 ATOM 190 C "C2'" . DG B 1 4 ? 7.769 -2.235 0.763 1.00 28.14 ? 10 DG B "C2'" 1 ATOM 191 C "C1'" . DG B 1 4 ? 8.797 -1.122 0.802 1.00 19.68 ? 10 DG B "C1'" 1 ATOM 192 N N9 . DG B 1 4 ? 8.869 -0.328 -0.416 1.00 11.79 ? 10 DG B N9 1 ATOM 193 C C8 . DG B 1 4 ? 8.858 -0.795 -1.704 1.00 15.93 ? 10 DG B C8 1 ATOM 194 N N7 . DG B 1 4 ? 8.951 0.158 -2.594 1.00 17.05 ? 10 DG B N7 1 ATOM 195 C C5 . DG B 1 4 ? 9.022 1.325 -1.843 1.00 13.38 ? 10 DG B C5 1 ATOM 196 C C6 . DG B 1 4 ? 9.128 2.686 -2.251 1.00 13.37 ? 10 DG B C6 1 ATOM 197 O O6 . DG B 1 4 ? 9.171 3.152 -3.394 1.00 19.22 ? 10 DG B O6 1 ATOM 198 N N1 . DG B 1 4 ? 9.176 3.546 -1.165 1.00 5.60 ? 10 DG B N1 1 ATOM 199 C C2 . DG B 1 4 ? 9.122 3.155 0.142 1.00 10.60 ? 10 DG B C2 1 ATOM 200 N N2 . DG B 1 4 ? 9.179 4.140 1.045 1.00 16.20 ? 10 DG B N2 1 ATOM 201 N N3 . DG B 1 4 ? 9.017 1.897 0.541 1.00 15.15 ? 10 DG B N3 1 ATOM 202 C C4 . DG B 1 4 ? 8.974 1.041 -0.499 1.00 13.26 ? 10 DG B C4 1 ATOM 203 P P . DC B 1 5 ? 6.637 -3.347 3.645 1.00 41.60 ? 11 DC B P 1 ATOM 204 O OP1 . DC B 1 5 ? 6.860 -3.865 5.019 1.00 39.72 ? 11 DC B OP1 1 ATOM 205 O OP2 . DC B 1 5 ? 5.878 -4.160 2.651 1.00 35.45 ? 11 DC B OP2 1 ATOM 206 O "O5'" . DC B 1 5 ? 5.960 -1.915 3.771 1.00 39.77 ? 11 DC B "O5'" 1 ATOM 207 C "C5'" . DC B 1 5 ? 6.699 -0.826 4.333 1.00 36.78 ? 11 DC B "C5'" 1 ATOM 208 C "C4'" . DC B 1 5 ? 6.012 0.484 4.027 1.00 33.68 ? 11 DC B "C4'" 1 ATOM 209 O "O4'" . DC B 1 5 ? 6.340 0.918 2.692 1.00 32.06 ? 11 DC B "O4'" 1 ATOM 210 C "C3'" . DC B 1 5 ? 4.486 0.410 4.087 1.00 32.99 ? 11 DC B "C3'" 1 ATOM 211 O "O3'" . DC B 1 5 ? 4.027 1.318 5.093 1.00 39.60 ? 11 DC B "O3'" 1 ATOM 212 C "C2'" . DC B 1 5 ? 4.026 0.891 2.722 1.00 33.92 ? 11 DC B "C2'" 1 ATOM 213 C "C1'" . DC B 1 5 ? 5.235 1.626 2.178 1.00 24.36 ? 11 DC B "C1'" 1 ATOM 214 N N1 . DC B 1 5 ? 5.342 1.623 0.713 1.00 21.06 ? 11 DC B N1 1 ATOM 215 C C2 . DC B 1 5 ? 5.511 2.836 0.047 1.00 14.91 ? 11 DC B C2 1 ATOM 216 O O2 . DC B 1 5 ? 5.574 3.878 0.712 1.00 18.38 ? 11 DC B O2 1 ATOM 217 N N3 . DC B 1 5 ? 5.602 2.841 -1.296 1.00 10.24 ? 11 DC B N3 1 ATOM 218 C C4 . DC B 1 5 ? 5.527 1.692 -1.972 1.00 11.98 ? 11 DC B C4 1 ATOM 219 N N4 . DC B 1 5 ? 5.594 1.736 -3.309 1.00 13.91 ? 11 DC B N4 1 ATOM 220 C C5 . DC B 1 5 ? 5.372 0.444 -1.316 1.00 3.87 ? 11 DC B C5 1 ATOM 221 C C6 . DC B 1 5 ? 5.280 0.453 0.014 1.00 11.38 ? 11 DC B C6 1 ATOM 222 P P . DC B 1 6 ? 2.539 1.172 5.677 1.00 41.38 ? 12 DC B P 1 ATOM 223 O OP1 . DC B 1 6 ? 2.652 1.130 7.157 1.00 43.41 ? 12 DC B OP1 1 ATOM 224 O OP2 . DC B 1 6 ? 1.826 0.083 4.954 1.00 42.97 ? 12 DC B OP2 1 ATOM 225 O "O5'" . DC B 1 6 ? 1.877 2.563 5.290 1.00 40.23 ? 12 DC B "O5'" 1 ATOM 226 C "C5'" . DC B 1 6 ? 2.469 3.786 5.750 1.00 31.82 ? 12 DC B "C5'" 1 ATOM 227 C "C4'" . DC B 1 6 ? 2.094 4.916 4.822 1.00 21.97 ? 12 DC B "C4'" 1 ATOM 228 O "O4'" . DC B 1 6 ? 2.641 4.628 3.527 1.00 19.50 ? 12 DC B "O4'" 1 ATOM 229 C "C3'" . DC B 1 6 ? 0.594 5.041 4.603 1.00 15.59 ? 12 DC B "C3'" 1 ATOM 230 O "O3'" . DC B 1 6 ? 0.125 5.939 5.611 1.00 23.29 ? 12 DC B "O3'" 1 ATOM 231 C "C2'" . DC B 1 6 ? 0.488 5.495 3.158 1.00 11.53 ? 12 DC B "C2'" 1 ATOM 232 C "C1'" . DC B 1 6 ? 1.869 5.298 2.554 1.00 7.60 ? 12 DC B "C1'" 1 ATOM 233 N N1 . DC B 1 6 ? 1.918 4.490 1.333 1.00 4.54 ? 12 DC B N1 1 ATOM 234 C C2 . DC B 1 6 ? 2.117 5.130 0.128 1.00 4.61 ? 12 DC B C2 1 ATOM 235 O O2 . DC B 1 6 ? 2.195 6.364 0.119 1.00 14.37 ? 12 DC B O2 1 ATOM 236 N N3 . DC B 1 6 ? 2.216 4.404 -1.001 1.00 5.10 ? 12 DC B N3 1 ATOM 237 C C4 . DC B 1 6 ? 2.102 3.081 -0.950 1.00 4.60 ? 12 DC B C4 1 ATOM 238 N N4 . DC B 1 6 ? 2.219 2.415 -2.091 1.00 6.34 ? 12 DC B N4 1 ATOM 239 C C5 . DC B 1 6 ? 1.868 2.393 0.269 1.00 3.77 ? 12 DC B C5 1 ATOM 240 C C6 . DC B 1 6 ? 1.786 3.133 1.381 1.00 7.19 ? 12 DC B C6 1 HETATM 241 MG MG . MG C 2 . ? 15.197 8.674 -3.814 1.00 63.10 ? 13 MG A MG 1 HETATM 242 CO CO . NCO D 3 . ? 3.533 3.534 -7.911 0.50 5.31 ? 14 NCO A CO 1 HETATM 243 N N1 . NCO D 3 . ? 3.138 1.834 -8.689 1.00 9.38 ? 14 NCO A N1 1 HETATM 244 N N2 . NCO D 3 . ? 3.982 2.526 -6.346 1.00 8.11 ? 14 NCO A N2 1 HETATM 245 O O . HOH E 4 . ? 9.870 9.870 -7.910 0.50 59.32 ? 15 HOH A O 1 HETATM 246 O O . HOH E 4 . ? 16.653 9.105 0.302 1.00 55.46 ? 20 HOH A O 1 HETATM 247 O O . HOH E 4 . ? 0.442 6.358 -9.085 1.00 57.99 ? 22 HOH A O 1 HETATM 248 O O . HOH E 4 . ? 3.559 10.301 -2.436 1.00 54.51 ? 24 HOH A O 1 HETATM 249 O O . HOH E 4 . ? 11.558 4.365 3.684 1.00 61.62 ? 25 HOH A O 1 HETATM 250 O O . HOH E 4 . ? 19.804 -0.545 0.970 1.00 66.01 ? 26 HOH A O 1 HETATM 251 O O . HOH E 4 . ? 13.844 9.800 -2.819 1.00 64.92 ? 28 HOH A O 1 HETATM 252 O O . HOH E 4 . ? 13.738 7.368 -4.296 1.00 68.18 ? 32 HOH A O 1 HETATM 253 O O . HOH F 4 . ? 5.242 -1.335 -4.314 1.00 95.18 ? 16 HOH B O 1 HETATM 254 O O . HOH F 4 . ? 8.046 -1.409 -4.511 1.00 52.56 ? 17 HOH B O 1 HETATM 255 O O . HOH F 4 . ? 1.585 -0.522 -1.910 1.00 45.30 ? 18 HOH B O 1 HETATM 256 O O . HOH F 4 . ? 19.419 7.889 -2.437 1.00 37.91 ? 19 HOH B O 1 HETATM 257 O O . HOH F 4 . ? 2.965 -2.965 7.920 0.50 41.21 ? 21 HOH B O 1 HETATM 258 O O . HOH F 4 . ? 0.901 8.544 1.281 1.00 56.55 ? 23 HOH B O 1 HETATM 259 O O . HOH F 4 . ? 16.538 7.542 -4.817 1.00 63.07 ? 27 HOH B O 1 HETATM 260 O O . HOH F 4 . ? 15.581 7.643 -2.114 1.00 64.54 ? 29 HOH B O 1 HETATM 261 O O . HOH F 4 . ? 14.825 9.703 -5.502 1.00 64.42 ? 30 HOH B O 1 HETATM 262 O O . HOH F 4 . ? 16.649 9.982 -3.335 1.00 65.39 ? 31 HOH B O 1 #