data_235D # _entry.id 235D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 235D pdb_0000235d 10.2210/pdb235d/pdb RCSB DDF055 ? ? WWPDB D_1000177621 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-01-31 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 235D _pdbx_database_status.recvd_initial_deposition_date 1995-06-22 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gao, Y.-G.' 1 'Wang, A.H.-J.' 2 # _citation.id primary _citation.title ;Crystal structures of four morpholino-doxorubicin anticancer drugs complexed with d(CGTACG) and d(CGATCG): implications in drug-DNA crosslink. ; _citation.journal_abbrev J.Biomol.Struct.Dyn. _citation.journal_volume 13 _citation.page_first 103 _citation.page_last 117 _citation.year 1995 _citation.journal_id_ASTM JBSDD6 _citation.country US _citation.journal_id_ISSN 0739-1102 _citation.journal_id_CSD 0646 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8527023 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, Y.G.' 1 ? primary 'Wang, A.H.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*AP*TP*CP*G)-3') ; 1809.217 1 ? ? ? ? 2 non-polymer syn "3'-DESAMINO-3'-(2-METHOXY-4-MORPHOLINYL)-DOXORUBICIN" 643.635 1 ? ? ? ? 3 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGATCG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "3'-DESAMINO-3'-(2-METHOXY-4-MORPHOLINYL)-DOXORUBICIN" DMM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DC n 1 6 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DMM non-polymer . "3'-DESAMINO-3'-(2-METHOXY-4-MORPHOLINYL)-DOXORUBICIN" ? 'C32 H37 N O13' 643.635 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMM 1 7 7 DMM DMM A . C 3 HOH 1 8 8 HOH HOH A . C 3 HOH 2 9 9 HOH HOH A . C 3 HOH 3 10 10 HOH HOH A . C 3 HOH 4 11 11 HOH HOH A . C 3 HOH 5 12 12 HOH HOH A . C 3 HOH 6 13 13 HOH HOH A . C 3 HOH 7 14 14 HOH HOH A . C 3 HOH 8 15 15 HOH HOH A . C 3 HOH 9 16 16 HOH HOH A . C 3 HOH 10 17 17 HOH HOH A . C 3 HOH 11 18 18 HOH HOH A . C 3 HOH 12 19 19 HOH HOH A . C 3 HOH 13 20 20 HOH HOH A . C 3 HOH 14 21 21 HOH HOH A . C 3 HOH 15 22 22 HOH HOH A . C 3 HOH 16 23 23 HOH HOH A . C 3 HOH 17 24 24 HOH HOH A . C 3 HOH 18 25 25 HOH HOH A . C 3 HOH 19 26 26 HOH HOH A . C 3 HOH 20 27 27 HOH HOH A . C 3 HOH 21 28 28 HOH HOH A . C 3 HOH 22 29 29 HOH HOH A . C 3 HOH 23 30 30 HOH HOH A . C 3 HOH 24 31 31 HOH HOH A . C 3 HOH 25 32 32 HOH HOH A . C 3 HOH 26 33 33 HOH HOH A . C 3 HOH 27 34 34 HOH HOH A . C 3 HOH 28 35 35 HOH HOH A . C 3 HOH 29 36 36 HOH HOH A . C 3 HOH 30 37 37 HOH HOH A . C 3 HOH 31 38 38 HOH HOH A . C 3 HOH 32 39 39 HOH HOH A . C 3 HOH 33 40 40 HOH HOH A . C 3 HOH 34 41 41 HOH HOH A . C 3 HOH 35 42 42 HOH HOH A . C 3 HOH 36 43 43 HOH HOH A . C 3 HOH 37 44 44 HOH HOH A . C 3 HOH 38 45 45 HOH HOH A . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 235D _cell.length_a 28.208 _cell.length_b 28.208 _cell.length_c 53.497 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 235D _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # _exptl.entry_id 235D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.94 _exptl_crystal.density_percent_sol 58.18 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details 'ROOM TEMPERATURE' _exptl_crystal_grow.pH 6.00 _exptl_crystal_grow.pdbx_details 'pH 6.00, VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 BACL2 ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 1 SPERMINE ? ? ? 1 6 2 WATER ? ? ? 1 7 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'RIGAKU AFC-5' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 235D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 1.700 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 235D _refine.ls_number_reflns_obs 1557 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.800 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1840000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 120 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 205 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? n_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 235D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 235D _struct.title ;CRYSTAL STRUCTURE OF FOUR MORPHOLINO-DOXORUBICIN ANTICANCER DRUGS COMPLEXED WITH D(CGTACG) AND D(CGATCG): IMPLICATIONS IN DRUG-DNA CROSSLINK ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 235D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 235D _struct_ref.pdbx_db_accession 235D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 235D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 235D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 6 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 28.2080000000 -1.0000000000 0.0000000000 0.0000000000 28.2080000000 0.0000000000 0.0000000000 -1.0000000000 26.7485000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 1 A DG 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 1 A DG 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 1 A DG 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 3 A DT 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 3 A DT 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 4 A DA 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 4 A DA 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 6 A DC 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 6 A DC 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 6 A DC 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DMM 7 ? 9 'BINDING SITE FOR RESIDUE DMM A 7' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DC A 1 ? DC A 1 . ? 8_665 ? 2 AC1 9 DG A 2 ? DG A 2 . ? 8_665 ? 3 AC1 9 DA A 3 ? DA A 3 . ? 8_665 ? 4 AC1 9 DT A 4 ? DT A 4 . ? 1_555 ? 5 AC1 9 DT A 4 ? DT A 4 . ? 8_665 ? 6 AC1 9 DC A 5 ? DC A 5 . ? 1_555 ? 7 AC1 9 DG A 6 ? DG A 6 . ? 1_555 ? 8 AC1 9 HOH C . ? HOH A 14 . ? 1_555 ? 9 AC1 9 HOH C . ? HOH A 43 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 20 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 35 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_555 _pdbx_validate_symm_contact.dist 1.84 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.86 108.30 3.56 0.30 N 2 1 C2 A DC 1 ? ? N3 A DC 1 ? ? C4 A DC 1 ? ? 123.31 119.90 3.41 0.50 N 3 1 OP1 A DG 2 ? ? P A DG 2 ? ? OP2 A DG 2 ? ? 135.28 119.60 15.68 1.50 N 4 1 "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 103.12 109.40 -6.28 0.80 N 5 1 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 94.82 102.40 -7.58 0.80 N 6 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 115.06 108.30 6.76 0.30 N 7 1 N3 A DG 2 ? ? C2 A DG 2 ? ? N2 A DG 2 ? ? 115.38 119.90 -4.52 0.70 N 8 1 C5 A DG 2 ? ? C6 A DG 2 ? ? O6 A DG 2 ? ? 124.20 128.60 -4.40 0.60 N 9 1 OP1 A DA 3 ? ? P A DA 3 ? ? OP2 A DA 3 ? ? 134.67 119.60 15.07 1.50 N 10 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 111.44 108.30 3.14 0.30 N 11 1 C6 A DA 3 ? ? N1 A DA 3 ? ? C2 A DA 3 ? ? 123.52 118.60 4.92 0.60 N 12 1 N1 A DA 3 ? ? C2 A DA 3 ? ? N3 A DA 3 ? ? 125.47 129.30 -3.83 0.50 N 13 1 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 113.79 117.70 -3.91 0.50 N 14 1 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DC 5 ? ? 127.23 119.70 7.53 1.20 Y 15 1 "O5'" A DC 5 ? ? "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 103.37 109.40 -6.03 0.80 N 16 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 118.75 108.30 10.45 0.30 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C23 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id DMM _pdbx_validate_chiral.auth_seq_id 7 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DMM C1 C Y N 108 DMM C2 C Y N 109 DMM C3 C Y N 110 DMM C4 C Y N 111 DMM O4 O N N 112 DMM C5 C Y N 113 DMM C6 C N N 114 DMM O6 O N N 115 DMM C7 C Y N 116 DMM C8 C Y N 117 DMM O8 O N N 118 DMM C9 C Y N 119 DMM C10 C N S 120 DMM O10 O N N 121 DMM C11 C N N 122 DMM C12 C N S 123 DMM O12 O N N 124 DMM C13 C N N 125 DMM O13 O N N 126 DMM C14 C N N 127 DMM O14 O N N 128 DMM C15 C N N 129 DMM C16 C Y N 130 DMM C17 C Y N 131 DMM O17 O N N 132 DMM C18 C Y N 133 DMM C19 C N N 134 DMM O19 O N N 135 DMM C20 C Y N 136 DMM C21 C N N 137 DMM "C1'" C N R 138 DMM "C2'" C N N 139 DMM "C3'" C N S 140 DMM "C4'" C N S 141 DMM "O4'" O N N 142 DMM "C5'" C N S 143 DMM "O5'" O N N 144 DMM "C6'" C N N 145 DMM "N3'" N N N 146 DMM C33 C N N 147 DMM C23 C N S 148 DMM O16 O N N 149 DMM C63 C N N 150 DMM C53 C N N 151 DMM O23 O N N 152 DMM C73 C N N 153 DMM H1 H N N 154 DMM H2 H N N 155 DMM H3 H N N 156 DMM HO8 H N N 157 DMM H10 H N N 158 DMM H111 H N N 159 DMM H112 H N N 160 DMM HO12 H N N 161 DMM H141 H N N 162 DMM H142 H N N 163 DMM HO14 H N N 164 DMM H151 H N N 165 DMM H152 H N N 166 DMM HO17 H N N 167 DMM H211 H N N 168 DMM H212 H N N 169 DMM H213 H N N 170 DMM "H1'" H N N 171 DMM "H2'1" H N N 172 DMM "H2'2" H N N 173 DMM "H3'" H N N 174 DMM "H4'" H N N 175 DMM "HO4'" H N N 176 DMM "H5'" H N N 177 DMM "H6'1" H N N 178 DMM "H6'2" H N N 179 DMM "H6'3" H N N 180 DMM H331 H N N 181 DMM H332 H N N 182 DMM H23 H N N 183 DMM H631 H N N 184 DMM H632 H N N 185 DMM H531 H N N 186 DMM H532 H N N 187 DMM H731 H N N 188 DMM H732 H N N 189 DMM H733 H N N 190 DT OP3 O N N 191 DT P P N N 192 DT OP1 O N N 193 DT OP2 O N N 194 DT "O5'" O N N 195 DT "C5'" C N N 196 DT "C4'" C N R 197 DT "O4'" O N N 198 DT "C3'" C N S 199 DT "O3'" O N N 200 DT "C2'" C N N 201 DT "C1'" C N R 202 DT N1 N N N 203 DT C2 C N N 204 DT O2 O N N 205 DT N3 N N N 206 DT C4 C N N 207 DT O4 O N N 208 DT C5 C N N 209 DT C7 C N N 210 DT C6 C N N 211 DT HOP3 H N N 212 DT HOP2 H N N 213 DT "H5'" H N N 214 DT "H5''" H N N 215 DT "H4'" H N N 216 DT "H3'" H N N 217 DT "HO3'" H N N 218 DT "H2'" H N N 219 DT "H2''" H N N 220 DT "H1'" H N N 221 DT H3 H N N 222 DT H71 H N N 223 DT H72 H N N 224 DT H73 H N N 225 DT H6 H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DMM C1 C2 doub Y N 113 DMM C1 C20 sing Y N 114 DMM C1 H1 sing N N 115 DMM C2 C3 sing Y N 116 DMM C2 H2 sing N N 117 DMM C3 C4 doub Y N 118 DMM C3 H3 sing N N 119 DMM C4 O4 sing N N 120 DMM C4 C5 sing Y N 121 DMM O4 C21 sing N N 122 DMM C5 C6 sing N N 123 DMM C5 C20 doub Y N 124 DMM C6 O6 doub N N 125 DMM C6 C7 sing N N 126 DMM C7 C8 doub Y N 127 DMM C7 C18 sing Y N 128 DMM C8 O8 sing N N 129 DMM C8 C9 sing Y N 130 DMM O8 HO8 sing N N 131 DMM C9 C10 sing N N 132 DMM C9 C16 doub Y N 133 DMM C10 O10 sing N N 134 DMM C10 C11 sing N N 135 DMM C10 H10 sing N N 136 DMM O10 "C1'" sing N N 137 DMM C11 C12 sing N N 138 DMM C11 H111 sing N N 139 DMM C11 H112 sing N N 140 DMM C12 O12 sing N N 141 DMM C12 C13 sing N N 142 DMM C12 C15 sing N N 143 DMM O12 HO12 sing N N 144 DMM C13 O13 doub N N 145 DMM C13 C14 sing N N 146 DMM C14 O14 sing N N 147 DMM C14 H141 sing N N 148 DMM C14 H142 sing N N 149 DMM O14 HO14 sing N N 150 DMM C15 C16 sing N N 151 DMM C15 H151 sing N N 152 DMM C15 H152 sing N N 153 DMM C16 C17 sing Y N 154 DMM C17 O17 sing N N 155 DMM C17 C18 doub Y N 156 DMM O17 HO17 sing N N 157 DMM C18 C19 sing N N 158 DMM C19 O19 doub N N 159 DMM C19 C20 sing N N 160 DMM C21 H211 sing N N 161 DMM C21 H212 sing N N 162 DMM C21 H213 sing N N 163 DMM "C1'" "C2'" sing N N 164 DMM "C1'" "O5'" sing N N 165 DMM "C1'" "H1'" sing N N 166 DMM "C2'" "C3'" sing N N 167 DMM "C2'" "H2'1" sing N N 168 DMM "C2'" "H2'2" sing N N 169 DMM "C3'" "C4'" sing N N 170 DMM "C3'" "N3'" sing N N 171 DMM "C3'" "H3'" sing N N 172 DMM "C4'" "O4'" sing N N 173 DMM "C4'" "C5'" sing N N 174 DMM "C4'" "H4'" sing N N 175 DMM "O4'" "HO4'" sing N N 176 DMM "C5'" "O5'" sing N N 177 DMM "C5'" "C6'" sing N N 178 DMM "C5'" "H5'" sing N N 179 DMM "C6'" "H6'1" sing N N 180 DMM "C6'" "H6'2" sing N N 181 DMM "C6'" "H6'3" sing N N 182 DMM "N3'" C33 sing N N 183 DMM "N3'" C53 sing N N 184 DMM C33 C23 sing N N 185 DMM C33 H331 sing N N 186 DMM C33 H332 sing N N 187 DMM C23 O16 sing N N 188 DMM C23 O23 sing N N 189 DMM C23 H23 sing N N 190 DMM O16 C63 sing N N 191 DMM C63 C53 sing N N 192 DMM C63 H631 sing N N 193 DMM C63 H632 sing N N 194 DMM C53 H531 sing N N 195 DMM C53 H532 sing N N 196 DMM O23 C73 sing N N 197 DMM C73 H731 sing N N 198 DMM C73 H732 sing N N 199 DMM C73 H733 sing N N 200 DT OP3 P sing N N 201 DT OP3 HOP3 sing N N 202 DT P OP1 doub N N 203 DT P OP2 sing N N 204 DT P "O5'" sing N N 205 DT OP2 HOP2 sing N N 206 DT "O5'" "C5'" sing N N 207 DT "C5'" "C4'" sing N N 208 DT "C5'" "H5'" sing N N 209 DT "C5'" "H5''" sing N N 210 DT "C4'" "O4'" sing N N 211 DT "C4'" "C3'" sing N N 212 DT "C4'" "H4'" sing N N 213 DT "O4'" "C1'" sing N N 214 DT "C3'" "O3'" sing N N 215 DT "C3'" "C2'" sing N N 216 DT "C3'" "H3'" sing N N 217 DT "O3'" "HO3'" sing N N 218 DT "C2'" "C1'" sing N N 219 DT "C2'" "H2'" sing N N 220 DT "C2'" "H2''" sing N N 221 DT "C1'" N1 sing N N 222 DT "C1'" "H1'" sing N N 223 DT N1 C2 sing N N 224 DT N1 C6 sing N N 225 DT C2 O2 doub N N 226 DT C2 N3 sing N N 227 DT N3 C4 sing N N 228 DT N3 H3 sing N N 229 DT C4 O4 doub N N 230 DT C4 C5 sing N N 231 DT C5 C7 sing N N 232 DT C5 C6 doub N N 233 DT C7 H71 sing N N 234 DT C7 H72 sing N N 235 DT C7 H73 sing N N 236 DT C6 H6 sing N N 237 HOH O H1 sing N N 238 HOH O H2 sing N N 239 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 235D 'double helix' 235D 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 6 8_665 0.151 -0.202 -0.174 8.519 -0.497 -0.273 1 A_DC1:DG6_A A 1 ? A 6 ? 19 1 1 A DG 2 1_555 A DC 5 8_665 -0.132 -0.206 -0.265 -15.218 0.787 1.682 2 A_DG2:DC5_A A 2 ? A 5 ? 19 1 1 A DA 3 1_555 A DT 4 8_665 0.265 -0.170 0.118 -10.354 1.115 0.751 3 A_DA3:DT4_A A 3 ? A 4 ? 20 1 1 A DT 4 1_555 A DA 3 8_665 -0.265 -0.170 0.118 10.354 1.115 0.751 4 A_DT4:DA3_A A 4 ? A 3 ? 20 1 1 A DC 5 1_555 A DG 2 8_665 0.132 -0.206 -0.265 15.218 0.787 1.682 5 A_DC5:DG2_A A 5 ? A 2 ? 19 1 1 A DG 6 1_555 A DC 1 8_665 -0.151 -0.202 -0.174 -8.519 -0.497 -0.273 6 A_DG6:DC1_A A 6 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 6 8_665 A DG 2 1_555 A DC 5 8_665 1.241 1.094 7.091 -0.134 -2.970 35.221 2.747 -2.087 6.974 -4.898 0.220 35.342 1 AA_DC1DG2:DC5DG6_AA A 1 ? A 6 ? A 2 ? A 5 ? 1 A DG 2 1_555 A DC 5 8_665 A DA 3 1_555 A DT 4 8_665 -1.014 0.304 3.366 -5.540 1.910 32.882 0.194 0.795 3.498 3.342 9.690 33.386 2 AA_DG2DA3:DT4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ? 1 A DA 3 1_555 A DT 4 8_665 A DT 4 1_555 A DA 3 8_665 0.000 -0.554 2.909 0.000 2.379 29.613 -1.522 0.000 2.856 4.646 0.000 29.706 3 AA_DA3DT4:DA3DT4_AA A 3 ? A 4 ? A 4 ? A 3 ? 1 A DT 4 1_555 A DA 3 8_665 A DC 5 1_555 A DG 2 8_665 1.014 0.304 3.366 5.540 1.910 32.882 0.194 -0.795 3.498 3.342 -9.690 33.386 4 AA_DT4DC5:DG2DA3_AA A 4 ? A 3 ? A 5 ? A 2 ? 1 A DC 5 1_555 A DG 2 8_665 A DG 6 1_555 A DC 1 8_665 -1.241 1.094 7.091 0.134 -2.970 35.221 2.747 2.087 6.974 -4.898 -0.220 35.342 5 AA_DC5DG6:DC1DG2_AA A 5 ? A 2 ? A 6 ? A 1 ? # _atom_sites.entry_id 235D _atom_sites.fract_transf_matrix[1][1] 0.035451 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035451 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018693 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 9.551 20.456 23.137 1.00 13.23 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 9.895 21.263 24.288 1.00 12.81 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 11.416 21.218 24.421 1.00 12.94 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 11.751 20.112 25.229 1.00 12.70 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 12.180 21.040 23.116 1.00 13.01 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 13.368 21.813 23.084 1.00 13.67 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 12.538 19.565 23.089 1.00 12.58 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 12.646 19.224 24.582 1.00 12.01 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 12.234 17.833 24.732 1.00 11.36 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 13.224 16.891 24.946 1.00 10.85 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 14.392 17.246 25.037 1.00 10.28 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 12.821 15.605 25.037 1.00 10.40 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 11.537 15.227 24.946 1.00 10.73 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 11.196 13.949 25.031 1.00 10.55 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 10.502 16.206 24.742 1.00 10.92 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 10.925 17.458 24.619 1.00 11.07 ? 1 DC A C6 1 ATOM 17 P P . DG A 1 2 ? 13.765 22.894 21.966 1.00 19.59 ? 2 DG A P 1 ATOM 18 O OP1 . DG A 1 2 ? 14.668 23.627 22.881 1.00 18.14 ? 2 DG A OP1 1 ATOM 19 O OP2 . DG A 1 2 ? 12.612 23.266 21.083 1.00 19.23 ? 2 DG A OP2 1 ATOM 20 O "O5'" . DG A 1 2 ? 14.691 22.050 20.917 1.00 15.15 ? 2 DG A "O5'" 1 ATOM 21 C "C5'" . DG A 1 2 ? 15.943 21.520 21.447 1.00 14.39 ? 2 DG A "C5'" 1 ATOM 22 C "C4'" . DG A 1 2 ? 16.479 20.688 20.297 1.00 14.07 ? 2 DG A "C4'" 1 ATOM 23 O "O4'" . DG A 1 2 ? 15.729 19.478 20.291 1.00 13.58 ? 2 DG A "O4'" 1 ATOM 24 C "C3'" . DG A 1 2 ? 16.349 21.274 18.900 1.00 13.93 ? 2 DG A "C3'" 1 ATOM 25 O "O3'" . DG A 1 2 ? 17.365 20.857 17.996 1.00 14.60 ? 2 DG A "O3'" 1 ATOM 26 C "C2'" . DG A 1 2 ? 15.001 20.671 18.430 1.00 13.55 ? 2 DG A "C2'" 1 ATOM 27 C "C1'" . DG A 1 2 ? 15.314 19.246 18.933 1.00 12.88 ? 2 DG A "C1'" 1 ATOM 28 N N9 . DG A 1 2 ? 14.149 18.389 18.783 1.00 12.11 ? 2 DG A N9 1 ATOM 29 C C8 . DG A 1 2 ? 12.832 18.736 18.697 1.00 11.76 ? 2 DG A C8 1 ATOM 30 N N7 . DG A 1 2 ? 12.036 17.720 18.553 1.00 11.74 ? 2 DG A N7 1 ATOM 31 C C5 . DG A 1 2 ? 12.863 16.620 18.473 1.00 11.28 ? 2 DG A C5 1 ATOM 32 C C6 . DG A 1 2 ? 12.595 15.232 18.312 1.00 11.01 ? 2 DG A C6 1 ATOM 33 O O6 . DG A 1 2 ? 11.450 14.742 18.248 1.00 10.88 ? 2 DG A O6 1 ATOM 34 N N1 . DG A 1 2 ? 13.698 14.440 18.382 1.00 10.47 ? 2 DG A N1 1 ATOM 35 C C2 . DG A 1 2 ? 14.953 14.947 18.526 1.00 10.62 ? 2 DG A C2 1 ATOM 36 N N2 . DG A 1 2 ? 16.002 14.115 18.515 1.00 10.27 ? 2 DG A N2 1 ATOM 37 N N3 . DG A 1 2 ? 15.246 16.225 18.681 1.00 10.86 ? 2 DG A N3 1 ATOM 38 C C4 . DG A 1 2 ? 14.175 17.004 18.638 1.00 11.48 ? 2 DG A C4 1 ATOM 39 P P . DA A 1 3 ? 18.346 21.870 17.194 1.00 19.03 ? 3 DA A P 1 ATOM 40 O OP1 . DA A 1 3 ? 18.992 22.645 18.269 1.00 18.12 ? 3 DA A OP1 1 ATOM 41 O OP2 . DA A 1 3 ? 17.382 22.191 16.108 1.00 19.27 ? 3 DA A OP2 1 ATOM 42 O "O5'" . DA A 1 3 ? 19.472 20.871 16.632 1.00 15.52 ? 3 DA A "O5'" 1 ATOM 43 C "C5'" . DA A 1 3 ? 20.231 20.076 17.584 1.00 14.40 ? 3 DA A "C5'" 1 ATOM 44 C "C4'" . DA A 1 3 ? 20.440 18.727 16.926 1.00 14.14 ? 3 DA A "C4'" 1 ATOM 45 O "O4'" . DA A 1 3 ? 19.300 17.935 17.098 1.00 13.78 ? 3 DA A "O4'" 1 ATOM 46 C "C3'" . DA A 1 3 ? 20.707 18.792 15.429 1.00 13.97 ? 3 DA A "C3'" 1 ATOM 47 O "O3'" . DA A 1 3 ? 21.960 18.208 15.129 1.00 14.65 ? 3 DA A "O3'" 1 ATOM 48 C "C2'" . DA A 1 3 ? 19.562 18.053 14.776 1.00 13.82 ? 3 DA A "C2'" 1 ATOM 49 C "C1'" . DA A 1 3 ? 18.987 17.224 15.905 1.00 13.33 ? 3 DA A "C1'" 1 ATOM 50 N N9 . DA A 1 3 ? 17.537 17.131 15.701 1.00 12.81 ? 3 DA A N9 1 ATOM 51 C C8 . DA A 1 3 ? 16.617 18.155 15.733 1.00 12.60 ? 3 DA A C8 1 ATOM 52 N N7 . DA A 1 3 ? 15.385 17.763 15.503 1.00 12.53 ? 3 DA A N7 1 ATOM 53 C C5 . DA A 1 3 ? 15.520 16.383 15.316 1.00 12.35 ? 3 DA A C5 1 ATOM 54 C C6 . DA A 1 3 ? 14.555 15.390 15.017 1.00 12.33 ? 3 DA A C6 1 ATOM 55 N N6 . DA A 1 3 ? 13.258 15.605 14.904 1.00 12.16 ? 3 DA A N6 1 ATOM 56 N N1 . DA A 1 3 ? 15.072 14.129 14.926 1.00 11.97 ? 3 DA A N1 1 ATOM 57 C C2 . DA A 1 3 ? 16.394 13.850 15.054 1.00 11.96 ? 3 DA A C2 1 ATOM 58 N N3 . DA A 1 3 ? 17.354 14.744 15.300 1.00 12.17 ? 3 DA A N3 1 ATOM 59 C C4 . DA A 1 3 ? 16.832 15.994 15.423 1.00 12.49 ? 3 DA A C4 1 ATOM 60 P P . DT A 1 4 ? 22.595 18.222 13.631 1.00 17.22 ? 4 DT A P 1 ATOM 61 O OP1 . DT A 1 4 ? 24.005 18.417 14.011 1.00 18.78 ? 4 DT A OP1 1 ATOM 62 O OP2 . DT A 1 4 ? 21.717 19.142 12.887 1.00 18.16 ? 4 DT A OP2 1 ATOM 63 O "O5'" . DT A 1 4 ? 22.307 16.758 13.107 1.00 14.80 ? 4 DT A "O5'" 1 ATOM 64 C "C5'" . DT A 1 4 ? 22.465 15.551 13.866 1.00 14.16 ? 4 DT A "C5'" 1 ATOM 65 C "C4'" . DT A 1 4 ? 22.002 14.414 12.973 1.00 14.18 ? 4 DT A "C4'" 1 ATOM 66 O "O4'" . DT A 1 4 ? 20.603 14.287 13.080 1.00 13.86 ? 4 DT A "O4'" 1 ATOM 67 C "C3'" . DT A 1 4 ? 22.310 14.513 11.475 1.00 14.11 ? 4 DT A "C3'" 1 ATOM 68 O "O3'" . DT A 1 4 ? 22.908 13.286 11.085 1.00 14.19 ? 4 DT A "O3'" 1 ATOM 69 C "C2'" . DT A 1 4 ? 20.975 14.733 10.790 1.00 13.88 ? 4 DT A "C2'" 1 ATOM 70 C "C1'" . DT A 1 4 ? 20.022 14.129 11.780 1.00 13.76 ? 4 DT A "C1'" 1 ATOM 71 N N1 . DT A 1 4 ? 18.739 14.860 11.801 1.00 13.55 ? 4 DT A N1 1 ATOM 72 C C2 . DT A 1 4 ? 17.624 14.028 11.796 1.00 13.44 ? 4 DT A C2 1 ATOM 73 O O2 . DT A 1 4 ? 17.757 12.801 11.748 1.00 13.75 ? 4 DT A O2 1 ATOM 74 N N3 . DT A 1 4 ? 16.426 14.626 11.844 1.00 13.20 ? 4 DT A N3 1 ATOM 75 C C4 . DT A 1 4 ? 16.251 15.966 11.908 1.00 13.26 ? 4 DT A C4 1 ATOM 76 O O4 . DT A 1 4 ? 15.072 16.417 11.946 1.00 12.85 ? 4 DT A O4 1 ATOM 77 C C5 . DT A 1 4 ? 17.413 16.806 11.962 1.00 13.28 ? 4 DT A C5 1 ATOM 78 C C7 . DT A 1 4 ? 17.260 18.290 12.048 1.00 13.22 ? 4 DT A C7 1 ATOM 79 C C6 . DT A 1 4 ? 18.617 16.200 11.898 1.00 13.33 ? 4 DT A C6 1 ATOM 80 P P . DC A 1 5 ? 23.734 12.993 9.742 1.00 16.14 ? 5 DC A P 1 ATOM 81 O OP1 . DC A 1 5 ? 24.535 11.782 10.138 1.00 16.11 ? 5 DC A OP1 1 ATOM 82 O OP2 . DC A 1 5 ? 24.366 14.251 9.389 1.00 17.67 ? 5 DC A OP2 1 ATOM 83 O "O5'" . DC A 1 5 ? 22.606 12.474 8.763 1.00 14.20 ? 5 DC A "O5'" 1 ATOM 84 C "C5'" . DC A 1 5 ? 22.217 11.074 8.768 1.00 13.44 ? 5 DC A "C5'" 1 ATOM 85 C "C4'" . DC A 1 5 ? 20.990 11.049 7.885 1.00 13.37 ? 5 DC A "C4'" 1 ATOM 86 O "O4'" . DC A 1 5 ? 20.025 11.921 8.522 1.00 13.07 ? 5 DC A "O4'" 1 ATOM 87 C "C3'" . DC A 1 5 ? 21.139 11.568 6.473 1.00 13.46 ? 5 DC A "C3'" 1 ATOM 88 O "O3'" . DC A 1 5 ? 20.454 10.753 5.526 1.00 13.81 ? 5 DC A "O3'" 1 ATOM 89 C "C2'" . DC A 1 5 ? 20.459 12.950 6.527 1.00 13.08 ? 5 DC A "C2'" 1 ATOM 90 C "C1'" . DC A 1 5 ? 19.322 12.598 7.527 1.00 12.62 ? 5 DC A "C1'" 1 ATOM 91 N N1 . DC A 1 5 ? 18.609 13.822 7.880 1.00 12.21 ? 5 DC A N1 1 ATOM 92 C C2 . DC A 1 5 ? 17.235 13.689 8.094 1.00 11.82 ? 5 DC A C2 1 ATOM 93 O O2 . DC A 1 5 ? 16.730 12.572 8.030 1.00 11.83 ? 5 DC A O2 1 ATOM 94 N N3 . DC A 1 5 ? 16.527 14.804 8.340 1.00 11.75 ? 5 DC A N3 1 ATOM 95 C C4 . DC A 1 5 ? 17.091 16.031 8.394 1.00 11.89 ? 5 DC A C4 1 ATOM 96 N N4 . DC A 1 5 ? 16.307 17.100 8.618 1.00 11.76 ? 5 DC A N4 1 ATOM 97 C C5 . DC A 1 5 ? 18.479 16.177 8.180 1.00 11.92 ? 5 DC A C5 1 ATOM 98 C C6 . DC A 1 5 ? 19.181 15.077 7.912 1.00 12.12 ? 5 DC A C6 1 ATOM 99 P P . DG A 1 6 ? 21.148 9.574 4.724 1.00 16.15 ? 6 DG A P 1 ATOM 100 O OP1 . DG A 1 6 ? 21.762 8.620 5.697 1.00 17.60 ? 6 DG A OP1 1 ATOM 101 O OP2 . DG A 1 6 ? 21.940 10.462 3.825 1.00 16.02 ? 6 DG A OP2 1 ATOM 102 O "O5'" . DG A 1 6 ? 20.025 8.838 3.868 1.00 13.66 ? 6 DG A "O5'" 1 ATOM 103 C "C5'" . DG A 1 6 ? 18.874 8.265 4.515 1.00 12.96 ? 6 DG A "C5'" 1 ATOM 104 C "C4'" . DG A 1 6 ? 17.977 7.721 3.435 1.00 12.67 ? 6 DG A "C4'" 1 ATOM 105 O "O4'" . DG A 1 6 ? 17.117 8.713 2.958 1.00 12.38 ? 6 DG A "O4'" 1 ATOM 106 C "C3'" . DG A 1 6 ? 18.634 7.193 2.167 1.00 12.40 ? 6 DG A "C3'" 1 ATOM 107 O "O3'" . DG A 1 6 ? 17.861 6.076 1.717 1.00 13.05 ? 6 DG A "O3'" 1 ATOM 108 C "C2'" . DG A 1 6 ? 18.609 8.375 1.209 1.00 12.17 ? 6 DG A "C2'" 1 ATOM 109 C "C1'" . DG A 1 6 ? 17.294 9.004 1.557 1.00 11.63 ? 6 DG A "C1'" 1 ATOM 110 N N9 . DG A 1 6 ? 17.323 10.471 1.482 1.00 10.97 ? 6 DG A N9 1 ATOM 111 C C8 . DG A 1 6 ? 18.425 11.280 1.519 1.00 10.84 ? 6 DG A C8 1 ATOM 112 N N7 . DG A 1 6 ? 18.149 12.550 1.541 1.00 10.63 ? 6 DG A N7 1 ATOM 113 C C5 . DG A 1 6 ? 16.747 12.586 1.541 1.00 10.19 ? 6 DG A C5 1 ATOM 114 C C6 . DG A 1 6 ? 15.864 13.687 1.509 1.00 9.88 ? 6 DG A C6 1 ATOM 115 O O6 . DG A 1 6 ? 16.183 14.868 1.546 1.00 9.66 ? 6 DG A O6 1 ATOM 116 N N1 . DG A 1 6 ? 14.541 13.340 1.525 1.00 9.39 ? 6 DG A N1 1 ATOM 117 C C2 . DG A 1 6 ? 14.141 12.048 1.530 1.00 9.39 ? 6 DG A C2 1 ATOM 118 N N2 . DG A 1 6 ? 12.843 11.805 1.509 1.00 9.10 ? 6 DG A N2 1 ATOM 119 N N3 . DG A 1 6 ? 14.936 10.970 1.519 1.00 9.91 ? 6 DG A N3 1 ATOM 120 C C4 . DG A 1 6 ? 16.239 11.331 1.514 1.00 10.46 ? 6 DG A C4 1 HETATM 121 C C1 . DMM B 2 . ? 15.427 18.236 5.157 1.00 13.96 ? 7 DMM A C1 1 HETATM 122 C C2 . DMM B 2 . ? 16.606 18.990 5.189 1.00 13.97 ? 7 DMM A C2 1 HETATM 123 C C3 . DMM B 2 . ? 17.918 18.307 5.120 1.00 14.21 ? 7 DMM A C3 1 HETATM 124 C C4 . DMM B 2 . ? 17.940 16.846 4.986 1.00 14.38 ? 7 DMM A C4 1 HETATM 125 O O4 . DMM B 2 . ? 19.032 16.098 4.900 1.00 14.83 ? 7 DMM A O4 1 HETATM 126 C C5 . DMM B 2 . ? 16.682 16.169 4.981 1.00 14.09 ? 7 DMM A C5 1 HETATM 127 C C6 . DMM B 2 . ? 16.677 14.674 4.895 1.00 14.06 ? 7 DMM A C6 1 HETATM 128 O O6 . DMM B 2 . ? 17.658 13.890 4.809 1.00 14.37 ? 7 DMM A O6 1 HETATM 129 C C7 . DMM B 2 . ? 15.365 13.969 4.874 1.00 14.05 ? 7 DMM A C7 1 HETATM 130 C C8 . DMM B 2 . ? 15.323 12.586 4.772 1.00 14.13 ? 7 DMM A C8 1 HETATM 131 O O8 . DMM B 2 . ? 16.369 11.791 4.713 1.00 14.33 ? 7 DMM A O8 1 HETATM 132 C C9 . DMM B 2 . ? 14.025 11.991 4.751 1.00 14.51 ? 7 DMM A C9 1 HETATM 133 C C10 . DMM B 2 . ? 14.011 10.423 4.660 1.00 14.89 ? 7 DMM A C10 1 HETATM 134 O O10 . DMM B 2 . ? 14.631 10.132 5.949 1.00 15.61 ? 7 DMM A O10 1 HETATM 135 C C11 . DMM B 2 . ? 12.646 9.836 4.521 1.00 14.96 ? 7 DMM A C11 1 HETATM 136 C C12 . DMM B 2 . ? 11.599 10.572 5.323 1.00 15.08 ? 7 DMM A C12 1 HETATM 137 O O12 . DMM B 2 . ? 11.881 10.570 6.735 1.00 15.12 ? 7 DMM A O12 1 HETATM 138 C C13 . DMM B 2 . ? 10.237 9.915 5.200 1.00 15.57 ? 7 DMM A C13 1 HETATM 139 O O13 . DMM B 2 . ? 9.729 10.146 4.114 1.00 15.81 ? 7 DMM A O13 1 HETATM 140 C C14 . DMM B 2 . ? 9.627 8.801 6.077 1.00 16.02 ? 7 DMM A C14 1 HETATM 141 O O14 . DMM B 2 . ? 8.406 8.180 5.606 1.00 16.54 ? 7 DMM A O14 1 HETATM 142 C C15 . DMM B 2 . ? 11.475 12.079 4.841 1.00 14.78 ? 7 DMM A C15 1 HETATM 143 C C16 . DMM B 2 . ? 12.806 12.660 4.841 1.00 14.30 ? 7 DMM A C16 1 HETATM 144 C C17 . DMM B 2 . ? 12.897 14.065 4.948 1.00 14.14 ? 7 DMM A C17 1 HETATM 145 O O17 . DMM B 2 . ? 11.743 14.818 5.023 1.00 13.84 ? 7 DMM A O17 1 HETATM 146 C C18 . DMM B 2 . ? 14.104 14.775 4.954 1.00 13.96 ? 7 DMM A C18 1 HETATM 147 C C19 . DMM B 2 . ? 14.180 16.214 5.045 1.00 13.96 ? 7 DMM A C19 1 HETATM 148 O O19 . DMM B 2 . ? 13.184 16.919 5.120 1.00 14.10 ? 7 DMM A O19 1 HETATM 149 C C20 . DMM B 2 . ? 15.492 16.837 5.050 1.00 14.01 ? 7 DMM A C20 1 HETATM 150 C C21 . DMM B 2 . ? 20.363 16.823 4.916 1.00 14.73 ? 7 DMM A C21 1 HETATM 151 C "C1'" . DMM B 2 . ? 15.334 8.925 6.072 1.00 16.46 ? 7 DMM A "C1'" 1 HETATM 152 C "C2'" . DMM B 2 . ? 16.273 8.990 7.222 1.00 16.95 ? 7 DMM A "C2'" 1 HETATM 153 C "C3'" . DMM B 2 . ? 15.509 8.759 8.543 1.00 17.47 ? 7 DMM A "C3'" 1 HETATM 154 C "C4'" . DMM B 2 . ? 14.694 7.444 8.453 1.00 17.21 ? 7 DMM A "C4'" 1 HETATM 155 O "O4'" . DMM B 2 . ? 15.667 6.361 8.287 1.00 17.28 ? 7 DMM A "O4'" 1 HETATM 156 C "C5'" . DMM B 2 . ? 13.636 7.647 7.399 1.00 17.08 ? 7 DMM A "C5'" 1 HETATM 157 O "O5'" . DMM B 2 . ? 14.355 7.845 6.099 1.00 16.74 ? 7 DMM A "O5'" 1 HETATM 158 C "C6'" . DMM B 2 . ? 12.719 6.423 7.131 1.00 16.96 ? 7 DMM A "C6'" 1 HETATM 159 N "N3'" . DMM B 2 . ? 16.538 8.626 9.624 1.00 17.99 ? 7 DMM A "N3'" 1 HETATM 160 C C33 . DMM B 2 . ? 17.165 9.921 9.715 1.00 18.28 ? 7 DMM A C33 1 HETATM 161 C C23 . DMM B 2 . ? 18.135 9.980 10.929 1.00 18.85 ? 7 DMM A C23 1 HETATM 162 O O16 . DMM B 2 . ? 17.449 9.509 12.101 1.00 18.98 ? 7 DMM A O16 1 HETATM 163 C C63 . DMM B 2 . ? 16.936 8.144 12.015 1.00 18.73 ? 7 DMM A C63 1 HETATM 164 C C53 . DMM B 2 . ? 15.952 8.076 10.790 1.00 18.39 ? 7 DMM A C53 1 HETATM 165 O O23 . DMM B 2 . ? 19.387 9.345 10.608 1.00 19.27 ? 7 DMM A O23 1 HETATM 166 C C73 A DMM B 2 . ? 19.613 8.000 10.940 0.50 19.18 ? 7 DMM A C73 1 HETATM 167 C C73 B DMM B 2 . ? 20.389 9.269 11.609 0.50 19.19 ? 7 DMM A C73 1 HETATM 168 O O . HOH C 3 . ? 8.601 14.947 12.101 1.00 40.31 ? 8 HOH A O 1 HETATM 169 O O . HOH C 3 . ? 13.641 18.685 11.593 1.00 32.55 ? 9 HOH A O 1 HETATM 170 O O . HOH C 3 . ? 21.145 18.600 10.394 1.00 36.11 ? 10 HOH A O 1 HETATM 171 O O . HOH C 3 . ? 11.199 18.871 9.319 1.00 39.55 ? 11 HOH A O 1 HETATM 172 O O . HOH C 3 . ? 18.665 19.413 8.511 1.00 31.98 ? 12 HOH A O 1 HETATM 173 O O . HOH C 3 . ? 11.619 20.346 5.847 1.00 48.23 ? 13 HOH A O 1 HETATM 174 O O . HOH C 3 . ? 19.873 14.411 2.584 1.00 15.38 ? 14 HOH A O 1 HETATM 175 O O . HOH C 3 . ? 15.746 19.514 1.578 1.00 36.49 ? 15 HOH A O 1 HETATM 176 O O . HOH C 3 . ? 17.856 16.919 1.150 1.00 19.54 ? 16 HOH A O 1 HETATM 177 O O . HOH C 3 . ? 8.925 12.034 1.717 1.00 35.07 ? 17 HOH A O 1 HETATM 178 O O . HOH C 3 . ? 11.289 9.297 1.070 1.00 25.27 ? 18 HOH A O 1 HETATM 179 O O . HOH C 3 . ? 14.048 8.344 1.455 1.00 18.93 ? 19 HOH A O 1 HETATM 180 O O . HOH C 3 . ? 21.856 11.249 0.990 1.00 42.38 ? 20 HOH A O 1 HETATM 181 O O . HOH C 3 . ? 14.646 4.178 10.411 1.00 43.04 ? 21 HOH A O 1 HETATM 182 O O . HOH C 3 . ? 12.149 2.965 10.223 1.00 40.79 ? 22 HOH A O 1 HETATM 183 O O . HOH C 3 . ? 14.237 20.448 8.431 1.00 41.84 ? 23 HOH A O 1 HETATM 184 O O . HOH C 3 . ? 22.493 15.746 7.367 1.00 24.13 ? 24 HOH A O 1 HETATM 185 O O . HOH C 3 . ? 10.389 3.960 8.142 1.00 32.38 ? 25 HOH A O 1 HETATM 186 O O . HOH C 3 . ? 24.008 14.248 5.130 1.00 43.58 ? 26 HOH A O 1 HETATM 187 O O . HOH C 3 . ? 14.203 5.983 3.584 1.00 33.33 ? 27 HOH A O 1 HETATM 188 O O . HOH C 3 . ? 18.894 21.255 -1.498 1.00 51.61 ? 28 HOH A O 1 HETATM 189 O O . HOH C 3 . ? 10.801 6.733 1.193 1.00 45.57 ? 29 HOH A O 1 HETATM 190 O O . HOH C 3 . ? 14.093 6.420 -0.294 1.00 39.76 ? 30 HOH A O 1 HETATM 191 O O . HOH C 3 . ? 16.200 22.600 0.187 1.00 36.55 ? 31 HOH A O 1 HETATM 192 O O . HOH C 3 . ? 18.420 5.323 6.575 1.00 40.97 ? 32 HOH A O 1 HETATM 193 O O . HOH C 3 . ? 17.190 3.430 4.130 1.00 46.43 ? 33 HOH A O 1 HETATM 194 O O . HOH C 3 . ? 21.421 23.915 16.134 1.00 35.54 ? 34 HOH A O 1 HETATM 195 O O . HOH C 3 . ? 12.259 22.047 0.540 1.00 53.64 ? 35 HOH A O 1 HETATM 196 O O . HOH C 3 . ? 14.908 26.222 5.970 1.00 49.77 ? 36 HOH A O 1 HETATM 197 O O . HOH C 3 . ? 9.495 17.517 11.534 1.00 54.06 ? 37 HOH A O 1 HETATM 198 O O . HOH C 3 . ? 5.605 14.417 11.047 1.00 47.20 ? 38 HOH A O 1 HETATM 199 O O . HOH C 3 . ? 24.919 9.452 6.623 1.00 34.47 ? 39 HOH A O 1 HETATM 200 O O . HOH C 3 . ? 7.269 3.571 6.644 1.00 35.71 ? 40 HOH A O 1 HETATM 201 O O . HOH C 3 . ? 11.667 3.106 4.981 1.00 37.91 ? 41 HOH A O 1 HETATM 202 O O . HOH C 3 . ? 22.566 7.467 8.538 1.00 38.99 ? 42 HOH A O 1 HETATM 203 O O . HOH C 3 . ? 9.399 6.493 3.927 1.00 37.42 ? 43 HOH A O 1 HETATM 204 O O . HOH C 3 . ? 23.289 18.186 3.285 1.00 39.07 ? 44 HOH A O 1 HETATM 205 O O . HOH C 3 . ? 6.767 9.862 2.172 1.00 37.18 ? 45 HOH A O 1 #