data_260D # _entry.id 260D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 260D pdb_0000260d 10.2210/pdb260d/pdb RCSB ADJ075 ? ? WWPDB D_1000177672 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-06-27 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 260D _pdbx_database_status.recvd_initial_deposition_date 1996-05-21 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ban, C.' 1 'Sundaralingam, M.' 2 # _citation.id primary _citation.title ;Crystal structure of the self-complementary 5'-purine start decamer d(GCACGCGTGC) in the A-DNA conformation. II. ; _citation.journal_abbrev Biophys.J. _citation.journal_volume 71 _citation.page_first 1222 _citation.page_last 1227 _citation.year 1996 _citation.journal_id_ASTM BIOJAU _citation.country US _citation.journal_id_ISSN 0006-3495 _citation.journal_id_CSD 0030 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8873996 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ban, C.' 1 ? primary 'Sundaralingam, M.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat ;DNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*TP*GP*C)-3') ; 3045.993 1 ? ? ? ? 2 water nat water 18.015 41 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DA)(DC)(DG)(DC)(DG)(DT)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCACGCGTGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DA n 1 4 DC n 1 5 DG n 1 6 DC n 1 7 DG n 1 8 DT n 1 9 DG n 1 10 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DC 10 10 10 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 11 11 HOH HOH A . B 2 HOH 2 12 12 HOH HOH A . B 2 HOH 3 13 13 HOH HOH A . B 2 HOH 4 14 14 HOH HOH A . B 2 HOH 5 15 15 HOH HOH A . B 2 HOH 6 16 16 HOH HOH A . B 2 HOH 7 17 17 HOH HOH A . B 2 HOH 8 18 18 HOH HOH A . B 2 HOH 9 19 19 HOH HOH A . B 2 HOH 10 20 20 HOH HOH A . B 2 HOH 11 21 21 HOH HOH A . B 2 HOH 12 22 22 HOH HOH A . B 2 HOH 13 23 23 HOH HOH A . B 2 HOH 14 24 24 HOH HOH A . B 2 HOH 15 25 25 HOH HOH A . B 2 HOH 16 26 26 HOH HOH A . B 2 HOH 17 27 27 HOH HOH A . B 2 HOH 18 28 28 HOH HOH A . B 2 HOH 19 29 29 HOH HOH A . B 2 HOH 20 30 30 HOH HOH A . B 2 HOH 21 31 31 HOH HOH A . B 2 HOH 22 32 32 HOH HOH A . B 2 HOH 23 33 33 HOH HOH A . B 2 HOH 24 34 34 HOH HOH A . B 2 HOH 25 35 35 HOH HOH A . B 2 HOH 26 36 36 HOH HOH A . B 2 HOH 27 37 37 HOH HOH A . B 2 HOH 28 38 38 HOH HOH A . B 2 HOH 29 39 39 HOH HOH A . B 2 HOH 30 40 40 HOH HOH A . B 2 HOH 31 41 41 HOH HOH A . B 2 HOH 32 42 42 HOH HOH A . B 2 HOH 33 43 43 HOH HOH A . B 2 HOH 34 44 44 HOH HOH A . B 2 HOH 35 45 45 HOH HOH A . B 2 HOH 36 46 46 HOH HOH A . B 2 HOH 37 47 47 HOH HOH A . B 2 HOH 38 48 48 HOH HOH A . B 2 HOH 39 49 49 HOH HOH A . B 2 HOH 40 50 50 HOH HOH A . B 2 HOH 41 51 51 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement . ? 1 XENGEN 'data reduction' 'V. 2.0' ? 2 # _cell.entry_id 260D _cell.length_a 38.970 _cell.length_b 38.970 _cell.length_c 77.340 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 260D _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 260D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_percent_sol 55.80 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details 'ROOM TEMPERATURE' _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'NA CACODYLATE' ? ? ? 1 4 1 '[CO(NH3)6]3+' ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details 'ROOM TEMPERATURE' _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS-NICOLET _diffrn_detector.pdbx_collection_date 1994-12-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type MACSCIENCE _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 260D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.000 _reflns.d_resolution_low 8.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 2634 _reflns.number_all 9346 _reflns.percent_possible_obs 91.000 _reflns.pdbx_Rmerge_I_obs 0.0310000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.500 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 260D _refine.ls_number_reflns_obs 2491 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1860000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1860000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 243 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.50 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 32.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 3.20 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file PARAM_NDB.DNA _pdbx_xplor_file.topol_file ? _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 260D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 260D _struct.title ;CRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART II ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 260D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 260D _struct_ref.pdbx_db_accession 260D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 260D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 260D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 38.6700000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 3 A DT 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 3 A DT 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 4 A DG 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 4 A DG 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 4 A DG 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 4 N3 ? ? A DG 7 A DC 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 4 O2 ? ? A DG 7 A DC 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 4 N4 ? ? A DG 7 A DC 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 8 A DA 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 8 A DA 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.70 108.30 2.40 0.30 N 2 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.68 108.30 4.38 0.30 N 3 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.15 118.90 4.25 0.60 N 4 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.37 121.90 -4.53 0.70 N 5 1 "O3'" A DC 2 ? ? P A DA 3 ? ? OP2 A DA 3 ? ? 117.24 110.50 6.74 1.10 Y 6 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.57 108.30 2.27 0.30 N 7 1 "O3'" A DA 3 ? ? P A DC 4 ? ? OP2 A DC 4 ? ? 125.28 110.50 14.78 1.10 Y 8 1 "C4'" A DC 4 ? ? "C3'" A DC 4 ? ? "C2'" A DC 4 ? ? 96.24 102.20 -5.96 0.70 N 9 1 "O3'" A DC 4 ? ? P A DG 5 ? ? OP2 A DG 5 ? ? 135.81 110.50 25.31 1.10 Y 10 1 "O3'" A DC 4 ? ? P A DG 5 ? ? OP1 A DG 5 ? ? 77.08 105.20 -28.12 2.20 Y 11 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.68 108.30 5.38 0.30 N 12 1 "O3'" A DG 5 ? ? P A DC 6 ? ? "O5'" A DC 6 ? ? 91.70 104.00 -12.30 1.90 Y 13 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP2 A DC 6 ? ? 120.06 110.50 9.56 1.10 Y 14 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.72 108.30 2.42 0.30 N 15 1 "O3'" A DC 6 ? ? P A DG 7 ? ? "O5'" A DG 7 ? ? 90.76 104.00 -13.24 1.90 Y 16 1 "O3'" A DC 6 ? ? P A DG 7 ? ? OP2 A DG 7 ? ? 118.48 110.50 7.98 1.10 Y 17 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.96 108.30 2.66 0.30 N 18 1 "O4'" A DT 8 ? ? "C4'" A DT 8 ? ? "C3'" A DT 8 ? ? 101.58 104.50 -2.92 0.40 N 19 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.47 122.90 -5.43 0.60 N 20 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 112.37 108.30 4.07 0.30 N 21 1 N3 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 116.18 121.90 -5.72 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.073 'SIDE CHAIN' 2 1 DT A 8 ? ? 0.067 'SIDE CHAIN' # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 13 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TF isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TF isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 260D _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 10 11_555 -0.447 -0.262 -0.240 -8.937 -7.117 -0.971 1 A_DG1:DC10_A A 1 ? A 10 ? 19 1 1 A DC 2 1_555 A DG 9 11_555 -0.016 -0.277 0.130 2.567 -11.024 2.849 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1 1 A DA 3 1_555 A DT 8 11_555 0.049 -0.295 0.046 5.326 -11.071 6.758 3 A_DA3:DT8_A A 3 ? A 8 ? 20 1 1 A DC 4 1_555 A DG 7 11_555 0.047 -0.273 -0.014 7.377 -14.707 -1.875 4 A_DC4:DG7_A A 4 ? A 7 ? 19 1 1 A DG 5 1_555 A DC 6 11_555 0.082 -0.319 0.107 1.075 -16.337 -3.331 5 A_DG5:DC6_A A 5 ? A 6 ? 19 1 1 A DC 6 1_555 A DG 5 11_555 -0.082 -0.319 0.107 -1.074 -16.337 -3.331 6 A_DC6:DG5_A A 6 ? A 5 ? 19 1 1 A DG 7 1_555 A DC 4 11_555 -0.047 -0.273 -0.014 -7.377 -14.707 -1.875 7 A_DG7:DC4_A A 7 ? A 4 ? 19 1 1 A DT 8 1_555 A DA 3 11_555 -0.049 -0.295 0.046 -5.326 -11.071 6.758 8 A_DT8:DA3_A A 8 ? A 3 ? 20 1 1 A DG 9 1_555 A DC 2 11_555 0.016 -0.277 0.130 -2.567 -11.024 2.849 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1 1 A DC 10 1_555 A DG 1 11_555 0.447 -0.262 -0.240 8.937 -7.117 -0.971 10 A_DC10:DG1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 10 11_555 A DC 2 1_555 A DG 9 11_555 0.061 -1.051 3.076 -3.111 7.924 33.235 -2.909 -0.545 2.743 13.579 5.331 34.278 1 AA_DG1DC2:DG9DC10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DC 2 1_555 A DG 9 11_555 A DA 3 1_555 A DT 8 11_555 0.040 -0.930 3.274 0.601 7.223 30.519 -3.040 0.036 2.982 13.483 -1.122 31.348 2 AA_DC2DA3:DT8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DA 3 1_555 A DT 8 11_555 A DC 4 1_555 A DG 7 11_555 -0.267 -1.247 3.365 -0.433 4.861 32.652 -3.022 0.396 3.155 8.585 0.766 33.005 3 AA_DA3DC4:DG7DT8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DC 4 1_555 A DG 7 11_555 A DG 5 1_555 A DC 6 11_555 -0.786 -1.745 3.348 -4.195 18.679 28.849 -5.528 0.744 1.980 33.269 7.471 34.511 4 AA_DC4DG5:DC6DG7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DG 5 1_555 A DC 6 11_555 A DC 6 1_555 A DG 5 11_555 0.000 -1.623 3.288 0.000 6.442 34.425 -3.630 0.000 2.945 10.767 0.000 35.005 5 AA_DG5DC6:DG5DC6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DC 6 1_555 A DG 5 11_555 A DG 7 1_555 A DC 4 11_555 0.786 -1.745 3.348 4.195 18.679 28.849 -5.528 -0.744 1.980 33.269 -7.471 34.511 6 AA_DC6DG7:DC4DG5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DG 7 1_555 A DC 4 11_555 A DT 8 1_555 A DA 3 11_555 0.267 -1.247 3.365 0.433 4.861 32.652 -3.022 -0.396 3.155 8.586 -0.766 33.005 7 AA_DG7DT8:DA3DC4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DT 8 1_555 A DA 3 11_555 A DG 9 1_555 A DC 2 11_555 -0.040 -0.930 3.274 -0.601 7.223 30.519 -3.040 -0.036 2.982 13.483 1.122 31.348 8 AA_DT8DG9:DC2DA3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DG 9 1_555 A DC 2 11_555 A DC 10 1_555 A DG 1 11_555 -0.061 -1.051 3.076 3.111 7.924 33.235 -2.909 0.545 2.743 13.579 -5.331 34.278 9 AA_DG9DC10:DG1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _atom_sites.entry_id 260D _atom_sites.fract_transf_matrix[1][1] 0.025661 _atom_sites.fract_transf_matrix[1][2] 0.014815 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029630 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012930 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? -9.049 20.370 16.622 1.00 50.98 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -8.870 18.969 16.372 1.00 38.71 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -8.245 18.670 15.021 1.00 36.90 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -8.989 19.238 13.943 1.00 32.18 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -6.903 19.261 14.884 1.00 33.89 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -6.002 18.454 15.584 1.00 39.84 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -6.742 19.183 13.397 1.00 31.67 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -8.084 19.635 12.904 1.00 28.97 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -8.167 21.093 12.667 1.00 27.13 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? -8.881 22.042 13.353 1.00 30.18 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? -8.864 23.223 12.810 1.00 32.27 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? -8.089 23.057 11.682 1.00 27.85 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? -7.739 24.002 10.709 1.00 28.65 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? -8.124 25.167 10.604 1.00 30.29 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? -6.934 23.432 9.756 1.00 26.43 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? -6.539 22.113 9.736 1.00 25.39 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? -5.736 21.721 8.759 1.00 27.75 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? -6.883 21.220 10.643 1.00 25.35 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? -7.658 21.763 11.588 1.00 26.23 ? 1 DG A C4 1 ATOM 20 P P . DC A 1 2 ? -4.751 19.136 16.289 1.00 40.98 ? 2 DC A P 1 ATOM 21 O OP1 . DC A 1 2 ? -4.211 18.078 17.125 1.00 49.40 ? 2 DC A OP1 1 ATOM 22 O OP2 . DC A 1 2 ? -5.395 20.333 16.904 1.00 43.23 ? 2 DC A OP2 1 ATOM 23 O "O5'" . DC A 1 2 ? -3.651 19.569 15.251 1.00 39.38 ? 2 DC A "O5'" 1 ATOM 24 C "C5'" . DC A 1 2 ? -3.032 18.526 14.516 1.00 39.22 ? 2 DC A "C5'" 1 ATOM 25 C "C4'" . DC A 1 2 ? -2.418 19.093 13.243 1.00 41.87 ? 2 DC A "C4'" 1 ATOM 26 O "O4'" . DC A 1 2 ? -3.409 19.706 12.412 1.00 35.74 ? 2 DC A "O4'" 1 ATOM 27 C "C3'" . DC A 1 2 ? -1.420 20.206 13.555 1.00 42.52 ? 2 DC A "C3'" 1 ATOM 28 O "O3'" . DC A 1 2 ? -0.159 19.635 13.908 1.00 45.17 ? 2 DC A "O3'" 1 ATOM 29 C "C2'" . DC A 1 2 ? -1.401 20.854 12.212 1.00 39.74 ? 2 DC A "C2'" 1 ATOM 30 C "C1'" . DC A 1 2 ? -2.842 20.864 11.780 1.00 35.53 ? 2 DC A "C1'" 1 ATOM 31 N N1 . DC A 1 2 ? -3.547 22.117 12.144 1.00 27.78 ? 2 DC A N1 1 ATOM 32 C C2 . DC A 1 2 ? -3.467 23.190 11.280 1.00 28.79 ? 2 DC A C2 1 ATOM 33 O O2 . DC A 1 2 ? -2.785 23.182 10.266 1.00 29.70 ? 2 DC A O2 1 ATOM 34 N N3 . DC A 1 2 ? -4.159 24.317 11.554 1.00 30.28 ? 2 DC A N3 1 ATOM 35 C C4 . DC A 1 2 ? -4.913 24.399 12.649 1.00 30.95 ? 2 DC A C4 1 ATOM 36 N N4 . DC A 1 2 ? -5.578 25.524 12.847 1.00 29.92 ? 2 DC A N4 1 ATOM 37 C C5 . DC A 1 2 ? -5.016 23.304 13.557 1.00 28.87 ? 2 DC A C5 1 ATOM 38 C C6 . DC A 1 2 ? -4.314 22.193 13.256 1.00 29.17 ? 2 DC A C6 1 ATOM 39 P P . DA A 1 3 ? 0.924 20.456 14.734 1.00 46.99 ? 3 DA A P 1 ATOM 40 O OP1 . DA A 1 3 ? 1.914 19.365 14.897 1.00 51.81 ? 3 DA A OP1 1 ATOM 41 O OP2 . DA A 1 3 ? 0.461 21.140 15.974 1.00 46.11 ? 3 DA A OP2 1 ATOM 42 O "O5'" . DA A 1 3 ? 1.541 21.541 13.746 1.00 41.35 ? 3 DA A "O5'" 1 ATOM 43 C "C5'" . DA A 1 3 ? 2.316 21.182 12.635 1.00 36.50 ? 3 DA A "C5'" 1 ATOM 44 C "C4'" . DA A 1 3 ? 2.437 22.347 11.699 1.00 36.99 ? 3 DA A "C4'" 1 ATOM 45 O "O4'" . DA A 1 3 ? 1.145 22.784 11.280 1.00 38.04 ? 3 DA A "O4'" 1 ATOM 46 C "C3'" . DA A 1 3 ? 3.021 23.550 12.382 1.00 38.69 ? 3 DA A "C3'" 1 ATOM 47 O "O3'" . DA A 1 3 ? 4.444 23.476 12.441 1.00 38.51 ? 3 DA A "O3'" 1 ATOM 48 C "C2'" . DA A 1 3 ? 2.544 24.611 11.410 1.00 38.24 ? 3 DA A "C2'" 1 ATOM 49 C "C1'" . DA A 1 3 ? 1.120 24.226 11.115 1.00 32.68 ? 3 DA A "C1'" 1 ATOM 50 N N9 . DA A 1 3 ? 0.175 24.842 12.071 1.00 25.27 ? 3 DA A N9 1 ATOM 51 C C8 . DA A 1 3 ? -0.397 24.318 13.213 1.00 24.94 ? 3 DA A C8 1 ATOM 52 N N7 . DA A 1 3 ? -1.353 25.040 13.725 1.00 22.27 ? 3 DA A N7 1 ATOM 53 C C5 . DA A 1 3 ? -1.395 26.125 12.848 1.00 18.88 ? 3 DA A C5 1 ATOM 54 C C6 . DA A 1 3 ? -2.167 27.283 12.844 1.00 22.81 ? 3 DA A C6 1 ATOM 55 N N6 . DA A 1 3 ? -3.187 27.455 13.678 1.00 23.87 ? 3 DA A N6 1 ATOM 56 N N1 . DA A 1 3 ? -1.908 28.200 11.902 1.00 22.82 ? 3 DA A N1 1 ATOM 57 C C2 . DA A 1 3 ? -0.943 27.952 11.010 1.00 26.17 ? 3 DA A C2 1 ATOM 58 N N3 . DA A 1 3 ? -0.165 26.880 10.906 1.00 23.47 ? 3 DA A N3 1 ATOM 59 C C4 . DA A 1 3 ? -0.456 26.004 11.866 1.00 17.72 ? 3 DA A C4 1 ATOM 60 P P . DC A 1 4 ? 5.229 24.073 13.716 1.00 40.79 ? 4 DC A P 1 ATOM 61 O OP1 . DC A 1 4 ? 6.626 23.652 13.447 1.00 49.37 ? 4 DC A OP1 1 ATOM 62 O OP2 . DC A 1 4 ? 4.754 24.015 15.116 1.00 34.93 ? 4 DC A OP2 1 ATOM 63 O "O5'" . DC A 1 4 ? 5.151 25.609 13.255 1.00 35.06 ? 4 DC A "O5'" 1 ATOM 64 C "C5'" . DC A 1 4 ? 5.949 26.064 12.194 1.00 33.50 ? 4 DC A "C5'" 1 ATOM 65 C "C4'" . DC A 1 4 ? 5.511 27.420 11.787 1.00 36.09 ? 4 DC A "C4'" 1 ATOM 66 O "O4'" . DC A 1 4 ? 4.111 27.413 11.523 1.00 34.20 ? 4 DC A "O4'" 1 ATOM 67 C "C3'" . DC A 1 4 ? 5.712 28.416 12.897 1.00 38.13 ? 4 DC A "C3'" 1 ATOM 68 O "O3'" . DC A 1 4 ? 7.067 28.812 13.023 1.00 39.58 ? 4 DC A "O3'" 1 ATOM 69 C "C2'" . DC A 1 4 ? 4.833 29.481 12.321 1.00 36.60 ? 4 DC A "C2'" 1 ATOM 70 C "C1'" . DC A 1 4 ? 3.630 28.725 11.808 1.00 33.82 ? 4 DC A "C1'" 1 ATOM 71 N N1 . DC A 1 4 ? 2.628 28.656 12.887 1.00 31.21 ? 4 DC A N1 1 ATOM 72 C C2 . DC A 1 4 ? 1.727 29.655 12.967 1.00 29.71 ? 4 DC A C2 1 ATOM 73 O O2 . DC A 1 4 ? 1.771 30.609 12.213 1.00 29.50 ? 4 DC A O2 1 ATOM 74 N N3 . DC A 1 4 ? 0.754 29.599 13.880 1.00 23.64 ? 4 DC A N3 1 ATOM 75 C C4 . DC A 1 4 ? 0.666 28.568 14.709 1.00 24.21 ? 4 DC A C4 1 ATOM 76 N N4 . DC A 1 4 ? -0.432 28.518 15.490 1.00 23.82 ? 4 DC A N4 1 ATOM 77 C C5 . DC A 1 4 ? 1.620 27.510 14.658 1.00 27.65 ? 4 DC A C5 1 ATOM 78 C C6 . DC A 1 4 ? 2.571 27.602 13.729 1.00 29.25 ? 4 DC A C6 1 ATOM 79 P P . DG A 1 5 ? 7.490 29.569 14.357 1.00 42.17 ? 5 DG A P 1 ATOM 80 O OP1 . DG A 1 5 ? 8.774 29.425 13.637 1.00 44.71 ? 5 DG A OP1 1 ATOM 81 O OP2 . DG A 1 5 ? 7.440 29.274 15.804 1.00 44.19 ? 5 DG A OP2 1 ATOM 82 O "O5'" . DG A 1 5 ? 6.927 31.079 14.201 1.00 41.31 ? 5 DG A "O5'" 1 ATOM 83 C "C5'" . DG A 1 5 ? 7.427 32.122 13.379 1.00 32.70 ? 5 DG A "C5'" 1 ATOM 84 C "C4'" . DG A 1 5 ? 6.636 33.413 13.618 1.00 30.62 ? 5 DG A "C4'" 1 ATOM 85 O "O4'" . DG A 1 5 ? 5.274 33.177 13.278 1.00 34.30 ? 5 DG A "O4'" 1 ATOM 86 C "C3'" . DG A 1 5 ? 6.573 33.818 15.086 1.00 30.68 ? 5 DG A "C3'" 1 ATOM 87 O "O3'" . DG A 1 5 ? 7.693 34.628 15.429 1.00 34.10 ? 5 DG A "O3'" 1 ATOM 88 C "C2'" . DG A 1 5 ? 5.333 34.641 15.075 1.00 26.29 ? 5 DG A "C2'" 1 ATOM 89 C "C1'" . DG A 1 5 ? 4.408 33.836 14.213 1.00 29.21 ? 5 DG A "C1'" 1 ATOM 90 N N9 . DG A 1 5 ? 3.628 32.909 15.052 1.00 25.50 ? 5 DG A N9 1 ATOM 91 C C8 . DG A 1 5 ? 3.755 31.550 15.284 1.00 24.62 ? 5 DG A C8 1 ATOM 92 N N7 . DG A 1 5 ? 2.819 31.073 16.050 1.00 24.37 ? 5 DG A N7 1 ATOM 93 C C5 . DG A 1 5 ? 2.026 32.183 16.343 1.00 23.86 ? 5 DG A C5 1 ATOM 94 C C6 . DG A 1 5 ? 0.834 32.298 17.088 1.00 23.73 ? 5 DG A C6 1 ATOM 95 O O6 . DG A 1 5 ? 0.219 31.437 17.720 1.00 22.26 ? 5 DG A O6 1 ATOM 96 N N1 . DG A 1 5 ? 0.361 33.607 17.074 1.00 18.96 ? 5 DG A N1 1 ATOM 97 C C2 . DG A 1 5 ? 0.942 34.675 16.450 1.00 17.29 ? 5 DG A C2 1 ATOM 98 N N2 . DG A 1 5 ? 0.448 35.895 16.649 1.00 20.55 ? 5 DG A N2 1 ATOM 99 N N3 . DG A 1 5 ? 2.037 34.556 15.747 1.00 21.36 ? 5 DG A N3 1 ATOM 100 C C4 . DG A 1 5 ? 2.527 33.300 15.739 1.00 22.54 ? 5 DG A C4 1 ATOM 101 P P . DC A 1 6 ? 8.336 34.527 16.876 1.00 35.34 ? 6 DC A P 1 ATOM 102 O OP1 . DC A 1 6 ? 9.588 35.294 16.934 1.00 45.50 ? 6 DC A OP1 1 ATOM 103 O OP2 . DC A 1 6 ? 8.303 33.243 17.615 1.00 36.85 ? 6 DC A OP2 1 ATOM 104 O "O5'" . DC A 1 6 ? 7.180 35.456 17.507 1.00 35.32 ? 6 DC A "O5'" 1 ATOM 105 C "C5'" . DC A 1 6 ? 7.196 36.876 17.375 1.00 23.14 ? 6 DC A "C5'" 1 ATOM 106 C "C4'" . DC A 1 6 ? 6.058 37.530 18.151 1.00 24.58 ? 6 DC A "C4'" 1 ATOM 107 O "O4'" . DC A 1 6 ? 4.828 36.990 17.720 1.00 24.00 ? 6 DC A "O4'" 1 ATOM 108 C "C3'" . DC A 1 6 ? 6.052 37.302 19.602 1.00 22.45 ? 6 DC A "C3'" 1 ATOM 109 O "O3'" . DC A 1 6 ? 6.977 38.180 20.233 1.00 34.87 ? 6 DC A "O3'" 1 ATOM 110 C "C2'" . DC A 1 6 ? 4.623 37.646 19.889 1.00 22.64 ? 6 DC A "C2'" 1 ATOM 111 C "C1'" . DC A 1 6 ? 3.862 36.988 18.776 1.00 23.41 ? 6 DC A "C1'" 1 ATOM 112 N N1 . DC A 1 6 ? 3.445 35.597 19.106 1.00 27.98 ? 6 DC A N1 1 ATOM 113 C C2 . DC A 1 6 ? 2.268 35.415 19.799 1.00 28.88 ? 6 DC A C2 1 ATOM 114 O O2 . DC A 1 6 ? 1.542 36.361 20.105 1.00 29.73 ? 6 DC A O2 1 ATOM 115 N N3 . DC A 1 6 ? 1.903 34.147 20.130 1.00 28.38 ? 6 DC A N3 1 ATOM 116 C C4 . DC A 1 6 ? 2.661 33.087 19.802 1.00 30.15 ? 6 DC A C4 1 ATOM 117 N N4 . DC A 1 6 ? 2.262 31.879 20.211 1.00 25.82 ? 6 DC A N4 1 ATOM 118 C C5 . DC A 1 6 ? 3.879 33.252 19.072 1.00 27.65 ? 6 DC A C5 1 ATOM 119 C C6 . DC A 1 6 ? 4.225 34.515 18.751 1.00 29.29 ? 6 DC A C6 1 ATOM 120 P P . DG A 1 7 ? 7.733 37.813 21.598 1.00 38.26 ? 7 DG A P 1 ATOM 121 O OP1 . DG A 1 7 ? 8.537 39.057 21.874 1.00 45.02 ? 7 DG A OP1 1 ATOM 122 O OP2 . DG A 1 7 ? 8.396 36.486 21.707 1.00 42.50 ? 7 DG A OP2 1 ATOM 123 O "O5'" . DG A 1 7 ? 6.351 37.849 22.398 1.00 28.44 ? 7 DG A "O5'" 1 ATOM 124 C "C5'" . DG A 1 7 ? 6.281 37.388 23.723 1.00 34.26 ? 7 DG A "C5'" 1 ATOM 125 C "C4'" . DG A 1 7 ? 4.917 37.682 24.190 1.00 34.21 ? 7 DG A "C4'" 1 ATOM 126 O "O4'" . DG A 1 7 ? 4.002 37.089 23.265 1.00 32.64 ? 7 DG A "O4'" 1 ATOM 127 C "C3'" . DG A 1 7 ? 4.761 36.943 25.482 1.00 37.24 ? 7 DG A "C3'" 1 ATOM 128 O "O3'" . DG A 1 7 ? 5.196 37.733 26.564 1.00 43.49 ? 7 DG A "O3'" 1 ATOM 129 C "C2'" . DG A 1 7 ? 3.300 36.650 25.494 1.00 35.21 ? 7 DG A "C2'" 1 ATOM 130 C "C1'" . DG A 1 7 ? 3.141 36.261 24.040 1.00 29.42 ? 7 DG A "C1'" 1 ATOM 131 N N9 . DG A 1 7 ? 3.313 34.849 23.686 1.00 26.77 ? 7 DG A N9 1 ATOM 132 C C8 . DG A 1 7 ? 4.230 34.230 22.887 1.00 23.60 ? 7 DG A C8 1 ATOM 133 N N7 . DG A 1 7 ? 3.952 32.977 22.674 1.00 27.32 ? 7 DG A N7 1 ATOM 134 C C5 . DG A 1 7 ? 2.789 32.743 23.373 1.00 23.82 ? 7 DG A C5 1 ATOM 135 C C6 . DG A 1 7 ? 2.069 31.548 23.578 1.00 29.85 ? 7 DG A C6 1 ATOM 136 O O6 . DG A 1 7 ? 2.292 30.457 23.082 1.00 34.99 ? 7 DG A O6 1 ATOM 137 N N1 . DG A 1 7 ? 0.992 31.712 24.443 1.00 26.56 ? 7 DG A N1 1 ATOM 138 C C2 . DG A 1 7 ? 0.651 32.909 25.034 1.00 25.63 ? 7 DG A C2 1 ATOM 139 N N2 . DG A 1 7 ? -0.440 32.961 25.784 1.00 24.36 ? 7 DG A N2 1 ATOM 140 N N3 . DG A 1 7 ? 1.336 34.032 24.838 1.00 26.42 ? 7 DG A N3 1 ATOM 141 C C4 . DG A 1 7 ? 2.389 33.878 23.998 1.00 25.76 ? 7 DG A C4 1 ATOM 142 P P . DT A 1 8 ? 5.838 37.044 27.858 1.00 40.54 ? 8 DT A P 1 ATOM 143 O OP1 . DT A 1 8 ? 6.100 38.278 28.644 1.00 40.52 ? 8 DT A OP1 1 ATOM 144 O OP2 . DT A 1 8 ? 6.959 36.271 27.292 1.00 33.72 ? 8 DT A OP2 1 ATOM 145 O "O5'" . DT A 1 8 ? 4.895 36.089 28.640 1.00 37.50 ? 8 DT A "O5'" 1 ATOM 146 C "C5'" . DT A 1 8 ? 3.813 36.680 29.330 1.00 33.81 ? 8 DT A "C5'" 1 ATOM 147 C "C4'" . DT A 1 8 ? 2.792 35.623 29.672 1.00 34.87 ? 8 DT A "C4'" 1 ATOM 148 O "O4'" . DT A 1 8 ? 2.488 34.958 28.462 1.00 37.37 ? 8 DT A "O4'" 1 ATOM 149 C "C3'" . DT A 1 8 ? 3.327 34.493 30.512 1.00 38.15 ? 8 DT A "C3'" 1 ATOM 150 O "O3'" . DT A 1 8 ? 3.281 34.804 31.878 1.00 48.81 ? 8 DT A "O3'" 1 ATOM 151 C "C2'" . DT A 1 8 ? 2.296 33.464 30.273 1.00 37.21 ? 8 DT A "C2'" 1 ATOM 152 C "C1'" . DT A 1 8 ? 2.074 33.634 28.822 1.00 34.87 ? 8 DT A "C1'" 1 ATOM 153 N N1 . DT A 1 8 ? 2.840 32.653 28.063 1.00 32.71 ? 8 DT A N1 1 ATOM 154 C C2 . DT A 1 8 ? 2.292 31.389 27.918 1.00 34.96 ? 8 DT A C2 1 ATOM 155 O O2 . DT A 1 8 ? 1.309 30.990 28.561 1.00 36.26 ? 8 DT A O2 1 ATOM 156 N N3 . DT A 1 8 ? 2.951 30.570 27.020 1.00 29.85 ? 8 DT A N3 1 ATOM 157 C C4 . DT A 1 8 ? 4.079 30.889 26.295 1.00 32.24 ? 8 DT A C4 1 ATOM 158 O O4 . DT A 1 8 ? 4.522 30.067 25.499 1.00 41.01 ? 8 DT A O4 1 ATOM 159 C C5 . DT A 1 8 ? 4.577 32.223 26.532 1.00 28.22 ? 8 DT A C5 1 ATOM 160 C C7 . DT A 1 8 ? 5.738 32.780 25.755 1.00 31.62 ? 8 DT A C7 1 ATOM 161 C C6 . DT A 1 8 ? 3.969 33.034 27.391 1.00 30.39 ? 8 DT A C6 1 ATOM 162 P P . DG A 1 9 ? 4.425 34.343 32.857 1.00 51.24 ? 9 DG A P 1 ATOM 163 O OP1 . DG A 1 9 ? 4.307 35.153 34.096 1.00 54.28 ? 9 DG A OP1 1 ATOM 164 O OP2 . DG A 1 9 ? 5.760 34.195 32.225 1.00 50.45 ? 9 DG A OP2 1 ATOM 165 O "O5'" . DG A 1 9 ? 3.985 32.843 33.186 1.00 44.76 ? 9 DG A "O5'" 1 ATOM 166 C "C5'" . DG A 1 9 ? 2.853 32.692 34.030 1.00 41.40 ? 9 DG A "C5'" 1 ATOM 167 C "C4'" . DG A 1 9 ? 2.305 31.324 33.891 1.00 39.26 ? 9 DG A "C4'" 1 ATOM 168 O "O4'" . DG A 1 9 ? 2.212 31.106 32.506 1.00 42.33 ? 9 DG A "O4'" 1 ATOM 169 C "C3'" . DG A 1 9 ? 3.281 30.280 34.336 1.00 41.81 ? 9 DG A "C3'" 1 ATOM 170 O "O3'" . DG A 1 9 ? 3.211 30.073 35.739 1.00 42.28 ? 9 DG A "O3'" 1 ATOM 171 C "C2'" . DG A 1 9 ? 2.756 29.096 33.595 1.00 38.66 ? 9 DG A "C2'" 1 ATOM 172 C "C1'" . DG A 1 9 ? 2.407 29.712 32.274 1.00 38.68 ? 9 DG A "C1'" 1 ATOM 173 N N9 . DG A 1 9 ? 3.409 29.514 31.223 1.00 31.08 ? 9 DG A N9 1 ATOM 174 C C8 . DG A 1 9 ? 4.407 30.339 30.802 1.00 26.29 ? 9 DG A C8 1 ATOM 175 N N7 . DG A 1 9 ? 5.051 29.837 29.791 1.00 26.06 ? 9 DG A N7 1 ATOM 176 C C5 . DG A 1 9 ? 4.453 28.601 29.513 1.00 29.20 ? 9 DG A C5 1 ATOM 177 C C6 . DG A 1 9 ? 4.810 27.553 28.599 1.00 31.24 ? 9 DG A C6 1 ATOM 178 O O6 . DG A 1 9 ? 5.628 27.585 27.674 1.00 36.98 ? 9 DG A O6 1 ATOM 179 N N1 . DG A 1 9 ? 4.031 26.404 28.786 1.00 32.34 ? 9 DG A N1 1 ATOM 180 C C2 . DG A 1 9 ? 3.017 26.286 29.719 1.00 33.96 ? 9 DG A C2 1 ATOM 181 N N2 . DG A 1 9 ? 2.369 25.125 29.858 1.00 28.46 ? 9 DG A N2 1 ATOM 182 N N3 . DG A 1 9 ? 2.686 27.286 30.541 1.00 31.03 ? 9 DG A N3 1 ATOM 183 C C4 . DG A 1 9 ? 3.439 28.400 30.396 1.00 29.75 ? 9 DG A C4 1 ATOM 184 P P . DC A 1 10 ? 4.578 29.669 36.472 1.00 51.81 ? 10 DC A P 1 ATOM 185 O OP1 . DC A 1 10 ? 4.384 29.933 37.925 1.00 59.61 ? 10 DC A OP1 1 ATOM 186 O OP2 . DC A 1 10 ? 5.663 30.361 35.762 1.00 50.20 ? 10 DC A OP2 1 ATOM 187 O "O5'" . DC A 1 10 ? 4.742 28.085 36.123 1.00 48.33 ? 10 DC A "O5'" 1 ATOM 188 C "C5'" . DC A 1 10 ? 3.811 27.183 36.708 1.00 43.05 ? 10 DC A "C5'" 1 ATOM 189 C "C4'" . DC A 1 10 ? 3.876 25.822 36.088 1.00 40.65 ? 10 DC A "C4'" 1 ATOM 190 O "O4'" . DC A 1 10 ? 3.557 25.886 34.690 1.00 37.82 ? 10 DC A "O4'" 1 ATOM 191 C "C3'" . DC A 1 10 ? 5.306 25.334 36.154 1.00 41.57 ? 10 DC A "C3'" 1 ATOM 192 O "O3'" . DC A 1 10 ? 5.643 24.835 37.440 1.00 46.09 ? 10 DC A "O3'" 1 ATOM 193 C "C2'" . DC A 1 10 ? 5.220 24.290 35.108 1.00 40.70 ? 10 DC A "C2'" 1 ATOM 194 C "C1'" . DC A 1 10 ? 4.385 24.946 34.036 1.00 34.18 ? 10 DC A "C1'" 1 ATOM 195 N N1 . DC A 1 10 ? 5.261 25.571 33.042 1.00 28.04 ? 10 DC A N1 1 ATOM 196 C C2 . DC A 1 10 ? 5.509 24.853 31.897 1.00 26.76 ? 10 DC A C2 1 ATOM 197 O O2 . DC A 1 10 ? 4.984 23.788 31.676 1.00 29.91 ? 10 DC A O2 1 ATOM 198 N N3 . DC A 1 10 ? 6.287 25.338 30.928 1.00 22.24 ? 10 DC A N3 1 ATOM 199 C C4 . DC A 1 10 ? 6.813 26.543 31.078 1.00 23.52 ? 10 DC A C4 1 ATOM 200 N N4 . DC A 1 10 ? 7.541 27.015 30.061 1.00 22.76 ? 10 DC A N4 1 ATOM 201 C C5 . DC A 1 10 ? 6.579 27.332 32.254 1.00 21.63 ? 10 DC A C5 1 ATOM 202 C C6 . DC A 1 10 ? 5.794 26.800 33.213 1.00 21.95 ? 10 DC A C6 1 HETATM 203 O O . HOH B 2 . ? 5.838 30.860 21.903 1.00 47.31 ? 11 HOH A O 1 HETATM 204 O O . HOH B 2 . ? -5.097 19.192 7.835 1.00 51.79 ? 12 HOH A O 1 HETATM 205 O O . HOH B 2 . ? -0.012 28.688 19.288 0.50 53.62 ? 13 HOH A O 1 HETATM 206 O O . HOH B 2 . ? 3.462 29.086 17.628 1.00 55.12 ? 14 HOH A O 1 HETATM 207 O O . HOH B 2 . ? 7.307 30.376 28.851 1.00 59.50 ? 15 HOH A O 1 HETATM 208 O O . HOH B 2 . ? 7.331 33.467 20.388 1.00 62.55 ? 16 HOH A O 1 HETATM 209 O O . HOH B 2 . ? 4.823 20.646 17.356 1.00 66.54 ? 17 HOH A O 1 HETATM 210 O O . HOH B 2 . ? 1.636 35.736 33.952 1.00 66.76 ? 18 HOH A O 1 HETATM 211 O O . HOH B 2 . ? -12.746 19.987 15.413 1.00 67.77 ? 19 HOH A O 1 HETATM 212 O O . HOH B 2 . ? -1.968 22.482 17.282 1.00 70.27 ? 20 HOH A O 1 HETATM 213 O O . HOH B 2 . ? 10.832 30.990 35.370 1.00 71.66 ? 21 HOH A O 1 HETATM 214 O O . HOH B 2 . ? 0.360 43.065 21.650 1.00 76.69 ? 22 HOH A O 1 HETATM 215 O O . HOH B 2 . ? -10.975 22.113 16.399 1.00 76.75 ? 23 HOH A O 1 HETATM 216 O O . HOH B 2 . ? 2.074 24.256 15.114 1.00 76.83 ? 24 HOH A O 1 HETATM 217 O O . HOH B 2 . ? -10.957 26.449 11.893 1.00 76.84 ? 25 HOH A O 1 HETATM 218 O O . HOH B 2 . ? 3.319 32.538 39.645 1.00 78.85 ? 26 HOH A O 1 HETATM 219 O O . HOH B 2 . ? 8.444 28.098 26.577 1.00 81.53 ? 27 HOH A O 1 HETATM 220 O O . HOH B 2 . ? -0.508 34.517 32.360 1.00 81.79 ? 28 HOH A O 1 HETATM 221 O O . HOH B 2 . ? -7.565 25.128 15.400 1.00 83.20 ? 29 HOH A O 1 HETATM 222 O O . HOH B 2 . ? -1.439 41.330 18.804 1.00 84.74 ? 30 HOH A O 1 HETATM 223 O O . HOH B 2 . ? 1.645 27.050 8.395 1.00 85.48 ? 31 HOH A O 1 HETATM 224 O O . HOH B 2 . ? 7.534 33.264 29.358 1.00 88.70 ? 32 HOH A O 1 HETATM 225 O O . HOH B 2 . ? 7.648 30.368 34.066 1.00 90.77 ? 33 HOH A O 1 HETATM 226 O O . HOH B 2 . ? 6.370 26.249 39.553 1.00 91.25 ? 34 HOH A O 1 HETATM 227 O O . HOH B 2 . ? 2.021 23.396 17.814 1.00 94.18 ? 35 HOH A O 1 HETATM 228 O O . HOH B 2 . ? -3.087 28.195 16.619 1.00 95.48 ? 36 HOH A O 1 HETATM 229 O O . HOH B 2 . ? 6.824 30.628 18.253 1.00 97.46 ? 37 HOH A O 1 HETATM 230 O O . HOH B 2 . ? 7.530 32.092 32.031 1.00 100.53 ? 38 HOH A O 1 HETATM 231 O O . HOH B 2 . ? -4.837 18.097 10.346 1.00 102.80 ? 39 HOH A O 1 HETATM 232 O O . HOH B 2 . ? -3.484 17.329 20.402 1.00 103.83 ? 40 HOH A O 1 HETATM 233 O O . HOH B 2 . ? 7.332 36.857 31.425 1.00 109.19 ? 41 HOH A O 1 HETATM 234 O O . HOH B 2 . ? 15.683 38.356 16.245 1.00 102.98 ? 42 HOH A O 1 HETATM 235 O O . HOH B 2 . ? 8.914 40.460 24.494 1.00 103.43 ? 43 HOH A O 1 HETATM 236 O O . HOH B 2 . ? 4.488 27.354 15.926 1.00 103.45 ? 44 HOH A O 1 HETATM 237 O O . HOH B 2 . ? 4.207 29.846 20.075 1.00 106.30 ? 45 HOH A O 1 HETATM 238 O O . HOH B 2 . ? 6.897 29.326 9.768 1.00 107.28 ? 46 HOH A O 1 HETATM 239 O O . HOH B 2 . ? 10.694 35.593 19.667 1.00 107.72 ? 47 HOH A O 1 HETATM 240 O O . HOH B 2 . ? 0.953 28.474 38.063 1.00 108.87 ? 48 HOH A O 1 HETATM 241 O O . HOH B 2 . ? -12.989 24.733 16.154 1.00 112.37 ? 49 HOH A O 1 HETATM 242 O O . HOH B 2 . ? 14.134 39.913 18.566 1.00 113.43 ? 50 HOH A O 1 HETATM 243 O O . HOH B 2 . ? 8.772 29.352 30.911 1.00 116.37 ? 51 HOH A O 1 #