data_395D # _entry.id 395D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 395D pdb_0000395d 10.2210/pdb395d/pdb RCSB ADJ0112 ? ? WWPDB D_1000178859 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-05-01 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 395D _pdbx_database_status.recvd_initial_deposition_date 1998-04-29 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ban, C.' 1 'Sundaralingam, M.' 2 # _citation.id primary _citation.title 'Crystal Structures of Two Isomorphous A-DNA Decamers d(GTACGCGTAC) and d(GGCCGCGGCC)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ban, C.' 1 ? primary 'Ramakrishnan, B.' 2 ? primary 'Sundaralingam, M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*AP*C)-3') ; 3045.005 1 ? ? ? ? 2 water nat water 18.015 40 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DT)(DA)(DC)(DG)(DC)(DG)(DT)(DA)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GTACGCGTAC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DA n 1 4 DC n 1 5 DG n 1 6 DC n 1 7 DG n 1 8 DT n 1 9 DA n 1 10 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DT 2 2 2 DT T A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DC 10 10 10 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 101 101 HOH HOH A . B 2 HOH 2 102 102 HOH HOH A . B 2 HOH 3 103 103 HOH HOH A . B 2 HOH 4 104 104 HOH HOH A . B 2 HOH 5 105 105 HOH HOH A . B 2 HOH 6 106 106 HOH HOH A . B 2 HOH 7 107 107 HOH HOH A . B 2 HOH 8 108 108 HOH HOH A . B 2 HOH 9 109 109 HOH HOH A . B 2 HOH 10 110 110 HOH HOH A . B 2 HOH 11 111 111 HOH HOH A . B 2 HOH 12 112 112 HOH HOH A . B 2 HOH 13 113 113 HOH HOH A . B 2 HOH 14 114 114 HOH HOH A . B 2 HOH 15 115 115 HOH HOH A . B 2 HOH 16 116 116 HOH HOH A . B 2 HOH 17 117 117 HOH HOH A . B 2 HOH 18 118 118 HOH HOH A . B 2 HOH 19 119 119 HOH HOH A . B 2 HOH 20 120 120 HOH HOH A . B 2 HOH 21 121 121 HOH HOH A . B 2 HOH 22 122 122 HOH HOH A . B 2 HOH 23 123 123 HOH HOH A . B 2 HOH 24 124 124 HOH HOH A . B 2 HOH 25 125 125 HOH HOH A . B 2 HOH 26 126 126 HOH HOH A . B 2 HOH 27 127 127 HOH HOH A . B 2 HOH 28 128 128 HOH HOH A . B 2 HOH 29 129 129 HOH HOH A . B 2 HOH 30 130 130 HOH HOH A . B 2 HOH 31 131 131 HOH HOH A . B 2 HOH 32 132 132 HOH HOH A . B 2 HOH 33 133 133 HOH HOH A . B 2 HOH 34 134 134 HOH HOH A . B 2 HOH 35 135 135 HOH HOH A . B 2 HOH 36 136 136 HOH HOH A . B 2 HOH 37 137 137 HOH HOH A . B 2 HOH 38 138 138 HOH HOH A . B 2 HOH 39 139 139 HOH HOH A . B 2 HOH 40 140 140 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement 3.2 ? 1 XENGEN 'data reduction' . ? 2 XENGEN 'data scaling' . ? 3 # _cell.entry_id 395D _cell.length_a 39.260 _cell.length_b 39.260 _cell.length_c 77.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 395D _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 395D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_percent_sol 56.67 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.00 _exptl_crystal_grow.pdbx_details 'pH 6.00, VAPOR DIFFUSION, HANGING DROP, temperature 291.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 NA-CACODYLATE ? ? ? 1 3 1 'COBALT HEXAMINE' ? ? ? 1 4 1 MPD ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date 1995-07-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 395D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.000 _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 2656 _reflns.number_all ? _reflns.percent_possible_obs 96.000 _reflns.pdbx_Rmerge_I_obs 0.0250000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.000 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 395D _refine.ls_number_reflns_obs 2089 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1950000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1950000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 242 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.027 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.90 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file PARAM11.DNA _pdbx_xplor_file.topol_file ? _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 395D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 395D _struct.title 'CRYSTAL STRUCTURES OF TWO ISOMORPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 395D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 395D _struct_ref.pdbx_db_accession 395D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 395D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 395D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 38.8500000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 A DA 9 N1 ? ? A DT 2 A DA 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 A DA 9 N6 ? ? A DT 2 A DA 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 3 A DT 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 3 A DT 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 4 A DG 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 4 A DG 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 4 A DG 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 4 N3 ? ? A DG 7 A DC 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 4 O2 ? ? A DG 7 A DC 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 4 N4 ? ? A DG 7 A DC 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 8 A DA 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 8 A DA 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 9 N1 ? ? ? 1_555 A DT 2 N3 ? ? A DA 9 A DT 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 9 N6 ? ? ? 1_555 A DT 2 O4 ? ? A DA 9 A DT 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 113 ? ? O A HOH 115 ? ? 1.99 2 1 O A HOH 126 ? ? O A HOH 138 ? ? 2.12 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 A DG 1 ? ? N7 A DG 1 ? ? 1.452 1.388 0.064 0.006 N 2 1 C4 A DA 3 ? ? C5 A DA 3 ? ? 1.306 1.383 -0.077 0.007 N 3 1 C6 A DA 3 ? ? N1 A DA 3 ? ? 1.300 1.351 -0.051 0.007 N 4 1 C5 A DA 3 ? ? N7 A DA 3 ? ? 1.433 1.388 0.045 0.006 N 5 1 "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? 1.420 1.521 -0.101 0.010 N 6 1 "C3'" A DC 6 ? ? "C2'" A DC 6 ? ? 1.468 1.516 -0.048 0.008 N 7 1 N1 A DG 7 ? ? C2 A DG 7 ? ? 1.430 1.373 0.057 0.008 N 8 1 C4 A DG 7 ? ? C5 A DG 7 ? ? 1.431 1.379 0.052 0.007 N 9 1 "C4'" A DT 8 ? ? "C3'" A DT 8 ? ? 1.444 1.521 -0.077 0.010 N 10 1 N9 A DA 9 ? ? C4 A DA 9 ? ? 1.332 1.374 -0.042 0.006 N 11 1 C6 A DA 9 ? ? N6 A DA 9 ? ? 1.279 1.335 -0.056 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" A DG 1 ? ? "C3'" A DG 1 ? ? "C2'" A DG 1 ? ? 96.97 102.20 -5.23 0.70 N 2 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.74 108.30 2.44 0.30 N 3 1 C5 A DG 1 ? ? N7 A DG 1 ? ? C8 A DG 1 ? ? 100.61 104.30 -3.69 0.50 N 4 1 N7 A DG 1 ? ? C8 A DG 1 ? ? N9 A DG 1 ? ? 117.31 113.10 4.21 0.50 N 5 1 "C4'" A DT 2 ? ? "C3'" A DT 2 ? ? "C2'" A DT 2 ? ? 95.08 102.20 -7.12 0.70 N 6 1 N1 A DT 2 ? ? C2 A DT 2 ? ? N3 A DT 2 ? ? 110.60 114.60 -4.00 0.60 N 7 1 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 118.42 122.90 -4.49 0.60 N 8 1 "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? "C2'" A DA 3 ? ? 96.46 102.20 -5.74 0.70 N 9 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 111.18 108.30 2.88 0.30 N 10 1 C2 A DA 3 ? ? N3 A DA 3 ? ? C4 A DA 3 ? ? 107.47 110.60 -3.13 0.50 N 11 1 C5 A DA 3 ? ? N7 A DA 3 ? ? C8 A DA 3 ? ? 100.64 103.90 -3.26 0.50 N 12 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 115.04 108.30 6.74 0.30 N 13 1 "O3'" A DC 4 ? ? P A DG 5 ? ? OP2 A DG 5 ? ? 135.43 110.50 24.93 1.10 Y 14 1 "O3'" A DC 4 ? ? P A DG 5 ? ? OP1 A DG 5 ? ? 83.50 105.20 -21.70 2.20 Y 15 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP2 A DC 6 ? ? 132.90 110.50 22.40 1.10 Y 16 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP1 A DC 6 ? ? 85.05 105.20 -20.15 2.20 Y 17 1 N3 A DC 6 ? ? C4 A DC 6 ? ? C5 A DC 6 ? ? 119.44 121.90 -2.46 0.40 N 18 1 "O3'" A DC 6 ? ? P A DG 7 ? ? OP1 A DG 7 ? ? 91.30 105.20 -13.90 2.20 Y 19 1 "O5'" A DG 7 ? ? "C5'" A DG 7 ? ? "C4'" A DG 7 ? ? 104.48 109.40 -4.92 0.80 N 20 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.46 108.30 3.16 0.30 N 21 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.42 122.90 -4.48 0.60 N 22 1 "O3'" A DT 8 ? ? P A DA 9 ? ? "O5'" A DA 9 ? ? 116.35 104.00 12.35 1.90 Y 23 1 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.80 108.30 2.50 0.30 N 24 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 113.79 108.30 5.49 0.30 N 25 1 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 122.98 118.90 4.08 0.60 N 26 1 N3 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 116.47 121.90 -5.43 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 2 ? ? 0.078 'SIDE CHAIN' 2 1 DA A 3 ? ? 0.069 'SIDE CHAIN' 3 1 DC A 4 ? ? 0.054 'SIDE CHAIN' 4 1 DG A 5 ? ? 0.059 'SIDE CHAIN' 5 1 DC A 6 ? ? 0.080 'SIDE CHAIN' 6 1 DT A 8 ? ? 0.084 'SIDE CHAIN' 7 1 DA A 9 ? ? 0.082 'SIDE CHAIN' 8 1 DC A 10 ? ? 0.078 'SIDE CHAIN' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 106 ? B HOH . 2 1 A HOH 122 ? B HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 395D _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 10 11_555 -0.246 -0.269 -0.426 -11.409 -4.951 -0.780 1 A_DG1:DC10_A A 1 ? A 10 ? 19 1 1 A DT 2 1_555 A DA 9 11_555 -0.314 -0.174 -0.072 -0.250 -8.360 6.379 2 A_DT2:DA9_A A 2 ? A 9 ? 20 1 1 A DA 3 1_555 A DT 8 11_555 -0.068 -0.239 0.039 2.124 -10.655 7.034 3 A_DA3:DT8_A A 3 ? A 8 ? 20 1 1 A DC 4 1_555 A DG 7 11_555 -0.080 -0.123 0.018 8.134 -10.847 0.062 4 A_DC4:DG7_A A 4 ? A 7 ? 19 1 1 A DG 5 1_555 A DC 6 11_555 -0.142 -0.315 0.059 -2.115 -15.177 -1.664 5 A_DG5:DC6_A A 5 ? A 6 ? 19 1 1 A DC 6 1_555 A DG 5 11_555 0.142 -0.315 0.059 2.115 -15.178 -1.664 6 A_DC6:DG5_A A 6 ? A 5 ? 19 1 1 A DG 7 1_555 A DC 4 11_555 0.080 -0.123 0.018 -8.134 -10.847 0.062 7 A_DG7:DC4_A A 7 ? A 4 ? 19 1 1 A DT 8 1_555 A DA 3 11_555 0.068 -0.239 0.039 -2.124 -10.655 7.034 8 A_DT8:DA3_A A 8 ? A 3 ? 20 1 1 A DA 9 1_555 A DT 2 11_555 0.314 -0.174 -0.072 0.250 -8.360 6.379 9 A_DA9:DT2_A A 9 ? A 2 ? 20 1 1 A DC 10 1_555 A DG 1 11_555 0.246 -0.269 -0.426 11.409 -4.951 -0.780 10 A_DC10:DG1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 10 11_555 A DT 2 1_555 A DA 9 11_555 0.129 -0.965 3.154 -1.108 5.721 30.504 -2.832 -0.440 2.923 10.749 2.082 31.043 1 AA_DG1DT2:DA9DC10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DT 2 1_555 A DA 9 11_555 A DA 3 1_555 A DT 8 11_555 0.128 -0.966 3.312 0.527 10.160 28.819 -3.784 -0.143 2.819 19.657 -1.019 30.527 2 AA_DT2DA3:DT8DA9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DA 3 1_555 A DT 8 11_555 A DC 4 1_555 A DG 7 11_555 -0.142 -1.210 3.229 -1.930 8.047 32.420 -3.362 -0.055 2.859 14.127 3.388 33.432 3 AA_DA3DC4:DG7DT8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DC 4 1_555 A DG 7 11_555 A DG 5 1_555 A DC 6 11_555 -0.680 -1.687 3.536 -2.484 12.902 29.657 -5.275 0.787 2.639 23.790 4.581 32.377 4 AA_DC4DG5:DC6DG7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DG 5 1_555 A DC 6 11_555 A DC 6 1_555 A DG 5 11_555 0.000 -1.589 3.085 0.000 14.496 34.362 -4.132 0.000 2.257 23.294 0.000 37.210 5 AA_DG5DC6:DG5DC6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DC 6 1_555 A DG 5 11_555 A DG 7 1_555 A DC 4 11_555 0.680 -1.687 3.536 2.484 12.902 29.657 -5.275 -0.787 2.639 23.790 -4.581 32.377 6 AA_DC6DG7:DC4DG5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DG 7 1_555 A DC 4 11_555 A DT 8 1_555 A DA 3 11_555 0.142 -1.210 3.229 1.930 8.047 32.420 -3.362 0.055 2.859 14.127 -3.388 33.432 7 AA_DG7DT8:DA3DC4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DT 8 1_555 A DA 3 11_555 A DA 9 1_555 A DT 2 11_555 -0.128 -0.966 3.312 -0.527 10.160 28.819 -3.784 0.143 2.819 19.657 1.019 30.527 8 AA_DT8DA9:DT2DA3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DA 9 1_555 A DT 2 11_555 A DC 10 1_555 A DG 1 11_555 -0.129 -0.965 3.154 1.108 5.721 30.504 -2.832 0.440 2.923 10.749 -2.082 31.043 9 AA_DA9DC10:DG1DT2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _atom_sites.entry_id 395D _atom_sites.fract_transf_matrix[1][1] 0.025471 _atom_sites.fract_transf_matrix[1][2] 0.014706 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029412 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012870 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? -8.971 20.162 16.628 1.00 50.39 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -8.853 18.802 16.162 1.00 40.91 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -8.166 18.700 14.841 1.00 39.07 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -8.971 19.346 13.831 1.00 34.99 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -6.792 19.312 14.763 1.00 36.19 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -5.732 18.496 15.307 1.00 39.11 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -6.694 19.346 13.287 1.00 34.37 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -8.048 19.788 12.821 1.00 33.47 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -8.107 21.250 12.665 1.00 29.04 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? -8.873 22.100 13.364 1.00 31.41 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? -9.010 23.290 12.898 1.00 32.09 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? -8.146 23.222 11.733 1.00 31.44 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? -7.813 24.208 10.800 1.00 30.02 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? -8.146 25.398 10.800 1.00 34.07 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? -7.028 23.732 9.790 1.00 24.76 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? -6.635 22.440 9.712 1.00 26.21 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? -5.830 22.134 8.702 1.00 22.46 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? -6.910 21.488 10.567 1.00 26.13 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? -7.695 21.964 11.577 1.00 30.45 ? 1 DG A C4 1 ATOM 20 P P . DT A 1 2 ? -4.456 19.142 16.006 1.00 39.51 ? 2 DT A P 1 ATOM 21 O OP1 . DT A 1 2 ? -3.671 18.122 16.705 1.00 48.49 ? 2 DT A OP1 1 ATOM 22 O OP2 . DT A 1 2 ? -5.045 20.298 16.783 1.00 38.47 ? 2 DT A OP2 1 ATOM 23 O "O5'" . DT A 1 2 ? -3.494 19.652 14.918 1.00 38.05 ? 2 DT A "O5'" 1 ATOM 24 C "C5'" . DT A 1 2 ? -2.827 18.632 14.141 1.00 36.47 ? 2 DT A "C5'" 1 ATOM 25 C "C4'" . DT A 1 2 ? -2.336 19.210 12.821 1.00 39.56 ? 2 DT A "C4'" 1 ATOM 26 O "O4'" . DT A 1 2 ? -3.416 19.856 12.199 1.00 35.81 ? 2 DT A "O4'" 1 ATOM 27 C "C3'" . DT A 1 2 ? -1.315 20.298 13.054 1.00 44.68 ? 2 DT A "C3'" 1 ATOM 28 O "O3'" . DT A 1 2 ? -0.020 19.754 13.364 1.00 50.78 ? 2 DT A "O3'" 1 ATOM 29 C "C2'" . DT A 1 2 ? -1.413 20.876 11.655 1.00 41.64 ? 2 DT A "C2'" 1 ATOM 30 C "C1'" . DT A 1 2 ? -2.886 20.978 11.422 1.00 37.04 ? 2 DT A "C1'" 1 ATOM 31 N N1 . DT A 1 2 ? -3.435 22.270 11.966 1.00 31.56 ? 2 DT A N1 1 ATOM 32 C C2 . DT A 1 2 ? -3.357 23.358 11.111 1.00 26.16 ? 2 DT A C2 1 ATOM 33 O O2 . DT A 1 2 ? -2.670 23.460 10.101 1.00 27.60 ? 2 DT A O2 1 ATOM 34 N N3 . DT A 1 2 ? -4.162 24.412 11.577 1.00 22.77 ? 2 DT A N3 1 ATOM 35 C C4 . DT A 1 2 ? -4.809 24.514 12.743 1.00 24.33 ? 2 DT A C4 1 ATOM 36 O O4 . DT A 1 2 ? -5.359 25.602 12.976 1.00 27.71 ? 2 DT A O4 1 ATOM 37 C C5 . DT A 1 2 ? -4.829 23.324 13.520 1.00 23.36 ? 2 DT A C5 1 ATOM 38 C C7 . DT A 1 2 ? -5.693 23.188 14.763 1.00 22.24 ? 2 DT A C7 1 ATOM 39 C C6 . DT A 1 2 ? -4.103 22.270 13.131 1.00 26.66 ? 2 DT A C6 1 ATOM 40 P P . DA A 1 3 ? 0.883 20.434 14.530 1.00 49.98 ? 3 DA A P 1 ATOM 41 O OP1 . DA A 1 3 ? 2.022 19.550 14.685 1.00 52.47 ? 3 DA A OP1 1 ATOM 42 O OP2 . DA A 1 3 ? 0.078 20.944 15.695 1.00 49.13 ? 3 DA A OP2 1 ATOM 43 O "O5'" . DA A 1 3 ? 1.433 21.726 13.675 1.00 45.38 ? 3 DA A "O5'" 1 ATOM 44 C "C5'" . DA A 1 3 ? 2.375 21.454 12.665 1.00 41.38 ? 3 DA A "C5'" 1 ATOM 45 C "C4'" . DA A 1 3 ? 2.473 22.644 11.810 1.00 40.42 ? 3 DA A "C4'" 1 ATOM 46 O "O4'" . DA A 1 3 ? 1.178 22.984 11.344 1.00 40.52 ? 3 DA A "O4'" 1 ATOM 47 C "C3'" . DA A 1 3 ? 3.023 23.868 12.432 1.00 42.10 ? 3 DA A "C3'" 1 ATOM 48 O "O3'" . DA A 1 3 ? 4.476 23.800 12.665 1.00 42.67 ? 3 DA A "O3'" 1 ATOM 49 C "C2'" . DA A 1 3 ? 2.591 24.820 11.344 1.00 37.04 ? 3 DA A "C2'" 1 ATOM 50 C "C1'" . DA A 1 3 ? 1.139 24.412 11.111 1.00 36.11 ? 3 DA A "C1'" 1 ATOM 51 N N9 . DA A 1 3 ? 0.157 25.092 12.043 1.00 27.15 ? 3 DA A N9 1 ATOM 52 C C8 . DA A 1 3 ? -0.393 24.616 13.209 1.00 23.10 ? 3 DA A C8 1 ATOM 53 N N7 . DA A 1 3 ? -1.296 25.364 13.753 1.00 23.09 ? 3 DA A N7 1 ATOM 54 C C5 . DA A 1 3 ? -1.335 26.452 12.821 1.00 18.55 ? 3 DA A C5 1 ATOM 55 C C6 . DA A 1 3 ? -2.061 27.642 12.821 1.00 17.20 ? 3 DA A C6 1 ATOM 56 N N6 . DA A 1 3 ? -3.043 27.846 13.675 1.00 18.21 ? 3 DA A N6 1 ATOM 57 N N1 . DA A 1 3 ? -1.865 28.526 11.888 1.00 17.93 ? 3 DA A N1 1 ATOM 58 C C2 . DA A 1 3 ? -0.903 28.288 11.033 1.00 21.27 ? 3 DA A C2 1 ATOM 59 N N3 . DA A 1 3 ? -0.118 27.200 10.878 1.00 24.89 ? 3 DA A N3 1 ATOM 60 C C4 . DA A 1 3 ? -0.432 26.316 11.888 1.00 19.07 ? 3 DA A C4 1 ATOM 61 P P . DC A 1 4 ? 5.222 24.412 13.908 1.00 45.15 ? 4 DC A P 1 ATOM 62 O OP1 . DC A 1 4 ? 6.615 23.970 14.064 1.00 48.52 ? 4 DC A OP1 1 ATOM 63 O OP2 . DC A 1 4 ? 4.319 24.344 15.151 1.00 40.56 ? 4 DC A OP2 1 ATOM 64 O "O5'" . DC A 1 4 ? 5.222 25.908 13.364 1.00 39.98 ? 4 DC A "O5'" 1 ATOM 65 C "C5'" . DC A 1 4 ? 6.007 26.316 12.277 1.00 35.40 ? 4 DC A "C5'" 1 ATOM 66 C "C4'" . DC A 1 4 ? 5.634 27.710 11.810 1.00 38.35 ? 4 DC A "C4'" 1 ATOM 67 O "O4'" . DC A 1 4 ? 4.240 27.744 11.422 1.00 36.16 ? 4 DC A "O4'" 1 ATOM 68 C "C3'" . DC A 1 4 ? 5.752 28.798 12.898 1.00 40.01 ? 4 DC A "C3'" 1 ATOM 69 O "O3'" . DC A 1 4 ? 7.086 29.342 12.976 1.00 41.56 ? 4 DC A "O3'" 1 ATOM 70 C "C2'" . DC A 1 4 ? 4.849 29.818 12.277 1.00 37.01 ? 4 DC A "C2'" 1 ATOM 71 C "C1'" . DC A 1 4 ? 3.690 28.968 11.810 1.00 34.59 ? 4 DC A "C1'" 1 ATOM 72 N N1 . DC A 1 4 ? 2.748 28.900 12.976 1.00 31.57 ? 4 DC A N1 1 ATOM 73 C C2 . DC A 1 4 ? 1.767 29.920 12.976 1.00 30.91 ? 4 DC A C2 1 ATOM 74 O O2 . DC A 1 4 ? 1.806 30.872 12.199 1.00 33.23 ? 4 DC A O2 1 ATOM 75 N N3 . DC A 1 4 ? 0.766 29.818 13.908 1.00 26.12 ? 4 DC A N3 1 ATOM 76 C C4 . DC A 1 4 ? 0.667 28.764 14.685 1.00 27.63 ? 4 DC A C4 1 ATOM 77 N N4 . DC A 1 4 ? -0.275 28.764 15.618 1.00 28.52 ? 4 DC A N4 1 ATOM 78 C C5 . DC A 1 4 ? 1.570 27.676 14.608 1.00 28.27 ? 4 DC A C5 1 ATOM 79 C C6 . DC A 1 4 ? 2.572 27.778 13.675 1.00 27.11 ? 4 DC A C6 1 ATOM 80 P P . DG A 1 5 ? 7.479 29.818 14.452 1.00 44.67 ? 5 DG A P 1 ATOM 81 O OP1 . DG A 1 5 ? 8.873 29.784 13.908 1.00 46.90 ? 5 DG A OP1 1 ATOM 82 O OP2 . DG A 1 5 ? 7.224 29.308 15.851 1.00 44.61 ? 5 DG A OP2 1 ATOM 83 O "O5'" . DG A 1 5 ? 6.910 31.348 14.374 1.00 45.12 ? 5 DG A "O5'" 1 ATOM 84 C "C5'" . DG A 1 5 ? 7.381 32.368 13.520 1.00 34.35 ? 5 DG A "C5'" 1 ATOM 85 C "C4'" . DG A 1 5 ? 6.655 33.626 13.753 1.00 28.86 ? 5 DG A "C4'" 1 ATOM 86 O "O4'" . DG A 1 5 ? 5.320 33.354 13.442 1.00 31.79 ? 5 DG A "O4'" 1 ATOM 87 C "C3'" . DG A 1 5 ? 6.596 34.068 15.151 1.00 27.42 ? 5 DG A "C3'" 1 ATOM 88 O "O3'" . DG A 1 5 ? 7.754 34.850 15.462 1.00 31.82 ? 5 DG A "O3'" 1 ATOM 89 C "C2'" . DG A 1 5 ? 5.379 34.952 15.151 1.00 27.43 ? 5 DG A "C2'" 1 ATOM 90 C "C1'" . DG A 1 5 ? 4.476 34.136 14.297 1.00 30.76 ? 5 DG A "C1'" 1 ATOM 91 N N9 . DG A 1 5 ? 3.612 33.252 15.074 1.00 28.65 ? 5 DG A N9 1 ATOM 92 C C8 . DG A 1 5 ? 3.789 31.926 15.385 1.00 26.08 ? 5 DG A C8 1 ATOM 93 N N7 . DG A 1 5 ? 2.886 31.450 16.162 1.00 25.15 ? 5 DG A N7 1 ATOM 94 C C5 . DG A 1 5 ? 2.022 32.538 16.395 1.00 26.10 ? 5 DG A C5 1 ATOM 95 C C6 . DG A 1 5 ? 0.824 32.640 17.172 1.00 24.19 ? 5 DG A C6 1 ATOM 96 O O6 . DG A 1 5 ? 0.236 31.756 17.793 1.00 26.94 ? 5 DG A O6 1 ATOM 97 N N1 . DG A 1 5 ? 0.393 33.932 17.249 1.00 23.54 ? 5 DG A N1 1 ATOM 98 C C2 . DG A 1 5 ? 0.883 34.986 16.550 1.00 20.21 ? 5 DG A C2 1 ATOM 99 N N2 . DG A 1 5 ? 0.353 36.176 16.705 1.00 26.28 ? 5 DG A N2 1 ATOM 100 N N3 . DG A 1 5 ? 1.924 34.884 15.695 1.00 24.04 ? 5 DG A N3 1 ATOM 101 C C4 . DG A 1 5 ? 2.473 33.660 15.695 1.00 28.04 ? 5 DG A C4 1 ATOM 102 P P . DC A 1 6 ? 8.362 34.748 16.939 1.00 40.01 ? 6 DC A P 1 ATOM 103 O OP1 . DC A 1 6 ? 9.481 35.530 16.395 1.00 48.36 ? 6 DC A OP1 1 ATOM 104 O OP2 . DC A 1 6 ? 8.598 33.592 17.871 1.00 43.23 ? 6 DC A OP2 1 ATOM 105 O "O5'" . DC A 1 6 ? 7.342 35.768 17.716 1.00 37.08 ? 6 DC A "O5'" 1 ATOM 106 C "C5'" . DC A 1 6 ? 7.224 37.128 17.482 1.00 30.86 ? 6 DC A "C5'" 1 ATOM 107 C "C4'" . DC A 1 6 ? 6.085 37.740 18.259 1.00 29.63 ? 6 DC A "C4'" 1 ATOM 108 O "O4'" . DC A 1 6 ? 4.829 37.196 17.871 1.00 27.69 ? 6 DC A "O4'" 1 ATOM 109 C "C3'" . DC A 1 6 ? 6.144 37.502 19.658 1.00 30.69 ? 6 DC A "C3'" 1 ATOM 110 O "O3'" . DC A 1 6 ? 7.106 38.352 20.280 1.00 39.69 ? 6 DC A "O3'" 1 ATOM 111 C "C2'" . DC A 1 6 ? 4.770 37.842 20.047 1.00 29.35 ? 6 DC A "C2'" 1 ATOM 112 C "C1'" . DC A 1 6 ? 3.946 37.162 19.036 1.00 27.38 ? 6 DC A "C1'" 1 ATOM 113 N N1 . DC A 1 6 ? 3.592 35.734 19.347 1.00 23.16 ? 6 DC A N1 1 ATOM 114 C C2 . DC A 1 6 ? 2.356 35.564 19.969 1.00 23.88 ? 6 DC A C2 1 ATOM 115 O O2 . DC A 1 6 ? 1.649 36.516 20.280 1.00 28.97 ? 6 DC A O2 1 ATOM 116 N N3 . DC A 1 6 ? 1.924 34.272 20.124 1.00 24.99 ? 6 DC A N3 1 ATOM 117 C C4 . DC A 1 6 ? 2.689 33.218 19.813 1.00 25.88 ? 6 DC A C4 1 ATOM 118 N N4 . DC A 1 6 ? 2.336 31.994 20.280 1.00 26.51 ? 6 DC A N4 1 ATOM 119 C C5 . DC A 1 6 ? 3.906 33.422 19.114 1.00 21.03 ? 6 DC A C5 1 ATOM 120 C C6 . DC A 1 6 ? 4.240 34.680 18.803 1.00 23.91 ? 6 DC A C6 1 ATOM 121 P P . DG A 1 7 ? 7.793 37.978 21.678 1.00 44.42 ? 7 DG A P 1 ATOM 122 O OP1 . DG A 1 7 ? 8.676 39.168 21.601 1.00 50.74 ? 7 DG A OP1 1 ATOM 123 O OP2 . DG A 1 7 ? 8.402 36.584 21.678 1.00 49.43 ? 7 DG A OP2 1 ATOM 124 O "O5'" . DG A 1 7 ? 6.556 38.148 22.611 1.00 35.43 ? 7 DG A "O5'" 1 ATOM 125 C "C5'" . DG A 1 7 ? 6.478 37.536 23.932 1.00 30.65 ? 7 DG A "C5'" 1 ATOM 126 C "C4'" . DG A 1 7 ? 5.123 37.842 24.398 1.00 31.73 ? 7 DG A "C4'" 1 ATOM 127 O "O4'" . DG A 1 7 ? 4.142 37.366 23.465 1.00 32.68 ? 7 DG A "O4'" 1 ATOM 128 C "C3'" . DG A 1 7 ? 4.829 37.128 25.719 1.00 34.28 ? 7 DG A "C3'" 1 ATOM 129 O "O3'" . DG A 1 7 ? 5.300 37.944 26.806 1.00 39.89 ? 7 DG A "O3'" 1 ATOM 130 C "C2'" . DG A 1 7 ? 3.337 36.924 25.641 1.00 29.04 ? 7 DG A "C2'" 1 ATOM 131 C "C1'" . DG A 1 7 ? 3.141 36.584 24.165 1.00 26.63 ? 7 DG A "C1'" 1 ATOM 132 N N9 . DG A 1 7 ? 3.337 35.156 23.854 1.00 23.36 ? 7 DG A N9 1 ATOM 133 C C8 . DG A 1 7 ? 4.240 34.612 22.921 1.00 20.66 ? 7 DG A C8 1 ATOM 134 N N7 . DG A 1 7 ? 4.044 33.320 22.766 1.00 22.44 ? 7 DG A N7 1 ATOM 135 C C5 . DG A 1 7 ? 2.886 33.014 23.465 1.00 22.19 ? 7 DG A C5 1 ATOM 136 C C6 . DG A 1 7 ? 2.218 31.790 23.698 1.00 25.31 ? 7 DG A C6 1 ATOM 137 O O6 . DG A 1 7 ? 2.434 30.668 23.232 1.00 28.06 ? 7 DG A O6 1 ATOM 138 N N1 . DG A 1 7 ? 1.099 31.960 24.475 1.00 22.53 ? 7 DG A N1 1 ATOM 139 C C2 . DG A 1 7 ? 0.726 33.150 25.175 1.00 22.57 ? 7 DG A C2 1 ATOM 140 N N2 . DG A 1 7 ? -0.314 33.116 25.952 1.00 24.96 ? 7 DG A N2 1 ATOM 141 N N3 . DG A 1 7 ? 1.335 34.272 24.942 1.00 19.40 ? 7 DG A N3 1 ATOM 142 C C4 . DG A 1 7 ? 2.414 34.170 24.165 1.00 23.30 ? 7 DG A C4 1 ATOM 143 P P . DT A 1 8 ? 6.046 37.196 27.972 1.00 36.29 ? 8 DT A P 1 ATOM 144 O OP1 . DT A 1 8 ? 6.380 38.318 28.904 1.00 38.51 ? 8 DT A OP1 1 ATOM 145 O OP2 . DT A 1 8 ? 7.086 36.346 27.350 1.00 36.15 ? 8 DT A OP2 1 ATOM 146 O "O5'" . DT A 1 8 ? 4.868 36.312 28.516 1.00 33.69 ? 8 DT A "O5'" 1 ATOM 147 C "C5'" . DT A 1 8 ? 3.906 36.958 29.371 1.00 33.34 ? 8 DT A "C5'" 1 ATOM 148 C "C4'" . DT A 1 8 ? 2.925 35.938 29.837 1.00 32.08 ? 8 DT A "C4'" 1 ATOM 149 O "O4'" . DT A 1 8 ? 2.414 35.258 28.671 1.00 35.28 ? 8 DT A "O4'" 1 ATOM 150 C "C3'" . DT A 1 8 ? 3.533 34.884 30.614 1.00 37.78 ? 8 DT A "C3'" 1 ATOM 151 O "O3'" . DT A 1 8 ? 3.749 35.394 31.935 1.00 45.16 ? 8 DT A "O3'" 1 ATOM 152 C "C2'" . DT A 1 8 ? 2.434 33.864 30.536 1.00 34.20 ? 8 DT A "C2'" 1 ATOM 153 C "C1'" . DT A 1 8 ? 2.100 33.898 29.060 1.00 33.03 ? 8 DT A "C1'" 1 ATOM 154 N N1 . DT A 1 8 ? 2.925 32.946 28.361 1.00 28.56 ? 8 DT A N1 1 ATOM 155 C C2 . DT A 1 8 ? 2.336 31.722 28.127 1.00 29.39 ? 8 DT A C2 1 ATOM 156 O O2 . DT A 1 8 ? 1.296 31.348 28.671 1.00 32.81 ? 8 DT A O2 1 ATOM 157 N N3 . DT A 1 8 ? 3.003 30.906 27.195 1.00 25.77 ? 8 DT A N3 1 ATOM 158 C C4 . DT A 1 8 ? 4.122 31.280 26.496 1.00 27.63 ? 8 DT A C4 1 ATOM 159 O O4 . DT A 1 8 ? 4.574 30.498 25.641 1.00 33.47 ? 8 DT A O4 1 ATOM 160 C C5 . DT A 1 8 ? 4.633 32.572 26.729 1.00 24.94 ? 8 DT A C5 1 ATOM 161 C C7 . DT A 1 8 ? 5.771 33.116 25.952 1.00 26.59 ? 8 DT A C7 1 ATOM 162 C C6 . DT A 1 8 ? 4.063 33.354 27.661 1.00 26.01 ? 8 DT A C6 1 ATOM 163 P P . DA A 1 9 ? 4.574 34.578 33.022 1.00 52.38 ? 9 DA A P 1 ATOM 164 O OP1 . DA A 1 9 ? 4.122 35.428 34.110 1.00 51.32 ? 9 DA A OP1 1 ATOM 165 O OP2 . DA A 1 9 ? 6.026 34.578 32.556 1.00 52.46 ? 9 DA A OP2 1 ATOM 166 O "O5'" . DA A 1 9 ? 4.063 33.082 33.333 1.00 47.26 ? 9 DA A "O5'" 1 ATOM 167 C "C5'" . DA A 1 9 ? 2.905 32.912 34.110 1.00 43.35 ? 9 DA A "C5'" 1 ATOM 168 C "C4'" . DA A 1 9 ? 2.454 31.518 33.955 1.00 44.44 ? 9 DA A "C4'" 1 ATOM 169 O "O4'" . DA A 1 9 ? 2.375 31.246 32.556 1.00 46.53 ? 9 DA A "O4'" 1 ATOM 170 C "C3'" . DA A 1 9 ? 3.494 30.532 34.421 1.00 46.24 ? 9 DA A "C3'" 1 ATOM 171 O "O3'" . DA A 1 9 ? 3.474 30.362 35.820 1.00 50.65 ? 9 DA A "O3'" 1 ATOM 172 C "C2'" . DA A 1 9 ? 3.023 29.308 33.644 1.00 44.36 ? 9 DA A "C2'" 1 ATOM 173 C "C1'" . DA A 1 9 ? 2.591 29.852 32.323 1.00 39.21 ? 9 DA A "C1'" 1 ATOM 174 N N9 . DA A 1 9 ? 3.690 29.648 31.391 1.00 32.40 ? 9 DA A N9 1 ATOM 175 C C8 . DA A 1 9 ? 4.593 30.532 30.925 1.00 28.60 ? 9 DA A C8 1 ATOM 176 N N7 . DA A 1 9 ? 5.123 30.158 29.759 1.00 30.10 ? 9 DA A N7 1 ATOM 177 C C5 . DA A 1 9 ? 4.554 28.900 29.526 1.00 29.55 ? 9 DA A C5 1 ATOM 178 C C6 . DA A 1 9 ? 4.829 27.880 28.594 1.00 29.35 ? 9 DA A C6 1 ATOM 179 N N6 . DA A 1 9 ? 5.693 28.016 27.661 1.00 30.14 ? 9 DA A N6 1 ATOM 180 N N1 . DA A 1 9 ? 4.162 26.724 28.749 1.00 31.22 ? 9 DA A N1 1 ATOM 181 C C2 . DA A 1 9 ? 3.239 26.622 29.681 1.00 30.10 ? 9 DA A C2 1 ATOM 182 N N3 . DA A 1 9 ? 2.886 27.506 30.614 1.00 31.51 ? 9 DA A N3 1 ATOM 183 C C4 . DA A 1 9 ? 3.651 28.628 30.536 1.00 28.52 ? 9 DA A C4 1 ATOM 184 P P . DC A 1 10 ? 4.829 29.920 36.597 1.00 52.35 ? 10 DC A P 1 ATOM 185 O OP1 . DC A 1 10 ? 4.476 30.328 37.995 1.00 48.18 ? 10 DC A OP1 1 ATOM 186 O OP2 . DC A 1 10 ? 6.066 30.430 35.975 1.00 47.85 ? 10 DC A OP2 1 ATOM 187 O "O5'" . DC A 1 10 ? 4.888 28.322 36.519 1.00 43.81 ? 10 DC A "O5'" 1 ATOM 188 C "C5'" . DC A 1 10 ? 3.867 27.438 36.985 1.00 37.44 ? 10 DC A "C5'" 1 ATOM 189 C "C4'" . DC A 1 10 ? 4.083 26.044 36.364 1.00 37.92 ? 10 DC A "C4'" 1 ATOM 190 O "O4'" . DC A 1 10 ? 3.847 26.044 34.965 1.00 34.75 ? 10 DC A "O4'" 1 ATOM 191 C "C3'" . DC A 1 10 ? 5.536 25.772 36.597 1.00 34.99 ? 10 DC A "C3'" 1 ATOM 192 O "O3'" . DC A 1 10 ? 5.693 25.092 37.840 1.00 36.51 ? 10 DC A "O3'" 1 ATOM 193 C "C2'" . DC A 1 10 ? 5.928 24.956 35.431 1.00 30.80 ? 10 DC A "C2'" 1 ATOM 194 C "C1'" . DC A 1 10 ? 4.888 25.262 34.343 1.00 32.41 ? 10 DC A "C1'" 1 ATOM 195 N N1 . DC A 1 10 ? 5.496 25.908 33.178 1.00 26.25 ? 10 DC A N1 1 ATOM 196 C C2 . DC A 1 10 ? 5.614 25.160 32.012 1.00 26.24 ? 10 DC A C2 1 ATOM 197 O O2 . DC A 1 10 ? 5.065 24.072 31.857 1.00 33.82 ? 10 DC A O2 1 ATOM 198 N N3 . DC A 1 10 ? 6.340 25.602 31.002 1.00 22.22 ? 10 DC A N3 1 ATOM 199 C C4 . DC A 1 10 ? 6.910 26.792 31.080 1.00 23.40 ? 10 DC A C4 1 ATOM 200 N N4 . DC A 1 10 ? 7.656 27.200 30.070 1.00 21.38 ? 10 DC A N4 1 ATOM 201 C C5 . DC A 1 10 ? 6.772 27.642 32.245 1.00 22.41 ? 10 DC A C5 1 ATOM 202 C C6 . DC A 1 10 ? 6.026 27.166 33.256 1.00 21.14 ? 10 DC A C6 1 HETATM 203 O O . HOH B 2 . ? 3.612 29.185 17.579 1.00 42.65 ? 101 HOH A O 1 HETATM 204 O O . HOH B 2 . ? 7.144 31.164 18.233 1.00 47.06 ? 102 HOH A O 1 HETATM 205 O O . HOH B 2 . ? -4.941 19.345 8.432 1.00 44.64 ? 103 HOH A O 1 HETATM 206 O O . HOH B 2 . ? 5.383 29.917 19.573 1.00 45.39 ? 104 HOH A O 1 HETATM 207 O O . HOH B 2 . ? 5.754 31.546 22.088 1.00 48.05 ? 105 HOH A O 1 HETATM 208 O O . HOH B 2 . ? -2.093 23.817 32.296 0.5 48.90 ? 106 HOH A O 1 HETATM 209 O O . HOH B 2 . ? 7.074 34.271 20.641 1.00 49.98 ? 107 HOH A O 1 HETATM 210 O O . HOH B 2 . ? 2.983 32.838 10.514 1.00 52.06 ? 108 HOH A O 1 HETATM 211 O O . HOH B 2 . ? 3.248 33.744 40.106 1.00 53.41 ? 109 HOH A O 1 HETATM 212 O O . HOH B 2 . ? -0.222 20.910 9.054 1.00 53.49 ? 110 HOH A O 1 HETATM 213 O O . HOH B 2 . ? -0.799 31.911 30.878 1.00 54.45 ? 111 HOH A O 1 HETATM 214 O O . HOH B 2 . ? -1.602 16.222 15.832 1.00 52.36 ? 112 HOH A O 1 HETATM 215 O O . HOH B 2 . ? -1.989 22.326 16.653 1.00 52.66 ? 113 HOH A O 1 HETATM 216 O O . HOH B 2 . ? 4.744 27.303 16.458 1.00 53.32 ? 114 HOH A O 1 HETATM 217 O O . HOH B 2 . ? -0.974 21.192 17.938 1.00 55.04 ? 115 HOH A O 1 HETATM 218 O O . HOH B 2 . ? -1.052 33.559 32.721 1.00 55.46 ? 116 HOH A O 1 HETATM 219 O O . HOH B 2 . ? 7.577 26.744 39.218 1.00 55.71 ? 117 HOH A O 1 HETATM 220 O O . HOH B 2 . ? 4.319 22.142 18.687 1.00 67.62 ? 118 HOH A O 1 HETATM 221 O O . HOH B 2 . ? -4.208 17.874 10.592 1.00 61.62 ? 119 HOH A O 1 HETATM 222 O O . HOH B 2 . ? 1.733 27.314 8.905 1.00 62.08 ? 120 HOH A O 1 HETATM 223 O O . HOH B 2 . ? -10.514 25.485 13.304 1.00 63.50 ? 121 HOH A O 1 HETATM 224 O O . HOH B 2 . ? 0.001 29.535 19.422 0.5 64.12 ? 122 HOH A O 1 HETATM 225 O O . HOH B 2 . ? -3.049 25.123 15.670 1.00 65.32 ? 123 HOH A O 1 HETATM 226 O O . HOH B 2 . ? 6.930 34.346 36.378 1.00 65.33 ? 124 HOH A O 1 HETATM 227 O O . HOH B 2 . ? 2.771 16.248 16.846 1.00 68.86 ? 125 HOH A O 1 HETATM 228 O O . HOH B 2 . ? 12.045 34.720 14.850 1.00 71.11 ? 126 HOH A O 1 HETATM 229 O O . HOH B 2 . ? 9.642 30.004 17.488 1.00 73.16 ? 127 HOH A O 1 HETATM 230 O O . HOH B 2 . ? -0.194 26.725 16.734 1.00 74.77 ? 128 HOH A O 1 HETATM 231 O O . HOH B 2 . ? 4.066 29.167 22.241 1.00 75.95 ? 129 HOH A O 1 HETATM 232 O O . HOH B 2 . ? 0.980 29.113 37.955 1.00 79.12 ? 130 HOH A O 1 HETATM 233 O O . HOH B 2 . ? 7.019 30.353 9.155 1.00 80.17 ? 131 HOH A O 1 HETATM 234 O O . HOH B 2 . ? 10.739 32.280 16.103 1.00 83.58 ? 132 HOH A O 1 HETATM 235 O O . HOH B 2 . ? -1.355 24.680 7.474 1.00 87.27 ? 133 HOH A O 1 HETATM 236 O O . HOH B 2 . ? 8.650 33.487 23.051 1.00 87.66 ? 134 HOH A O 1 HETATM 237 O O . HOH B 2 . ? 7.664 36.930 31.623 1.00 81.97 ? 135 HOH A O 1 HETATM 238 O O . HOH B 2 . ? 7.842 26.563 17.206 1.00 82.89 ? 136 HOH A O 1 HETATM 239 O O . HOH B 2 . ? 5.148 20.095 16.969 1.00 83.78 ? 137 HOH A O 1 HETATM 240 O O . HOH B 2 . ? 12.670 35.167 12.870 1.00 83.79 ? 138 HOH A O 1 HETATM 241 O O . HOH B 2 . ? -2.931 30.354 30.009 1.00 85.21 ? 139 HOH A O 1 HETATM 242 O O . HOH B 2 . ? 7.264 31.282 29.403 1.00 87.52 ? 140 HOH A O 1 #