data_200D # _entry.id 200D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 200D pdb_0000200d 10.2210/pdb200d/pdb RCSB UDF027 ? ? WWPDB D_1000177549 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-07-31 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 200D _pdbx_database_status.recvd_initial_deposition_date 1995-02-16 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kang, C.' 1 'Berger, I.' 2 'Lockshin, C.' 3 'Ratliff, R.' 4 'Moyzis, R.' 5 'Rich, A.' 6 # _citation.id primary _citation.title 'Stable loop in the crystal structure of the intercalated four-stranded cytosine-rich metazoan telomere.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 92 _citation.page_first 3874 _citation.page_last 3878 _citation.year 1995 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7731999 _citation.pdbx_database_id_DOI 10.1073/pnas.92.9.3874 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kang, C.' 1 ? primary 'Berger, I.' 2 ? primary 'Lockshin, C.' 3 ? primary 'Ratliff, R.' 4 ? primary 'Moyzis, R.' 5 ? primary 'Rich, A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*AP*AP*CP*CP*C)-3') ; 1753.194 2 ? ? ? ? 2 water nat water 18.015 26 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DA)(DA)(DC)(DC)(DC)' _entity_poly.pdbx_seq_one_letter_code_can TAACCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DA n 1 4 DC n 1 5 DC n 1 6 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DC 6 6 6 DC C A . n B 1 1 DT 1 7 7 DT T B . n B 1 2 DA 2 8 8 DA A B . n B 1 3 DA 3 9 9 DA A B . n B 1 4 DC 4 10 10 DC C B . n B 1 5 DC 5 11 11 DC C B . n B 1 6 DC 6 12 12 DC C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 13 13 HOH HOH A . C 2 HOH 2 14 14 HOH HOH A . C 2 HOH 3 15 15 HOH HOH A . C 2 HOH 4 16 16 HOH HOH A . C 2 HOH 5 20 20 HOH HOH A . C 2 HOH 6 21 21 HOH HOH A . C 2 HOH 7 22 22 HOH HOH A . C 2 HOH 8 24 24 HOH HOH A . C 2 HOH 9 30 30 HOH HOH A . C 2 HOH 10 31 31 HOH HOH A . C 2 HOH 11 32 32 HOH HOH A . C 2 HOH 12 33 33 HOH HOH A . C 2 HOH 13 34 34 HOH HOH A . D 2 HOH 1 17 17 HOH HOH B . D 2 HOH 2 18 18 HOH HOH B . D 2 HOH 3 19 19 HOH HOH B . D 2 HOH 4 23 23 HOH HOH B . D 2 HOH 5 25 25 HOH HOH B . D 2 HOH 6 26 26 HOH HOH B . D 2 HOH 7 27 27 HOH HOH B . D 2 HOH 8 28 28 HOH HOH B . D 2 HOH 9 29 29 HOH HOH B . D 2 HOH 10 35 35 HOH HOH B . D 2 HOH 11 36 36 HOH HOH B . D 2 HOH 12 37 37 HOH HOH B . D 2 HOH 13 38 38 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement . ? 1 MSC 'data reduction' . ? 2 # _cell.entry_id 200D _cell.length_a 59.940 _cell.length_b 81.330 _cell.length_c 26.860 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 200D _symmetry.space_group_name_H-M 'F 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 # _exptl.entry_id 200D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_percent_sol 47.30 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.00 _exptl_crystal_grow.pdbx_details 'pH 6.00, VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 MGCL2 ? ? ? 1 4 1 SPERMINE ? ? ? 1 5 1 KCL ? ? ? 1 6 1 'K CACODYLATE' ? ? ? 1 7 2 WATER ? ? ? 1 8 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 277.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1994-07-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 200D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.0450000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 200D _refine.ls_number_reflns_obs 2122 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 12.000 _refine.ls_d_res_high 1.850 _refine.ls_percent_reflns_obs 77.000 _refine.ls_R_factor_obs 0.1900000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1900000 _refine.ls_R_factor_R_free 0.2230000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 258 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 26 _refine_hist.number_atoms_total 284 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 12.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 4.00 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 200D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 200D _struct.title 'STABLE LOOP IN THE CRYSTAL STRUCTURE OF THE INTERCALATED FOUR-STRANDED CYTOSINE-RICH METAZOAN TELOMERE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 200D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'U-DNA, QUADRUPLE HELIX, TETRAPLEX, BASE INTERCALATED, LOOP, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 200D _struct_ref.pdbx_db_accession 200D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 200D A 1 ? 6 ? 200D 1 ? 6 ? 1 6 2 1 200D B 1 ? 6 ? 200D 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 59.9400000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 26.8600000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 3 N7 ? ? A DT 1 A DA 3 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 1 A DA 3 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog3 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 2 B DT 7 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog4 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 1 O2 ? ? A DA 2 B DT 7 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog5 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DC 4 O2 ? ? A DC 4 B DC 10 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog6 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DC 4 N4 ? ? A DC 4 B DC 10 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog7 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DC 5 N4 ? ? A DC 5 B DC 11 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog8 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DC 5 N3 ? ? A DC 5 B DC 11 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog9 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DC 6 O2 ? ? A DC 6 B DC 12 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog10 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DC 6 N4 ? ? A DC 6 B DC 12 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N1 A DA 2 ? ? H3 B DT 7 ? ? 1.43 2 1 OP2 B DA 9 ? ? H42 B DC 10 ? ? 1.54 3 1 H42 A DC 6 ? ? O2 B DC 12 ? ? 1.55 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 A DT 1 ? ? C7 A DT 1 ? ? 1.534 1.496 0.038 0.006 N 2 1 "O3'" A DT 1 ? ? P A DA 2 ? ? 1.523 1.607 -0.084 0.012 Y 3 1 "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 1.427 1.521 -0.094 0.010 N 4 1 N9 A DA 3 ? ? C4 A DA 3 ? ? 1.332 1.374 -0.042 0.006 N 5 1 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.288 1.335 -0.047 0.007 N 6 1 "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 1.461 1.516 -0.055 0.008 N 7 1 "C5'" A DC 6 ? ? "C4'" A DC 6 ? ? 1.602 1.512 0.090 0.007 N 8 1 "C3'" A DC 6 ? ? "C2'" A DC 6 ? ? 1.466 1.516 -0.050 0.008 N 9 1 N3 A DC 6 ? ? C4 A DC 6 ? ? 1.283 1.335 -0.052 0.007 N 10 1 "C5'" B DT 7 ? ? "C4'" B DT 7 ? ? 1.594 1.512 0.082 0.007 N 11 1 C2 B DT 7 ? ? N3 B DT 7 ? ? 1.324 1.373 -0.049 0.008 N 12 1 P B DA 8 ? ? "O5'" B DA 8 ? ? 1.656 1.593 0.063 0.010 N 13 1 "C4'" B DC 10 ? ? "C3'" B DC 10 ? ? 1.438 1.521 -0.083 0.010 N 14 1 N1 B DC 10 ? ? C6 B DC 10 ? ? 1.304 1.367 -0.063 0.006 N 15 1 C4 B DC 10 ? ? C5 B DC 10 ? ? 1.375 1.425 -0.050 0.008 N 16 1 N1 B DC 11 ? ? C2 B DC 11 ? ? 1.303 1.397 -0.094 0.010 N 17 1 N1 B DC 11 ? ? C6 B DC 11 ? ? 1.327 1.367 -0.040 0.006 N 18 1 C2 B DC 11 ? ? N3 B DC 11 ? ? 1.297 1.353 -0.056 0.008 N 19 1 "O4'" B DC 12 ? ? "C4'" B DC 12 ? ? 1.377 1.446 -0.069 0.010 N 20 1 N1 B DC 12 ? ? C2 B DC 12 ? ? 1.335 1.397 -0.062 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.22 108.30 2.92 0.30 N 2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.47 122.90 -4.43 0.60 N 3 1 "C3'" A DT 1 ? ? "O3'" A DT 1 ? ? P A DA 2 ? ? 134.55 119.70 14.85 1.20 Y 4 1 "O3'" A DT 1 ? ? P A DA 2 ? ? "O5'" A DA 2 ? ? 92.28 104.00 -11.72 1.90 Y 5 1 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 110.33 106.00 4.33 0.60 N 6 1 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "C2'" A DA 2 ? ? 93.10 102.20 -9.10 0.70 N 7 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 98.14 105.90 -7.76 0.80 N 8 1 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 122.32 118.60 3.72 0.60 N 9 1 "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? P A DA 3 ? ? 127.60 119.70 7.90 1.20 Y 10 1 "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 96.79 104.50 -7.71 0.40 N 11 1 "C1'" A DA 3 ? ? "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? 116.45 110.30 6.15 0.70 N 12 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 99.07 105.90 -6.83 0.80 N 13 1 N1 A DA 3 ? ? C2 A DA 3 ? ? N3 A DA 3 ? ? 132.41 129.30 3.11 0.50 N 14 1 C2 A DA 3 ? ? N3 A DA 3 ? ? C4 A DA 3 ? ? 106.73 110.60 -3.87 0.50 N 15 1 "C4'" A DC 4 ? ? "C3'" A DC 4 ? ? "C2'" A DC 4 ? ? 97.87 102.20 -4.33 0.70 N 16 1 "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 94.47 102.20 -7.73 0.70 N 17 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 103.25 108.00 -4.75 0.70 N 18 1 C2 A DC 5 ? ? N3 A DC 5 ? ? C4 A DC 5 ? ? 123.45 119.90 3.55 0.50 N 19 1 P A DC 6 ? ? "O5'" A DC 6 ? ? "C5'" A DC 6 ? ? 134.14 120.90 13.24 1.60 N 20 1 "O4'" A DC 6 ? ? "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? 100.12 104.50 -4.38 0.40 N 21 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 112.24 108.30 3.94 0.30 N 22 1 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.79 118.90 3.89 0.60 N 23 1 N3 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 113.04 118.00 -4.96 0.70 N 24 1 C5 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 124.42 120.20 4.22 0.70 N 25 1 "C5'" B DT 7 ? ? "C4'" B DT 7 ? ? "O4'" B DT 7 ? ? 119.04 109.80 9.24 1.10 N 26 1 N1 B DT 7 ? ? C2 B DT 7 ? ? O2 B DT 7 ? ? 128.37 123.10 5.27 0.80 N 27 1 N3 B DT 7 ? ? C2 B DT 7 ? ? O2 B DT 7 ? ? 117.95 122.30 -4.35 0.60 N 28 1 "C3'" B DT 7 ? ? "O3'" B DT 7 ? ? P B DA 8 ? ? 108.76 119.70 -10.94 1.20 Y 29 1 "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? "C2'" B DA 8 ? ? 100.78 105.90 -5.12 0.80 N 30 1 C2 B DA 8 ? ? N3 B DA 8 ? ? C4 B DA 8 ? ? 107.31 110.60 -3.29 0.50 N 31 1 C5 B DA 8 ? ? C6 B DA 8 ? ? N1 B DA 8 ? ? 113.70 117.70 -4.00 0.50 N 32 1 "O4'" B DA 9 ? ? "C1'" B DA 9 ? ? "C2'" B DA 9 ? ? 98.60 105.90 -7.30 0.80 N 33 1 "C1'" B DC 10 ? ? "O4'" B DC 10 ? ? "C4'" B DC 10 ? ? 116.83 110.30 6.53 0.70 N 34 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? "C2'" B DC 10 ? ? 95.64 105.90 -10.26 0.80 N 35 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.86 108.30 3.56 0.30 N 36 1 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 116.78 121.90 -5.12 0.70 N 37 1 "C3'" B DC 10 ? ? "O3'" B DC 10 ? ? P B DC 11 ? ? 128.94 119.70 9.24 1.20 Y 38 1 "C3'" B DC 11 ? ? "O3'" B DC 11 ? ? P B DC 12 ? ? 127.97 119.70 8.27 1.20 Y 39 1 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? "C2'" B DC 12 ? ? 100.83 105.90 -5.07 0.80 N 40 1 C2 B DC 12 ? ? N3 B DC 12 ? ? C4 B DC 12 ? ? 124.47 119.90 4.57 0.50 N 41 1 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 123.48 118.90 4.58 0.60 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DA _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 3 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.060 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DT OP3 O N N 71 DT P P N N 72 DT OP1 O N N 73 DT OP2 O N N 74 DT "O5'" O N N 75 DT "C5'" C N N 76 DT "C4'" C N R 77 DT "O4'" O N N 78 DT "C3'" C N S 79 DT "O3'" O N N 80 DT "C2'" C N N 81 DT "C1'" C N R 82 DT N1 N N N 83 DT C2 C N N 84 DT O2 O N N 85 DT N3 N N N 86 DT C4 C N N 87 DT O4 O N N 88 DT C5 C N N 89 DT C7 C N N 90 DT C6 C N N 91 DT HOP3 H N N 92 DT HOP2 H N N 93 DT "H5'" H N N 94 DT "H5''" H N N 95 DT "H4'" H N N 96 DT "H3'" H N N 97 DT "HO3'" H N N 98 DT "H2'" H N N 99 DT "H2''" H N N 100 DT "H1'" H N N 101 DT H3 H N N 102 DT H71 H N N 103 DT H72 H N N 104 DT H73 H N N 105 DT H6 H N N 106 HOH O O N N 107 HOH H1 H N N 108 HOH H2 H N N 109 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DT OP3 P sing N N 74 DT OP3 HOP3 sing N N 75 DT P OP1 doub N N 76 DT P OP2 sing N N 77 DT P "O5'" sing N N 78 DT OP2 HOP2 sing N N 79 DT "O5'" "C5'" sing N N 80 DT "C5'" "C4'" sing N N 81 DT "C5'" "H5'" sing N N 82 DT "C5'" "H5''" sing N N 83 DT "C4'" "O4'" sing N N 84 DT "C4'" "C3'" sing N N 85 DT "C4'" "H4'" sing N N 86 DT "O4'" "C1'" sing N N 87 DT "C3'" "O3'" sing N N 88 DT "C3'" "C2'" sing N N 89 DT "C3'" "H3'" sing N N 90 DT "O3'" "HO3'" sing N N 91 DT "C2'" "C1'" sing N N 92 DT "C2'" "H2'" sing N N 93 DT "C2'" "H2''" sing N N 94 DT "C1'" N1 sing N N 95 DT "C1'" "H1'" sing N N 96 DT N1 C2 sing N N 97 DT N1 C6 sing N N 98 DT C2 O2 doub N N 99 DT C2 N3 sing N N 100 DT N3 C4 sing N N 101 DT N3 H3 sing N N 102 DT C4 O4 doub N N 103 DT C4 C5 sing N N 104 DT C5 C7 sing N N 105 DT C5 C6 doub N N 106 DT C7 H71 sing N N 107 DT C7 H72 sing N N 108 DT C7 H73 sing N N 109 DT C6 H6 sing N N 110 HOH O H1 sing N N 111 HOH O H2 sing N N 112 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 200D 'double helix' 200D 'parallel strands' 200D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 1 1_555 0.647 1.405 -0.075 -6.037 5.429 179.470 1 A_DA2:DT7_B A 2 ? B 7 ? 21 2 1 A DA 3 1_555 A DT 1 1_555 0.729 -3.378 0.063 -3.994 -10.325 75.312 2 A_DA3:DT1_A A 3 ? A 1 ? 23 3 1 B DC 4 1_555 A DC 4 1_555 -2.120 -1.357 0.246 6.251 -10.196 -177.674 3 B_DC10:DC4_A B 10 ? A 4 ? 15 2 1 B DC 5 1_555 A DC 5 1_555 -2.098 -1.041 0.013 7.603 -6.173 -178.785 4 B_DC11:DC5_A B 11 ? A 5 ? 14 2 1 B DC 6 1_555 A DC 6 1_555 -2.096 -1.232 0.286 -0.592 4.252 -179.470 5 B_DC12:DC6_A B 12 ? A 6 ? 15 2 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 1 1_555 A DA 3 1_555 A DT 1 1_555 1.828 -1.547 3.651 -3.211 -2.169 73.231 -1.218 -1.645 3.617 -1.817 2.690 73.319 1 AA_DA2DA3:DT1DT7_AB A 2 ? B 7 ? A 3 ? A 1 ? 1 A DA 3 1_555 A DT 1 1_555 B DC 4 1_555 A DC 4 1_555 1.025 2.083 2.934 -0.143 2.764 26.223 3.880 -2.283 3.127 6.070 0.313 26.366 2 AB_DA3DC10:DC4DT1_AA A 3 ? A 1 ? B 10 ? A 4 ? 1 B DC 4 1_555 A DC 4 1_555 B DC 5 1_555 A DC 5 1_555 0.238 -0.332 6.550 -2.006 -2.965 17.552 2.398 -3.108 6.448 -9.586 6.487 17.910 3 BB_DC10DC11:DC5DC4_AA B 10 ? A 4 ? B 11 ? A 5 ? 1 B DC 5 1_555 A DC 5 1_555 B DC 6 1_555 A DC 6 1_555 -0.150 0.270 6.758 -1.782 -1.225 19.616 2.001 -1.324 6.715 -3.583 5.209 19.733 4 BB_DC11DC12:DC6DC5_AA B 11 ? A 5 ? B 12 ? A 6 ? # _atom_sites.entry_id 200D _atom_sites.fract_transf_matrix[1][1] 0.016683 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012296 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.037230 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DT A 1 1 ? 24.565 31.319 24.443 1.00 30.44 ? 1 DT A "O5'" 1 ATOM 2 C "C5'" . DT A 1 1 ? 23.942 30.467 25.330 1.00 20.89 ? 1 DT A "C5'" 1 ATOM 3 C "C4'" . DT A 1 1 ? 23.216 29.306 24.650 1.00 27.77 ? 1 DT A "C4'" 1 ATOM 4 O "O4'" . DT A 1 1 ? 22.175 29.736 23.812 1.00 23.30 ? 1 DT A "O4'" 1 ATOM 5 C "C3'" . DT A 1 1 ? 24.157 28.454 23.852 1.00 35.38 ? 1 DT A "C3'" 1 ATOM 6 O "O3'" . DT A 1 1 ? 23.905 27.189 24.366 1.00 33.40 ? 1 DT A "O3'" 1 ATOM 7 C "C2'" . DT A 1 1 ? 23.531 28.590 22.502 1.00 34.88 ? 1 DT A "C2'" 1 ATOM 8 C "C1'" . DT A 1 1 ? 22.104 28.825 22.807 1.00 18.33 ? 1 DT A "C1'" 1 ATOM 9 N N1 . DT A 1 1 ? 21.415 29.371 21.650 1.00 27.22 ? 1 DT A N1 1 ATOM 10 C C2 . DT A 1 1 ? 21.061 28.462 20.735 1.00 17.62 ? 1 DT A C2 1 ATOM 11 O O2 . DT A 1 1 ? 21.294 27.274 20.916 1.00 23.45 ? 1 DT A O2 1 ATOM 12 N N3 . DT A 1 1 ? 20.409 28.945 19.635 1.00 20.47 ? 1 DT A N3 1 ATOM 13 C C4 . DT A 1 1 ? 20.071 30.242 19.367 1.00 19.02 ? 1 DT A C4 1 ATOM 14 O O4 . DT A 1 1 ? 19.434 30.520 18.346 1.00 27.67 ? 1 DT A O4 1 ATOM 15 C C5 . DT A 1 1 ? 20.491 31.148 20.397 1.00 28.05 ? 1 DT A C5 1 ATOM 16 C C7 . DT A 1 1 ? 20.220 32.654 20.284 1.00 24.86 ? 1 DT A C7 1 ATOM 17 C C6 . DT A 1 1 ? 21.136 30.694 21.482 1.00 14.22 ? 1 DT A C6 1 ATOM 18 H H3 . DT A 1 1 ? 20.149 28.273 18.939 1.00 0.00 ? 1 DT A H3 1 ATOM 19 H "HO5'" . DT A 1 1 ? 25.263 30.835 24.004 1.00 0.00 ? 1 DT A "HO5'" 1 ATOM 20 P P . DA A 1 2 ? 24.766 25.974 24.683 1.00 23.53 ? 2 DA A P 1 ATOM 21 O OP1 . DA A 1 2 ? 24.819 25.775 26.131 1.00 27.65 ? 2 DA A OP1 1 ATOM 22 O OP2 . DA A 1 2 ? 25.964 25.990 23.827 1.00 38.21 ? 2 DA A OP2 1 ATOM 23 O "O5'" . DA A 1 2 ? 23.749 24.991 23.979 1.00 23.31 ? 2 DA A "O5'" 1 ATOM 24 C "C5'" . DA A 1 2 ? 22.350 25.133 24.144 1.00 31.45 ? 2 DA A "C5'" 1 ATOM 25 C "C4'" . DA A 1 2 ? 21.502 24.042 23.575 1.00 10.83 ? 2 DA A "C4'" 1 ATOM 26 O "O4'" . DA A 1 2 ? 20.221 24.252 24.204 1.00 36.32 ? 2 DA A "O4'" 1 ATOM 27 C "C3'" . DA A 1 2 ? 21.353 24.038 22.059 1.00 39.61 ? 2 DA A "C3'" 1 ATOM 28 O "O3'" . DA A 1 2 ? 22.218 23.042 21.474 1.00 19.31 ? 2 DA A "O3'" 1 ATOM 29 C "C2'" . DA A 1 2 ? 19.926 23.509 22.118 1.00 23.91 ? 2 DA A "C2'" 1 ATOM 30 C "C1'" . DA A 1 2 ? 19.171 24.220 23.257 1.00 29.47 ? 2 DA A "C1'" 1 ATOM 31 N N9 . DA A 1 2 ? 18.839 25.627 23.010 1.00 19.13 ? 2 DA A N9 1 ATOM 32 C C8 . DA A 1 2 ? 19.151 26.734 23.759 1.00 21.05 ? 2 DA A C8 1 ATOM 33 N N7 . DA A 1 2 ? 18.737 27.848 23.267 1.00 20.27 ? 2 DA A N7 1 ATOM 34 C C5 . DA A 1 2 ? 18.093 27.426 22.100 1.00 14.04 ? 2 DA A C5 1 ATOM 35 C C6 . DA A 1 2 ? 17.391 28.116 21.124 1.00 18.64 ? 2 DA A C6 1 ATOM 36 N N6 . DA A 1 2 ? 17.250 29.453 21.149 1.00 24.64 ? 2 DA A N6 1 ATOM 37 N N1 . DA A 1 2 ? 16.861 27.359 20.157 1.00 15.56 ? 2 DA A N1 1 ATOM 38 C C2 . DA A 1 2 ? 17.016 26.046 20.152 1.00 9.93 ? 2 DA A C2 1 ATOM 39 N N3 . DA A 1 2 ? 17.641 25.306 20.992 1.00 23.82 ? 2 DA A N3 1 ATOM 40 C C4 . DA A 1 2 ? 18.160 26.078 21.948 1.00 11.68 ? 2 DA A C4 1 ATOM 41 H H61 . DA A 1 2 ? 16.745 29.923 20.410 1.00 0.00 ? 2 DA A H61 1 ATOM 42 H H62 . DA A 1 2 ? 17.644 29.994 21.903 1.00 0.00 ? 2 DA A H62 1 ATOM 43 P P . DA A 1 3 ? 23.030 23.149 20.153 1.00 20.46 ? 3 DA A P 1 ATOM 44 O OP1 . DA A 1 3 ? 23.954 22.013 20.095 1.00 24.95 ? 3 DA A OP1 1 ATOM 45 O OP2 . DA A 1 3 ? 23.531 24.509 20.030 1.00 19.53 ? 3 DA A OP2 1 ATOM 46 O "O5'" . DA A 1 3 ? 21.880 22.885 19.163 1.00 17.18 ? 3 DA A "O5'" 1 ATOM 47 C "C5'" . DA A 1 3 ? 21.278 21.604 19.070 1.00 13.90 ? 3 DA A "C5'" 1 ATOM 48 C "C4'" . DA A 1 3 ? 20.159 21.601 18.065 1.00 21.24 ? 3 DA A "C4'" 1 ATOM 49 O "O4'" . DA A 1 3 ? 19.337 22.719 18.308 1.00 21.96 ? 3 DA A "O4'" 1 ATOM 50 C "C3'" . DA A 1 3 ? 20.581 21.983 16.756 1.00 22.35 ? 3 DA A "C3'" 1 ATOM 51 O "O3'" . DA A 1 3 ? 21.091 20.871 16.039 1.00 35.11 ? 3 DA A "O3'" 1 ATOM 52 C "C2'" . DA A 1 3 ? 19.323 22.493 16.117 1.00 36.04 ? 3 DA A "C2'" 1 ATOM 53 C "C1'" . DA A 1 3 ? 18.685 23.288 17.172 1.00 20.51 ? 3 DA A "C1'" 1 ATOM 54 N N9 . DA A 1 3 ? 18.982 24.750 17.163 1.00 14.73 ? 3 DA A N9 1 ATOM 55 C C8 . DA A 1 3 ? 19.499 25.507 18.166 1.00 8.55 ? 3 DA A C8 1 ATOM 56 N N7 . DA A 1 3 ? 19.478 26.769 17.943 1.00 16.60 ? 3 DA A N7 1 ATOM 57 C C5 . DA A 1 3 ? 18.913 26.871 16.693 1.00 12.55 ? 3 DA A C5 1 ATOM 58 C C6 . DA A 1 3 ? 18.601 27.989 15.881 1.00 20.70 ? 3 DA A C6 1 ATOM 59 N N6 . DA A 1 3 ? 18.741 29.276 16.217 1.00 14.67 ? 3 DA A N6 1 ATOM 60 N N1 . DA A 1 3 ? 18.060 27.707 14.701 1.00 13.89 ? 3 DA A N1 1 ATOM 61 C C2 . DA A 1 3 ? 17.850 26.408 14.389 1.00 29.53 ? 3 DA A C2 1 ATOM 62 N N3 . DA A 1 3 ? 18.083 25.275 15.052 1.00 18.60 ? 3 DA A N3 1 ATOM 63 C C4 . DA A 1 3 ? 18.625 25.618 16.218 1.00 8.22 ? 3 DA A C4 1 ATOM 64 H H61 . DA A 1 3 ? 18.524 30.004 15.551 1.00 0.00 ? 3 DA A H61 1 ATOM 65 H H62 . DA A 1 3 ? 19.059 29.517 17.142 1.00 0.00 ? 3 DA A H62 1 ATOM 66 P P . DC A 1 4 ? 22.425 21.041 15.096 1.00 24.23 ? 4 DC A P 1 ATOM 67 O OP1 . DC A 1 4 ? 22.465 19.788 14.318 1.00 29.54 ? 4 DC A OP1 1 ATOM 68 O OP2 . DC A 1 4 ? 23.569 21.448 15.939 1.00 26.74 ? 4 DC A OP2 1 ATOM 69 O "O5'" . DC A 1 4 ? 22.106 22.295 14.117 1.00 24.38 ? 4 DC A "O5'" 1 ATOM 70 C "C5'" . DC A 1 4 ? 21.326 22.363 12.942 1.00 23.31 ? 4 DC A "C5'" 1 ATOM 71 C "C4'" . DC A 1 4 ? 21.432 23.763 12.409 1.00 19.02 ? 4 DC A "C4'" 1 ATOM 72 O "O4'" . DC A 1 4 ? 20.924 24.622 13.375 1.00 13.89 ? 4 DC A "O4'" 1 ATOM 73 C "C3'" . DC A 1 4 ? 22.882 24.127 12.138 1.00 15.94 ? 4 DC A "C3'" 1 ATOM 74 O "O3'" . DC A 1 4 ? 23.153 23.807 10.751 1.00 33.78 ? 4 DC A "O3'" 1 ATOM 75 C "C2'" . DC A 1 4 ? 22.777 25.612 12.409 1.00 26.18 ? 4 DC A "C2'" 1 ATOM 76 C "C1'" . DC A 1 4 ? 21.638 25.802 13.441 1.00 6.99 ? 4 DC A "C1'" 1 ATOM 77 N N1 . DC A 1 4 ? 22.071 25.996 14.858 1.00 15.40 ? 4 DC A N1 1 ATOM 78 C C2 . DC A 1 4 ? 22.052 27.275 15.345 1.00 14.75 ? 4 DC A C2 1 ATOM 79 O O2 . DC A 1 4 ? 21.597 28.208 14.679 1.00 20.98 ? 4 DC A O2 1 ATOM 80 N N3 . DC A 1 4 ? 22.492 27.460 16.606 1.00 19.60 ? 4 DC A N3 1 ATOM 81 C C4 . DC A 1 4 ? 22.910 26.491 17.345 1.00 7.46 ? 4 DC A C4 1 ATOM 82 N N4 . DC A 1 4 ? 23.363 26.803 18.516 1.00 11.08 ? 4 DC A N4 1 ATOM 83 C C5 . DC A 1 4 ? 22.926 25.188 16.895 1.00 7.21 ? 4 DC A C5 1 ATOM 84 C C6 . DC A 1 4 ? 22.504 24.981 15.653 1.00 9.76 ? 4 DC A C6 1 ATOM 85 H H41 . DC A 1 4 ? 23.402 27.768 18.806 1.00 0.00 ? 4 DC A H41 1 ATOM 86 H H42 . DC A 1 4 ? 23.675 26.076 19.149 1.00 0.00 ? 4 DC A H42 1 ATOM 87 P P . DC A 1 5 ? 24.446 22.970 10.188 1.00 28.52 ? 5 DC A P 1 ATOM 88 O OP1 . DC A 1 5 ? 24.144 22.120 9.020 1.00 24.29 ? 5 DC A OP1 1 ATOM 89 O OP2 . DC A 1 5 ? 25.053 22.349 11.400 1.00 34.89 ? 5 DC A OP2 1 ATOM 90 O "O5'" . DC A 1 5 ? 25.373 24.138 9.643 1.00 30.47 ? 5 DC A "O5'" 1 ATOM 91 C "C5'" . DC A 1 5 ? 24.837 25.048 8.687 1.00 27.30 ? 5 DC A "C5'" 1 ATOM 92 C "C4'" . DC A 1 5 ? 25.648 26.351 8.642 1.00 20.98 ? 5 DC A "C4'" 1 ATOM 93 O "O4'" . DC A 1 5 ? 25.627 26.952 9.905 1.00 21.19 ? 5 DC A "O4'" 1 ATOM 94 C "C3'" . DC A 1 5 ? 27.100 26.119 8.375 1.00 20.71 ? 5 DC A "C3'" 1 ATOM 95 O "O3'" . DC A 1 5 ? 27.341 25.805 7.002 1.00 23.11 ? 5 DC A "O3'" 1 ATOM 96 C "C2'" . DC A 1 5 ? 27.496 27.486 8.703 1.00 13.44 ? 5 DC A "C2'" 1 ATOM 97 C "C1'" . DC A 1 5 ? 26.696 27.830 9.919 1.00 13.82 ? 5 DC A "C1'" 1 ATOM 98 N N1 . DC A 1 5 ? 27.308 27.595 11.235 1.00 22.24 ? 5 DC A N1 1 ATOM 99 C C2 . DC A 1 5 ? 27.581 28.683 11.989 1.00 9.58 ? 5 DC A C2 1 ATOM 100 O O2 . DC A 1 5 ? 27.383 29.828 11.573 1.00 25.04 ? 5 DC A O2 1 ATOM 101 N N3 . DC A 1 5 ? 28.050 28.457 13.220 1.00 23.52 ? 5 DC A N3 1 ATOM 102 C C4 . DC A 1 5 ? 28.242 27.259 13.710 1.00 9.77 ? 5 DC A C4 1 ATOM 103 N N4 . DC A 1 5 ? 28.680 27.143 14.947 1.00 20.94 ? 5 DC A N4 1 ATOM 104 C C5 . DC A 1 5 ? 27.978 26.108 12.961 1.00 15.31 ? 5 DC A C5 1 ATOM 105 C C6 . DC A 1 5 ? 27.515 26.334 11.726 1.00 20.31 ? 5 DC A C6 1 ATOM 106 H H41 . DC A 1 5 ? 28.833 26.230 15.355 1.00 0.00 ? 5 DC A H41 1 ATOM 107 H H42 . DC A 1 5 ? 28.860 27.971 15.496 1.00 0.00 ? 5 DC A H42 1 ATOM 108 P P . DC A 1 6 ? 28.699 25.257 6.381 1.00 26.27 ? 6 DC A P 1 ATOM 109 O OP1 . DC A 1 6 ? 28.416 24.653 5.094 1.00 29.77 ? 6 DC A OP1 1 ATOM 110 O OP2 . DC A 1 6 ? 29.457 24.544 7.410 1.00 23.78 ? 6 DC A OP2 1 ATOM 111 O "O5'" . DC A 1 6 ? 29.520 26.539 6.046 1.00 32.49 ? 6 DC A "O5'" 1 ATOM 112 C "C5'" . DC A 1 6 ? 29.282 27.692 5.226 1.00 30.24 ? 6 DC A "C5'" 1 ATOM 113 C "C4'" . DC A 1 6 ? 30.531 28.674 5.429 1.00 22.63 ? 6 DC A "C4'" 1 ATOM 114 O "O4'" . DC A 1 6 ? 30.781 28.988 6.818 1.00 18.93 ? 6 DC A "O4'" 1 ATOM 115 C "C3'" . DC A 1 6 ? 31.823 27.970 5.079 1.00 28.36 ? 6 DC A "C3'" 1 ATOM 116 O "O3'" . DC A 1 6 ? 32.102 28.065 3.709 1.00 27.07 ? 6 DC A "O3'" 1 ATOM 117 C "C2'" . DC A 1 6 ? 32.812 28.770 5.808 1.00 13.00 ? 6 DC A "C2'" 1 ATOM 118 C "C1'" . DC A 1 6 ? 32.139 29.157 7.068 1.00 9.92 ? 6 DC A "C1'" 1 ATOM 119 N N1 . DC A 1 6 ? 32.607 28.338 8.228 1.00 22.07 ? 6 DC A N1 1 ATOM 120 C C2 . DC A 1 6 ? 33.155 29.092 9.255 1.00 26.49 ? 6 DC A C2 1 ATOM 121 O O2 . DC A 1 6 ? 33.154 30.333 9.252 1.00 26.06 ? 6 DC A O2 1 ATOM 122 N N3 . DC A 1 6 ? 33.673 28.433 10.285 1.00 17.53 ? 6 DC A N3 1 ATOM 123 C C4 . DC A 1 6 ? 33.677 27.152 10.362 1.00 7.84 ? 6 DC A C4 1 ATOM 124 N N4 . DC A 1 6 ? 34.255 26.711 11.432 1.00 17.65 ? 6 DC A N4 1 ATOM 125 C C5 . DC A 1 6 ? 33.130 26.339 9.369 1.00 9.69 ? 6 DC A C5 1 ATOM 126 C C6 . DC A 1 6 ? 32.596 26.974 8.310 1.00 25.15 ? 6 DC A C6 1 ATOM 127 H "HO3'" . DC A 1 6 ? 31.406 27.590 3.246 1.00 0.00 ? 6 DC A "HO3'" 1 ATOM 128 H H41 . DC A 1 6 ? 34.358 25.716 11.590 1.00 0.00 ? 6 DC A H41 1 ATOM 129 H H42 . DC A 1 6 ? 34.605 27.355 12.121 1.00 0.00 ? 6 DC A H42 1 ATOM 130 O "O5'" . DT B 1 1 ? 11.293 29.851 15.858 1.00 28.85 ? 7 DT B "O5'" 1 ATOM 131 C "C5'" . DT B 1 1 ? 11.549 31.182 16.395 1.00 25.35 ? 7 DT B "C5'" 1 ATOM 132 C "C4'" . DT B 1 1 ? 12.980 31.877 16.290 1.00 39.66 ? 7 DT B "C4'" 1 ATOM 133 O "O4'" . DT B 1 1 ? 14.126 31.292 17.044 1.00 37.54 ? 7 DT B "O4'" 1 ATOM 134 C "C3'" . DT B 1 1 ? 13.456 31.813 14.854 1.00 39.01 ? 7 DT B "C3'" 1 ATOM 135 O "O3'" . DT B 1 1 ? 14.165 32.997 14.544 1.00 38.98 ? 7 DT B "O3'" 1 ATOM 136 C "C2'" . DT B 1 1 ? 14.424 30.692 14.753 1.00 20.58 ? 7 DT B "C2'" 1 ATOM 137 C "C1'" . DT B 1 1 ? 14.994 30.617 16.125 1.00 20.74 ? 7 DT B "C1'" 1 ATOM 138 N N1 . DT B 1 1 ? 15.053 29.255 16.540 1.00 18.62 ? 7 DT B N1 1 ATOM 139 C C2 . DT B 1 1 ? 15.671 29.004 17.731 1.00 20.33 ? 7 DT B C2 1 ATOM 140 O O2 . DT B 1 1 ? 16.113 29.817 18.554 1.00 26.72 ? 7 DT B O2 1 ATOM 141 N N3 . DT B 1 1 ? 15.786 27.715 18.009 1.00 22.63 ? 7 DT B N3 1 ATOM 142 C C4 . DT B 1 1 ? 15.361 26.621 17.272 1.00 33.64 ? 7 DT B C4 1 ATOM 143 O O4 . DT B 1 1 ? 15.606 25.447 17.626 1.00 34.71 ? 7 DT B O4 1 ATOM 144 C C5 . DT B 1 1 ? 14.708 26.988 16.073 1.00 14.16 ? 7 DT B C5 1 ATOM 145 C C7 . DT B 1 1 ? 14.102 25.888 15.216 1.00 39.75 ? 7 DT B C7 1 ATOM 146 C C6 . DT B 1 1 ? 14.575 28.259 15.732 1.00 24.49 ? 7 DT B C6 1 ATOM 147 H H3 . DT B 1 1 ? 16.244 27.571 18.880 1.00 0.00 ? 7 DT B H3 1 ATOM 148 H "HO5'" . DT B 1 1 ? 11.404 29.913 14.905 1.00 0.00 ? 7 DT B "HO5'" 1 ATOM 149 P P . DA B 1 2 ? 13.931 33.345 13.024 1.00 39.22 ? 8 DA B P 1 ATOM 150 O OP1 . DA B 1 2 ? 12.612 34.036 13.039 1.00 34.77 ? 8 DA B OP1 1 ATOM 151 O OP2 . DA B 1 2 ? 14.206 32.074 12.263 1.00 39.31 ? 8 DA B OP2 1 ATOM 152 O "O5'" . DA B 1 2 ? 15.000 34.463 12.432 1.00 39.80 ? 8 DA B "O5'" 1 ATOM 153 C "C5'" . DA B 1 2 ? 16.303 34.113 11.867 1.00 39.02 ? 8 DA B "C5'" 1 ATOM 154 C "C4'" . DA B 1 2 ? 17.406 35.058 12.322 1.00 17.13 ? 8 DA B "C4'" 1 ATOM 155 O "O4'" . DA B 1 2 ? 16.819 36.368 12.502 1.00 22.28 ? 8 DA B "O4'" 1 ATOM 156 C "C3'" . DA B 1 2 ? 18.055 34.660 13.684 1.00 35.33 ? 8 DA B "C3'" 1 ATOM 157 O "O3'" . DA B 1 2 ? 19.437 35.008 13.398 1.00 39.28 ? 8 DA B "O3'" 1 ATOM 158 C "C2'" . DA B 1 2 ? 17.310 35.602 14.642 1.00 35.21 ? 8 DA B "C2'" 1 ATOM 159 C "C1'" . DA B 1 2 ? 17.143 36.915 13.808 1.00 14.63 ? 8 DA B "C1'" 1 ATOM 160 N N9 . DA B 1 2 ? 16.003 37.727 14.228 1.00 20.81 ? 8 DA B N9 1 ATOM 161 C C8 . DA B 1 2 ? 14.676 37.344 14.239 1.00 37.43 ? 8 DA B C8 1 ATOM 162 N N7 . DA B 1 2 ? 13.839 38.247 14.635 1.00 23.05 ? 8 DA B N7 1 ATOM 163 C C5 . DA B 1 2 ? 14.647 39.318 14.912 1.00 19.42 ? 8 DA B C5 1 ATOM 164 C C6 . DA B 1 2 ? 14.326 40.578 15.398 1.00 14.47 ? 8 DA B C6 1 ATOM 165 N N6 . DA B 1 2 ? 13.065 41.064 15.553 1.00 20.96 ? 8 DA B N6 1 ATOM 166 N N1 . DA B 1 2 ? 15.373 41.351 15.597 1.00 33.53 ? 8 DA B N1 1 ATOM 167 C C2 . DA B 1 2 ? 16.622 40.929 15.326 1.00 27.49 ? 8 DA B C2 1 ATOM 168 N N3 . DA B 1 2 ? 17.042 39.778 14.845 1.00 27.07 ? 8 DA B N3 1 ATOM 169 C C4 . DA B 1 2 ? 15.968 39.007 14.666 1.00 10.79 ? 8 DA B C4 1 ATOM 170 H H61 . DA B 1 2 ? 12.269 40.498 15.302 1.00 0.00 ? 8 DA B H61 1 ATOM 171 H H62 . DA B 1 2 ? 12.942 41.998 15.918 1.00 0.00 ? 8 DA B H62 1 ATOM 172 P P . DA B 1 3 ? 20.719 34.445 14.194 1.00 35.42 ? 9 DA B P 1 ATOM 173 O OP1 . DA B 1 3 ? 21.959 35.022 13.557 1.00 39.82 ? 9 DA B OP1 1 ATOM 174 O OP2 . DA B 1 3 ? 20.528 32.939 14.321 1.00 28.79 ? 9 DA B OP2 1 ATOM 175 O "O5'" . DA B 1 3 ? 20.556 35.250 15.553 1.00 39.94 ? 9 DA B "O5'" 1 ATOM 176 C "C5'" . DA B 1 3 ? 21.196 36.518 15.727 1.00 27.77 ? 9 DA B "C5'" 1 ATOM 177 C "C4'" . DA B 1 3 ? 20.828 37.045 17.056 1.00 16.24 ? 9 DA B "C4'" 1 ATOM 178 O "O4'" . DA B 1 3 ? 19.420 37.260 17.115 1.00 24.83 ? 9 DA B "O4'" 1 ATOM 179 C "C3'" . DA B 1 3 ? 21.131 36.015 18.071 1.00 22.96 ? 9 DA B "C3'" 1 ATOM 180 O "O3'" . DA B 1 3 ? 21.775 36.603 19.212 1.00 29.07 ? 9 DA B "O3'" 1 ATOM 181 C "C2'" . DA B 1 3 ? 19.740 35.550 18.407 1.00 26.00 ? 9 DA B "C2'" 1 ATOM 182 C "C1'" . DA B 1 3 ? 18.975 36.797 18.352 1.00 18.88 ? 9 DA B "C1'" 1 ATOM 183 N N9 . DA B 1 3 ? 17.533 36.628 18.310 1.00 17.60 ? 9 DA B N9 1 ATOM 184 C C8 . DA B 1 3 ? 16.740 35.511 18.232 1.00 23.85 ? 9 DA B C8 1 ATOM 185 N N7 . DA B 1 3 ? 15.467 35.795 18.264 1.00 25.36 ? 9 DA B N7 1 ATOM 186 C C5 . DA B 1 3 ? 15.416 37.185 18.373 1.00 14.91 ? 9 DA B C5 1 ATOM 187 C C6 . DA B 1 3 ? 14.358 38.117 18.472 1.00 24.27 ? 9 DA B C6 1 ATOM 188 N N6 . DA B 1 3 ? 13.051 37.812 18.565 1.00 30.71 ? 9 DA B N6 1 ATOM 189 N N1 . DA B 1 3 ? 14.730 39.429 18.573 1.00 34.89 ? 9 DA B N1 1 ATOM 190 C C2 . DA B 1 3 ? 16.025 39.778 18.587 1.00 15.13 ? 9 DA B C2 1 ATOM 191 N N3 . DA B 1 3 ? 17.077 38.975 18.506 1.00 18.79 ? 9 DA B N3 1 ATOM 192 C C4 . DA B 1 3 ? 16.688 37.686 18.401 1.00 21.13 ? 9 DA B C4 1 ATOM 193 H H61 . DA B 1 3 ? 12.726 36.865 18.446 1.00 0.00 ? 9 DA B H61 1 ATOM 194 H H62 . DA B 1 3 ? 12.408 38.552 18.781 1.00 0.00 ? 9 DA B H62 1 ATOM 195 P P . DC B 1 4 ? 23.405 36.738 19.343 1.00 28.67 ? 10 DC B P 1 ATOM 196 O OP1 . DC B 1 4 ? 23.679 37.914 20.242 1.00 34.27 ? 10 DC B OP1 1 ATOM 197 O OP2 . DC B 1 4 ? 23.910 36.731 17.961 1.00 38.84 ? 10 DC B OP2 1 ATOM 198 O "O5'" . DC B 1 4 ? 24.087 35.454 20.011 1.00 18.77 ? 10 DC B "O5'" 1 ATOM 199 C "C5'" . DC B 1 4 ? 24.087 35.100 21.368 1.00 30.20 ? 10 DC B "C5'" 1 ATOM 200 C "C4'" . DC B 1 4 ? 24.575 33.695 21.529 1.00 9.80 ? 10 DC B "C4'" 1 ATOM 201 O "O4'" . DC B 1 4 ? 23.800 32.700 20.879 1.00 18.83 ? 10 DC B "O4'" 1 ATOM 202 C "C3'" . DC B 1 4 ? 25.878 33.620 20.926 1.00 14.61 ? 10 DC B "C3'" 1 ATOM 203 O "O3'" . DC B 1 4 ? 26.615 32.959 21.958 1.00 36.36 ? 10 DC B "O3'" 1 ATOM 204 C "C2'" . DC B 1 4 ? 25.606 32.814 19.678 1.00 19.97 ? 10 DC B "C2'" 1 ATOM 205 C "C1'" . DC B 1 4 ? 24.481 31.842 19.992 1.00 15.38 ? 10 DC B "C1'" 1 ATOM 206 N N1 . DC B 1 4 ? 23.686 31.565 18.773 1.00 11.72 ? 10 DC B N1 1 ATOM 207 C C2 . DC B 1 4 ? 23.456 30.308 18.325 1.00 11.51 ? 10 DC B C2 1 ATOM 208 O O2 . DC B 1 4 ? 23.748 29.333 18.974 1.00 25.69 ? 10 DC B O2 1 ATOM 209 N N3 . DC B 1 4 ? 22.811 30.099 17.201 1.00 14.49 ? 10 DC B N3 1 ATOM 210 C C4 . DC B 1 4 ? 22.370 31.109 16.513 1.00 12.31 ? 10 DC B C4 1 ATOM 211 N N4 . DC B 1 4 ? 21.662 30.932 15.398 1.00 25.78 ? 10 DC B N4 1 ATOM 212 C C5 . DC B 1 4 ? 22.573 32.400 16.939 1.00 14.33 ? 10 DC B C5 1 ATOM 213 C C6 . DC B 1 4 ? 23.237 32.570 18.074 1.00 13.01 ? 10 DC B C6 1 ATOM 214 H H41 . DC B 1 4 ? 21.523 29.994 15.042 1.00 0.00 ? 10 DC B H41 1 ATOM 215 H H42 . DC B 1 4 ? 21.261 31.720 14.909 1.00 0.00 ? 10 DC B H42 1 ATOM 216 P P . DC B 1 5 ? 28.130 33.237 22.467 1.00 34.54 ? 11 DC B P 1 ATOM 217 O OP1 . DC B 1 5 ? 28.322 32.261 23.594 1.00 29.17 ? 11 DC B OP1 1 ATOM 218 O OP2 . DC B 1 5 ? 28.366 34.724 22.567 1.00 26.05 ? 11 DC B OP2 1 ATOM 219 O "O5'" . DC B 1 5 ? 28.851 32.747 21.146 1.00 29.65 ? 11 DC B "O5'" 1 ATOM 220 C "C5'" . DC B 1 5 ? 30.240 32.966 20.860 1.00 31.52 ? 11 DC B "C5'" 1 ATOM 221 C "C4'" . DC B 1 5 ? 30.646 31.847 19.984 1.00 13.84 ? 11 DC B "C4'" 1 ATOM 222 O "O4'" . DC B 1 5 ? 29.762 31.772 18.892 1.00 25.81 ? 11 DC B "O4'" 1 ATOM 223 C "C3'" . DC B 1 5 ? 32.016 32.042 19.492 1.00 15.90 ? 11 DC B "C3'" 1 ATOM 224 O "O3'" . DC B 1 5 ? 32.776 31.224 20.405 1.00 35.61 ? 11 DC B "O3'" 1 ATOM 225 C "C2'" . DC B 1 5 ? 31.886 31.528 18.055 1.00 19.50 ? 11 DC B "C2'" 1 ATOM 226 C "C1'" . DC B 1 5 ? 30.453 31.059 17.897 1.00 14.84 ? 11 DC B "C1'" 1 ATOM 227 N N1 . DC B 1 5 ? 29.801 31.387 16.621 1.00 8.89 ? 11 DC B N1 1 ATOM 228 C C2 . DC B 1 5 ? 29.420 30.373 15.896 1.00 10.51 ? 11 DC B C2 1 ATOM 229 O O2 . DC B 1 5 ? 29.691 29.265 16.247 1.00 16.37 ? 11 DC B O2 1 ATOM 230 N N3 . DC B 1 5 ? 28.767 30.545 14.789 1.00 14.37 ? 11 DC B N3 1 ATOM 231 C C4 . DC B 1 5 ? 28.472 31.744 14.372 1.00 8.47 ? 11 DC B C4 1 ATOM 232 N N4 . DC B 1 5 ? 27.746 31.854 13.292 1.00 24.16 ? 11 DC B N4 1 ATOM 233 C C5 . DC B 1 5 ? 28.866 32.886 15.096 1.00 19.21 ? 11 DC B C5 1 ATOM 234 C C6 . DC B 1 5 ? 29.541 32.630 16.236 1.00 19.62 ? 11 DC B C6 1 ATOM 235 H H41 . DC B 1 5 ? 27.427 32.762 12.970 1.00 0.00 ? 11 DC B H41 1 ATOM 236 H H42 . DC B 1 5 ? 27.498 31.025 12.770 1.00 0.00 ? 11 DC B H42 1 ATOM 237 P P . DC B 1 6 ? 34.436 31.147 20.578 1.00 35.23 ? 12 DC B P 1 ATOM 238 O OP1 . DC B 1 6 ? 34.764 29.859 21.271 1.00 39.08 ? 12 DC B OP1 1 ATOM 239 O OP2 . DC B 1 6 ? 34.907 32.477 21.122 1.00 36.25 ? 12 DC B OP2 1 ATOM 240 O "O5'" . DC B 1 6 ? 35.015 30.931 19.062 1.00 30.38 ? 12 DC B "O5'" 1 ATOM 241 C "C5'" . DC B 1 6 ? 36.391 30.665 18.739 1.00 30.68 ? 12 DC B "C5'" 1 ATOM 242 C "C4'" . DC B 1 6 ? 36.518 29.663 17.628 1.00 28.20 ? 12 DC B "C4'" 1 ATOM 243 O "O4'" . DC B 1 6 ? 35.889 30.201 16.528 1.00 29.99 ? 12 DC B "O4'" 1 ATOM 244 C "C3'" . DC B 1 6 ? 37.900 29.433 17.125 1.00 23.57 ? 12 DC B "C3'" 1 ATOM 245 O "O3'" . DC B 1 6 ? 38.418 28.232 17.727 1.00 39.77 ? 12 DC B "O3'" 1 ATOM 246 C "C2'" . DC B 1 6 ? 37.691 29.249 15.673 1.00 21.13 ? 12 DC B "C2'" 1 ATOM 247 C "C1'" . DC B 1 6 ? 36.254 29.370 15.451 1.00 17.03 ? 12 DC B "C1'" 1 ATOM 248 N N1 . DC B 1 6 ? 35.819 30.088 14.254 1.00 9.75 ? 12 DC B N1 1 ATOM 249 C C2 . DC B 1 6 ? 35.372 29.340 13.243 1.00 20.35 ? 12 DC B C2 1 ATOM 250 O O2 . DC B 1 6 ? 35.274 28.103 13.297 1.00 21.58 ? 12 DC B O2 1 ATOM 251 N N3 . DC B 1 6 ? 34.928 30.008 12.187 1.00 14.37 ? 12 DC B N3 1 ATOM 252 C C4 . DC B 1 6 ? 34.893 31.316 12.097 1.00 11.85 ? 12 DC B C4 1 ATOM 253 N N4 . DC B 1 6 ? 34.397 31.868 10.987 1.00 17.73 ? 12 DC B N4 1 ATOM 254 C C5 . DC B 1 6 ? 35.351 32.092 13.152 1.00 12.20 ? 12 DC B C5 1 ATOM 255 C C6 . DC B 1 6 ? 35.811 31.425 14.209 1.00 15.76 ? 12 DC B C6 1 ATOM 256 H "HO3'" . DC B 1 6 ? 38.451 28.385 18.677 1.00 0.00 ? 12 DC B "HO3'" 1 ATOM 257 H H41 . DC B 1 6 ? 34.400 32.875 10.890 1.00 0.00 ? 12 DC B H41 1 ATOM 258 H H42 . DC B 1 6 ? 34.013 31.291 10.256 1.00 0.00 ? 12 DC B H42 1 HETATM 259 O O . HOH C 2 . ? 28.213 22.100 27.530 1.00 42.22 ? 13 HOH A O 1 HETATM 260 O O . HOH C 2 . ? 26.586 21.386 7.132 1.00 44.58 ? 14 HOH A O 1 HETATM 261 O O . HOH C 2 . ? 21.619 32.763 24.469 1.00 36.66 ? 15 HOH A O 1 HETATM 262 O O . HOH C 2 . ? 28.321 21.893 10.903 1.00 34.10 ? 16 HOH A O 1 HETATM 263 O O . HOH C 2 . ? 22.484 26.473 28.343 1.00 38.32 ? 20 HOH A O 1 HETATM 264 O O . HOH C 2 . ? 19.359 34.276 23.539 1.00 31.79 ? 21 HOH A O 1 HETATM 265 O O . HOH C 2 . ? 20.296 23.598 9.052 1.00 39.71 ? 22 HOH A O 1 HETATM 266 O O . HOH C 2 . ? 28.013 24.110 25.005 1.00 29.37 ? 24 HOH A O 1 HETATM 267 O O . HOH C 2 . ? 29.595 24.355 16.471 1.00 35.57 ? 30 HOH A O 1 HETATM 268 O O . HOH C 2 . ? 34.129 23.669 11.033 1.00 30.44 ? 31 HOH A O 1 HETATM 269 O O . HOH C 2 . ? 26.296 25.396 21.262 1.00 22.48 ? 32 HOH A O 1 HETATM 270 O O . HOH C 2 . ? 29.926 21.907 4.334 1.00 43.21 ? 33 HOH A O 1 HETATM 271 O O . HOH C 2 . ? 25.342 21.361 22.578 1.00 27.71 ? 34 HOH A O 1 HETATM 272 O O . HOH D 2 . ? 21.384 39.724 15.164 1.00 37.35 ? 17 HOH B O 1 HETATM 273 O O . HOH D 2 . ? 15.873 22.366 19.329 1.00 48.06 ? 18 HOH B O 1 HETATM 274 O O . HOH D 2 . ? 18.356 32.435 15.970 1.00 25.93 ? 19 HOH B O 1 HETATM 275 O O . HOH D 2 . ? 41.100 27.441 15.831 1.00 27.63 ? 23 HOH B O 1 HETATM 276 O O . HOH D 2 . ? 22.484 34.287 11.145 1.00 40.90 ? 25 HOH B O 1 HETATM 277 O O . HOH D 2 . ? 12.592 34.741 18.612 1.00 23.80 ? 26 HOH B O 1 HETATM 278 O O . HOH D 2 . ? 11.090 39.558 17.897 1.00 41.31 ? 27 HOH B O 1 HETATM 279 O O . HOH D 2 . ? 13.559 32.507 19.884 1.00 29.78 ? 28 HOH B O 1 HETATM 280 O O . HOH D 2 . ? 34.412 35.088 10.781 1.00 21.68 ? 29 HOH B O 1 HETATM 281 O O . HOH D 2 . ? 19.923 40.404 18.291 1.00 31.79 ? 35 HOH B O 1 HETATM 282 O O . HOH D 2 . ? 18.633 37.421 10.594 1.00 28.62 ? 36 HOH B O 1 HETATM 283 O O . HOH D 2 . ? 41.530 30.514 14.417 1.00 36.59 ? 37 HOH B O 1 HETATM 284 O O . HOH D 2 . ? 26.648 34.690 11.974 1.00 32.48 ? 38 HOH B O 1 #