data_2DQQ # _entry.id 2DQQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DQQ pdb_00002dqq 10.2210/pdb2dqq/pdb NDB AH0024 ? ? RCSB RCSB025731 ? ? WWPDB D_1000025731 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 479D ;Same hybrid duplex sequence but without the 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine ; unspecified PDB 2DQO . unspecified PDB 2DQP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DQQ _pdbx_database_status.recvd_initial_deposition_date 2006-05-29 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Juan, E.C.M.' 1 'Kondo, J.' 2 'Ito, T.' 3 'Ueno, Y.' 4 'Matsuda, A.' 5 'Takenaka, A.' 6 # _citation.id primary _citation.title ;Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 35 _citation.page_first 1969 _citation.page_last 1977 _citation.year 2007 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17341465 _citation.pdbx_database_id_DOI 10.1093/nar/gkl821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Juan, E.C.M.' 1 ? primary 'Kondo, J.' 2 ? primary 'Kurihara, T.' 3 ? primary 'Ito, T.' 4 ? primary 'Ueno, Y.' 5 ? primary 'Matsuda, A.' 6 ? primary 'Takenaka, A.' 7 ? # _cell.entry_id 2DQQ _cell.length_a 52.471 _cell.length_b 52.471 _cell.length_c 42.488 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DQQ _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DCP*(OMU)P*DCP*DTP*(OMU)P*DCP*DTP*DTP*DC)-3') ; 2664.734 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3') ; 2981.895 1 ? ? ? ? 3 non-polymer syn '(6-AMINOHEXYL)CARBAMIC ACID' 160.214 2 ? ? ? ? 4 water nat water 18.015 62 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(OMU)(DC)(DT)(OMU)(DC)(DT)(DT)(DC)' CUCTUCTTC A ? 2 polyribonucleotide no no GAAGAAGAG GAAGAAGAG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 OMU n 1 3 DC n 1 4 DT n 1 5 OMU n 1 6 DC n 1 7 DT n 1 8 DT n 1 9 DC n 2 1 G n 2 2 A n 2 3 A n 2 4 G n 2 5 A n 2 6 A n 2 7 G n 2 8 A n 2 9 G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'synthetic construct' ? 32630 ? 2 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2DQQ 1 'C(OMU)CT(OMU)CTTC' 1 2DQQ ? 2 PDB 2DQQ 2 GAAGAAGAG 10 2DQQ ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DQQ A 1 ? 9 ? 2DQQ 1 ? 9 ? 1 9 2 2 2DQQ B 1 ? 9 ? 2DQQ 10 ? 18 ? 10 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 CMY non-polymer . '(6-AMINOHEXYL)CARBAMIC ACID' ? 'C7 H16 N2 O2' 160.214 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 OMU 'RNA linking' n ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 # _exptl.entry_id 2DQQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;25mM sodium cacodylate, pH 7.0, 5mM spermine tetrahydrochloride, 25mM lithium chloride and 7.5% MPD, equilibrated against 35% (v/v) MPD, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'sodium cacodylate' ? ? ? 1 2 1 'spermine tetrahydrochloride' ? ? ? 1 3 1 'lithium chloride' ? ? ? 1 4 1 MPD ? ? ? 1 5 1 HOH ? ? ? 1 6 2 'sodium cacodylate' ? ? ? 1 7 2 'lithium chloride' ? ? ? 1 8 2 MPD ? ? ? 1 9 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-12-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-18B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 2DQQ _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 42.488 _reflns.number_all ? _reflns.number_obs 4587 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.11 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.296 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2DQQ _refine.ls_d_res_high 2.0 _refine.ls_d_res_low 10 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 4538 _refine.ls_number_reflns_obs 4494 _refine.ls_number_reflns_R_free 469 _refine.ls_percent_reflns_obs 99.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.2463 _refine.ls_R_factor_R_free 0.2844 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 479D' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Maximum Likelihood' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 3.241 _refine.aniso_B[1][2] -6.598 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 3.241 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -6.482 _refine.details ;The value of the item "Number reflections (observed) is the number of reflections used in refinement. This value excludes the reflections that have sigma(F) less than 3.0. ; _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 374 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 456 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 10 # _struct.entry_id 2DQQ _struct.title ;Crystal Structure of d(CXCTXCTTC):r(gaagaagag) Where X is 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DQQ _struct_keywords.pdbx_keywords 'DNA-RNA HYBRID' _struct_keywords.text ;modified nucleotide, 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine, A-form RNA:DNA hybrid duplex, DNA-RNA HYBRID ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 1 "O3'" ? ? ? 1_555 A OMU 2 P ? ? A DC 1 A OMU 2 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale2 covale both ? A OMU 2 "O3'" ? ? ? 1_555 A DC 3 P ? ? A OMU 2 A DC 3 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale3 covale none ? A OMU 2 C5 ? ? ? 1_555 C CMY . C1Y ? ? A OMU 2 A CMY 102 1_555 ? ? ? ? ? ? ? 1.542 ? ? covale4 covale both ? A DT 4 "O3'" ? ? ? 1_555 A OMU 5 P ? ? A DT 4 A OMU 5 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale5 covale both ? A OMU 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? A OMU 5 A DC 6 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale6 covale none ? A OMU 5 C5 ? ? ? 1_555 D CMY . C1Y ? ? A OMU 5 A CMY 105 1_555 ? ? ? ? ? ? ? 1.530 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B G 9 N1 ? ? A DC 1 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B G 9 O6 ? ? A DC 1 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B G 9 N2 ? ? A DC 1 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A OMU 2 N3 ? ? ? 1_555 B A 8 N1 ? ? A OMU 2 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A OMU 2 O4 ? ? ? 1_555 B A 8 N6 ? ? A OMU 2 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B G 7 N1 ? ? A DC 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B G 7 O6 ? ? A DC 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B G 7 N2 ? ? A DC 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B A 6 N1 ? ? A DT 4 B A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B A 6 N6 ? ? A DT 4 B A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A OMU 5 N3 ? ? ? 1_555 B A 5 N1 ? ? A OMU 5 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A OMU 5 O4 ? ? ? 1_555 B A 5 N6 ? ? A OMU 5 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B G 4 N1 ? ? A DC 6 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B G 4 O6 ? ? A DC 6 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B G 4 N2 ? ? A DC 6 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B A 3 N1 ? ? A DT 7 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B A 3 N6 ? ? A DT 7 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B A 2 N1 ? ? A DT 8 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B A 2 N6 ? ? A DT 8 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B A 3 N1 ? ? A DT 8 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B A 3 N6 ? ? A DT 8 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B G 1 N1 ? ? A DC 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B G 1 O6 ? ? A DC 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B G 1 N2 ? ? A DC 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CMY 102 ? 4 'BINDING SITE FOR RESIDUE CMY A 102' AC2 Software A CMY 105 ? 3 'BINDING SITE FOR RESIDUE CMY A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DC A 1 ? DC A 1 . ? 1_555 ? 2 AC1 4 OMU A 2 ? OMU A 2 . ? 1_555 ? 3 AC1 4 A B 8 ? A B 17 . ? 1_555 ? 4 AC1 4 G B 9 ? G B 18 . ? 1_555 ? 5 AC2 3 DT A 4 ? DT A 4 . ? 1_555 ? 6 AC2 3 OMU A 5 ? OMU A 5 . ? 1_555 ? 7 AC2 3 HOH E . ? HOH A 116 . ? 1_555 ? # _database_PDB_matrix.entry_id 2DQQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DQQ _atom_sites.fract_transf_matrix[1][1] 0.019058 _atom_sites.fract_transf_matrix[1][2] 0.011003 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022006 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023536 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 20.150 20.586 12.780 1.00 45.77 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 19.472 20.471 14.037 1.00 44.43 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 17.972 20.404 13.866 1.00 41.90 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 17.438 21.746 13.710 1.00 40.80 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 17.535 19.618 12.624 1.00 41.73 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 16.445 18.737 12.876 1.00 40.04 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 17.048 20.690 11.679 1.00 42.15 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 16.529 21.752 12.621 1.00 41.43 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 16.534 23.082 11.981 1.00 38.51 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 15.344 23.817 11.942 1.00 36.86 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 14.365 23.413 12.583 1.00 35.24 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 15.296 24.955 11.212 1.00 35.38 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 16.383 25.383 10.571 1.00 36.51 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 16.271 26.479 9.815 1.00 36.04 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 17.630 24.700 10.662 1.00 36.75 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 17.661 23.565 11.375 1.00 37.49 ? 1 DC A C6 1 HETATM 17 N N1 . OMU A 1 2 ? 12.128 21.879 9.917 1.00 29.38 ? 2 OMU A N1 1 HETATM 18 C C2 . OMU A 1 2 ? 11.365 22.716 9.141 1.00 27.63 ? 2 OMU A C2 1 HETATM 19 N N3 . OMU A 1 2 ? 12.068 23.424 8.193 1.00 24.86 ? 2 OMU A N3 1 HETATM 20 C C4 . OMU A 1 2 ? 13.430 23.366 7.944 1.00 26.87 ? 2 OMU A C4 1 HETATM 21 C C5 . OMU A 1 2 ? 14.175 22.419 8.759 1.00 28.19 ? 2 OMU A C5 1 HETATM 22 C C6 . OMU A 1 2 ? 13.486 21.754 9.710 1.00 29.17 ? 2 OMU A C6 1 HETATM 23 O O2 . OMU A 1 2 ? 10.154 22.825 9.280 1.00 27.25 ? 2 OMU A O2 1 HETATM 24 O O4 . OMU A 1 2 ? 13.926 24.106 7.102 1.00 21.28 ? 2 OMU A O4 1 HETATM 25 C "C1'" . OMU A 1 2 ? 11.416 21.131 10.984 1.00 31.79 ? 2 OMU A "C1'" 1 HETATM 26 C "C2'" . OMU A 1 2 ? 10.598 19.937 10.479 1.00 31.91 ? 2 OMU A "C2'" 1 HETATM 27 O "O2'" . OMU A 1 2 ? 9.420 19.794 11.257 1.00 32.90 ? 2 OMU A "O2'" 1 HETATM 28 C CM2 . OMU A 1 2 ? 8.383 20.767 11.060 1.00 31.83 ? 2 OMU A CM2 1 HETATM 29 C "C3'" . OMU A 1 2 ? 11.582 18.796 10.723 1.00 33.03 ? 2 OMU A "C3'" 1 HETATM 30 C "C4'" . OMU A 1 2 ? 12.144 19.195 12.074 1.00 33.81 ? 2 OMU A "C4'" 1 HETATM 31 O "O3'" . OMU A 1 2 ? 10.967 17.511 10.782 1.00 33.98 ? 2 OMU A "O3'" 1 HETATM 32 O "O4'" . OMU A 1 2 ? 12.357 20.623 11.919 1.00 34.10 ? 2 OMU A "O4'" 1 HETATM 33 C "C5'" . OMU A 1 2 ? 13.420 18.516 12.500 1.00 34.29 ? 2 OMU A "C5'" 1 HETATM 34 O "O5'" . OMU A 1 2 ? 14.377 18.563 11.459 1.00 36.51 ? 2 OMU A "O5'" 1 HETATM 35 P P . OMU A 1 2 ? 15.810 17.899 11.658 1.00 39.21 ? 2 OMU A P 1 HETATM 36 O OP1 . OMU A 1 2 ? 15.604 16.510 12.140 1.00 38.92 ? 2 OMU A OP1 1 HETATM 37 O OP2 . OMU A 1 2 ? 16.599 18.136 10.423 1.00 38.62 ? 2 OMU A OP2 1 ATOM 38 P P . DC A 1 3 ? 10.897 16.602 9.457 1.00 34.07 ? 3 DC A P 1 ATOM 39 O OP1 . DC A 1 3 ? 10.452 15.242 9.853 1.00 32.71 ? 3 DC A OP1 1 ATOM 40 O OP2 . DC A 1 3 ? 12.149 16.764 8.675 1.00 33.60 ? 3 DC A OP2 1 ATOM 41 O "O5'" . DC A 1 3 ? 9.700 17.259 8.644 1.00 34.02 ? 3 DC A "O5'" 1 ATOM 42 C "C5'" . DC A 1 3 ? 8.430 17.437 9.266 1.00 34.77 ? 3 DC A "C5'" 1 ATOM 43 C "C4'" . DC A 1 3 ? 7.422 17.926 8.256 1.00 33.44 ? 3 DC A "C4'" 1 ATOM 44 O "O4'" . DC A 1 3 ? 7.714 19.317 7.965 1.00 35.18 ? 3 DC A "O4'" 1 ATOM 45 C "C3'" . DC A 1 3 ? 7.535 17.164 6.939 1.00 34.62 ? 3 DC A "C3'" 1 ATOM 46 O "O3'" . DC A 1 3 ? 6.319 16.625 6.447 1.00 32.63 ? 3 DC A "O3'" 1 ATOM 47 C "C2'" . DC A 1 3 ? 8.065 18.172 5.943 1.00 34.81 ? 3 DC A "C2'" 1 ATOM 48 C "C1'" . DC A 1 3 ? 7.822 19.531 6.567 1.00 34.29 ? 3 DC A "C1'" 1 ATOM 49 N N1 . DC A 1 3 ? 9.018 20.343 6.315 1.00 33.42 ? 3 DC A N1 1 ATOM 50 C C2 . DC A 1 3 ? 8.930 21.415 5.432 1.00 32.74 ? 3 DC A C2 1 ATOM 51 O O2 . DC A 1 3 ? 7.812 21.763 5.022 1.00 32.64 ? 3 DC A O2 1 ATOM 52 N N3 . DC A 1 3 ? 10.065 22.048 5.050 1.00 32.35 ? 3 DC A N3 1 ATOM 53 C C4 . DC A 1 3 ? 11.246 21.662 5.546 1.00 31.97 ? 3 DC A C4 1 ATOM 54 N N4 . DC A 1 3 ? 12.346 22.269 5.088 1.00 30.29 ? 3 DC A N4 1 ATOM 55 C C5 . DC A 1 3 ? 11.351 20.627 6.518 1.00 31.41 ? 3 DC A C5 1 ATOM 56 C C6 . DC A 1 3 ? 10.220 20.004 6.878 1.00 32.48 ? 3 DC A C6 1 ATOM 57 P P . DT A 1 4 ? 6.368 15.724 5.122 1.00 31.79 ? 4 DT A P 1 ATOM 58 O OP1 . DT A 1 4 ? 5.318 14.683 5.195 1.00 30.73 ? 4 DT A OP1 1 ATOM 59 O OP2 . DT A 1 4 ? 7.784 15.338 4.908 1.00 31.49 ? 4 DT A OP2 1 ATOM 60 O "O5'" . DT A 1 4 ? 5.994 16.746 3.967 1.00 32.77 ? 4 DT A "O5'" 1 ATOM 61 C "C5'" . DT A 1 4 ? 4.842 17.568 4.065 1.00 31.71 ? 4 DT A "C5'" 1 ATOM 62 C "C4'" . DT A 1 4 ? 4.679 18.336 2.781 1.00 33.35 ? 4 DT A "C4'" 1 ATOM 63 O "O4'" . DT A 1 4 ? 5.643 19.423 2.777 1.00 32.32 ? 4 DT A "O4'" 1 ATOM 64 C "C3'" . DT A 1 4 ? 5.051 17.423 1.617 1.00 32.88 ? 4 DT A "C3'" 1 ATOM 65 O "O3'" . DT A 1 4 ? 4.111 17.323 0.572 1.00 33.40 ? 4 DT A "O3'" 1 ATOM 66 C "C2'" . DT A 1 4 ? 6.319 18.006 1.046 1.00 33.96 ? 4 DT A "C2'" 1 ATOM 67 C "C1'" . DT A 1 4 ? 6.368 19.425 1.557 1.00 32.64 ? 4 DT A "C1'" 1 ATOM 68 N N1 . DT A 1 4 ? 7.779 19.726 1.840 1.00 29.36 ? 4 DT A N1 1 ATOM 69 C C2 . DT A 1 4 ? 8.388 20.767 1.177 1.00 30.16 ? 4 DT A C2 1 ATOM 70 O O2 . DT A 1 4 ? 7.786 21.540 0.447 1.00 27.19 ? 4 DT A O2 1 ATOM 71 N N3 . DT A 1 4 ? 9.741 20.865 1.398 1.00 26.56 ? 4 DT A N3 1 ATOM 72 C C4 . DT A 1 4 ? 10.521 20.047 2.207 1.00 27.31 ? 4 DT A C4 1 ATOM 73 O O4 . DT A 1 4 ? 11.737 20.222 2.273 1.00 21.95 ? 4 DT A O4 1 ATOM 74 C C5 . DT A 1 4 ? 9.804 19.016 2.911 1.00 28.62 ? 4 DT A C5 1 ATOM 75 C C7 . DT A 1 4 ? 10.560 18.102 3.822 1.00 29.28 ? 4 DT A C7 1 ATOM 76 C C6 . DT A 1 4 ? 8.484 18.917 2.708 1.00 30.70 ? 4 DT A C6 1 HETATM 77 N N1 . OMU A 1 5 ? 8.647 19.392 -2.405 1.00 27.56 ? 5 OMU A N1 1 HETATM 78 C C2 . OMU A 1 5 ? 9.842 19.993 -2.699 1.00 28.00 ? 5 OMU A C2 1 HETATM 79 N N3 . OMU A 1 5 ? 10.911 19.516 -2.000 1.00 26.00 ? 5 OMU A N3 1 HETATM 80 C C4 . OMU A 1 5 ? 10.912 18.507 -1.066 1.00 28.54 ? 5 OMU A C4 1 HETATM 81 C C5 . OMU A 1 5 ? 9.626 17.886 -0.811 1.00 29.11 ? 5 OMU A C5 1 HETATM 82 C C6 . OMU A 1 5 ? 8.565 18.379 -1.476 1.00 27.90 ? 5 OMU A C6 1 HETATM 83 O O2 . OMU A 1 5 ? 9.948 20.877 -3.525 1.00 26.49 ? 5 OMU A O2 1 HETATM 84 O O4 . OMU A 1 5 ? 11.962 18.198 -0.509 1.00 28.43 ? 5 OMU A O4 1 HETATM 85 C "C1'" . OMU A 1 5 ? 7.474 19.872 -3.159 1.00 29.88 ? 5 OMU A "C1'" 1 HETATM 86 C "C2'" . OMU A 1 5 ? 7.355 19.136 -4.497 1.00 31.11 ? 5 OMU A "C2'" 1 HETATM 87 O "O2'" . OMU A 1 5 ? 6.827 20.003 -5.485 1.00 32.47 ? 5 OMU A "O2'" 1 HETATM 88 C CM2 . OMU A 1 5 ? 7.753 20.898 -6.118 1.00 31.10 ? 5 OMU A CM2 1 HETATM 89 C "C3'" . OMU A 1 5 ? 6.386 18.024 -4.117 1.00 32.11 ? 5 OMU A "C3'" 1 HETATM 90 C "C4'" . OMU A 1 5 ? 5.403 18.805 -3.270 1.00 32.15 ? 5 OMU A "C4'" 1 HETATM 91 O "O3'" . OMU A 1 5 ? 5.753 17.416 -5.232 1.00 31.48 ? 5 OMU A "O3'" 1 HETATM 92 O "O4'" . OMU A 1 5 ? 6.291 19.585 -2.428 1.00 30.58 ? 5 OMU A "O4'" 1 HETATM 93 C "C5'" . OMU A 1 5 ? 4.442 18.013 -2.431 1.00 32.22 ? 5 OMU A "C5'" 1 HETATM 94 O "O5'" . OMU A 1 5 ? 5.128 17.023 -1.690 1.00 31.67 ? 5 OMU A "O5'" 1 HETATM 95 P P . OMU A 1 5 ? 4.361 16.219 -0.559 1.00 33.70 ? 5 OMU A P 1 HETATM 96 O OP1 . OMU A 1 5 ? 3.040 15.786 -1.081 1.00 35.16 ? 5 OMU A OP1 1 HETATM 97 O OP2 . OMU A 1 5 ? 5.296 15.214 0.012 1.00 34.21 ? 5 OMU A OP2 1 ATOM 98 P P . DC A 1 6 ? 6.386 16.086 -5.881 1.00 33.34 ? 6 DC A P 1 ATOM 99 O OP1 . DC A 1 6 ? 5.438 15.646 -6.943 1.00 31.10 ? 6 DC A OP1 1 ATOM 100 O OP2 . DC A 1 6 ? 6.808 15.125 -4.843 1.00 31.27 ? 6 DC A OP2 1 ATOM 101 O "O5'" . DC A 1 6 ? 7.683 16.654 -6.600 1.00 28.99 ? 6 DC A "O5'" 1 ATOM 102 C "C5'" . DC A 1 6 ? 7.560 17.709 -7.546 1.00 29.35 ? 6 DC A "C5'" 1 ATOM 103 C "C4'" . DC A 1 6 ? 8.822 17.812 -8.360 1.00 31.01 ? 6 DC A "C4'" 1 ATOM 104 O "O4'" . DC A 1 6 ? 9.796 18.554 -7.584 1.00 31.70 ? 6 DC A "O4'" 1 ATOM 105 C "C3'" . DC A 1 6 ? 9.412 16.426 -8.578 1.00 30.32 ? 6 DC A "C3'" 1 ATOM 106 O "O3'" . DC A 1 6 ? 9.475 15.967 -9.906 1.00 30.38 ? 6 DC A "O3'" 1 ATOM 107 C "C2'" . DC A 1 6 ? 10.821 16.486 -8.037 1.00 31.11 ? 6 DC A "C2'" 1 ATOM 108 C "C1'" . DC A 1 6 ? 11.066 17.921 -7.635 1.00 31.08 ? 6 DC A "C1'" 1 ATOM 109 N N1 . DC A 1 6 ? 11.600 17.828 -6.275 1.00 27.87 ? 6 DC A N1 1 ATOM 110 C C2 . DC A 1 6 ? 12.926 18.173 -6.047 1.00 23.76 ? 6 DC A C2 1 ATOM 111 O O2 . DC A 1 6 ? 13.562 18.728 -6.948 1.00 26.06 ? 6 DC A O2 1 ATOM 112 N N3 . DC A 1 6 ? 13.483 17.891 -4.854 1.00 24.71 ? 6 DC A N3 1 ATOM 113 C C4 . DC A 1 6 ? 12.758 17.303 -3.902 1.00 22.80 ? 6 DC A C4 1 ATOM 114 N N4 . DC A 1 6 ? 13.374 16.958 -2.779 1.00 21.13 ? 6 DC A N4 1 ATOM 115 C C5 . DC A 1 6 ? 11.370 17.026 -4.075 1.00 25.58 ? 6 DC A C5 1 ATOM 116 C C6 . DC A 1 6 ? 10.833 17.316 -5.265 1.00 25.39 ? 6 DC A C6 1 ATOM 117 P P . DT A 1 7 ? 9.899 14.442 -10.140 1.00 32.15 ? 7 DT A P 1 ATOM 118 O OP1 . DT A 1 7 ? 9.242 13.924 -11.367 1.00 28.54 ? 7 DT A OP1 1 ATOM 119 O OP2 . DT A 1 7 ? 9.695 13.744 -8.844 1.00 27.44 ? 7 DT A OP2 1 ATOM 120 O "O5'" . DT A 1 7 ? 11.465 14.556 -10.365 1.00 27.73 ? 7 DT A "O5'" 1 ATOM 121 C "C5'" . DT A 1 7 ? 11.983 15.389 -11.386 1.00 27.46 ? 7 DT A "C5'" 1 ATOM 122 C "C4'" . DT A 1 7 ? 13.483 15.259 -11.435 1.00 30.21 ? 7 DT A "C4'" 1 ATOM 123 O "O4'" . DT A 1 7 ? 14.032 15.940 -10.274 1.00 29.69 ? 7 DT A "O4'" 1 ATOM 124 C "C3'" . DT A 1 7 ? 13.917 13.798 -11.327 1.00 30.21 ? 7 DT A "C3'" 1 ATOM 125 O "O3'" . DT A 1 7 ? 14.613 13.288 -12.442 1.00 32.00 ? 7 DT A "O3'" 1 ATOM 126 C "C2'" . DT A 1 7 ? 14.847 13.740 -10.138 1.00 31.20 ? 7 DT A "C2'" 1 ATOM 127 C "C1'" . DT A 1 7 ? 15.090 15.173 -9.715 1.00 30.70 ? 7 DT A "C1'" 1 ATOM 128 N N1 . DT A 1 7 ? 14.952 15.162 -8.250 1.00 28.25 ? 7 DT A N1 1 ATOM 129 C C2 . DT A 1 7 ? 16.062 15.414 -7.482 1.00 28.51 ? 7 DT A C2 1 ATOM 130 O O2 . DT A 1 7 ? 17.121 15.807 -7.950 1.00 25.89 ? 7 DT A O2 1 ATOM 131 N N3 . DT A 1 7 ? 15.888 15.183 -6.141 1.00 28.30 ? 7 DT A N3 1 ATOM 132 C C4 . DT A 1 7 ? 14.735 14.749 -5.510 1.00 29.42 ? 7 DT A C4 1 ATOM 133 O O4 . DT A 1 7 ? 14.743 14.527 -4.305 1.00 30.97 ? 7 DT A O4 1 ATOM 134 C C5 . DT A 1 7 ? 13.591 14.579 -6.369 1.00 30.06 ? 7 DT A C5 1 ATOM 135 C C7 . DT A 1 7 ? 12.291 14.142 -5.773 1.00 31.86 ? 7 DT A C7 1 ATOM 136 C C6 . DT A 1 7 ? 13.749 14.811 -7.678 1.00 28.62 ? 7 DT A C6 1 ATOM 137 P P . DT A 1 8 ? 14.934 11.715 -12.485 1.00 31.27 ? 8 DT A P 1 ATOM 138 O OP1 . DT A 1 8 ? 14.829 11.263 -13.890 1.00 32.15 ? 8 DT A OP1 1 ATOM 139 O OP2 . DT A 1 8 ? 14.107 11.061 -11.443 1.00 30.77 ? 8 DT A OP2 1 ATOM 140 O "O5'" . DT A 1 8 ? 16.442 11.645 -11.985 1.00 28.01 ? 8 DT A "O5'" 1 ATOM 141 C "C5'" . DT A 1 8 ? 17.387 12.648 -12.342 1.00 28.20 ? 8 DT A "C5'" 1 ATOM 142 C "C4'" . DT A 1 8 ? 18.743 12.284 -11.788 1.00 29.46 ? 8 DT A "C4'" 1 ATOM 143 O "O4'" . DT A 1 8 ? 18.898 12.866 -10.463 1.00 30.94 ? 8 DT A "O4'" 1 ATOM 144 C "C3'" . DT A 1 8 ? 18.860 10.768 -11.620 1.00 31.14 ? 8 DT A "C3'" 1 ATOM 145 O "O3'" . DT A 1 8 ? 19.946 10.141 -12.286 1.00 32.53 ? 8 DT A "O3'" 1 ATOM 146 C "C2'" . DT A 1 8 ? 19.001 10.540 -10.133 1.00 30.30 ? 8 DT A "C2'" 1 ATOM 147 C "C1'" . DT A 1 8 ? 19.390 11.888 -9.553 1.00 32.25 ? 8 DT A "C1'" 1 ATOM 148 N N1 . DT A 1 8 ? 18.671 12.021 -8.275 1.00 29.05 ? 8 DT A N1 1 ATOM 149 C C2 . DT A 1 8 ? 19.374 12.239 -7.108 1.00 28.95 ? 8 DT A C2 1 ATOM 150 O O2 . DT A 1 8 ? 20.572 12.478 -7.071 1.00 28.45 ? 8 DT A O2 1 ATOM 151 N N3 . DT A 1 8 ? 18.615 12.164 -5.972 1.00 30.88 ? 8 DT A N3 1 ATOM 152 C C4 . DT A 1 8 ? 17.255 11.917 -5.885 1.00 31.27 ? 8 DT A C4 1 ATOM 153 O O4 . DT A 1 8 ? 16.720 11.824 -4.785 1.00 32.66 ? 8 DT A O4 1 ATOM 154 C C5 . DT A 1 8 ? 16.574 11.774 -7.147 1.00 30.56 ? 8 DT A C5 1 ATOM 155 C C7 . DT A 1 8 ? 15.096 11.547 -7.156 1.00 30.24 ? 8 DT A C7 1 ATOM 156 C C6 . DT A 1 8 ? 17.304 11.846 -8.265 1.00 29.15 ? 8 DT A C6 1 ATOM 157 P P . DC A 1 9 ? 19.967 8.537 -12.352 1.00 32.66 ? 9 DC A P 1 ATOM 158 O OP1 . DC A 1 9 ? 20.547 8.120 -13.656 1.00 35.37 ? 9 DC A OP1 1 ATOM 159 O OP2 . DC A 1 9 ? 18.610 8.077 -11.978 1.00 31.63 ? 9 DC A OP2 1 ATOM 160 O "O5'" . DC A 1 9 ? 20.952 8.132 -11.167 1.00 33.11 ? 9 DC A "O5'" 1 ATOM 161 C "C5'" . DC A 1 9 ? 22.254 8.696 -11.079 1.00 32.64 ? 9 DC A "C5'" 1 ATOM 162 C "C4'" . DC A 1 9 ? 22.914 8.301 -9.778 1.00 32.26 ? 9 DC A "C4'" 1 ATOM 163 O "O4'" . DC A 1 9 ? 22.202 8.906 -8.673 1.00 32.23 ? 9 DC A "O4'" 1 ATOM 164 C "C3'" . DC A 1 9 ? 22.964 6.794 -9.503 1.00 33.11 ? 9 DC A "C3'" 1 ATOM 165 O "O3'" . DC A 1 9 ? 24.289 6.262 -9.447 1.00 36.35 ? 9 DC A "O3'" 1 ATOM 166 C "C2'" . DC A 1 9 ? 22.155 6.600 -8.234 1.00 33.30 ? 9 DC A "C2'" 1 ATOM 167 C "C1'" . DC A 1 9 ? 22.081 7.986 -7.603 1.00 34.16 ? 9 DC A "C1'" 1 ATOM 168 N N1 . DC A 1 9 ? 20.773 8.208 -6.966 1.00 33.20 ? 9 DC A N1 1 ATOM 169 C C2 . DC A 1 9 ? 20.702 8.328 -5.572 1.00 33.06 ? 9 DC A C2 1 ATOM 170 O O2 . DC A 1 9 ? 21.756 8.349 -4.914 1.00 31.41 ? 9 DC A O2 1 ATOM 171 N N3 . DC A 1 9 ? 19.489 8.424 -4.982 1.00 32.22 ? 9 DC A N3 1 ATOM 172 C C4 . DC A 1 9 ? 18.380 8.425 -5.730 1.00 31.68 ? 9 DC A C4 1 ATOM 173 N N4 . DC A 1 9 ? 17.203 8.483 -5.110 1.00 30.84 ? 9 DC A N4 1 ATOM 174 C C5 . DC A 1 9 ? 18.431 8.358 -7.149 1.00 33.68 ? 9 DC A C5 1 ATOM 175 C C6 . DC A 1 9 ? 19.636 8.254 -7.720 1.00 32.97 ? 9 DC A C6 1 ATOM 176 O "O5'" . G B 2 1 ? 17.353 7.241 5.083 1.00 42.71 ? 10 G B "O5'" 1 ATOM 177 C "C5'" . G B 2 1 ? 18.442 6.620 5.787 1.00 41.46 ? 10 G B "C5'" 1 ATOM 178 C "C4'" . G B 2 1 ? 19.663 6.381 4.923 1.00 40.86 ? 10 G B "C4'" 1 ATOM 179 O "O4'" . G B 2 1 ? 19.324 5.492 3.823 1.00 39.50 ? 10 G B "O4'" 1 ATOM 180 C "C3'" . G B 2 1 ? 20.239 7.603 4.224 1.00 39.59 ? 10 G B "C3'" 1 ATOM 181 O "O3'" . G B 2 1 ? 21.076 8.353 5.092 1.00 41.88 ? 10 G B "O3'" 1 ATOM 182 C "C2'" . G B 2 1 ? 21.037 6.960 3.099 1.00 39.09 ? 10 G B "C2'" 1 ATOM 183 O "O2'" . G B 2 1 ? 22.256 6.399 3.552 1.00 37.01 ? 10 G B "O2'" 1 ATOM 184 C "C1'" . G B 2 1 ? 20.090 5.837 2.677 1.00 37.83 ? 10 G B "C1'" 1 ATOM 185 N N9 . G B 2 1 ? 19.174 6.255 1.621 1.00 35.83 ? 10 G B N9 1 ATOM 186 C C8 . G B 2 1 ? 17.798 6.262 1.662 1.00 35.95 ? 10 G B C8 1 ATOM 187 N N7 . G B 2 1 ? 17.255 6.683 0.549 1.00 34.48 ? 10 G B N7 1 ATOM 188 C C5 . G B 2 1 ? 18.338 6.971 -0.272 1.00 34.78 ? 10 G B C5 1 ATOM 189 C C6 . G B 2 1 ? 18.378 7.452 -1.604 1.00 34.25 ? 10 G B C6 1 ATOM 190 O O6 . G B 2 1 ? 17.435 7.721 -2.355 1.00 33.29 ? 10 G B O6 1 ATOM 191 N N1 . G B 2 1 ? 19.686 7.612 -2.050 1.00 32.98 ? 10 G B N1 1 ATOM 192 C C2 . G B 2 1 ? 20.811 7.344 -1.313 1.00 34.14 ? 10 G B C2 1 ATOM 193 N N2 . G B 2 1 ? 21.988 7.587 -1.912 1.00 31.21 ? 10 G B N2 1 ATOM 194 N N3 . G B 2 1 ? 20.788 6.879 -0.078 1.00 35.37 ? 10 G B N3 1 ATOM 195 C C4 . G B 2 1 ? 19.528 6.719 0.378 1.00 34.45 ? 10 G B C4 1 ATOM 196 P P . A B 2 2 ? 21.265 9.931 4.841 1.00 43.72 ? 11 A B P 1 ATOM 197 O OP1 . A B 2 2 ? 22.104 10.443 5.954 1.00 44.13 ? 11 A B OP1 1 ATOM 198 O OP2 . A B 2 2 ? 19.938 10.541 4.582 1.00 43.74 ? 11 A B OP2 1 ATOM 199 O "O5'" . A B 2 2 ? 22.107 10.012 3.490 1.00 42.43 ? 11 A B "O5'" 1 ATOM 200 C "C5'" . A B 2 2 ? 23.489 9.669 3.469 1.00 42.01 ? 11 A B "C5'" 1 ATOM 201 C "C4'" . A B 2 2 ? 24.124 10.167 2.194 1.00 42.11 ? 11 A B "C4'" 1 ATOM 202 O "O4'" . A B 2 2 ? 23.560 9.439 1.071 1.00 40.12 ? 11 A B "O4'" 1 ATOM 203 C "C3'" . A B 2 2 ? 23.850 11.627 1.863 1.00 42.25 ? 11 A B "C3'" 1 ATOM 204 O "O3'" . A B 2 2 ? 24.751 12.505 2.528 1.00 45.90 ? 11 A B "O3'" 1 ATOM 205 C "C2'" . A B 2 2 ? 24.047 11.647 0.356 1.00 42.04 ? 11 A B "C2'" 1 ATOM 206 O "O2'" . A B 2 2 ? 25.410 11.635 -0.019 1.00 41.43 ? 11 A B "O2'" 1 ATOM 207 C "C1'" . A B 2 2 ? 23.410 10.315 -0.036 1.00 40.42 ? 11 A B "C1'" 1 ATOM 208 N N9 . A B 2 2 ? 21.985 10.445 -0.333 1.00 38.59 ? 11 A B N9 1 ATOM 209 C C8 . A B 2 2 ? 20.915 10.197 0.488 1.00 37.49 ? 11 A B C8 1 ATOM 210 N N7 . A B 2 2 ? 19.752 10.386 -0.087 1.00 37.66 ? 11 A B N7 1 ATOM 211 C C5 . A B 2 2 ? 20.079 10.790 -1.373 1.00 38.07 ? 11 A B C5 1 ATOM 212 C C6 . A B 2 2 ? 19.290 11.136 -2.485 1.00 37.95 ? 11 A B C6 1 ATOM 213 N N6 . A B 2 2 ? 17.958 11.115 -2.480 1.00 36.00 ? 11 A B N6 1 ATOM 214 N N1 . A B 2 2 ? 19.928 11.503 -3.619 1.00 37.43 ? 11 A B N1 1 ATOM 215 C C2 . A B 2 2 ? 21.271 11.511 -3.624 1.00 38.53 ? 11 A B C2 1 ATOM 216 N N3 . A B 2 2 ? 22.122 11.197 -2.645 1.00 37.82 ? 11 A B N3 1 ATOM 217 C C4 . A B 2 2 ? 21.452 10.841 -1.535 1.00 38.51 ? 11 A B C4 1 ATOM 218 P P . A B 2 3 ? 24.268 13.992 2.927 1.00 47.98 ? 12 A B P 1 ATOM 219 O OP1 . A B 2 3 ? 25.438 14.634 3.582 1.00 48.34 ? 12 A B OP1 1 ATOM 220 O OP2 . A B 2 3 ? 22.968 13.921 3.643 1.00 47.84 ? 12 A B OP2 1 ATOM 221 O "O5'" . A B 2 3 ? 24.026 14.710 1.526 1.00 45.98 ? 12 A B "O5'" 1 ATOM 222 C "C5'" . A B 2 3 ? 25.117 14.917 0.645 1.00 44.58 ? 12 A B "C5'" 1 ATOM 223 C "C4'" . A B 2 3 ? 24.644 15.331 -0.730 1.00 41.96 ? 12 A B "C4'" 1 ATOM 224 O "O4'" . A B 2 3 ? 23.773 14.317 -1.303 1.00 42.12 ? 12 A B "O4'" 1 ATOM 225 C "C3'" . A B 2 3 ? 23.798 16.583 -0.867 1.00 40.62 ? 12 A B "C3'" 1 ATOM 226 O "O3'" . A B 2 3 ? 24.564 17.776 -0.729 1.00 39.35 ? 12 A B "O3'" 1 ATOM 227 C "C2'" . A B 2 3 ? 23.291 16.414 -2.294 1.00 39.13 ? 12 A B "C2'" 1 ATOM 228 O "O2'" . A B 2 3 ? 24.303 16.682 -3.242 1.00 37.47 ? 12 A B "O2'" 1 ATOM 229 C "C1'" . A B 2 3 ? 22.982 14.916 -2.324 1.00 38.55 ? 12 A B "C1'" 1 ATOM 230 N N9 . A B 2 3 ? 21.566 14.654 -2.061 1.00 35.51 ? 12 A B N9 1 ATOM 231 C C8 . A B 2 3 ? 20.955 14.292 -0.889 1.00 36.36 ? 12 A B C8 1 ATOM 232 N N7 . A B 2 3 ? 19.651 14.164 -0.991 1.00 35.22 ? 12 A B N7 1 ATOM 233 C C5 . A B 2 3 ? 19.391 14.459 -2.324 1.00 34.43 ? 12 A B C5 1 ATOM 234 C C6 . A B 2 3 ? 18.198 14.510 -3.072 1.00 32.63 ? 12 A B C6 1 ATOM 235 N N6 . A B 2 3 ? 16.987 14.260 -2.567 1.00 30.34 ? 12 A B N6 1 ATOM 236 N N1 . A B 2 3 ? 18.294 14.836 -4.378 1.00 32.47 ? 12 A B N1 1 ATOM 237 C C2 . A B 2 3 ? 19.498 15.095 -4.887 1.00 32.46 ? 12 A B C2 1 ATOM 238 N N3 . A B 2 3 ? 20.683 15.085 -4.292 1.00 33.69 ? 12 A B N3 1 ATOM 239 C C4 . A B 2 3 ? 20.561 14.755 -2.994 1.00 34.25 ? 12 A B C4 1 ATOM 240 P P . G B 2 4 ? 23.825 19.154 -0.346 1.00 40.08 ? 13 G B P 1 ATOM 241 O OP1 . G B 2 4 ? 24.883 20.126 0.033 1.00 41.05 ? 13 G B OP1 1 ATOM 242 O OP2 . G B 2 4 ? 22.717 18.873 0.605 1.00 35.68 ? 13 G B OP2 1 ATOM 243 O "O5'" . G B 2 4 ? 23.189 19.624 -1.725 1.00 35.48 ? 13 G B "O5'" 1 ATOM 244 C "C5'" . G B 2 4 ? 24.024 20.009 -2.810 1.00 34.96 ? 13 G B "C5'" 1 ATOM 245 C "C4'" . G B 2 4 ? 23.193 20.278 -4.034 1.00 33.42 ? 13 G B "C4'" 1 ATOM 246 O "O4'" . G B 2 4 ? 22.492 19.061 -4.401 1.00 33.10 ? 13 G B "O4'" 1 ATOM 247 C "C3'" . G B 2 4 ? 22.071 21.288 -3.849 1.00 33.61 ? 13 G B "C3'" 1 ATOM 248 O "O3'" . G B 2 4 ? 22.539 22.617 -3.969 1.00 32.67 ? 13 G B "O3'" 1 ATOM 249 C "C2'" . G B 2 4 ? 21.130 20.918 -4.984 1.00 31.96 ? 13 G B "C2'" 1 ATOM 250 O "O2'" . G B 2 4 ? 21.564 21.384 -6.244 1.00 35.32 ? 13 G B "O2'" 1 ATOM 251 C "C1'" . G B 2 4 ? 21.225 19.395 -4.948 1.00 32.05 ? 13 G B "C1'" 1 ATOM 252 N N9 . G B 2 4 ? 20.186 18.829 -4.099 1.00 29.41 ? 13 G B N9 1 ATOM 253 C C8 . G B 2 4 ? 20.303 18.375 -2.807 1.00 29.74 ? 13 G B C8 1 ATOM 254 N N7 . G B 2 4 ? 19.177 17.925 -2.320 1.00 30.08 ? 13 G B N7 1 ATOM 255 C C5 . G B 2 4 ? 18.265 18.092 -3.356 1.00 27.44 ? 13 G B C5 1 ATOM 256 C C6 . G B 2 4 ? 16.883 17.781 -3.430 1.00 27.32 ? 13 G B C6 1 ATOM 257 O O6 . G B 2 4 ? 16.159 17.274 -2.570 1.00 28.06 ? 13 G B O6 1 ATOM 258 N N1 . G B 2 4 ? 16.348 18.122 -4.667 1.00 27.84 ? 13 G B N1 1 ATOM 259 C C2 . G B 2 4 ? 17.047 18.693 -5.702 1.00 27.98 ? 13 G B C2 1 ATOM 260 N N2 . G B 2 4 ? 16.348 18.966 -6.814 1.00 30.98 ? 13 G B N2 1 ATOM 261 N N3 . G B 2 4 ? 18.334 18.979 -5.651 1.00 27.72 ? 13 G B N3 1 ATOM 262 C C4 . G B 2 4 ? 18.875 18.654 -4.456 1.00 29.29 ? 13 G B C4 1 ATOM 263 P P . A B 2 5 ? 21.740 23.802 -3.242 1.00 33.39 ? 14 A B P 1 ATOM 264 O OP1 . A B 2 5 ? 22.472 25.052 -3.586 1.00 33.09 ? 14 A B OP1 1 ATOM 265 O OP2 . A B 2 5 ? 21.514 23.443 -1.829 1.00 30.91 ? 14 A B OP2 1 ATOM 266 O "O5'" . A B 2 5 ? 20.329 23.829 -3.980 1.00 30.42 ? 14 A B "O5'" 1 ATOM 267 C "C5'" . A B 2 5 ? 20.236 24.248 -5.337 1.00 28.11 ? 14 A B "C5'" 1 ATOM 268 C "C4'" . A B 2 5 ? 18.801 24.198 -5.810 1.00 27.57 ? 14 A B "C4'" 1 ATOM 269 O "O4'" . A B 2 5 ? 18.324 22.827 -5.789 1.00 25.05 ? 14 A B "O4'" 1 ATOM 270 C "C3'" . A B 2 5 ? 17.780 24.923 -4.956 1.00 27.31 ? 14 A B "C3'" 1 ATOM 271 O "O3'" . A B 2 5 ? 17.806 26.322 -5.198 1.00 30.34 ? 14 A B "O3'" 1 ATOM 272 C "C2'" . A B 2 5 ? 16.490 24.275 -5.436 1.00 26.82 ? 14 A B "C2'" 1 ATOM 273 O "O2'" . A B 2 5 ? 16.125 24.727 -6.724 1.00 27.33 ? 14 A B "O2'" 1 ATOM 274 C "C1'" . A B 2 5 ? 16.927 22.812 -5.543 1.00 25.31 ? 14 A B "C1'" 1 ATOM 275 N N9 . A B 2 5 ? 16.676 22.075 -4.304 1.00 22.36 ? 14 A B N9 1 ATOM 276 C C8 . A B 2 5 ? 17.547 21.795 -3.279 1.00 19.69 ? 14 A B C8 1 ATOM 277 N N7 . A B 2 5 ? 16.997 21.144 -2.280 1.00 19.96 ? 14 A B N7 1 ATOM 278 C C5 . A B 2 5 ? 15.678 20.972 -2.680 1.00 21.74 ? 14 A B C5 1 ATOM 279 C C6 . A B 2 5 ? 14.575 20.359 -2.065 1.00 21.96 ? 14 A B C6 1 ATOM 280 N N6 . A B 2 5 ? 14.628 19.764 -0.871 1.00 21.67 ? 14 A B N6 1 ATOM 281 N N1 . A B 2 5 ? 13.397 20.374 -2.727 1.00 23.43 ? 14 A B N1 1 ATOM 282 C C2 . A B 2 5 ? 13.348 20.961 -3.930 1.00 23.34 ? 14 A B C2 1 ATOM 283 N N3 . A B 2 5 ? 14.317 21.564 -4.615 1.00 22.62 ? 14 A B N3 1 ATOM 284 C C4 . A B 2 5 ? 15.468 21.537 -3.926 1.00 21.99 ? 14 A B C4 1 ATOM 285 P P . A B 2 6 ? 17.416 27.338 -4.017 1.00 33.47 ? 15 A B P 1 ATOM 286 O OP1 . A B 2 6 ? 17.934 28.678 -4.397 1.00 34.98 ? 15 A B OP1 1 ATOM 287 O OP2 . A B 2 6 ? 17.806 26.745 -2.717 1.00 31.41 ? 15 A B OP2 1 ATOM 288 O "O5'" . A B 2 6 ? 15.827 27.386 -4.069 1.00 31.09 ? 15 A B "O5'" 1 ATOM 289 C "C5'" . A B 2 6 ? 15.159 27.888 -5.219 1.00 31.04 ? 15 A B "C5'" 1 ATOM 290 C "C4'" . A B 2 6 ? 13.713 27.447 -5.220 1.00 29.88 ? 15 A B "C4'" 1 ATOM 291 O "O4'" . A B 2 6 ? 13.661 25.991 -5.222 1.00 28.77 ? 15 A B "O4'" 1 ATOM 292 C "C3'" . A B 2 6 ? 12.896 27.817 -3.991 1.00 30.31 ? 15 A B "C3'" 1 ATOM 293 O "O3'" . A B 2 6 ? 12.406 29.148 -4.040 1.00 32.65 ? 15 A B "O3'" 1 ATOM 294 C "C2'" . A B 2 6 ? 11.762 26.814 -4.084 1.00 28.85 ? 15 A B "C2'" 1 ATOM 295 O "O2'" . A B 2 6 ? 10.855 27.144 -5.113 1.00 29.16 ? 15 A B "O2'" 1 ATOM 296 C "C1'" . A B 2 6 ? 12.534 25.557 -4.477 1.00 27.75 ? 15 A B "C1'" 1 ATOM 297 N N9 . A B 2 6 ? 13.006 24.858 -3.283 1.00 26.26 ? 15 A B N9 1 ATOM 298 C C8 . A B 2 6 ? 14.265 24.831 -2.726 1.00 26.53 ? 15 A B C8 1 ATOM 299 N N7 . A B 2 6 ? 14.342 24.102 -1.636 1.00 26.78 ? 15 A B N7 1 ATOM 300 C C5 . A B 2 6 ? 13.048 23.619 -1.465 1.00 24.83 ? 15 A B C5 1 ATOM 301 C C6 . A B 2 6 ? 12.467 22.781 -0.493 1.00 24.84 ? 15 A B C6 1 ATOM 302 N N6 . A B 2 6 ? 13.142 22.256 0.533 1.00 24.65 ? 15 A B N6 1 ATOM 303 N N1 . A B 2 6 ? 11.151 22.496 -0.614 1.00 26.82 ? 15 A B N1 1 ATOM 304 C C2 . A B 2 6 ? 10.472 23.021 -1.648 1.00 26.90 ? 15 A B C2 1 ATOM 305 N N3 . A B 2 6 ? 10.907 23.816 -2.625 1.00 24.22 ? 15 A B N3 1 ATOM 306 C C4 . A B 2 6 ? 12.217 24.079 -2.471 1.00 25.21 ? 15 A B C4 1 ATOM 307 P P . G B 2 7 ? 12.094 29.925 -2.667 1.00 34.35 ? 16 G B P 1 ATOM 308 O OP1 . G B 2 7 ? 11.834 31.343 -3.021 1.00 35.13 ? 16 G B OP1 1 ATOM 309 O OP2 . G B 2 7 ? 13.161 29.593 -1.691 1.00 30.86 ? 16 G B OP2 1 ATOM 310 O "O5'" . G B 2 7 ? 10.729 29.284 -2.167 1.00 35.60 ? 16 G B "O5'" 1 ATOM 311 C "C5'" . G B 2 7 ? 9.531 29.488 -2.898 1.00 34.61 ? 16 G B "C5'" 1 ATOM 312 C "C4'" . G B 2 7 ? 8.378 28.834 -2.189 1.00 34.67 ? 16 G B "C4'" 1 ATOM 313 O "O4'" . G B 2 7 ? 8.610 27.399 -2.140 1.00 34.01 ? 16 G B "O4'" 1 ATOM 314 C "C3'" . G B 2 7 ? 8.203 29.217 -0.730 1.00 34.40 ? 16 G B "C3'" 1 ATOM 315 O "O3'" . G B 2 7 ? 7.505 30.451 -0.577 1.00 34.25 ? 16 G B "O3'" 1 ATOM 316 C "C2'" . G B 2 7 ? 7.410 28.029 -0.207 1.00 32.45 ? 16 G B "C2'" 1 ATOM 317 O "O2'" . G B 2 7 ? 6.067 28.041 -0.643 1.00 33.59 ? 16 G B "O2'" 1 ATOM 318 C "C1'" . G B 2 7 ? 8.123 26.880 -0.915 1.00 30.78 ? 16 G B "C1'" 1 ATOM 319 N N9 . G B 2 7 ? 9.258 26.378 -0.149 1.00 28.55 ? 16 G B N9 1 ATOM 320 C C8 . G B 2 7 ? 10.589 26.664 -0.349 1.00 28.52 ? 16 G B C8 1 ATOM 321 N N7 . G B 2 7 ? 11.376 26.042 0.486 1.00 26.19 ? 16 G B N7 1 ATOM 322 C C5 . G B 2 7 ? 10.512 25.306 1.288 1.00 25.96 ? 16 G B C5 1 ATOM 323 C C6 . G B 2 7 ? 10.786 24.431 2.363 1.00 26.13 ? 16 G B C6 1 ATOM 324 O O6 . G B 2 7 ? 11.887 24.109 2.832 1.00 24.93 ? 16 G B O6 1 ATOM 325 N N1 . G B 2 7 ? 9.616 23.901 2.905 1.00 26.08 ? 16 G B N1 1 ATOM 326 C C2 . G B 2 7 ? 8.341 24.175 2.462 1.00 27.28 ? 16 G B C2 1 ATOM 327 N N2 . G B 2 7 ? 7.334 23.574 3.124 1.00 25.73 ? 16 G B N2 1 ATOM 328 N N3 . G B 2 7 ? 8.075 24.982 1.448 1.00 28.09 ? 16 G B N3 1 ATOM 329 C C4 . G B 2 7 ? 9.201 25.510 0.913 1.00 27.22 ? 16 G B C4 1 ATOM 330 P P . A B 2 8 ? 7.828 31.389 0.689 1.00 35.96 ? 17 A B P 1 ATOM 331 O OP1 . A B 2 8 ? 7.000 32.624 0.546 1.00 35.66 ? 17 A B OP1 1 ATOM 332 O OP2 . A B 2 8 ? 9.301 31.509 0.846 1.00 33.47 ? 17 A B OP2 1 ATOM 333 O "O5'" . A B 2 8 ? 7.277 30.552 1.926 1.00 32.21 ? 17 A B "O5'" 1 ATOM 334 C "C5'" . A B 2 8 ? 5.912 30.165 1.990 1.00 33.45 ? 17 A B "C5'" 1 ATOM 335 C "C4'" . A B 2 8 ? 5.714 29.104 3.051 1.00 34.05 ? 17 A B "C4'" 1 ATOM 336 O "O4'" . A B 2 8 ? 6.542 27.947 2.742 1.00 31.34 ? 17 A B "O4'" 1 ATOM 337 C "C3'" . A B 2 8 ? 6.150 29.463 4.463 1.00 32.90 ? 17 A B "C3'" 1 ATOM 338 O "O3'" . A B 2 8 ? 5.182 30.238 5.156 1.00 33.59 ? 17 A B "O3'" 1 ATOM 339 C "C2'" . A B 2 8 ? 6.281 28.089 5.098 1.00 31.75 ? 17 A B "C2'" 1 ATOM 340 O "O2'" . A B 2 8 ? 5.030 27.540 5.463 1.00 30.49 ? 17 A B "O2'" 1 ATOM 341 C "C1'" . A B 2 8 ? 6.902 27.292 3.949 1.00 30.66 ? 17 A B "C1'" 1 ATOM 342 N N9 . A B 2 8 ? 8.361 27.274 4.053 1.00 28.32 ? 17 A B N9 1 ATOM 343 C C8 . A B 2 8 ? 9.296 28.010 3.367 1.00 29.38 ? 17 A B C8 1 ATOM 344 N N7 . A B 2 8 ? 10.534 27.756 3.725 1.00 28.45 ? 17 A B N7 1 ATOM 345 C C5 . A B 2 8 ? 10.401 26.781 4.706 1.00 27.11 ? 17 A B C5 1 ATOM 346 C C6 . A B 2 8 ? 11.340 26.086 5.487 1.00 26.74 ? 17 A B C6 1 ATOM 347 N N6 . A B 2 8 ? 12.662 26.269 5.404 1.00 24.92 ? 17 A B N6 1 ATOM 348 N N1 . A B 2 8 ? 10.870 25.184 6.374 1.00 26.09 ? 17 A B N1 1 ATOM 349 C C2 . A B 2 8 ? 9.548 24.996 6.462 1.00 28.61 ? 17 A B C2 1 ATOM 350 N N3 . A B 2 8 ? 8.568 25.585 5.785 1.00 26.68 ? 17 A B N3 1 ATOM 351 C C4 . A B 2 8 ? 9.068 26.478 4.916 1.00 28.40 ? 17 A B C4 1 ATOM 352 P P . G B 2 9 ? 5.647 31.161 6.390 1.00 35.23 ? 18 G B P 1 ATOM 353 O OP1 . G B 2 9 ? 4.459 31.924 6.835 1.00 35.15 ? 18 G B OP1 1 ATOM 354 O OP2 . G B 2 9 ? 6.874 31.882 5.971 1.00 31.14 ? 18 G B OP2 1 ATOM 355 O "O5'" . G B 2 9 ? 6.065 30.136 7.540 1.00 34.02 ? 18 G B "O5'" 1 ATOM 356 C "C5'" . G B 2 9 ? 5.112 29.255 8.110 1.00 34.45 ? 18 G B "C5'" 1 ATOM 357 C "C4'" . G B 2 9 ? 5.776 28.302 9.086 1.00 35.05 ? 18 G B "C4'" 1 ATOM 358 O "O4'" . G B 2 9 ? 6.835 27.555 8.436 1.00 33.58 ? 18 G B "O4'" 1 ATOM 359 C "C3'" . G B 2 9 ? 6.511 28.882 10.281 1.00 34.81 ? 18 G B "C3'" 1 ATOM 360 O "O3'" . G B 2 9 ? 5.638 29.452 11.257 1.00 38.44 ? 18 G B "O3'" 1 ATOM 361 C "C2'" . G B 2 9 ? 7.302 27.668 10.762 1.00 33.22 ? 18 G B "C2'" 1 ATOM 362 O "O2'" . G B 2 9 ? 6.520 26.741 11.494 1.00 32.38 ? 18 G B "O2'" 1 ATOM 363 C "C1'" . G B 2 9 ? 7.698 27.025 9.431 1.00 31.42 ? 18 G B "C1'" 1 ATOM 364 N N9 . G B 2 9 ? 9.082 27.294 9.062 1.00 28.80 ? 18 G B N9 1 ATOM 365 C C8 . G B 2 9 ? 9.544 28.186 8.125 1.00 29.04 ? 18 G B C8 1 ATOM 366 N N7 . G B 2 9 ? 10.849 28.217 8.049 1.00 29.44 ? 18 G B N7 1 ATOM 367 C C5 . G B 2 9 ? 11.271 27.283 8.988 1.00 27.74 ? 18 G B C5 1 ATOM 368 C C6 . G B 2 9 ? 12.578 26.888 9.369 1.00 27.40 ? 18 G B C6 1 ATOM 369 O O6 . G B 2 9 ? 13.659 27.299 8.944 1.00 26.00 ? 18 G B O6 1 ATOM 370 N N1 . G B 2 9 ? 12.551 25.917 10.361 1.00 24.04 ? 18 G B N1 1 ATOM 371 C C2 . G B 2 9 ? 11.415 25.388 10.918 1.00 26.45 ? 18 G B C2 1 ATOM 372 N N2 . G B 2 9 ? 11.603 24.446 11.860 1.00 24.98 ? 18 G B N2 1 ATOM 373 N N3 . G B 2 9 ? 10.187 25.751 10.576 1.00 25.88 ? 18 G B N3 1 ATOM 374 C C4 . G B 2 9 ? 10.192 26.698 9.613 1.00 27.14 ? 18 G B C4 1 HETATM 375 O O1Y . CMY C 3 . ? 16.304 21.362 9.245 1.00 31.40 ? 102 CMY A O1Y 1 HETATM 376 C C1Y . CMY C 3 . ? 15.681 22.163 8.550 1.00 31.91 ? 102 CMY A C1Y 1 HETATM 377 N N1Y . CMY C 3 . ? 16.320 22.934 7.437 1.00 36.21 ? 102 CMY A N1Y 1 HETATM 378 C C2Y . CMY C 3 . ? 17.768 22.630 7.438 1.00 40.08 ? 102 CMY A C2Y 1 HETATM 379 C C3Y . CMY C 3 . ? 18.566 23.339 6.296 1.00 44.32 ? 102 CMY A C3Y 1 HETATM 380 C C4Y . CMY C 3 . ? 18.495 24.894 6.300 1.00 49.11 ? 102 CMY A C4Y 1 HETATM 381 C C5Y . CMY C 3 . ? 17.054 25.401 6.108 1.00 52.22 ? 102 CMY A C5Y 1 HETATM 382 C C6Y . CMY C 3 . ? 17.077 26.943 6.111 1.00 54.09 ? 102 CMY A C6Y 1 HETATM 383 C C7Y . CMY C 3 . ? 15.656 27.490 5.900 1.00 54.95 ? 102 CMY A C7Y 1 HETATM 384 N N2Y . CMY C 3 . ? 14.782 27.023 6.975 1.00 56.79 ? 102 CMY A N2Y 1 HETATM 385 O O1Y . CMY D 3 . ? 8.403 16.166 0.394 1.00 32.89 ? 105 CMY A O1Y 1 HETATM 386 C C1Y . CMY D 3 . ? 9.489 16.713 0.161 1.00 32.54 ? 105 CMY A C1Y 1 HETATM 387 N N1Y . CMY D 3 . ? 10.795 16.299 0.794 1.00 35.98 ? 105 CMY A N1Y 1 HETATM 388 C C2Y . CMY D 3 . ? 10.630 15.138 1.740 1.00 39.12 ? 105 CMY A C2Y 1 HETATM 389 C C3Y . CMY D 3 . ? 10.083 13.895 1.004 1.00 45.99 ? 105 CMY A C3Y 1 HETATM 390 C C4Y . CMY D 3 . ? 11.062 13.469 -0.108 1.00 50.41 ? 105 CMY A C4Y 1 HETATM 391 C C5Y . CMY D 3 . ? 10.569 12.201 -0.925 1.00 53.73 ? 105 CMY A C5Y 1 HETATM 392 C C6Y . CMY D 3 . ? 9.193 12.399 -1.695 1.00 56.44 ? 105 CMY A C6Y 1 HETATM 393 C C7Y . CMY D 3 . ? 8.001 12.721 -0.770 1.00 57.34 ? 105 CMY A C7Y 1 HETATM 394 N N2Y . CMY D 3 . ? 6.791 12.885 -1.588 1.00 59.37 ? 105 CMY A N2Y 1 HETATM 395 O O . HOH E 4 . ? 0.644 17.008 -0.371 1.00 30.44 ? 106 HOH A O 1 HETATM 396 O O . HOH E 4 . ? 8.806 13.253 -6.139 1.00 25.92 ? 107 HOH A O 1 HETATM 397 O O . HOH E 4 . ? 19.136 5.976 -14.031 1.00 35.71 ? 108 HOH A O 1 HETATM 398 O O . HOH E 4 . ? 14.483 10.931 -4.013 1.00 42.29 ? 109 HOH A O 1 HETATM 399 O O . HOH E 4 . ? 8.668 17.977 12.872 1.00 32.07 ? 110 HOH A O 1 HETATM 400 O O . HOH E 4 . ? 16.237 7.146 -12.633 1.00 36.93 ? 111 HOH A O 1 HETATM 401 O O . HOH E 4 . ? 8.625 15.384 -2.716 1.00 49.58 ? 112 HOH A O 1 HETATM 402 O O . HOH E 4 . ? 16.377 16.183 14.805 1.00 39.67 ? 113 HOH A O 1 HETATM 403 O O . HOH E 4 . ? 3.007 14.075 -3.011 1.00 45.86 ? 114 HOH A O 1 HETATM 404 O O . HOH E 4 . ? 13.657 18.612 2.644 1.00 37.83 ? 115 HOH A O 1 HETATM 405 O O . HOH E 4 . ? 13.185 13.949 -2.251 1.00 36.48 ? 116 HOH A O 1 HETATM 406 O O . HOH E 4 . ? 14.529 16.643 -0.089 1.00 45.17 ? 117 HOH A O 1 HETATM 407 O O . HOH E 4 . ? 12.364 10.435 -5.759 1.00 37.66 ? 118 HOH A O 1 HETATM 408 O O . HOH E 4 . ? 15.438 8.905 -15.164 1.00 47.69 ? 119 HOH A O 1 HETATM 409 O O . HOH E 4 . ? 21.637 22.670 11.113 1.00 37.48 ? 120 HOH A O 1 HETATM 410 O O . HOH E 4 . ? 11.853 9.912 -14.367 1.00 47.88 ? 121 HOH A O 1 HETATM 411 O O . HOH E 4 . ? 19.251 16.737 15.052 1.00 48.15 ? 122 HOH A O 1 HETATM 412 O O . HOH E 4 . ? 1.316 12.116 -4.005 1.00 56.12 ? 123 HOH A O 1 HETATM 413 O O . HOH E 4 . ? 17.628 7.440 -17.323 1.00 51.48 ? 124 HOH A O 1 HETATM 414 O O . HOH E 4 . ? 9.397 13.279 8.658 1.00 42.90 ? 125 HOH A O 1 HETATM 415 O O . HOH E 4 . ? -0.563 13.913 -3.783 1.00 50.59 ? 126 HOH A O 1 HETATM 416 O O . HOH E 4 . ? 19.344 14.113 16.247 1.00 38.54 ? 127 HOH A O 1 HETATM 417 O O . HOH E 4 . ? 14.644 20.237 5.634 1.00 45.07 ? 128 HOH A O 1 HETATM 418 O O . HOH E 4 . ? 21.386 18.273 16.257 1.00 51.76 ? 129 HOH A O 1 HETATM 419 O O . HOH E 4 . ? 17.372 14.336 10.721 1.00 55.64 ? 130 HOH A O 1 HETATM 420 O O . HOH E 4 . ? 19.176 15.654 12.547 1.00 57.39 ? 131 HOH A O 1 HETATM 421 O O . HOH F 4 . ? 12.742 29.602 6.113 1.00 29.75 ? 19 HOH B O 1 HETATM 422 O O . HOH F 4 . ? 14.481 24.659 2.819 1.00 34.37 ? 20 HOH B O 1 HETATM 423 O O . HOH F 4 . ? 9.053 30.141 6.102 1.00 37.32 ? 21 HOH B O 1 HETATM 424 O O . HOH F 4 . ? 11.984 29.815 1.248 1.00 41.07 ? 22 HOH B O 1 HETATM 425 O O . HOH F 4 . ? 23.557 5.256 1.596 1.00 27.12 ? 23 HOH B O 1 HETATM 426 O O . HOH F 4 . ? 13.862 23.284 -6.891 1.00 31.23 ? 24 HOH B O 1 HETATM 427 O O . HOH F 4 . ? 24.215 6.463 5.827 1.00 32.57 ? 25 HOH B O 1 HETATM 428 O O . HOH F 4 . ? 4.286 28.094 13.429 1.00 34.30 ? 26 HOH B O 1 HETATM 429 O O . HOH F 4 . ? 5.068 34.547 -0.091 1.00 40.96 ? 27 HOH B O 1 HETATM 430 O O . HOH F 4 . ? 7.705 34.439 4.895 1.00 53.01 ? 28 HOH B O 1 HETATM 431 O O . HOH F 4 . ? 16.085 22.455 0.969 1.00 37.39 ? 29 HOH B O 1 HETATM 432 O O . HOH F 4 . ? 27.817 15.556 2.328 1.00 38.97 ? 30 HOH B O 1 HETATM 433 O O . HOH F 4 . ? 21.981 13.289 6.097 1.00 52.50 ? 31 HOH B O 1 HETATM 434 O O . HOH F 4 . ? 24.168 7.158 -0.156 1.00 42.86 ? 32 HOH B O 1 HETATM 435 O O . HOH F 4 . ? 15.677 19.985 2.304 1.00 43.15 ? 33 HOH B O 1 HETATM 436 O O . HOH F 4 . ? 17.956 18.947 3.946 1.00 42.08 ? 34 HOH B O 1 HETATM 437 O O . HOH F 4 . ? 22.889 15.887 -5.689 1.00 37.22 ? 35 HOH B O 1 HETATM 438 O O . HOH F 4 . ? 19.239 17.271 0.397 1.00 49.60 ? 36 HOH B O 1 HETATM 439 O O . HOH F 4 . ? 27.476 12.920 2.344 1.00 52.77 ? 37 HOH B O 1 HETATM 440 O O . HOH F 4 . ? 25.306 4.253 5.428 1.00 32.86 ? 38 HOH B O 1 HETATM 441 O O . HOH F 4 . ? 19.937 19.786 6.430 1.00 47.47 ? 39 HOH B O 1 HETATM 442 O O . HOH F 4 . ? 13.425 30.465 -6.876 1.00 44.46 ? 40 HOH B O 1 HETATM 443 O O . HOH F 4 . ? 6.303 35.685 2.213 1.00 56.80 ? 41 HOH B O 1 HETATM 444 O O . HOH F 4 . ? 25.801 23.271 -1.230 1.00 46.79 ? 42 HOH B O 1 HETATM 445 O O . HOH F 4 . ? 20.873 27.842 -1.911 1.00 46.38 ? 43 HOH B O 1 HETATM 446 O O . HOH F 4 . ? 5.089 31.164 -1.652 1.00 56.76 ? 44 HOH B O 1 HETATM 447 O O . HOH F 4 . ? 23.288 16.377 6.173 1.00 58.94 ? 45 HOH B O 1 HETATM 448 O O . HOH F 4 . ? 15.148 9.040 3.950 1.00 55.08 ? 46 HOH B O 1 HETATM 449 O O . HOH F 4 . ? 30.437 14.590 4.014 1.00 47.67 ? 47 HOH B O 1 HETATM 450 O O . HOH F 4 . ? 15.162 5.859 3.765 1.00 47.28 ? 48 HOH B O 1 HETATM 451 O O . HOH F 4 . ? 20.362 17.085 5.600 1.00 50.27 ? 49 HOH B O 1 HETATM 452 O O . HOH F 4 . ? 10.830 31.379 3.848 1.00 35.12 ? 50 HOH B O 1 HETATM 453 O O . HOH F 4 . ? 25.254 15.132 7.476 1.00 52.84 ? 51 HOH B O 1 HETATM 454 O O . HOH F 4 . ? 17.952 9.778 2.577 1.00 50.32 ? 52 HOH B O 1 HETATM 455 O O . HOH F 4 . ? 11.312 9.980 2.318 1.00 54.29 ? 53 HOH B O 1 HETATM 456 O O . HOH F 4 . ? 27.225 17.860 7.788 1.00 44.98 ? 54 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT A . n A 1 2 OMU 2 2 2 OMU THY A . n A 1 3 DC 3 3 3 DC CYT A . n A 1 4 DT 4 4 4 DT THY A . n A 1 5 OMU 5 5 5 OMU THY A . n A 1 6 DC 6 6 6 DC CYT A . n A 1 7 DT 7 7 7 DT THY A . n A 1 8 DT 8 8 8 DT THY A . n A 1 9 DC 9 9 9 DC CYT A . n B 2 1 G 1 10 10 G GUA B . n B 2 2 A 2 11 11 A ADE B . n B 2 3 A 3 12 12 A ADE B . n B 2 4 G 4 13 13 G GUA B . n B 2 5 A 5 14 14 A ADE B . n B 2 6 A 6 15 15 A ADE B . n B 2 7 G 7 16 16 G GUA B . n B 2 8 A 8 17 17 A ADE B . n B 2 9 G 9 18 18 G GUA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CMY 1 102 2 CMY THY A . D 3 CMY 1 105 5 CMY THY A . E 4 HOH 1 106 2 HOH HOH A . E 4 HOH 2 107 3 HOH HOH A . E 4 HOH 3 108 4 HOH HOH A . E 4 HOH 4 109 5 HOH HOH A . E 4 HOH 5 110 7 HOH HOH A . E 4 HOH 6 111 13 HOH HOH A . E 4 HOH 7 112 15 HOH HOH A . E 4 HOH 8 113 16 HOH HOH A . E 4 HOH 9 114 20 HOH HOH A . E 4 HOH 10 115 21 HOH HOH A . E 4 HOH 11 116 26 HOH HOH A . E 4 HOH 12 117 29 HOH HOH A . E 4 HOH 13 118 32 HOH HOH A . E 4 HOH 14 119 33 HOH HOH A . E 4 HOH 15 120 35 HOH HOH A . E 4 HOH 16 121 36 HOH HOH A . E 4 HOH 17 122 37 HOH HOH A . E 4 HOH 18 123 40 HOH HOH A . E 4 HOH 19 124 48 HOH HOH A . E 4 HOH 20 125 49 HOH HOH A . E 4 HOH 21 126 50 HOH HOH A . E 4 HOH 22 127 51 HOH HOH A . E 4 HOH 23 128 52 HOH HOH A . E 4 HOH 24 129 53 HOH HOH A . E 4 HOH 25 130 58 HOH HOH A . E 4 HOH 26 131 60 HOH HOH A . F 4 HOH 1 19 1 HOH HOH B . F 4 HOH 2 20 6 HOH HOH B . F 4 HOH 3 21 8 HOH HOH B . F 4 HOH 4 22 9 HOH HOH B . F 4 HOH 5 23 10 HOH HOH B . F 4 HOH 6 24 11 HOH HOH B . F 4 HOH 7 25 12 HOH HOH B . F 4 HOH 8 26 14 HOH HOH B . F 4 HOH 9 27 17 HOH HOH B . F 4 HOH 10 28 18 HOH HOH B . F 4 HOH 11 29 19 HOH HOH B . F 4 HOH 12 30 22 HOH HOH B . F 4 HOH 13 31 23 HOH HOH B . F 4 HOH 14 32 24 HOH HOH B . F 4 HOH 15 33 25 HOH HOH B . F 4 HOH 16 34 27 HOH HOH B . F 4 HOH 17 35 28 HOH HOH B . F 4 HOH 18 36 30 HOH HOH B . F 4 HOH 19 37 31 HOH HOH B . F 4 HOH 20 38 34 HOH HOH B . F 4 HOH 21 39 38 HOH HOH B . F 4 HOH 22 40 39 HOH HOH B . F 4 HOH 23 41 41 HOH HOH B . F 4 HOH 24 42 42 HOH HOH B . F 4 HOH 25 43 43 HOH HOH B . F 4 HOH 26 44 44 HOH HOH B . F 4 HOH 27 45 45 HOH HOH B . F 4 HOH 28 46 46 HOH HOH B . F 4 HOH 29 47 47 HOH HOH B . F 4 HOH 30 48 54 HOH HOH B . F 4 HOH 31 49 55 HOH HOH B . F 4 HOH 32 50 56 HOH HOH B . F 4 HOH 33 51 57 HOH HOH B . F 4 HOH 34 52 59 HOH HOH B . F 4 HOH 35 53 61 HOH HOH B . F 4 HOH 36 54 62 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A OMU 2 A OMU 2 ? U ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; 2 A OMU 5 A OMU 5 ? U ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-17 2 'Structure model' 1 1 2007-12-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-02-17 5 'Structure model' 1 4 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Source and taxonomy' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_entity_src_syn 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_site 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_entity_src_syn.details' 2 4 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 3 4 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 4 4 'Structure model' '_struct_conn.pdbx_dist_value' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 20 5 'Structure model' '_database_2.pdbx_DOI' 21 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.1 ? 4 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 1 ? ? 0.072 'SIDE CHAIN' 2 1 DC A 3 ? ? 0.079 'SIDE CHAIN' 3 1 DC A 6 ? ? 0.090 'SIDE CHAIN' 4 1 DT A 7 ? ? 0.076 'SIDE CHAIN' 5 1 DT A 8 ? ? 0.069 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 CMY O1Y O N N 38 CMY C1Y C N N 39 CMY N1Y N N N 40 CMY C2Y C N N 41 CMY C3Y C N N 42 CMY C4Y C N N 43 CMY C5Y C N N 44 CMY C6Y C N N 45 CMY C7Y C N N 46 CMY N2Y N N N 47 CMY O1 O N N 48 CMY H1Y H N N 49 CMY H1 H N N 50 CMY H2Y1 H N N 51 CMY H2Y2 H N N 52 CMY H3Y1 H N N 53 CMY H3Y2 H N N 54 CMY H4Y1 H N N 55 CMY H4Y2 H N N 56 CMY H5Y1 H N N 57 CMY H5Y2 H N N 58 CMY H6Y1 H N N 59 CMY H6Y2 H N N 60 CMY H7Y1 H N N 61 CMY H7Y2 H N N 62 CMY H11 H N N 63 CMY H12 H N N 64 DC OP3 O N N 65 DC P P N N 66 DC OP1 O N N 67 DC OP2 O N N 68 DC "O5'" O N N 69 DC "C5'" C N N 70 DC "C4'" C N R 71 DC "O4'" O N N 72 DC "C3'" C N S 73 DC "O3'" O N N 74 DC "C2'" C N N 75 DC "C1'" C N R 76 DC N1 N N N 77 DC C2 C N N 78 DC O2 O N N 79 DC N3 N N N 80 DC C4 C N N 81 DC N4 N N N 82 DC C5 C N N 83 DC C6 C N N 84 DC HOP3 H N N 85 DC HOP2 H N N 86 DC "H5'" H N N 87 DC "H5''" H N N 88 DC "H4'" H N N 89 DC "H3'" H N N 90 DC "HO3'" H N N 91 DC "H2'" H N N 92 DC "H2''" H N N 93 DC "H1'" H N N 94 DC H41 H N N 95 DC H42 H N N 96 DC H5 H N N 97 DC H6 H N N 98 DT OP3 O N N 99 DT P P N N 100 DT OP1 O N N 101 DT OP2 O N N 102 DT "O5'" O N N 103 DT "C5'" C N N 104 DT "C4'" C N R 105 DT "O4'" O N N 106 DT "C3'" C N S 107 DT "O3'" O N N 108 DT "C2'" C N N 109 DT "C1'" C N R 110 DT N1 N N N 111 DT C2 C N N 112 DT O2 O N N 113 DT N3 N N N 114 DT C4 C N N 115 DT O4 O N N 116 DT C5 C N N 117 DT C7 C N N 118 DT C6 C N N 119 DT HOP3 H N N 120 DT HOP2 H N N 121 DT "H5'" H N N 122 DT "H5''" H N N 123 DT "H4'" H N N 124 DT "H3'" H N N 125 DT "HO3'" H N N 126 DT "H2'" H N N 127 DT "H2''" H N N 128 DT "H1'" H N N 129 DT H3 H N N 130 DT H71 H N N 131 DT H72 H N N 132 DT H73 H N N 133 DT H6 H N N 134 G OP3 O N N 135 G P P N N 136 G OP1 O N N 137 G OP2 O N N 138 G "O5'" O N N 139 G "C5'" C N N 140 G "C4'" C N R 141 G "O4'" O N N 142 G "C3'" C N S 143 G "O3'" O N N 144 G "C2'" C N R 145 G "O2'" O N N 146 G "C1'" C N R 147 G N9 N Y N 148 G C8 C Y N 149 G N7 N Y N 150 G C5 C Y N 151 G C6 C N N 152 G O6 O N N 153 G N1 N N N 154 G C2 C N N 155 G N2 N N N 156 G N3 N N N 157 G C4 C Y N 158 G HOP3 H N N 159 G HOP2 H N N 160 G "H5'" H N N 161 G "H5''" H N N 162 G "H4'" H N N 163 G "H3'" H N N 164 G "HO3'" H N N 165 G "H2'" H N N 166 G "HO2'" H N N 167 G "H1'" H N N 168 G H8 H N N 169 G H1 H N N 170 G H21 H N N 171 G H22 H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 OMU N1 N N N 176 OMU C2 C N N 177 OMU N3 N N N 178 OMU C4 C N N 179 OMU C5 C N N 180 OMU C6 C N N 181 OMU O2 O N N 182 OMU O4 O N N 183 OMU "C1'" C N R 184 OMU "C2'" C N R 185 OMU "O2'" O N N 186 OMU CM2 C N N 187 OMU "C3'" C N R 188 OMU "C4'" C N R 189 OMU "O3'" O N N 190 OMU "O4'" O N N 191 OMU "C5'" C N N 192 OMU "O5'" O N N 193 OMU P P N N 194 OMU OP1 O N N 195 OMU OP2 O N N 196 OMU OP3 O N N 197 OMU HN3 H N N 198 OMU H5 H N N 199 OMU H6 H N N 200 OMU "H1'" H N N 201 OMU "H2'" H N N 202 OMU HM21 H N N 203 OMU HM22 H N N 204 OMU HM23 H N N 205 OMU "H3'" H N N 206 OMU "H4'" H N N 207 OMU "HO3'" H N N 208 OMU "H5'" H N N 209 OMU "H5''" H N N 210 OMU HOP2 H N N 211 OMU HOP3 H N N 212 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 CMY O1Y C1Y sing N N 40 CMY O1Y H1Y sing N N 41 CMY C1Y N1Y sing N N 42 CMY C1Y O1 doub N N 43 CMY N1Y C2Y sing N N 44 CMY N1Y H1 sing N N 45 CMY C2Y C3Y sing N N 46 CMY C2Y H2Y1 sing N N 47 CMY C2Y H2Y2 sing N N 48 CMY C3Y C4Y sing N N 49 CMY C3Y H3Y1 sing N N 50 CMY C3Y H3Y2 sing N N 51 CMY C4Y C5Y sing N N 52 CMY C4Y H4Y1 sing N N 53 CMY C4Y H4Y2 sing N N 54 CMY C5Y C6Y sing N N 55 CMY C5Y H5Y1 sing N N 56 CMY C5Y H5Y2 sing N N 57 CMY C6Y C7Y sing N N 58 CMY C6Y H6Y1 sing N N 59 CMY C6Y H6Y2 sing N N 60 CMY C7Y N2Y sing N N 61 CMY C7Y H7Y1 sing N N 62 CMY C7Y H7Y2 sing N N 63 CMY N2Y H11 sing N N 64 CMY N2Y H12 sing N N 65 DC OP3 P sing N N 66 DC OP3 HOP3 sing N N 67 DC P OP1 doub N N 68 DC P OP2 sing N N 69 DC P "O5'" sing N N 70 DC OP2 HOP2 sing N N 71 DC "O5'" "C5'" sing N N 72 DC "C5'" "C4'" sing N N 73 DC "C5'" "H5'" sing N N 74 DC "C5'" "H5''" sing N N 75 DC "C4'" "O4'" sing N N 76 DC "C4'" "C3'" sing N N 77 DC "C4'" "H4'" sing N N 78 DC "O4'" "C1'" sing N N 79 DC "C3'" "O3'" sing N N 80 DC "C3'" "C2'" sing N N 81 DC "C3'" "H3'" sing N N 82 DC "O3'" "HO3'" sing N N 83 DC "C2'" "C1'" sing N N 84 DC "C2'" "H2'" sing N N 85 DC "C2'" "H2''" sing N N 86 DC "C1'" N1 sing N N 87 DC "C1'" "H1'" sing N N 88 DC N1 C2 sing N N 89 DC N1 C6 sing N N 90 DC C2 O2 doub N N 91 DC C2 N3 sing N N 92 DC N3 C4 doub N N 93 DC C4 N4 sing N N 94 DC C4 C5 sing N N 95 DC N4 H41 sing N N 96 DC N4 H42 sing N N 97 DC C5 C6 doub N N 98 DC C5 H5 sing N N 99 DC C6 H6 sing N N 100 DT OP3 P sing N N 101 DT OP3 HOP3 sing N N 102 DT P OP1 doub N N 103 DT P OP2 sing N N 104 DT P "O5'" sing N N 105 DT OP2 HOP2 sing N N 106 DT "O5'" "C5'" sing N N 107 DT "C5'" "C4'" sing N N 108 DT "C5'" "H5'" sing N N 109 DT "C5'" "H5''" sing N N 110 DT "C4'" "O4'" sing N N 111 DT "C4'" "C3'" sing N N 112 DT "C4'" "H4'" sing N N 113 DT "O4'" "C1'" sing N N 114 DT "C3'" "O3'" sing N N 115 DT "C3'" "C2'" sing N N 116 DT "C3'" "H3'" sing N N 117 DT "O3'" "HO3'" sing N N 118 DT "C2'" "C1'" sing N N 119 DT "C2'" "H2'" sing N N 120 DT "C2'" "H2''" sing N N 121 DT "C1'" N1 sing N N 122 DT "C1'" "H1'" sing N N 123 DT N1 C2 sing N N 124 DT N1 C6 sing N N 125 DT C2 O2 doub N N 126 DT C2 N3 sing N N 127 DT N3 C4 sing N N 128 DT N3 H3 sing N N 129 DT C4 O4 doub N N 130 DT C4 C5 sing N N 131 DT C5 C7 sing N N 132 DT C5 C6 doub N N 133 DT C7 H71 sing N N 134 DT C7 H72 sing N N 135 DT C7 H73 sing N N 136 DT C6 H6 sing N N 137 G OP3 P sing N N 138 G OP3 HOP3 sing N N 139 G P OP1 doub N N 140 G P OP2 sing N N 141 G P "O5'" sing N N 142 G OP2 HOP2 sing N N 143 G "O5'" "C5'" sing N N 144 G "C5'" "C4'" sing N N 145 G "C5'" "H5'" sing N N 146 G "C5'" "H5''" sing N N 147 G "C4'" "O4'" sing N N 148 G "C4'" "C3'" sing N N 149 G "C4'" "H4'" sing N N 150 G "O4'" "C1'" sing N N 151 G "C3'" "O3'" sing N N 152 G "C3'" "C2'" sing N N 153 G "C3'" "H3'" sing N N 154 G "O3'" "HO3'" sing N N 155 G "C2'" "O2'" sing N N 156 G "C2'" "C1'" sing N N 157 G "C2'" "H2'" sing N N 158 G "O2'" "HO2'" sing N N 159 G "C1'" N9 sing N N 160 G "C1'" "H1'" sing N N 161 G N9 C8 sing Y N 162 G N9 C4 sing Y N 163 G C8 N7 doub Y N 164 G C8 H8 sing N N 165 G N7 C5 sing Y N 166 G C5 C6 sing N N 167 G C5 C4 doub Y N 168 G C6 O6 doub N N 169 G C6 N1 sing N N 170 G N1 C2 sing N N 171 G N1 H1 sing N N 172 G C2 N2 sing N N 173 G C2 N3 doub N N 174 G N2 H21 sing N N 175 G N2 H22 sing N N 176 G N3 C4 sing N N 177 HOH O H1 sing N N 178 HOH O H2 sing N N 179 OMU N1 C2 sing N N 180 OMU N1 C6 sing N N 181 OMU N1 "C1'" sing N N 182 OMU C2 N3 sing N N 183 OMU C2 O2 doub N N 184 OMU N3 C4 sing N N 185 OMU N3 HN3 sing N N 186 OMU C4 C5 sing N N 187 OMU C4 O4 doub N N 188 OMU C5 C6 doub N N 189 OMU C5 H5 sing N N 190 OMU C6 H6 sing N N 191 OMU "C1'" "C2'" sing N N 192 OMU "C1'" "O4'" sing N N 193 OMU "C1'" "H1'" sing N N 194 OMU "C2'" "O2'" sing N N 195 OMU "C2'" "C3'" sing N N 196 OMU "C2'" "H2'" sing N N 197 OMU "O2'" CM2 sing N N 198 OMU CM2 HM21 sing N N 199 OMU CM2 HM22 sing N N 200 OMU CM2 HM23 sing N N 201 OMU "C3'" "C4'" sing N N 202 OMU "C3'" "O3'" sing N N 203 OMU "C3'" "H3'" sing N N 204 OMU "C4'" "O4'" sing N N 205 OMU "C4'" "C5'" sing N N 206 OMU "C4'" "H4'" sing N N 207 OMU "O3'" "HO3'" sing N N 208 OMU "C5'" "O5'" sing N N 209 OMU "C5'" "H5'" sing N N 210 OMU "C5'" "H5''" sing N N 211 OMU "O5'" P sing N N 212 OMU P OP1 doub N N 213 OMU P OP2 sing N N 214 OMU P OP3 sing N N 215 OMU OP2 HOP2 sing N N 216 OMU OP3 HOP3 sing N N 217 # _ndb_struct_conf_na.entry_id 2DQQ _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B G 9 1_555 0.163 -0.036 -0.726 18.497 2.490 -3.996 1 A_DC1:G18_B A 1 ? B 18 ? 19 1 1 A OMU 2 1_555 B A 8 1_555 -0.433 -0.100 0.022 3.695 -12.239 3.503 2 A_OMU2:A17_B A 2 ? B 17 ? 20 1 1 A DC 3 1_555 B G 7 1_555 0.376 -0.170 -0.284 9.496 3.079 1.970 3 A_DC3:G16_B A 3 ? B 16 ? 19 1 1 A DT 4 1_555 B A 6 1_555 0.079 -0.031 -0.521 11.089 -11.868 0.640 4 A_DT4:A15_B A 4 ? B 15 ? 20 1 1 A OMU 5 1_555 B A 5 1_555 -0.154 -0.146 -0.124 3.561 -20.394 7.547 5 A_OMU5:A14_B A 5 ? B 14 ? 20 1 1 A DC 6 1_555 B G 4 1_555 0.185 -0.197 -0.420 2.013 0.540 -1.084 6 A_DC6:G13_B A 6 ? B 13 ? 19 1 1 A DT 7 1_555 B A 3 1_555 -0.236 -0.013 -0.617 10.561 -1.407 -5.247 7 A_DT7:A12_B A 7 ? B 12 ? 20 1 1 A DT 8 1_555 B A 2 1_555 -0.204 -0.184 -0.802 22.403 -0.482 -3.718 8 A_DT8:A11_B A 8 ? B 11 ? 20 1 1 A DC 9 1_555 B G 1 1_555 0.543 -0.078 -0.685 23.729 -2.757 -4.456 9 A_DC9:G10_B A 9 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B G 9 1_555 A OMU 2 1_555 B A 8 1_555 -0.105 -2.455 3.873 -8.861 -1.538 26.949 -4.578 -2.259 3.844 -3.189 18.376 28.384 1 AA_DC1OMU2:A17G18_BB A 1 ? B 18 ? A 2 ? B 17 ? 1 A OMU 2 1_555 B A 8 1_555 A DC 3 1_555 B G 7 1_555 -0.828 -1.409 3.095 -0.887 8.592 32.135 -3.749 1.315 2.661 15.182 1.567 33.246 2 AA_OMU2DC3:G16A17_BB A 2 ? B 17 ? A 3 ? B 16 ? 1 A DC 3 1_555 B G 7 1_555 A DT 4 1_555 B A 6 1_555 -0.093 -1.436 3.347 0.881 6.293 31.635 -3.684 0.321 3.009 11.399 -1.596 32.250 3 AA_DC3DT4:A15G16_BB A 3 ? B 16 ? A 4 ? B 15 ? 1 A DT 4 1_555 B A 6 1_555 A OMU 5 1_555 B A 5 1_555 0.430 -1.167 3.487 -3.252 4.601 30.678 -3.076 -1.441 3.220 8.606 6.081 31.179 4 AA_DT4OMU5:A14A15_BB A 4 ? B 15 ? A 5 ? B 14 ? 1 A OMU 5 1_555 B A 5 1_555 A DC 6 1_555 B G 4 1_555 -0.564 -1.764 3.281 0.274 16.457 30.827 -5.136 0.979 2.094 28.549 -0.475 34.852 5 AA_OMU5DC6:G13A14_BB A 5 ? B 14 ? A 6 ? B 13 ? 1 A DC 6 1_555 B G 4 1_555 A DT 7 1_555 B A 3 1_555 -0.097 -1.312 3.196 1.720 9.647 27.299 -4.564 0.541 2.581 19.654 -3.504 28.973 6 AA_DC6DT7:A12G13_BB A 6 ? B 13 ? A 7 ? B 12 ? 1 A DT 7 1_555 B A 3 1_555 A DT 8 1_555 B A 2 1_555 -0.470 -1.614 3.144 -1.056 6.789 24.738 -5.359 0.791 2.632 15.470 2.405 25.660 7 AA_DT7DT8:A11A12_BB A 7 ? B 12 ? A 8 ? B 11 ? 1 A DT 8 1_555 B A 2 1_555 A DC 9 1_555 B G 1 1_555 0.494 -1.438 3.551 -1.449 6.467 36.868 -3.128 -0.968 3.241 10.125 2.269 37.438 8 AA_DT8DC9:G10A11_BB A 8 ? B 11 ? A 9 ? B 10 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '(6-AMINOHEXYL)CARBAMIC ACID' CMY 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 479D _pdbx_initial_refinement_model.details 'PDB ENTRY 479D' #