data_3GVN # _entry.id 3GVN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GVN pdb_00003gvn 10.2210/pdb3gvn/pdb NDB AR0105 ? ? RCSB RCSB052363 ? ? WWPDB D_1000052363 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2V6W 'tRNASer isoacceptor' unspecified PDB 1SER 'tRNASer isoacceptor complexed with corresponding Aminoacyl-tRNA-Synthetase' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GVN _pdbx_database_status.recvd_initial_deposition_date 2009-03-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eichert, A.' 1 'Furste, J.P.' 2 'Schreiber, A.' 3 'Perbandt, M.' 4 'Betzel, C.' 5 'Erdmann, V.A.' 6 'Forster, C.' 7 # _citation.id primary _citation.title 'The 1.2A crystal structure of an E. coli tRNASer)acceptor stem microhelix reveals two magnesium binding sites.' _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 386 _citation.page_first 368 _citation.page_last 373 _citation.year 2009 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19527687 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2009.06.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Eichert, A.' 1 ? primary 'Furste, J.P.' 2 ? primary 'Schreiber, A.' 3 ? primary 'Perbandt, M.' 4 ? primary 'Betzel, C.' 5 ? primary 'Erdmann, V.A.' 6 ? primary 'Forster, C.' 7 ? # _cell.entry_id 3GVN _cell.length_a 35.793 _cell.length_b 39.126 _cell.length_c 31.367 _cell.angle_alpha 90.00 _cell.angle_beta 111.08 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GVN _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*GP*UP*GP*AP*GP*G)-3'" 2316.443 1 ? ? ? ? 2 polymer syn "5'-R(*CP*CP*UP*CP*AP*CP*C)-3'" 2116.323 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 97 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'tRNASer acceptor stem microhelix (RS-1661)' 2 'tRNASer acceptor stem microhelix (RS-1661)' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGUGAGG GGUGAGG A ? 2 polyribonucleotide no no CCUCACC CCUCACC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 G n 1 5 A n 1 6 G n 1 7 G n 2 1 C n 2 2 C n 2 3 U n 2 4 C n 2 5 A n 2 6 C n 2 7 C n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'This sequence occurs naturally in E.coli.' 2 1 sample ? ? ? ? ? 'This sequence occurs naturally in E.coli.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 3GVN 3GVN 1 ? ? ? 2 PDB 3GVN 3GVN 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GVN A 1 ? 7 ? 3GVN 1 ? 7 ? 1 7 2 2 3GVN B 1 ? 7 ? 3GVN 66 ? 72 ? 66 72 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3GVN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details ;10% (v/v) MPD, 40mM sodium cacodylate, 20mM cobalt hexamine, 80mM sodium chloride, 20mM magnesium chloride, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-11-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3GVN _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 120 _reflns.d_resolution_high 1.2 _reflns.number_obs 12806 _reflns.number_all ? _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.22 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.154 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 8.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 8814 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GVN _refine.ls_number_reflns_obs 12806 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 120 _refine.ls_d_res_high 1.2 _refine.ls_percent_reflns_obs 99.2 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.190 _refine.ls_R_factor_R_free 0.201 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 4550 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2v6w _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 293 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 392 _refine_hist.d_res_high 1.2 _refine_hist.d_res_low 120 # _struct.entry_id 3GVN _struct.title 'The 1.2 Angstroem crystal structure of an E.coli tRNASer acceptor stem microhelix reveals two magnesium binding sites' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GVN _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'tRNASer/Seryl-tRNA-synthetase, tRNA acceptor stem microhelix, identity elements, RNA hydration, magnesium binding sites, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 8 A HOH 12 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 8 A HOH 14 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 8 A HOH 77 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 8 A HOH 94 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 8 A HOH 96 1_555 ? ? ? ? ? ? ? 2.103 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 9 A HOH 15 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 9 A HOH 16 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 9 A HOH 21 1_555 ? ? ? ? ? ? ? 2.101 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 2 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 2 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 2 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 B A 5 N1 ? ? A U 3 B A 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 B A 5 N6 ? ? A U 3 B A 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 4 N3 ? ? A G 4 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 4 O2 ? ? A G 4 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 4 N4 ? ? A G 4 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 B U 3 N3 ? ? A A 5 B U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 B U 3 O4 ? ? A A 5 B U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 6 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 B C 2 O2 ? ? A G 6 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 B C 2 N4 ? ? A G 6 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 B C 1 N3 ? ? A G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 N2 ? ? ? 1_555 B C 1 O2 ? ? A G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 O6 ? ? ? 1_555 B C 1 N4 ? ? A G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 8 ? 5 'BINDING SITE FOR RESIDUE MG A 8' AC2 Software A MG 9 ? 7 'BINDING SITE FOR RESIDUE MG A 9' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HOH E . ? HOH A 12 . ? 1_555 ? 2 AC1 5 HOH E . ? HOH A 14 . ? 1_555 ? 3 AC1 5 HOH E . ? HOH A 77 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 94 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 96 . ? 1_555 ? 6 AC2 7 HOH E . ? HOH A 15 . ? 1_555 ? 7 AC2 7 HOH E . ? HOH A 16 . ? 1_555 ? 8 AC2 7 HOH E . ? HOH A 21 . ? 1_555 ? 9 AC2 7 HOH E . ? HOH A 40 . ? 4_545 ? 10 AC2 7 HOH F . ? HOH B 2 . ? 2_655 ? 11 AC2 7 HOH F . ? HOH B 46 . ? 2_655 ? 12 AC2 7 A B 5 ? A B 70 . ? 2_655 ? # _database_PDB_matrix.entry_id 3GVN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GVN _atom_sites.fract_transf_matrix[1][1] 0.027938 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010769 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025558 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.034167 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . G A 1 1 ? 5.604 2.541 15.080 1.00 20.05 ? 1 G A "O5'" 1 ATOM 2 C "C5'" . G A 1 1 ? 5.019 3.736 15.574 1.00 17.11 ? 1 G A "C5'" 1 ATOM 3 C "C4'" . G A 1 1 ? 6.002 4.878 15.440 1.00 11.68 ? 1 G A "C4'" 1 ATOM 4 O "O4'" . G A 1 1 ? 7.257 4.582 16.092 1.00 11.43 ? 1 G A "O4'" 1 ATOM 5 C "C3'" . G A 1 1 ? 6.379 5.228 13.997 1.00 10.92 ? 1 G A "C3'" 1 ATOM 6 O "O3'" . G A 1 1 ? 5.284 5.980 13.458 1.00 10.87 ? 1 G A "O3'" 1 ATOM 7 C "C2'" . G A 1 1 ? 7.636 6.036 14.262 1.00 9.02 ? 1 G A "C2'" 1 ATOM 8 O "O2'" . G A 1 1 ? 7.295 7.251 14.856 1.00 10.11 ? 1 G A "O2'" 1 ATOM 9 C "C1'" . G A 1 1 ? 8.303 5.108 15.293 1.00 10.17 ? 1 G A "C1'" 1 ATOM 10 N N9 . G A 1 1 ? 9.087 4.053 14.709 1.00 9.15 ? 1 G A N9 1 ATOM 11 C C8 . G A 1 1 ? 8.942 2.732 14.742 1.00 11.78 ? 1 G A C8 1 ATOM 12 N N7 . G A 1 1 ? 9.884 2.067 14.068 1.00 13.85 ? 1 G A N7 1 ATOM 13 C C5 . G A 1 1 ? 10.795 3.120 13.598 1.00 10.90 ? 1 G A C5 1 ATOM 14 C C6 . G A 1 1 ? 11.912 3.044 12.749 1.00 11.57 ? 1 G A C6 1 ATOM 15 O O6 . G A 1 1 ? 12.470 1.979 12.403 1.00 14.43 ? 1 G A O6 1 ATOM 16 N N1 . G A 1 1 ? 12.495 4.288 12.441 1.00 11.77 ? 1 G A N1 1 ATOM 17 C C2 . G A 1 1 ? 11.847 5.449 12.912 1.00 11.12 ? 1 G A C2 1 ATOM 18 N N2 . G A 1 1 ? 12.516 6.549 12.484 1.00 8.33 ? 1 G A N2 1 ATOM 19 N N3 . G A 1 1 ? 10.705 5.545 13.770 1.00 9.12 ? 1 G A N3 1 ATOM 20 C C4 . G A 1 1 ? 10.249 4.327 13.987 1.00 8.95 ? 1 G A C4 1 ATOM 21 P P . G A 1 2 ? 5.100 6.114 11.859 1.00 10.87 ? 2 G A P 1 ATOM 22 O OP1 . G A 1 2 ? 3.858 6.826 11.647 1.00 12.48 ? 2 G A OP1 1 ATOM 23 O OP2 . G A 1 2 ? 5.269 4.798 11.272 1.00 11.76 ? 2 G A OP2 1 ATOM 24 O "O5'" . G A 1 2 ? 6.343 6.996 11.382 1.00 9.03 ? 2 G A "O5'" 1 ATOM 25 C "C5'" . G A 1 2 ? 6.470 8.353 11.809 1.00 9.97 ? 2 G A "C5'" 1 ATOM 26 C "C4'" . G A 1 2 ? 7.818 8.832 11.301 1.00 8.88 ? 2 G A "C4'" 1 ATOM 27 O "O4'" . G A 1 2 ? 8.909 8.044 11.723 1.00 8.36 ? 2 G A "O4'" 1 ATOM 28 C "C3'" . G A 1 2 ? 7.897 8.888 9.751 1.00 8.39 ? 2 G A "C3'" 1 ATOM 29 O "O3'" . G A 1 2 ? 7.297 10.055 9.291 1.00 9.26 ? 2 G A "O3'" 1 ATOM 30 C "C2'" . G A 1 2 ? 9.422 8.901 9.564 1.00 8.35 ? 2 G A "C2'" 1 ATOM 31 O "O2'" . G A 1 2 ? 9.939 10.173 9.726 1.00 10.64 ? 2 G A "O2'" 1 ATOM 32 C "C1'" . G A 1 2 ? 9.838 7.945 10.656 1.00 8.27 ? 2 G A "C1'" 1 ATOM 33 N N9 . G A 1 2 ? 10.001 6.554 10.275 1.00 6.68 ? 2 G A N9 1 ATOM 34 C C8 . G A 1 2 ? 9.237 5.493 10.683 1.00 7.68 ? 2 G A C8 1 ATOM 35 N N7 . G A 1 2 ? 9.702 4.283 10.318 1.00 10.48 ? 2 G A N7 1 ATOM 36 C C5 . G A 1 2 ? 10.950 4.646 9.527 1.00 9.68 ? 2 G A C5 1 ATOM 37 C C6 . G A 1 2 ? 11.903 3.808 8.847 1.00 10.76 ? 2 G A C6 1 ATOM 38 O O6 . G A 1 2 ? 11.896 2.547 8.791 1.00 12.55 ? 2 G A O6 1 ATOM 39 N N1 . G A 1 2 ? 12.927 4.570 8.197 1.00 12.43 ? 2 G A N1 1 ATOM 40 C C2 . G A 1 2 ? 12.923 5.971 8.291 1.00 10.57 ? 2 G A C2 1 ATOM 41 N N2 . G A 1 2 ? 13.928 6.465 7.536 1.00 8.10 ? 2 G A N2 1 ATOM 42 N N3 . G A 1 2 ? 12.007 6.836 9.025 1.00 7.98 ? 2 G A N3 1 ATOM 43 C C4 . G A 1 2 ? 11.073 6.090 9.592 1.00 7.75 ? 2 G A C4 1 ATOM 44 P P . U A 1 3 ? 6.570 10.122 7.967 1.00 9.63 ? 3 U A P 1 ATOM 45 O OP1 . U A 1 3 ? 6.120 11.522 7.867 1.00 11.20 ? 3 U A OP1 1 ATOM 46 O OP2 . U A 1 3 ? 5.715 9.020 7.827 1.00 8.47 ? 3 U A OP2 1 ATOM 47 O "O5'" . U A 1 3 ? 7.653 9.765 6.807 1.00 7.83 ? 3 U A "O5'" 1 ATOM 48 C "C5'" . U A 1 3 ? 8.522 10.855 6.474 1.00 7.80 ? 3 U A "C5'" 1 ATOM 49 C "C4'" . U A 1 3 ? 9.433 10.346 5.438 1.00 6.99 ? 3 U A "C4'" 1 ATOM 50 O "O4'" . U A 1 3 ? 10.371 9.412 5.972 1.00 6.45 ? 3 U A "O4'" 1 ATOM 51 C "C3'" . U A 1 3 ? 8.873 9.579 4.233 1.00 5.53 ? 3 U A "C3'" 1 ATOM 52 O "O3'" . U A 1 3 ? 8.158 10.405 3.376 1.00 6.12 ? 3 U A "O3'" 1 ATOM 53 C "C2'" . U A 1 3 ? 10.142 8.909 3.685 1.00 6.28 ? 3 U A "C2'" 1 ATOM 54 O "O2'" . U A 1 3 ? 10.880 9.858 2.960 1.00 7.48 ? 3 U A "O2'" 1 ATOM 55 C "C1'" . U A 1 3 ? 10.842 8.548 4.991 1.00 5.88 ? 3 U A "C1'" 1 ATOM 56 N N1 . U A 1 3 ? 10.595 7.166 5.422 1.00 5.93 ? 3 U A N1 1 ATOM 57 C C2 . U A 1 3 ? 11.423 6.163 4.878 1.00 5.82 ? 3 U A C2 1 ATOM 58 O O2 . U A 1 3 ? 12.293 6.442 4.078 1.00 6.49 ? 3 U A O2 1 ATOM 59 N N3 . U A 1 3 ? 11.212 4.886 5.323 1.00 6.37 ? 3 U A N3 1 ATOM 60 C C4 . U A 1 3 ? 10.222 4.525 6.200 1.00 6.32 ? 3 U A C4 1 ATOM 61 O O4 . U A 1 3 ? 10.118 3.350 6.513 1.00 6.70 ? 3 U A O4 1 ATOM 62 C C5 . U A 1 3 ? 9.364 5.582 6.661 1.00 6.65 ? 3 U A C5 1 ATOM 63 C C6 . U A 1 3 ? 9.559 6.834 6.264 1.00 6.58 ? 3 U A C6 1 ATOM 64 P P . G A 1 4 ? 7.084 9.772 2.413 1.00 6.63 ? 4 G A P 1 ATOM 65 O OP1 . G A 1 4 ? 6.478 10.903 1.645 1.00 6.82 ? 4 G A OP1 1 ATOM 66 O OP2 . G A 1 4 ? 6.193 8.881 3.173 1.00 7.60 ? 4 G A OP2 1 ATOM 67 O "O5'" . G A 1 4 ? 8.008 8.909 1.461 1.00 6.32 ? 4 G A "O5'" 1 ATOM 68 C "C5'" . G A 1 4 ? 7.633 7.682 0.873 1.00 6.20 ? 4 G A "C5'" 1 ATOM 69 C "C4'" . G A 1 4 ? 8.858 7.035 0.319 1.00 6.63 ? 4 G A "C4'" 1 ATOM 70 O "O4'" . G A 1 4 ? 9.717 6.606 1.420 1.00 6.93 ? 4 G A "O4'" 1 ATOM 71 C "C3'" . G A 1 4 ? 8.655 5.753 -0.456 1.00 6.92 ? 4 G A "C3'" 1 ATOM 72 O "O3'" . G A 1 4 ? 8.257 6.081 -1.808 1.00 6.27 ? 4 G A "O3'" 1 ATOM 73 C "C2'" . G A 1 4 ? 10.027 5.063 -0.320 1.00 7.37 ? 4 G A "C2'" 1 ATOM 74 O "O2'" . G A 1 4 ? 10.905 5.753 -1.161 1.00 7.64 ? 4 G A "O2'" 1 ATOM 75 C "C1'" . G A 1 4 ? 10.365 5.367 1.143 1.00 6.51 ? 4 G A "C1'" 1 ATOM 76 N N9 . G A 1 4 ? 9.794 4.354 2.020 1.00 6.88 ? 4 G A N9 1 ATOM 77 C C8 . G A 1 4 ? 8.734 4.566 2.905 1.00 7.69 ? 4 G A C8 1 ATOM 78 N N7 . G A 1 4 ? 8.456 3.441 3.597 1.00 9.43 ? 4 G A N7 1 ATOM 79 C C5 . G A 1 4 ? 9.436 2.425 3.049 1.00 9.39 ? 4 G A C5 1 ATOM 80 C C6 . G A 1 4 ? 9.586 1.089 3.253 1.00 9.50 ? 4 G A C6 1 ATOM 81 O O6 . G A 1 4 ? 8.910 0.454 4.053 1.00 11.56 ? 4 G A O6 1 ATOM 82 N N1 . G A 1 4 ? 10.603 0.580 2.493 1.00 9.13 ? 4 G A N1 1 ATOM 83 C C2 . G A 1 4 ? 11.373 1.249 1.539 1.00 8.00 ? 4 G A C2 1 ATOM 84 N N2 . G A 1 4 ? 12.312 0.419 0.928 1.00 5.88 ? 4 G A N2 1 ATOM 85 N N3 . G A 1 4 ? 11.285 2.666 1.309 1.00 5.64 ? 4 G A N3 1 ATOM 86 C C4 . G A 1 4 ? 10.254 3.092 2.041 1.00 6.63 ? 4 G A C4 1 ATOM 87 P P . A A 1 5 ? 7.438 5.005 -2.675 1.00 6.93 ? 5 A A P 1 ATOM 88 O OP1 . A A 1 5 ? 6.984 5.770 -3.871 1.00 8.57 ? 5 A A OP1 1 ATOM 89 O OP2 . A A 1 5 ? 6.455 4.284 -1.868 1.00 7.61 ? 5 A A OP2 1 ATOM 90 O "O5'" . A A 1 5 ? 8.543 3.903 -3.102 1.00 6.47 ? 5 A A "O5'" 1 ATOM 91 C "C5'" . A A 1 5 ? 9.586 4.227 -3.951 1.00 5.90 ? 5 A A "C5'" 1 ATOM 92 C "C4'" . A A 1 5 ? 10.430 3.002 -4.225 1.00 5.67 ? 5 A A "C4'" 1 ATOM 93 O "O4'" . A A 1 5 ? 11.058 2.526 -3.006 1.00 6.22 ? 5 A A "O4'" 1 ATOM 94 C "C3'" . A A 1 5 ? 9.726 1.770 -4.764 1.00 5.58 ? 5 A A "C3'" 1 ATOM 95 O "O3'" . A A 1 5 ? 9.518 1.899 -6.137 1.00 5.32 ? 5 A A "O3'" 1 ATOM 96 C "C2'" . A A 1 5 ? 10.677 0.672 -4.355 1.00 5.75 ? 5 A A "C2'" 1 ATOM 97 O "O2'" . A A 1 5 ? 11.795 0.739 -5.240 1.00 6.88 ? 5 A A "O2'" 1 ATOM 98 C "C1'" . A A 1 5 ? 11.079 1.099 -2.958 1.00 5.63 ? 5 A A "C1'" 1 ATOM 99 N N9 . A A 1 5 ? 10.107 0.702 -1.959 1.00 5.09 ? 5 A A N9 1 ATOM 100 C C8 . A A 1 5 ? 9.225 1.522 -1.320 1.00 6.40 ? 5 A A C8 1 ATOM 101 N N7 . A A 1 5 ? 8.537 0.962 -0.367 1.00 5.57 ? 5 A A N7 1 ATOM 102 C C5 . A A 1 5 ? 8.973 -0.362 -0.404 1.00 4.57 ? 5 A A C5 1 ATOM 103 C C6 . A A 1 5 ? 8.653 -1.431 0.428 1.00 4.91 ? 5 A A C6 1 ATOM 104 N N6 . A A 1 5 ? 7.798 -1.368 1.428 1.00 5.81 ? 5 A A N6 1 ATOM 105 N N1 . A A 1 5 ? 9.251 -2.607 0.141 1.00 4.68 ? 5 A A N1 1 ATOM 106 C C2 . A A 1 5 ? 10.141 -2.679 -0.872 1.00 4.80 ? 5 A A C2 1 ATOM 107 N N3 . A A 1 5 ? 10.563 -1.678 -1.637 1.00 4.80 ? 5 A A N3 1 ATOM 108 C C4 . A A 1 5 ? 9.936 -0.517 -1.330 1.00 4.23 ? 5 A A C4 1 ATOM 109 P P . G A 1 6 ? 8.197 1.269 -6.803 1.00 7.12 ? 6 G A P 1 ATOM 110 O OP1 . G A 1 6 ? 8.181 1.687 -8.237 1.00 9.24 ? 6 G A OP1 1 ATOM 111 O OP2 . G A 1 6 ? 7.018 1.532 -5.949 1.00 8.20 ? 6 G A OP2 1 ATOM 112 O "O5'" . G A 1 6 ? 8.401 -0.300 -6.713 1.00 6.89 ? 6 G A "O5'" 1 ATOM 113 C "C5'" . G A 1 6 ? 9.479 -0.954 -7.464 1.00 7.47 ? 6 G A "C5'" 1 ATOM 114 C "C4'" . G A 1 6 ? 9.589 -2.361 -6.991 1.00 6.37 ? 6 G A "C4'" 1 ATOM 115 O "O4'" . G A 1 6 ? 9.975 -2.392 -5.580 1.00 6.18 ? 6 G A "O4'" 1 ATOM 116 C "C3'" . G A 1 6 ? 8.350 -3.224 -7.050 1.00 6.65 ? 6 G A "C3'" 1 ATOM 117 O "O3'" . G A 1 6 ? 8.143 -3.711 -8.388 1.00 7.69 ? 6 G A "O3'" 1 ATOM 118 C "C2'" . G A 1 6 ? 8.702 -4.333 -6.077 1.00 6.56 ? 6 G A "C2'" 1 ATOM 119 O "O2'" . G A 1 6 ? 9.732 -5.208 -6.586 1.00 8.25 ? 6 G A "O2'" 1 ATOM 120 C "C1'" . G A 1 6 ? 9.327 -3.489 -4.963 1.00 6.13 ? 6 G A "C1'" 1 ATOM 121 N N9 . G A 1 6 ? 8.338 -3.015 -4.031 1.00 5.69 ? 6 G A N9 1 ATOM 122 C C8 . G A 1 6 ? 7.851 -1.757 -3.930 1.00 6.69 ? 6 G A C8 1 ATOM 123 N N7 . G A 1 6 ? 6.920 -1.540 -2.975 1.00 7.96 ? 6 G A N7 1 ATOM 124 C C5 . G A 1 6 ? 6.865 -2.939 -2.306 1.00 7.91 ? 6 G A C5 1 ATOM 125 C C6 . G A 1 6 ? 6.059 -3.454 -1.348 1.00 9.61 ? 6 G A C6 1 ATOM 126 O O6 . G A 1 6 ? 5.294 -2.729 -0.661 1.00 10.86 ? 6 G A O6 1 ATOM 127 N N1 . G A 1 6 ? 6.297 -4.830 -1.097 1.00 10.87 ? 6 G A N1 1 ATOM 128 C C2 . G A 1 6 ? 7.134 -5.579 -1.897 1.00 8.39 ? 6 G A C2 1 ATOM 129 N N2 . G A 1 6 ? 7.151 -6.951 -1.602 1.00 6.98 ? 6 G A N2 1 ATOM 130 N N3 . G A 1 6 ? 8.025 -5.060 -2.910 1.00 6.23 ? 6 G A N3 1 ATOM 131 C C4 . G A 1 6 ? 7.756 -3.782 -3.070 1.00 6.15 ? 6 G A C4 1 ATOM 132 P P . G A 1 7 ? 6.644 -3.863 -8.908 1.00 8.97 ? 7 G A P 1 ATOM 133 O OP1 . G A 1 7 ? 6.762 -4.291 -10.290 1.00 12.17 ? 7 G A OP1 1 ATOM 134 O OP2 . G A 1 7 ? 5.923 -2.633 -8.575 1.00 11.27 ? 7 G A OP2 1 ATOM 135 O "O5'" . G A 1 7 ? 6.000 -5.023 -8.023 1.00 7.95 ? 7 G A "O5'" 1 ATOM 136 C "C5'" . G A 1 7 ? 6.529 -6.386 -8.154 1.00 8.33 ? 7 G A "C5'" 1 ATOM 137 C "C4'" . G A 1 7 ? 5.860 -7.281 -7.133 1.00 7.61 ? 7 G A "C4'" 1 ATOM 138 O "O4'" . G A 1 7 ? 6.204 -6.845 -5.808 1.00 7.93 ? 7 G A "O4'" 1 ATOM 139 C "C3'" . G A 1 7 ? 4.334 -7.273 -7.133 1.00 7.31 ? 7 G A "C3'" 1 ATOM 140 O "O3'" . G A 1 7 ? 3.775 -8.112 -8.116 1.00 8.41 ? 7 G A "O3'" 1 ATOM 141 C "C2'" . G A 1 7 ? 4.041 -7.825 -5.706 1.00 7.73 ? 7 G A "C2'" 1 ATOM 142 O "O2'" . G A 1 7 ? 4.250 -9.212 -5.657 1.00 8.72 ? 7 G A "O2'" 1 ATOM 143 C "C1'" . G A 1 7 ? 5.151 -7.120 -4.890 1.00 7.64 ? 7 G A "C1'" 1 ATOM 144 N N9 . G A 1 7 ? 4.622 -5.882 -4.356 1.00 6.88 ? 7 G A N9 1 ATOM 145 C C8 . G A 1 7 ? 4.703 -4.615 -4.909 1.00 7.01 ? 7 G A C8 1 ATOM 146 N N7 . G A 1 7 ? 4.001 -3.663 -4.144 1.00 9.52 ? 7 G A N7 1 ATOM 147 C C5 . G A 1 7 ? 3.487 -4.494 -2.971 1.00 7.77 ? 7 G A C5 1 ATOM 148 C C6 . G A 1 7 ? 2.664 -4.061 -1.869 1.00 10.38 ? 7 G A C6 1 ATOM 149 O O6 . G A 1 7 ? 2.292 -2.892 -1.651 1.00 10.77 ? 7 G A O6 1 ATOM 150 N N1 . G A 1 7 ? 2.317 -5.113 -0.966 1.00 10.62 ? 7 G A N1 1 ATOM 151 C C2 . G A 1 7 ? 2.746 -6.418 -1.275 1.00 10.27 ? 7 G A C2 1 ATOM 152 N N2 . G A 1 7 ? 2.282 -7.347 -0.358 1.00 8.85 ? 7 G A N2 1 ATOM 153 N N3 . G A 1 7 ? 3.577 -6.853 -2.421 1.00 8.44 ? 7 G A N3 1 ATOM 154 C C4 . G A 1 7 ? 3.881 -5.819 -3.161 1.00 7.73 ? 7 G A C4 1 ATOM 155 O "O5'" . C B 2 1 ? -0.148 -4.079 7.109 1.00 17.23 ? 66 C B "O5'" 1 ATOM 156 C "C5'" . C B 2 1 ? -0.802 -5.274 7.466 1.00 13.07 ? 66 C B "C5'" 1 ATOM 157 C "C4'" . C B 2 1 ? -0.698 -6.390 6.466 1.00 11.36 ? 66 C B "C4'" 1 ATOM 158 O "O4'" . C B 2 1 ? -1.297 -5.902 5.210 1.00 10.49 ? 66 C B "O4'" 1 ATOM 159 C "C3'" . C B 2 1 ? 0.712 -6.747 6.086 1.00 11.07 ? 66 C B "C3'" 1 ATOM 160 O "O3'" . C B 2 1 ? 1.202 -7.709 7.046 1.00 10.49 ? 66 C B "O3'" 1 ATOM 161 C "C2'" . C B 2 1 ? 0.493 -7.382 4.736 1.00 10.84 ? 66 C B "C2'" 1 ATOM 162 O "O2'" . C B 2 1 ? -0.144 -8.651 4.892 1.00 12.17 ? 66 C B "O2'" 1 ATOM 163 C "C1'" . C B 2 1 ? -0.519 -6.414 4.159 1.00 10.64 ? 66 C B "C1'" 1 ATOM 164 N N1 . C B 2 1 ? 0.050 -5.273 3.379 1.00 8.59 ? 66 C B N1 1 ATOM 165 C C2 . C B 2 1 ? 0.606 -5.569 2.132 1.00 8.33 ? 66 C B C2 1 ATOM 166 O O2 . C B 2 1 ? 0.672 -6.690 1.720 1.00 11.06 ? 66 C B O2 1 ATOM 167 N N3 . C B 2 1 ? 1.014 -4.480 1.464 1.00 8.43 ? 66 C B N3 1 ATOM 168 C C4 . C B 2 1 ? 0.920 -3.276 1.892 1.00 11.57 ? 66 C B C4 1 ATOM 169 N N4 . C B 2 1 ? 1.370 -2.264 1.092 1.00 11.46 ? 66 C B N4 1 ATOM 170 C C5 . C B 2 1 ? 0.453 -2.974 3.138 1.00 12.44 ? 66 C B C5 1 ATOM 171 C C6 . C B 2 1 ? -0.010 -4.006 3.847 1.00 10.88 ? 66 C B C6 1 ATOM 172 P P . C B 2 2 ? 2.771 -7.923 7.292 1.00 9.86 ? 67 C B P 1 ATOM 173 O OP1 . C B 2 2 ? 2.891 -8.853 8.431 1.00 11.28 ? 67 C B OP1 1 ATOM 174 O OP2 . C B 2 2 ? 3.321 -6.614 7.406 1.00 11.23 ? 67 C B OP2 1 ATOM 175 O "O5'" . C B 2 2 ? 3.365 -8.629 5.981 1.00 9.12 ? 67 C B "O5'" 1 ATOM 176 C "C5'" . C B 2 2 ? 3.213 -10.050 5.719 1.00 10.33 ? 67 C B "C5'" 1 ATOM 177 C "C4'" . C B 2 2 ? 3.927 -10.347 4.454 1.00 8.48 ? 67 C B "C4'" 1 ATOM 178 O "O4'" . C B 2 2 ? 3.298 -9.662 3.338 1.00 9.39 ? 67 C B "O4'" 1 ATOM 179 C "C3'" . C B 2 2 ? 5.346 -9.874 4.401 1.00 7.89 ? 67 C B "C3'" 1 ATOM 180 O "O3'" . C B 2 2 ? 6.137 -10.784 5.158 1.00 8.71 ? 67 C B "O3'" 1 ATOM 181 C "C2'" . C B 2 2 ? 5.606 -9.943 2.898 1.00 8.77 ? 67 C B "C2'" 1 ATOM 182 O "O2'" . C B 2 2 ? 5.744 -11.297 2.414 1.00 9.43 ? 67 C B "O2'" 1 ATOM 183 C "C1'" . C B 2 2 ? 4.323 -9.286 2.420 1.00 8.57 ? 67 C B "C1'" 1 ATOM 184 N N1 . C B 2 2 ? 4.395 -7.832 2.351 1.00 8.23 ? 67 C B N1 1 ATOM 185 C C2 . C B 2 2 ? 4.984 -7.178 1.268 1.00 7.58 ? 67 C B C2 1 ATOM 186 O O2 . C B 2 2 ? 5.507 -7.898 0.376 1.00 8.03 ? 67 C B O2 1 ATOM 187 N N3 . C B 2 2 ? 4.914 -5.753 1.202 1.00 8.45 ? 67 C B N3 1 ATOM 188 C C4 . C B 2 2 ? 4.381 -4.937 2.020 1.00 9.31 ? 67 C B C4 1 ATOM 189 N N4 . C B 2 2 ? 4.320 -3.602 1.812 1.00 10.90 ? 67 C B N4 1 ATOM 190 C C5 . C B 2 2 ? 3.919 -5.631 3.158 1.00 8.81 ? 67 C B C5 1 ATOM 191 C C6 . C B 2 2 ? 3.892 -6.976 3.272 1.00 8.07 ? 67 C B C6 1 ATOM 192 P P . U B 2 3 ? 7.468 -10.347 5.893 1.00 8.09 ? 68 U B P 1 ATOM 193 O OP1 . U B 2 3 ? 7.960 -11.533 6.581 1.00 10.54 ? 68 U B OP1 1 ATOM 194 O OP2 . U B 2 3 ? 7.220 -9.202 6.618 1.00 7.23 ? 68 U B OP2 1 ATOM 195 O "O5'" . U B 2 3 ? 8.482 -9.942 4.721 1.00 6.45 ? 68 U B "O5'" 1 ATOM 196 C "C5'" . U B 2 3 ? 9.060 -10.990 3.933 1.00 7.81 ? 68 U B "C5'" 1 ATOM 197 C "C4'" . U B 2 3 ? 9.792 -10.297 2.789 1.00 6.32 ? 68 U B "C4'" 1 ATOM 198 O "O4'" . U B 2 3 ? 8.856 -9.597 1.929 1.00 6.26 ? 68 U B "O4'" 1 ATOM 199 C "C3'" . U B 2 3 ? 10.789 -9.208 3.114 1.00 6.03 ? 68 U B "C3'" 1 ATOM 200 O "O3'" . U B 2 3 ? 11.985 -9.775 3.653 1.00 6.74 ? 68 U B "O3'" 1 ATOM 201 C "C2'" . U B 2 3 ? 10.951 -8.524 1.813 1.00 5.27 ? 68 U B "C2'" 1 ATOM 202 O "O2'" . U B 2 3 ? 11.718 -9.332 0.940 1.00 6.03 ? 68 U B "O2'" 1 ATOM 203 C "C1'" . U B 2 3 ? 9.483 -8.489 1.340 1.00 5.02 ? 68 U B "C1'" 1 ATOM 204 N N1 . U B 2 3 ? 8.838 -7.226 1.818 1.00 4.79 ? 68 U B N1 1 ATOM 205 C C2 . U B 2 3 ? 9.157 -6.066 1.117 1.00 4.67 ? 68 U B C2 1 ATOM 206 O O2 . U B 2 3 ? 9.864 -6.101 0.158 1.00 5.34 ? 68 U B O2 1 ATOM 207 N N3 . U B 2 3 ? 8.566 -4.915 1.564 1.00 4.56 ? 68 U B N3 1 ATOM 208 C C4 . U B 2 3 ? 7.803 -4.817 2.709 1.00 5.17 ? 68 U B C4 1 ATOM 209 O O4 . U B 2 3 ? 7.403 -3.703 3.026 1.00 7.13 ? 68 U B O4 1 ATOM 210 C C5 . U B 2 3 ? 7.602 -6.051 3.452 1.00 5.84 ? 68 U B C5 1 ATOM 211 C C6 . U B 2 3 ? 8.130 -7.168 3.005 1.00 5.36 ? 68 U B C6 1 ATOM 212 P P . C B 2 4 ? 12.904 -8.930 4.654 1.00 7.31 ? 69 C B P 1 ATOM 213 O OP1 . C B 2 4 ? 13.967 -9.852 5.078 1.00 9.81 ? 69 C B OP1 1 ATOM 214 O OP2 . C B 2 4 ? 12.083 -8.286 5.674 1.00 9.29 ? 69 C B OP2 1 ATOM 215 O "O5'" . C B 2 4 ? 13.494 -7.707 3.806 1.00 6.26 ? 69 C B "O5'" 1 ATOM 216 C "C5'" . C B 2 4 ? 14.364 -7.984 2.687 1.00 5.91 ? 69 C B "C5'" 1 ATOM 217 C "C4'" . C B 2 4 ? 14.545 -6.737 1.903 1.00 5.35 ? 69 C B "C4'" 1 ATOM 218 O "O4'" . C B 2 4 ? 13.267 -6.280 1.406 1.00 5.48 ? 69 C B "O4'" 1 ATOM 219 C "C3'" . C B 2 4 ? 15.122 -5.540 2.582 1.00 4.93 ? 69 C B "C3'" 1 ATOM 220 O "O3'" . C B 2 4 ? 16.509 -5.712 2.732 1.00 5.59 ? 69 C B "O3'" 1 ATOM 221 C "C2'" . C B 2 4 ? 14.713 -4.407 1.629 1.00 5.33 ? 69 C B "C2'" 1 ATOM 222 O "O2'" . C B 2 4 ? 15.529 -4.472 0.463 1.00 6.13 ? 69 C B "O2'" 1 ATOM 223 C "C1'" . C B 2 4 ? 13.271 -4.851 1.300 1.00 5.13 ? 69 C B "C1'" 1 ATOM 224 N N1 . C B 2 4 ? 12.315 -4.296 2.265 1.00 5.02 ? 69 C B N1 1 ATOM 225 C C2 . C B 2 4 ? 11.978 -2.931 2.134 1.00 5.66 ? 69 C B C2 1 ATOM 226 O O2 . C B 2 4 ? 12.493 -2.224 1.269 1.00 5.88 ? 69 C B O2 1 ATOM 227 N N3 . C B 2 4 ? 11.038 -2.342 3.006 1.00 8.56 ? 69 C B N3 1 ATOM 228 C C4 . C B 2 4 ? 10.475 -2.972 3.919 1.00 8.93 ? 69 C B C4 1 ATOM 229 N N4 . C B 2 4 ? 9.605 -2.225 4.717 1.00 13.90 ? 69 C B N4 1 ATOM 230 C C5 . C B 2 4 ? 10.889 -4.253 4.023 1.00 4.97 ? 69 C B C5 1 ATOM 231 C C6 . C B 2 4 ? 11.723 -4.945 3.252 1.00 5.39 ? 69 C B C6 1 ATOM 232 P P . A B 2 5 ? 17.330 -4.823 3.795 1.00 6.09 ? 70 A B P 1 ATOM 233 O OP1 . A B 2 5 ? 18.667 -5.362 3.834 1.00 7.68 ? 70 A B OP1 1 ATOM 234 O OP2 . A B 2 5 ? 16.514 -4.692 5.047 1.00 7.21 ? 70 A B OP2 1 ATOM 235 O "O5'" . A B 2 5 ? 17.349 -3.347 3.186 1.00 5.61 ? 70 A B "O5'" 1 ATOM 236 C "C5'" . A B 2 5 ? 18.219 -3.029 2.091 1.00 5.51 ? 70 A B "C5'" 1 ATOM 237 C "C4'" . A B 2 5 ? 18.182 -1.556 1.828 1.00 5.66 ? 70 A B "C4'" 1 ATOM 238 O "O4'" . A B 2 5 ? 16.839 -1.159 1.459 1.00 5.53 ? 70 A B "O4'" 1 ATOM 239 C "C3'" . A B 2 5 ? 18.465 -0.673 3.066 1.00 5.12 ? 70 A B "C3'" 1 ATOM 240 O "O3'" . A B 2 5 ? 19.844 -0.674 3.317 1.00 5.78 ? 70 A B "O3'" 1 ATOM 241 C "C2'" . A B 2 5 ? 17.863 0.651 2.567 1.00 5.05 ? 70 A B "C2'" 1 ATOM 242 O "O2'" . A B 2 5 ? 18.759 1.213 1.626 1.00 6.60 ? 70 A B "O2'" 1 ATOM 243 C "C1'" . A B 2 5 ? 16.589 0.173 1.919 1.00 5.74 ? 70 A B "C1'" 1 ATOM 244 N N9 . A B 2 5 ? 15.477 0.117 2.900 1.00 5.00 ? 70 A B N9 1 ATOM 245 C C8 . A B 2 5 ? 15.041 -1.001 3.566 1.00 5.62 ? 70 A B C8 1 ATOM 246 N N7 . A B 2 5 ? 14.005 -0.691 4.352 1.00 5.40 ? 70 A B N7 1 ATOM 247 C C5 . A B 2 5 ? 13.756 0.660 4.178 1.00 5.18 ? 70 A B C5 1 ATOM 248 C C6 . A B 2 5 ? 12.840 1.559 4.729 1.00 5.93 ? 70 A B C6 1 ATOM 249 N N6 . A B 2 5 ? 11.877 1.201 5.622 1.00 6.58 ? 70 A B N6 1 ATOM 250 N N1 . A B 2 5 ? 12.913 2.834 4.317 1.00 5.74 ? 70 A B N1 1 ATOM 251 C C2 . A B 2 5 ? 13.830 3.167 3.444 1.00 6.07 ? 70 A B C2 1 ATOM 252 N N3 . A B 2 5 ? 14.774 2.432 2.878 1.00 5.53 ? 70 A B N3 1 ATOM 253 C C4 . A B 2 5 ? 14.661 1.166 3.285 1.00 5.06 ? 70 A B C4 1 ATOM 254 P P . C B 2 6 ? 20.417 -0.506 4.804 1.00 5.90 ? 71 C B P 1 ATOM 255 O OP1 . C B 2 6 ? 21.895 -0.785 4.715 1.00 6.76 ? 71 C B OP1 1 ATOM 256 O OP2 . C B 2 6 ? 19.601 -1.284 5.740 1.00 7.50 ? 71 C B OP2 1 ATOM 257 O "O5'" . C B 2 6 ? 20.169 0.999 5.184 1.00 5.88 ? 71 C B "O5'" 1 ATOM 258 C "C5'" . C B 2 6 ? 20.843 2.047 4.444 1.00 6.35 ? 71 C B "C5'" 1 ATOM 259 C "C4'" . C B 2 6 ? 20.123 3.351 4.630 1.00 5.85 ? 71 C B "C4'" 1 ATOM 260 O "O4'" . C B 2 6 ? 18.721 3.229 4.218 1.00 6.81 ? 71 C B "O4'" 1 ATOM 261 C "C3'" . C B 2 6 ? 19.964 3.862 6.076 1.00 5.59 ? 71 C B "C3'" 1 ATOM 262 O "O3'" . C B 2 6 ? 21.184 4.419 6.502 1.00 6.38 ? 71 C B "O3'" 1 ATOM 263 C "C2'" . C B 2 6 ? 18.810 4.837 5.936 1.00 6.20 ? 71 C B "C2'" 1 ATOM 264 O "O2'" . C B 2 6 ? 19.285 6.030 5.365 1.00 7.06 ? 71 C B "O2'" 1 ATOM 265 C "C1'" . C B 2 6 ? 17.913 4.069 4.991 1.00 6.48 ? 71 C B "C1'" 1 ATOM 266 N N1 . C B 2 6 ? 16.974 3.194 5.768 1.00 6.41 ? 71 C B N1 1 ATOM 267 C C2 . C B 2 6 ? 15.815 3.784 6.305 1.00 7.52 ? 71 C B C2 1 ATOM 268 O O2 . C B 2 6 ? 15.598 4.997 6.167 1.00 8.88 ? 71 C B O2 1 ATOM 269 N N3 . C B 2 6 ? 14.981 2.990 7.003 1.00 9.22 ? 71 C B N3 1 ATOM 270 C C4 . C B 2 6 ? 15.156 1.739 7.182 1.00 9.06 ? 71 C B C4 1 ATOM 271 N N4 . C B 2 6 ? 14.268 1.005 7.850 1.00 9.56 ? 71 C B N4 1 ATOM 272 C C5 . C B 2 6 ? 16.261 1.195 6.741 1.00 7.75 ? 71 C B C5 1 ATOM 273 C C6 . C B 2 6 ? 17.133 1.897 6.034 1.00 6.27 ? 71 C B C6 1 ATOM 274 P P . C B 2 7 ? 21.596 4.425 8.050 1.00 6.87 ? 72 C B P 1 ATOM 275 O OP1 . C B 2 7 ? 22.891 5.056 8.115 1.00 8.71 ? 72 C B OP1 1 ATOM 276 O OP2 . C B 2 7 ? 21.417 3.082 8.592 1.00 7.61 ? 72 C B OP2 1 ATOM 277 O "O5'" . C B 2 7 ? 20.493 5.322 8.760 1.00 6.14 ? 72 C B "O5'" 1 ATOM 278 C "C5'" . C B 2 7 ? 20.469 6.724 8.415 1.00 7.50 ? 72 C B "C5'" 1 ATOM 279 C "C4'" . C B 2 7 ? 19.271 7.374 9.096 1.00 8.21 ? 72 C B "C4'" 1 ATOM 280 O "O4'" . C B 2 7 ? 18.049 6.776 8.649 1.00 7.09 ? 72 C B "O4'" 1 ATOM 281 C "C3'" . C B 2 7 ? 19.206 7.183 10.631 1.00 8.65 ? 72 C B "C3'" 1 ATOM 282 O "O3'" . C B 2 7 ? 20.075 8.044 11.332 1.00 9.77 ? 72 C B "O3'" 1 ATOM 283 C "C2'" . C B 2 7 ? 17.731 7.491 10.888 1.00 7.89 ? 72 C B "C2'" 1 ATOM 284 O "O2'" . C B 2 7 ? 17.497 8.862 10.933 1.00 10.07 ? 72 C B "O2'" 1 ATOM 285 C "C1'" . C B 2 7 ? 17.084 6.853 9.686 1.00 7.68 ? 72 C B "C1'" 1 ATOM 286 N N1 . C B 2 7 ? 16.615 5.509 9.956 1.00 6.03 ? 72 C B N1 1 ATOM 287 C C2 . C B 2 7 ? 15.406 5.404 10.629 1.00 7.25 ? 72 C B C2 1 ATOM 288 O O2 . C B 2 7 ? 14.761 6.393 10.983 1.00 9.82 ? 72 C B O2 1 ATOM 289 N N3 . C B 2 7 ? 14.928 4.205 10.929 1.00 9.38 ? 72 C B N3 1 ATOM 290 C C4 . C B 2 7 ? 15.544 3.137 10.628 1.00 9.37 ? 72 C B C4 1 ATOM 291 N N4 . C B 2 7 ? 14.996 1.949 11.028 1.00 11.50 ? 72 C B N4 1 ATOM 292 C C5 . C B 2 7 ? 16.776 3.215 10.044 1.00 7.74 ? 72 C B C5 1 ATOM 293 C C6 . C B 2 7 ? 17.309 4.364 9.701 1.00 6.86 ? 72 C B C6 1 HETATM 294 MG MG . MG C 3 . ? 3.837 1.023 -2.174 1.00 6.34 ? 8 MG A MG 1 HETATM 295 MG MG . MG D 3 . ? 13.994 -5.577 -5.686 1.00 3.21 ? 9 MG A MG 1 HETATM 296 O O . HOH E 4 . ? 5.860 0.360 2.844 1.00 17.51 ? 10 HOH A O 1 HETATM 297 O O . HOH E 4 . ? 15.772 9.367 0.556 1.00 20.83 ? 11 HOH A O 1 HETATM 298 O O . HOH E 4 . ? 4.577 0.141 -0.496 1.00 16.77 ? 12 HOH A O 1 HETATM 299 O O . HOH E 4 . ? 5.430 4.686 2.071 1.00 18.88 ? 13 HOH A O 1 HETATM 300 O O . HOH E 4 . ? 3.876 -0.740 -3.219 1.00 18.36 ? 14 HOH A O 1 HETATM 301 O O . HOH E 4 . ? 14.268 -5.146 -3.609 1.00 14.22 ? 15 HOH A O 1 HETATM 302 O O . HOH E 4 . ? 12.671 -3.998 -5.965 1.00 15.85 ? 16 HOH A O 1 HETATM 303 O O . HOH E 4 . ? 14.185 0.763 -1.172 1.00 10.50 ? 17 HOH A O 1 HETATM 304 O O . HOH E 4 . ? 4.424 9.748 5.275 1.00 13.16 ? 18 HOH A O 1 HETATM 305 O O . HOH E 4 . ? 10.899 -5.943 -2.739 1.00 9.24 ? 19 HOH A O 1 HETATM 306 O O . HOH E 4 . ? 6.580 6.423 4.291 1.00 10.46 ? 20 HOH A O 1 HETATM 307 O O . HOH E 4 . ? 13.847 -6.105 -7.714 1.00 16.66 ? 21 HOH A O 1 HETATM 308 O O . HOH E 4 . ? 15.480 8.927 7.051 1.00 13.79 ? 22 HOH A O 1 HETATM 309 O O . HOH E 4 . ? 12.720 9.532 9.596 1.00 11.22 ? 23 HOH A O 1 HETATM 310 O O . HOH E 4 . ? 11.618 9.176 13.386 1.00 11.15 ? 24 HOH A O 1 HETATM 311 O O . HOH E 4 . ? 12.822 5.808 -3.528 1.00 13.45 ? 25 HOH A O 1 HETATM 312 O O . HOH E 4 . ? 3.943 11.814 2.532 1.00 17.56 ? 26 HOH A O 1 HETATM 313 O O . HOH E 4 . ? 0.773 0.012 -4.957 1.00 20.87 ? 27 HOH A O 1 HETATM 314 O O . HOH E 4 . ? 11.061 0.271 10.004 1.00 33.52 ? 30 HOH A O 1 HETATM 315 O O . HOH E 4 . ? 12.790 -2.555 -3.108 1.00 8.10 ? 34 HOH A O 1 HETATM 316 O O . HOH E 4 . ? 11.885 11.345 11.818 1.00 32.81 ? 36 HOH A O 1 HETATM 317 O O . HOH E 4 . ? 12.321 1.287 -7.998 1.00 13.31 ? 37 HOH A O 1 HETATM 318 O O . HOH E 4 . ? 11.687 8.973 0.274 1.00 10.84 ? 38 HOH A O 1 HETATM 319 O O . HOH E 4 . ? 3.436 8.306 9.376 1.00 27.70 ? 39 HOH A O 1 HETATM 320 O O . HOH E 4 . ? 5.535 12.753 5.222 1.00 14.72 ? 40 HOH A O 1 HETATM 321 O O . HOH E 4 . ? 6.465 2.508 0.664 1.00 20.43 ? 41 HOH A O 1 HETATM 322 O O . HOH E 4 . ? 6.007 6.453 6.986 1.00 17.31 ? 42 HOH A O 1 HETATM 323 O O . HOH E 4 . ? 10.221 -6.012 -9.092 1.00 15.12 ? 45 HOH A O 1 HETATM 324 O O . HOH E 4 . ? 7.729 6.253 -6.460 1.00 19.27 ? 47 HOH A O 1 HETATM 325 O O . HOH E 4 . ? 2.079 -2.418 -6.031 1.00 25.87 ? 50 HOH A O 1 HETATM 326 O O . HOH E 4 . ? 7.869 2.429 7.876 1.00 15.32 ? 51 HOH A O 1 HETATM 327 O O . HOH E 4 . ? 6.742 -0.160 -9.790 1.00 20.83 ? 57 HOH A O 1 HETATM 328 O O . HOH E 4 . ? 4.837 5.784 -0.167 1.00 20.65 ? 60 HOH A O 1 HETATM 329 O O . HOH E 4 . ? 14.289 -0.044 -11.748 1.00 40.62 ? 66 HOH A O 1 HETATM 330 O O . HOH E 4 . ? 4.439 0.550 -6.162 1.00 20.55 ? 68 HOH A O 1 HETATM 331 O O . HOH E 4 . ? 12.929 3.703 -0.646 1.00 21.97 ? 71 HOH A O 1 HETATM 332 O O . HOH E 4 . ? 10.978 -1.567 12.146 1.00 23.75 ? 73 HOH A O 1 HETATM 333 O O . HOH E 4 . ? 2.701 5.060 -2.924 1.00 26.68 ? 74 HOH A O 1 HETATM 334 O O . HOH E 4 . ? 3.065 2.106 -3.805 1.00 17.00 ? 77 HOH A O 1 HETATM 335 O O . HOH E 4 . ? 4.523 2.595 12.382 1.00 31.03 ? 81 HOH A O 1 HETATM 336 O O . HOH E 4 . ? 5.500 3.783 -5.396 1.00 22.13 ? 82 HOH A O 1 HETATM 337 O O . HOH E 4 . ? 9.128 12.358 11.169 1.00 19.40 ? 83 HOH A O 1 HETATM 338 O O . HOH E 4 . ? 3.793 7.987 2.127 1.00 28.18 ? 84 HOH A O 1 HETATM 339 O O . HOH E 4 . ? 13.511 7.299 1.430 1.00 24.10 ? 85 HOH A O 1 HETATM 340 O O . HOH E 4 . ? 6.113 4.466 8.660 1.00 18.54 ? 87 HOH A O 1 HETATM 341 O O . HOH E 4 . ? 10.596 1.664 -10.139 1.00 30.50 ? 88 HOH A O 1 HETATM 342 O O . HOH E 4 . ? 12.332 -0.934 -9.524 1.00 34.88 ? 90 HOH A O 1 HETATM 343 O O . HOH E 4 . ? 12.198 -3.671 -9.479 1.00 30.23 ? 93 HOH A O 1 HETATM 344 O O . HOH E 4 . ? 5.853 1.510 -2.850 1.00 19.24 ? 94 HOH A O 1 HETATM 345 O O . HOH E 4 . ? 3.814 2.730 -0.946 1.00 25.28 ? 96 HOH A O 1 HETATM 346 O O . HOH F 4 . ? 20.218 -4.265 6.069 1.00 13.68 ? 2 HOH B O 1 HETATM 347 O O . HOH F 4 . ? 14.735 9.205 11.653 1.00 14.12 ? 4 HOH B O 1 HETATM 348 O O . HOH F 4 . ? 14.376 -2.375 -0.794 1.00 7.25 ? 5 HOH B O 1 HETATM 349 O O . HOH F 4 . ? 2.008 0.907 1.651 1.00 16.47 ? 8 HOH B O 1 HETATM 350 O O . HOH F 4 . ? 15.263 8.929 14.317 1.00 18.01 ? 16 HOH B O 1 HETATM 351 O O . HOH F 4 . ? 3.710 -1.266 3.448 1.00 27.61 ? 20 HOH B O 1 HETATM 352 O O . HOH F 4 . ? 6.055 -6.471 6.448 1.00 11.50 ? 21 HOH B O 1 HETATM 353 O O . HOH F 4 . ? 9.743 -7.259 9.059 1.00 21.26 ? 22 HOH B O 1 HETATM 354 O O . HOH F 4 . ? 7.968 -0.908 6.916 1.00 31.68 ? 23 HOH B O 1 HETATM 355 O O . HOH F 4 . ? 16.810 3.561 1.326 1.00 12.04 ? 28 HOH B O 1 HETATM 356 O O . HOH F 4 . ? 11.312 -1.286 7.474 1.00 21.45 ? 29 HOH B O 1 HETATM 357 O O . HOH F 4 . ? 13.576 -11.398 1.288 1.00 10.99 ? 31 HOH B O 1 HETATM 358 O O . HOH F 4 . ? 14.963 -1.625 9.610 1.00 7.35 ? 32 HOH B O 1 HETATM 359 O O . HOH F 4 . ? 17.220 10.354 8.631 1.00 14.95 ? 33 HOH B O 1 HETATM 360 O O . HOH F 4 . ? 6.301 -13.881 5.854 1.00 11.48 ? 35 HOH B O 1 HETATM 361 O O . HOH F 4 . ? -0.081 -9.387 2.230 1.00 15.06 ? 43 HOH B O 1 HETATM 362 O O . HOH F 4 . ? 13.917 -3.444 5.403 1.00 15.80 ? 44 HOH B O 1 HETATM 363 O O . HOH F 4 . ? 20.370 -7.235 5.312 1.00 13.61 ? 46 HOH B O 1 HETATM 364 O O . HOH F 4 . ? 17.127 -2.345 6.501 1.00 11.27 ? 48 HOH B O 1 HETATM 365 O O . HOH F 4 . ? 20.367 6.075 2.750 1.00 14.80 ? 49 HOH B O 1 HETATM 366 O O . HOH F 4 . ? 9.175 -3.743 7.887 1.00 20.12 ? 52 HOH B O 1 HETATM 367 O O . HOH F 4 . ? 1.255 -11.562 1.425 1.00 19.87 ? 53 HOH B O 1 HETATM 368 O O . HOH F 4 . ? 13.474 -12.561 3.841 1.00 15.56 ? 54 HOH B O 1 HETATM 369 O O . HOH F 4 . ? 20.097 3.737 1.151 1.00 18.00 ? 55 HOH B O 1 HETATM 370 O O . HOH F 4 . ? 18.694 0.797 11.894 1.00 27.99 ? 56 HOH B O 1 HETATM 371 O O . HOH F 4 . ? 19.840 10.881 10.965 1.00 17.63 ? 58 HOH B O 1 HETATM 372 O O . HOH F 4 . ? 6.072 -2.787 5.212 1.00 19.35 ? 59 HOH B O 1 HETATM 373 O O . HOH F 4 . ? 17.494 12.665 11.222 1.00 24.49 ? 61 HOH B O 1 HETATM 374 O O . HOH F 4 . ? 19.492 -0.963 8.481 1.00 23.51 ? 62 HOH B O 1 HETATM 375 O O . HOH F 4 . ? 16.500 -9.074 5.621 1.00 21.33 ? 63 HOH B O 1 HETATM 376 O O . HOH F 4 . ? 19.503 1.412 9.408 1.00 22.14 ? 64 HOH B O 1 HETATM 377 O O . HOH F 4 . ? 5.598 -9.376 8.827 1.00 27.64 ? 65 HOH B O 1 HETATM 378 O O . HOH F 4 . ? 9.571 -7.303 6.528 1.00 14.83 ? 73 HOH B O 1 HETATM 379 O O . HOH F 4 . ? 12.724 -5.790 6.916 1.00 19.49 ? 74 HOH B O 1 HETATM 380 O O . HOH F 4 . ? 16.704 -6.639 6.832 1.00 22.91 ? 75 HOH B O 1 HETATM 381 O O . HOH F 4 . ? 17.967 -9.509 3.507 1.00 31.40 ? 76 HOH B O 1 HETATM 382 O O . HOH F 4 . ? 15.356 12.649 10.017 1.00 25.94 ? 77 HOH B O 1 HETATM 383 O O . HOH F 4 . ? 15.187 -5.820 8.447 1.00 39.94 ? 78 HOH B O 1 HETATM 384 O O . HOH F 4 . ? 6.341 -12.270 9.368 1.00 28.71 ? 79 HOH B O 1 HETATM 385 O O . HOH F 4 . ? 15.222 6.821 3.939 1.00 21.81 ? 80 HOH B O 1 HETATM 386 O O . HOH F 4 . ? 15.975 -10.464 0.481 1.00 24.59 ? 81 HOH B O 1 HETATM 387 O O . HOH F 4 . ? 22.451 3.388 11.273 1.00 34.87 ? 86 HOH B O 1 HETATM 388 O O . HOH F 4 . ? 19.631 8.709 14.014 1.00 21.85 ? 89 HOH B O 1 HETATM 389 O O . HOH F 4 . ? 8.471 -14.309 9.852 1.00 8.70 ? 91 HOH B O 1 HETATM 390 O O . HOH F 4 . ? 22.029 5.946 12.294 1.00 25.00 ? 92 HOH B O 1 HETATM 391 O O . HOH F 4 . ? 17.345 7.859 5.462 1.00 23.75 ? 95 HOH B O 1 HETATM 392 O O . HOH F 4 . ? 17.771 -6.287 -0.267 0.50 10.06 ? 97 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GR A . n A 1 2 G 2 2 2 G GR A . n A 1 3 U 3 3 3 U UR A . n A 1 4 G 4 4 4 G GR A . n A 1 5 A 5 5 5 A AR A . n A 1 6 G 6 6 6 G GR A . n A 1 7 G 7 7 7 G GR A . n B 2 1 C 1 66 66 C CR B . n B 2 2 C 2 67 67 C CR B . n B 2 3 U 3 68 68 U UR B . n B 2 4 C 4 69 69 C CR B . n B 2 5 A 5 70 70 A AR B . n B 2 6 C 6 71 71 C CR B . n B 2 7 C 7 72 72 C CR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 8 1 MG MG A . D 3 MG 1 9 1 MG MG A . E 4 HOH 1 10 10 HOH HOH A . E 4 HOH 2 11 11 HOH HOH A . E 4 HOH 3 12 12 HOH HOH A . E 4 HOH 4 13 13 HOH HOH A . E 4 HOH 5 14 14 HOH HOH A . E 4 HOH 6 15 15 HOH HOH A . E 4 HOH 7 16 1 HOH HOH A . E 4 HOH 8 17 17 HOH HOH A . E 4 HOH 9 18 18 HOH HOH A . E 4 HOH 10 19 19 HOH HOH A . E 4 HOH 11 20 3 HOH HOH A . E 4 HOH 12 21 6 HOH HOH A . E 4 HOH 13 22 7 HOH HOH A . E 4 HOH 14 23 9 HOH HOH A . E 4 HOH 15 24 24 HOH HOH A . E 4 HOH 16 25 25 HOH HOH A . E 4 HOH 17 26 26 HOH HOH A . E 4 HOH 18 27 27 HOH HOH A . E 4 HOH 19 30 30 HOH HOH A . E 4 HOH 20 34 34 HOH HOH A . E 4 HOH 21 36 36 HOH HOH A . E 4 HOH 22 37 37 HOH HOH A . E 4 HOH 23 38 38 HOH HOH A . E 4 HOH 24 39 39 HOH HOH A . E 4 HOH 25 40 40 HOH HOH A . E 4 HOH 26 41 41 HOH HOH A . E 4 HOH 27 42 42 HOH HOH A . E 4 HOH 28 45 45 HOH HOH A . E 4 HOH 29 47 47 HOH HOH A . E 4 HOH 30 50 50 HOH HOH A . E 4 HOH 31 51 51 HOH HOH A . E 4 HOH 32 57 57 HOH HOH A . E 4 HOH 33 60 60 HOH HOH A . E 4 HOH 34 66 66 HOH HOH A . E 4 HOH 35 68 68 HOH HOH A . E 4 HOH 36 71 71 HOH HOH A . E 4 HOH 37 73 73 HOH HOH A . E 4 HOH 38 74 74 HOH HOH A . E 4 HOH 39 77 77 HOH HOH A . E 4 HOH 40 81 81 HOH HOH A . E 4 HOH 41 82 82 HOH HOH A . E 4 HOH 42 83 83 HOH HOH A . E 4 HOH 43 84 84 HOH HOH A . E 4 HOH 44 85 85 HOH HOH A . E 4 HOH 45 87 87 HOH HOH A . E 4 HOH 46 88 88 HOH HOH A . E 4 HOH 47 90 90 HOH HOH A . E 4 HOH 48 93 93 HOH HOH A . E 4 HOH 49 94 94 HOH HOH A . E 4 HOH 50 96 96 HOH HOH A . F 4 HOH 1 2 2 HOH HOH B . F 4 HOH 2 4 4 HOH HOH B . F 4 HOH 3 5 5 HOH HOH B . F 4 HOH 4 8 8 HOH HOH B . F 4 HOH 5 16 16 HOH HOH B . F 4 HOH 6 20 20 HOH HOH B . F 4 HOH 7 21 21 HOH HOH B . F 4 HOH 8 22 22 HOH HOH B . F 4 HOH 9 23 23 HOH HOH B . F 4 HOH 10 28 28 HOH HOH B . F 4 HOH 11 29 29 HOH HOH B . F 4 HOH 12 31 31 HOH HOH B . F 4 HOH 13 32 32 HOH HOH B . F 4 HOH 14 33 33 HOH HOH B . F 4 HOH 15 35 35 HOH HOH B . F 4 HOH 16 43 43 HOH HOH B . F 4 HOH 17 44 44 HOH HOH B . F 4 HOH 18 46 46 HOH HOH B . F 4 HOH 19 48 48 HOH HOH B . F 4 HOH 20 49 49 HOH HOH B . F 4 HOH 21 52 52 HOH HOH B . F 4 HOH 22 53 53 HOH HOH B . F 4 HOH 23 54 54 HOH HOH B . F 4 HOH 24 55 55 HOH HOH B . F 4 HOH 25 56 56 HOH HOH B . F 4 HOH 26 58 58 HOH HOH B . F 4 HOH 27 59 59 HOH HOH B . F 4 HOH 28 61 61 HOH HOH B . F 4 HOH 29 62 62 HOH HOH B . F 4 HOH 30 63 63 HOH HOH B . F 4 HOH 31 64 64 HOH HOH B . F 4 HOH 32 65 65 HOH HOH B . F 4 HOH 33 73 67 HOH HOH B . F 4 HOH 34 74 69 HOH HOH B . F 4 HOH 35 75 75 HOH HOH B . F 4 HOH 36 76 76 HOH HOH B . F 4 HOH 37 77 70 HOH HOH B . F 4 HOH 38 78 78 HOH HOH B . F 4 HOH 39 79 79 HOH HOH B . F 4 HOH 40 80 80 HOH HOH B . F 4 HOH 41 81 72 HOH HOH B . F 4 HOH 42 86 86 HOH HOH B . F 4 HOH 43 89 89 HOH HOH B . F 4 HOH 44 91 91 HOH HOH B . F 4 HOH 45 92 92 HOH HOH B . F 4 HOH 46 95 95 HOH HOH B . F 4 HOH 47 97 97 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 700 ? 1 MORE -3 ? 1 'SSA (A^2)' 2770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 12 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 14 ? 1_555 92.3 ? 2 O ? E HOH . ? A HOH 12 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 77 ? 1_555 174.5 ? 3 O ? E HOH . ? A HOH 14 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 77 ? 1_555 93.1 ? 4 O ? E HOH . ? A HOH 12 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 94 ? 1_555 90.9 ? 5 O ? E HOH . ? A HOH 14 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 94 ? 1_555 90.9 ? 6 O ? E HOH . ? A HOH 77 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 94 ? 1_555 89.1 ? 7 O ? E HOH . ? A HOH 12 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 96 ? 1_555 82.8 ? 8 O ? E HOH . ? A HOH 14 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 96 ? 1_555 174.9 ? 9 O ? E HOH . ? A HOH 77 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 96 ? 1_555 91.8 ? 10 O ? E HOH . ? A HOH 94 ? 1_555 MG ? C MG . ? A MG 8 ? 1_555 O ? E HOH . ? A HOH 96 ? 1_555 90.6 ? 11 O ? E HOH . ? A HOH 15 ? 1_555 MG ? D MG . ? A MG 9 ? 1_555 O ? E HOH . ? A HOH 16 ? 1_555 93.4 ? 12 O ? E HOH . ? A HOH 15 ? 1_555 MG ? D MG . ? A MG 9 ? 1_555 O ? E HOH . ? A HOH 21 ? 1_555 175.6 ? 13 O ? E HOH . ? A HOH 16 ? 1_555 MG ? D MG . ? A MG 9 ? 1_555 O ? E HOH . ? A HOH 21 ? 1_555 91.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.value' 6 3 'Structure model' '_struct_conn.pdbx_dist_value' 7 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 8 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.0 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C2 A G 1 ? ? N3 A G 1 ? ? 1.432 1.323 0.109 0.008 N 2 1 C5 A G 1 ? ? N7 A G 1 ? ? 1.470 1.388 0.082 0.006 N 3 1 C8 A G 1 ? ? N9 A G 1 ? ? 1.329 1.374 -0.045 0.007 N 4 1 C2 A G 2 ? ? N3 A G 2 ? ? 1.458 1.323 0.135 0.008 N 5 1 C4 A G 2 ? ? C5 A G 2 ? ? 1.451 1.379 0.072 0.007 N 6 1 C5 A G 2 ? ? N7 A G 2 ? ? 1.521 1.388 0.133 0.006 N 7 1 N7 A G 2 ? ? C8 A G 2 ? ? 1.347 1.305 0.042 0.006 N 8 1 "O3'" A G 2 ? ? P A U 3 ? ? 1.512 1.607 -0.095 0.012 Y 9 1 C2 A G 4 ? ? N3 A G 4 ? ? 1.438 1.323 0.115 0.008 N 10 1 C4 A G 4 ? ? C5 A G 4 ? ? 1.459 1.379 0.080 0.007 N 11 1 C5 A G 4 ? ? N7 A G 4 ? ? 1.514 1.388 0.126 0.006 N 12 1 N7 A G 4 ? ? C8 A G 4 ? ? 1.350 1.305 0.045 0.006 N 13 1 C2 A G 6 ? ? N3 A G 6 ? ? 1.445 1.323 0.122 0.008 N 14 1 C4 A G 6 ? ? C5 A G 6 ? ? 1.445 1.379 0.066 0.007 N 15 1 C5 A G 6 ? ? C6 A G 6 ? ? 1.354 1.419 -0.065 0.010 N 16 1 C5 A G 6 ? ? N7 A G 6 ? ? 1.552 1.388 0.164 0.006 N 17 1 N7 A G 6 ? ? C8 A G 6 ? ? 1.351 1.305 0.046 0.006 N 18 1 C2 A G 6 ? ? N2 A G 6 ? ? 1.403 1.341 0.062 0.010 N 19 1 C2 A G 7 ? ? N3 A G 7 ? ? 1.481 1.323 0.158 0.008 N 20 1 N3 A G 7 ? ? C4 A G 7 ? ? 1.307 1.350 -0.043 0.007 N 21 1 C5 A G 7 ? ? N7 A G 7 ? ? 1.527 1.388 0.139 0.006 N 22 1 N7 A G 7 ? ? C8 A G 7 ? ? 1.409 1.305 0.104 0.006 N 23 1 N3 B C 66 ? ? C4 B C 66 ? ? 1.281 1.335 -0.054 0.007 N 24 1 C4 B C 66 ? ? C5 B C 66 ? ? 1.364 1.425 -0.061 0.008 N 25 1 C2 B C 67 ? ? N3 B C 67 ? ? 1.428 1.353 0.075 0.008 N 26 1 N3 B C 67 ? ? C4 B C 67 ? ? 1.272 1.335 -0.063 0.007 N 27 1 P B U 68 ? ? OP2 B U 68 ? ? 1.378 1.485 -0.107 0.017 N 28 1 C4 B C 69 ? ? N4 B C 69 ? ? 1.397 1.335 0.062 0.009 N 29 1 N1 B C 69 ? ? C6 B C 69 ? ? 1.321 1.367 -0.046 0.006 N 30 1 C2 B C 69 ? ? N3 B C 69 ? ? 1.411 1.353 0.058 0.008 N 31 1 N3 B C 69 ? ? C4 B C 69 ? ? 1.244 1.335 -0.091 0.007 N 32 1 C4 B C 69 ? ? C5 B C 69 ? ? 1.350 1.425 -0.075 0.008 N 33 1 N3 B C 71 ? ? C4 B C 71 ? ? 1.276 1.335 -0.059 0.007 N 34 1 C4 B C 71 ? ? C5 B C 71 ? ? 1.308 1.425 -0.117 0.008 N 35 1 N3 B C 72 ? ? C4 B C 72 ? ? 1.269 1.335 -0.066 0.007 N 36 1 C4 B C 72 ? ? C5 B C 72 ? ? 1.366 1.425 -0.059 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C6 A G 1 ? ? N1 A G 1 ? ? C2 A G 1 ? ? 117.64 125.10 -7.46 0.60 N 2 1 N1 A G 1 ? ? C2 A G 1 ? ? N3 A G 1 ? ? 128.45 123.90 4.55 0.60 N 3 1 C2 A G 1 ? ? N3 A G 1 ? ? C4 A G 1 ? ? 108.21 111.90 -3.69 0.50 N 4 1 C4 A G 1 ? ? C5 A G 1 ? ? N7 A G 1 ? ? 106.93 110.80 -3.87 0.40 N 5 1 N1 A G 1 ? ? C2 A G 1 ? ? N2 A G 1 ? ? 109.60 116.20 -6.60 0.90 N 6 1 C5 A G 1 ? ? C6 A G 1 ? ? O6 A G 1 ? ? 124.59 128.60 -4.01 0.60 N 7 1 C6 A G 2 ? ? N1 A G 2 ? ? C2 A G 2 ? ? 119.89 125.10 -5.21 0.60 N 8 1 N1 A G 2 ? ? C2 A G 2 ? ? N3 A G 2 ? ? 128.86 123.90 4.96 0.60 N 9 1 C4 A G 2 ? ? C5 A G 2 ? ? C6 A G 2 ? ? 122.98 118.80 4.18 0.60 N 10 1 C4 A G 2 ? ? C5 A G 2 ? ? N7 A G 2 ? ? 106.48 110.80 -4.32 0.40 N 11 1 C8 A G 2 ? ? N9 A G 2 ? ? C4 A G 2 ? ? 109.07 106.40 2.67 0.40 N 12 1 N1 A G 2 ? ? C2 A G 2 ? ? N2 A G 2 ? ? 108.99 116.20 -7.21 0.90 N 13 1 "O5'" A U 3 ? ? P A U 3 ? ? OP2 A U 3 ? ? 99.34 105.70 -6.36 0.90 N 14 1 C2 A G 4 ? ? N3 A G 4 ? ? C4 A G 4 ? ? 105.91 111.90 -5.99 0.50 N 15 1 N3 A G 4 ? ? C4 A G 4 ? ? C5 A G 4 ? ? 131.77 128.60 3.17 0.50 N 16 1 C4 A G 4 ? ? C5 A G 4 ? ? N7 A G 4 ? ? 107.82 110.80 -2.98 0.40 N 17 1 C8 A G 4 ? ? N9 A G 4 ? ? C4 A G 4 ? ? 113.11 106.40 6.71 0.40 N 18 1 N1 A G 4 ? ? C6 A G 4 ? ? O6 A G 4 ? ? 125.47 119.90 5.57 0.60 N 19 1 C5 A G 4 ? ? C6 A G 4 ? ? O6 A G 4 ? ? 123.13 128.60 -5.47 0.60 N 20 1 C2 A G 6 ? ? N3 A G 6 ? ? C4 A G 6 ? ? 107.94 111.90 -3.96 0.50 N 21 1 C4 A G 6 ? ? C5 A G 6 ? ? N7 A G 6 ? ? 106.03 110.80 -4.77 0.40 N 22 1 C5 A G 6 ? ? N7 A G 6 ? ? C8 A G 6 ? ? 100.62 104.30 -3.68 0.50 N 23 1 N7 A G 6 ? ? C8 A G 6 ? ? N9 A G 6 ? ? 116.75 113.10 3.65 0.50 N 24 1 N9 A G 6 ? ? C4 A G 6 ? ? C5 A G 6 ? ? 107.96 105.40 2.56 0.40 N 25 1 N1 A G 6 ? ? C6 A G 6 ? ? O6 A G 6 ? ? 124.35 119.90 4.45 0.60 N 26 1 C5 A G 6 ? ? C6 A G 6 ? ? O6 A G 6 ? ? 121.95 128.60 -6.65 0.60 N 27 1 C6 A G 7 ? ? N1 A G 7 ? ? C2 A G 7 ? ? 118.01 125.10 -7.09 0.60 N 28 1 N1 A G 7 ? ? C2 A G 7 ? ? N3 A G 7 ? ? 127.81 123.90 3.91 0.60 N 29 1 C4 A G 7 ? ? C5 A G 7 ? ? C6 A G 7 ? ? 123.39 118.80 4.59 0.60 N 30 1 C8 A G 7 ? ? N9 A G 7 ? ? C4 A G 7 ? ? 109.20 106.40 2.80 0.40 N 31 1 N9 A G 7 ? ? C4 A G 7 ? ? C5 A G 7 ? ? 107.86 105.40 2.46 0.40 N 32 1 N1 B C 66 ? ? C2 B C 66 ? ? N3 B C 66 ? ? 113.18 119.20 -6.02 0.70 N 33 1 C2 B C 66 ? ? N3 B C 66 ? ? C4 B C 66 ? ? 125.05 119.90 5.15 0.50 N 34 1 C6 B C 67 ? ? N1 B C 67 ? ? C2 B C 67 ? ? 112.85 120.30 -7.45 0.40 N 35 1 C2 B C 67 ? ? N3 B C 67 ? ? C4 B C 67 ? ? 129.10 119.90 9.20 0.50 N 36 1 N3 B C 67 ? ? C4 B C 67 ? ? C5 B C 67 ? ? 109.89 121.90 -12.01 0.40 N 37 1 C4 B C 67 ? ? C5 B C 67 ? ? C6 B C 67 ? ? 124.39 117.40 6.99 0.50 N 38 1 C5 B C 67 ? ? C6 B C 67 ? ? N1 B C 67 ? ? 124.39 121.00 3.39 0.50 N 39 1 N3 B C 67 ? ? C4 B C 67 ? ? N4 B C 67 ? ? 123.58 118.00 5.58 0.70 N 40 1 C5 B C 67 ? ? C4 B C 67 ? ? N4 B C 67 ? ? 126.50 120.20 6.30 0.70 N 41 1 C6 B C 69 ? ? N1 B C 69 ? ? C2 B C 69 ? ? 115.92 120.30 -4.38 0.40 N 42 1 C2 B C 69 ? ? N3 B C 69 ? ? C4 B C 69 ? ? 122.93 119.90 3.03 0.50 N 43 1 N3 B C 69 ? ? C4 B C 69 ? ? C5 B C 69 ? ? 113.47 121.90 -8.43 0.40 N 44 1 C4 B C 69 ? ? C5 B C 69 ? ? C6 B C 69 ? ? 129.88 117.40 12.48 0.50 N 45 1 C5 B C 69 ? ? C6 B C 69 ? ? N1 B C 69 ? ? 117.29 121.00 -3.71 0.50 N 46 1 C5 B C 69 ? ? C4 B C 69 ? ? N4 B C 69 ? ? 130.86 120.20 10.66 0.70 N 47 1 C5 B A 70 ? ? N7 B A 70 ? ? C8 B A 70 ? ? 106.96 103.90 3.06 0.50 N 48 1 N7 B A 70 ? ? C8 B A 70 ? ? N9 B A 70 ? ? 110.04 113.80 -3.76 0.50 N 49 1 C6 B C 71 ? ? N1 B C 71 ? ? C2 B C 71 ? ? 115.46 120.30 -4.84 0.40 N 50 1 C2 B C 71 ? ? N3 B C 71 ? ? C4 B C 71 ? ? 124.47 119.90 4.57 0.50 N 51 1 N3 B C 71 ? ? C4 B C 71 ? ? C5 B C 71 ? ? 118.44 121.90 -3.46 0.40 N 52 1 C4 B C 71 ? ? C5 B C 71 ? ? C6 B C 71 ? ? 121.05 117.40 3.65 0.50 N 53 1 N3 B C 72 ? ? C4 B C 72 ? ? C5 B C 72 ? ? 119.42 121.90 -2.48 0.40 N 54 1 C4 B C 72 ? ? C5 B C 72 ? ? C6 B C 72 ? ? 121.89 117.40 4.49 0.50 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # _ndb_struct_conf_na.entry_id 3GVN _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 7 1_555 -0.308 -0.138 -0.114 -5.780 -6.759 -1.294 1 A_G1:C72_B A 1 ? B 72 ? 19 1 1 A G 2 1_555 B C 6 1_555 -0.378 -0.151 -0.106 -8.684 -14.431 1.189 2 A_G2:C71_B A 2 ? B 71 ? 19 1 1 A U 3 1_555 B A 5 1_555 -0.101 -0.073 -0.004 -1.905 -2.938 -0.101 3 A_U3:A70_B A 3 ? B 70 ? 20 1 1 A G 4 1_555 B C 4 1_555 -0.277 -0.114 -0.011 -0.227 -8.074 -0.851 4 A_G4:C69_B A 4 ? B 69 ? 19 1 1 A A 5 1_555 B U 3 1_555 -0.074 -0.170 -0.056 -0.416 -9.750 -1.077 5 A_A5:U68_B A 5 ? B 68 ? 20 1 1 A G 6 1_555 B C 2 1_555 -0.329 -0.265 0.082 -6.167 -16.178 -1.482 6 A_G6:C67_B A 6 ? B 67 ? 19 1 1 A G 7 1_555 B C 1 1_555 -0.210 -0.111 0.009 -9.052 -15.119 -0.273 7 A_G7:C66_B A 7 ? B 66 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 7 1_555 A G 2 1_555 B C 6 1_555 -0.300 -2.040 3.380 -0.706 4.673 30.820 -4.677 0.425 3.051 8.729 1.318 31.172 1 AA_G1G2:C71C72_BB A 1 ? B 72 ? A 2 ? B 71 ? 1 A G 2 1_555 B C 6 1_555 A U 3 1_555 B A 5 1_555 -0.485 -1.272 3.100 -2.976 8.942 31.779 -3.593 0.398 2.686 15.897 5.291 33.112 2 AA_G2U3:A70C71_BB A 2 ? B 71 ? A 3 ? B 70 ? 1 A U 3 1_555 B A 5 1_555 A G 4 1_555 B C 4 1_555 1.271 -2.036 3.253 0.836 7.900 24.397 -6.611 -2.650 2.520 18.090 -1.915 25.639 3 AA_U3G4:C69A70_BB A 3 ? B 70 ? A 4 ? B 69 ? 1 A G 4 1_555 B C 4 1_555 A A 5 1_555 B U 3 1_555 -0.976 -1.844 3.192 -1.761 6.139 34.864 -3.875 1.361 2.880 10.141 2.908 35.426 4 AA_G4A5:U68C69_BB A 4 ? B 69 ? A 5 ? B 68 ? 1 A A 5 1_555 B U 3 1_555 A G 6 1_555 B C 2 1_555 -0.101 -1.322 3.411 -0.922 4.536 30.592 -3.369 0.008 3.188 8.535 1.735 30.932 5 AA_A5G6:C67U68_BB A 5 ? B 68 ? A 6 ? B 67 ? 1 A G 6 1_555 B C 2 1_555 A G 7 1_555 B C 1 1_555 0.823 -1.583 3.233 4.561 7.477 36.517 -3.398 -0.708 2.941 11.725 -7.153 37.517 6 AA_G6G7:C66C67_BB A 6 ? B 67 ? A 7 ? B 66 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2V6W _pdbx_initial_refinement_model.details ? #