data_3IXN # _entry.id 3IXN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IXN pdb_00003ixn 10.2210/pdb3ixn/pdb NDB NA0140 ? ? RCSB RCSB054993 ? ? WWPDB D_1000054993 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-03-20 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_site 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IXN _pdbx_database_status.recvd_initial_deposition_date 2009-09-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Venkadesh, S.' 1 'Mandal, P.K.' 2 'Gautham, N.' 3 # _citation.id primary _citation.title 'Crystal Structure of inverted repeat sequence d(CCGGTACCGG)as B-DNA duplex' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Venkadesh, S.' 1 ? primary 'Mandal, P.K.' 2 ? primary 'Gautham, N.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3') ; 3045.992 2 ? ? ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 3 ? ? ? ? 3 water nat water 18.015 11 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DT)(DA)(DC)(DC)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCGGTACCGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemically synthethised' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DC 7 7 7 DC DC A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DC 2 2 2 DC DC B . n B 1 3 DG 3 3 3 DG DG B . n B 1 4 DG 4 4 4 DG DG B . n B 1 5 DT 5 5 5 DT DT B . n B 1 6 DA 6 6 6 DA DA B . n B 1 7 DC 7 7 7 DC DC B . n B 1 8 DC 8 8 8 DC DC B . n B 1 9 DG 9 9 9 DG DG B . n B 1 10 DG 10 10 10 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO 1 11 1 CO CO A . D 2 CO 1 11 2 CO CO B . E 2 CO 1 12 3 CO CO B . F 3 HOH 1 12 1 HOH HOH A . F 3 HOH 2 13 3 HOH HOH A . F 3 HOH 3 14 4 HOH HOH A . F 3 HOH 4 15 6 HOH HOH A . F 3 HOH 5 16 7 HOH HOH A . F 3 HOH 6 17 8 HOH HOH A . G 3 HOH 1 13 2 HOH HOH B . G 3 HOH 2 14 5 HOH HOH B . G 3 HOH 3 15 9 HOH HOH B . G 3 HOH 4 16 10 HOH HOH B . G 3 HOH 5 18 11 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 AUTOMAR 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 3IXN _cell.length_a 32.940 _cell.length_b 32.940 _cell.length_c 94.854 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IXN _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3IXN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '5mM CoCl2, 1mM spermine, 50% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2009-06-26 _diffrn_detector.details 'Double Crystal' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3IXN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.87 _reflns.number_obs 1365 _reflns.number_all 1378 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rsym_value 0.081 _reflns.pdbx_netI_over_sigmaI 6.2 _reflns.B_iso_Wilson_estimate 69.9 _reflns.pdbx_redundancy 10.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.87 _reflns_shell.d_res_low 2.97 _reflns_shell.percent_possible_all 97.8 _reflns_shell.Rmerge_I_obs 0.286 _reflns_shell.pdbx_Rsym_value 0.279 _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.pdbx_redundancy 10.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 135 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3IXN _refine.ls_number_reflns_obs 1160 _refine.ls_number_reflns_all 1365 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.53 _refine.ls_d_res_high 2.87 _refine.ls_percent_reflns_obs 91.20 _refine.ls_R_factor_obs 0.26212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.26146 _refine.ls_R_factor_R_free 0.27469 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 63 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.923 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 39.728 _refine.aniso_B[1][1] -16.39 _refine.aniso_B[2][2] -16.39 _refine.aniso_B[3][3] 32.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Fiber model built in INSIGHTII software' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.105 _refine.overall_SU_ML 0.330 _refine.overall_SU_B 17.290 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3IXN _refine_analyze.Luzzati_coordinate_error_obs 0.635 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 418 _refine_hist.d_res_high 2.87 _refine_hist.d_res_low 28.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.025 0.021 ? 452 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3.964 3.000 ? 694 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.227 0.200 ? 78 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.018 0.020 ? 210 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 5.568 3.000 ? 452 'X-RAY DIFFRACTION' ? r_scangle_it 7.405 4.500 ? 694 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.873 _refine_ls_shell.d_res_low 2.947 _refine_ls_shell.number_reflns_R_work 88 _refine_ls_shell.R_factor_R_work 0.682 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.933 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 6 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 91 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3IXN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3IXN _struct.title 'Crystal structure of d(CCGGTACCGG) as B-DNA duplex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IXN _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3IXN _struct_ref.pdbx_db_accession 3IXN _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IXN A 1 ? 10 ? 3IXN 1 ? 10 ? 1 10 2 1 3IXN B 1 ? 10 ? 3IXN 1 ? 10 ? 1 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 900 ? 1 MORE -3 ? 1 'SSA (A^2)' 3830 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B DG 9 N7 ? ? ? 1_555 E CO . CO ? ? B DG 9 B CO 12 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc2 metalc ? ? D CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 11 B HOH 13 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc3 metalc ? ? D CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 11 B HOH 18 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc4 metalc ? ? E CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 12 B HOH 16 1_555 ? ? ? ? ? ? ? 2.499 ? ? hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 1 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog10 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? B DG 9 ? B DG 9 ? 1_555 CO ? E CO . ? B CO 12 ? 1_555 O ? G HOH . ? B HOH 16 ? 1_555 68.4 ? 2 O ? G HOH . ? B HOH 13 ? 1_555 CO ? D CO . ? B CO 11 ? 1_555 O ? G HOH . ? B HOH 18 ? 1_555 163.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CO 11 ? 2 'BINDING SITE FOR RESIDUE CO A 11' AC2 Software B CO 11 ? 3 'BINDING SITE FOR RESIDUE CO B 11' AC3 Software B CO 12 ? 2 'BINDING SITE FOR RESIDUE CO B 12' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DG A 3 ? DG A 3 . ? 1_555 ? 2 AC1 2 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC2 3 DG B 3 ? DG B 3 . ? 1_555 ? 4 AC2 3 HOH G . ? HOH B 13 . ? 1_555 ? 5 AC2 3 HOH G . ? HOH B 18 . ? 1_555 ? 6 AC3 2 DG B 9 ? DG B 9 . ? 1_555 ? 7 AC3 2 HOH G . ? HOH B 16 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N1 A DC 2 ? ? C2 A DC 2 ? ? 1.478 1.397 0.081 0.010 N 2 1 C5 A DG 9 ? ? N7 A DG 9 ? ? 1.435 1.388 0.047 0.006 N 3 1 "C1'" A DG 10 ? ? N9 A DG 10 ? ? 1.706 1.488 0.218 0.013 N 4 1 "C5'" B DC 1 ? ? "C4'" B DC 1 ? ? 1.555 1.512 0.043 0.007 N 5 1 C2 B DG 4 ? ? N3 B DG 4 ? ? 1.373 1.323 0.050 0.008 N 6 1 C4 B DG 4 ? ? C5 B DG 4 ? ? 1.333 1.379 -0.046 0.007 N 7 1 "O3'" B DT 5 ? ? "C3'" B DT 5 ? ? 1.328 1.419 -0.091 0.006 N 8 1 "C1'" B DC 7 ? ? N1 B DC 7 ? ? 1.586 1.488 0.098 0.013 N 9 1 N1 B DC 7 ? ? C2 B DC 7 ? ? 1.460 1.397 0.063 0.010 N 10 1 "C5'" B DC 8 ? ? "C4'" B DC 8 ? ? 1.556 1.512 0.044 0.007 N 11 1 C2 B DG 10 ? ? N3 B DG 10 ? ? 1.377 1.323 0.054 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 110.36 106.80 3.56 0.50 N 2 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.35 108.30 4.05 0.30 N 3 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 100.88 104.50 -3.62 0.40 N 4 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.89 118.90 4.99 0.60 N 5 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 115.59 121.90 -6.31 0.70 N 6 1 C6 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 112.81 120.80 -7.99 1.20 N 7 1 C2 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 127.59 118.80 8.79 1.10 N 8 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DG 3 ? ? 132.80 119.70 13.10 1.20 Y 9 1 C6 A DG 3 ? ? N1 A DG 3 ? ? C2 A DG 3 ? ? 121.23 125.10 -3.87 0.60 N 10 1 N3 A DG 3 ? ? C4 A DG 3 ? ? C5 A DG 3 ? ? 123.30 128.60 -5.30 0.50 N 11 1 C5 A DG 3 ? ? C6 A DG 3 ? ? N1 A DG 3 ? ? 115.40 111.50 3.90 0.50 N 12 1 N7 A DG 3 ? ? C8 A DG 3 ? ? N9 A DG 3 ? ? 116.31 113.10 3.21 0.50 N 13 1 C8 A DG 3 ? ? N9 A DG 3 ? ? C4 A DG 3 ? ? 101.20 106.40 -5.20 0.40 N 14 1 N9 A DG 3 ? ? C4 A DG 3 ? ? C5 A DG 3 ? ? 108.95 105.40 3.55 0.40 N 15 1 N1 A DG 3 ? ? C6 A DG 3 ? ? O6 A DG 3 ? ? 113.73 119.90 -6.17 0.60 N 16 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 131.47 119.70 11.77 1.20 Y 17 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.48 102.20 -4.72 0.70 N 18 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.22 108.30 2.92 0.30 N 19 1 N3 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 124.87 128.60 -3.73 0.50 N 20 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.99 106.40 -2.41 0.40 N 21 1 N3 A DG 4 ? ? C4 A DG 4 ? ? N9 A DG 4 ? ? 129.86 126.00 3.86 0.60 N 22 1 C6 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 125.63 130.40 -4.77 0.60 N 23 1 N1 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 110.35 116.20 -5.85 0.90 N 24 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 125.03 119.90 5.13 0.70 N 25 1 "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? "C1'" A DT 5 ? ? 95.06 102.40 -7.34 0.80 N 26 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.86 108.30 3.56 0.30 N 27 1 "C3'" A DA 6 ? ? "C2'" A DA 6 ? ? "C1'" A DA 6 ? ? 97.22 102.40 -5.18 0.80 N 28 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 101.79 108.00 -6.21 0.70 N 29 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.39 108.30 3.09 0.30 N 30 1 "C3'" A DC 7 ? ? "O3'" A DC 7 ? ? P A DC 8 ? ? 132.49 119.70 12.79 1.20 Y 31 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 100.55 104.50 -3.95 0.40 N 32 1 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? "O4'" A DG 9 ? ? 118.75 109.80 8.95 1.10 N 33 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 118.23 108.30 9.93 0.30 N 34 1 C4 A DG 9 ? ? C5 A DG 9 ? ? C6 A DG 9 ? ? 114.98 118.80 -3.82 0.60 N 35 1 C5 A DG 9 ? ? C6 A DG 9 ? ? N1 A DG 9 ? ? 114.79 111.50 3.29 0.50 N 36 1 C4 A DG 9 ? ? C5 A DG 9 ? ? N7 A DG 9 ? ? 113.41 110.80 2.61 0.40 N 37 1 N9 A DG 9 ? ? C4 A DG 9 ? ? C5 A DG 9 ? ? 102.84 105.40 -2.56 0.40 N 38 1 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 115.54 119.90 -4.36 0.60 N 39 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 98.14 108.00 -9.86 0.70 N 40 1 C5 A DG 10 ? ? N7 A DG 10 ? ? C8 A DG 10 ? ? 100.88 104.30 -3.42 0.50 N 41 1 N7 A DG 10 ? ? C8 A DG 10 ? ? N9 A DG 10 ? ? 117.84 113.10 4.74 0.50 N 42 1 C8 A DG 10 ? ? N9 A DG 10 ? ? C4 A DG 10 ? ? 101.27 106.40 -5.13 0.40 N 43 1 "O4'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 100.74 104.50 -3.76 0.40 N 44 1 "C5'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 124.19 115.70 8.49 1.20 N 45 1 "C1'" B DC 2 ? ? "O4'" B DC 2 ? ? "C4'" B DC 2 ? ? 114.80 110.30 4.50 0.70 N 46 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 124.33 118.90 5.43 0.60 N 47 1 C6 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 105.48 120.80 -15.32 1.20 N 48 1 C2 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 132.69 118.80 13.89 1.10 N 49 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 102.36 108.00 -5.64 0.70 N 50 1 C5 B DG 3 ? ? C6 B DG 3 ? ? O6 B DG 3 ? ? 124.64 128.60 -3.96 0.60 N 51 1 C6 B DG 4 ? ? N1 B DG 4 ? ? C2 B DG 4 ? ? 121.14 125.10 -3.96 0.60 N 52 1 C2 B DG 4 ? ? N3 B DG 4 ? ? C4 B DG 4 ? ? 116.16 111.90 4.26 0.50 N 53 1 N3 B DG 4 ? ? C4 B DG 4 ? ? C5 B DG 4 ? ? 125.57 128.60 -3.03 0.50 N 54 1 N3 B DG 4 ? ? C2 B DG 4 ? ? N2 B DG 4 ? ? 125.60 119.90 5.70 0.70 N 55 1 C5 B DG 4 ? ? C6 B DG 4 ? ? O6 B DG 4 ? ? 124.30 128.60 -4.30 0.60 N 56 1 "C3'" B DG 4 ? ? "O3'" B DG 4 ? ? P B DT 5 ? ? 110.43 119.70 -9.27 1.20 Y 57 1 "O5'" B DT 5 ? ? "C5'" B DT 5 ? ? "C4'" B DT 5 ? ? 104.04 109.40 -5.36 0.80 N 58 1 "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? 95.14 104.50 -9.36 0.40 N 59 1 "C1'" B DT 5 ? ? "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? 103.69 110.10 -6.41 1.00 N 60 1 "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? "C1'" B DT 5 ? ? 96.30 102.40 -6.10 0.80 N 61 1 "O4'" B DT 5 ? ? "C1'" B DT 5 ? ? N1 B DT 5 ? ? 115.52 108.30 7.22 0.30 N 62 1 N1 B DT 5 ? ? C2 B DT 5 ? ? O2 B DT 5 ? ? 128.52 123.10 5.42 0.80 N 63 1 "C3'" B DT 5 ? ? "O3'" B DT 5 ? ? P B DA 6 ? ? 97.98 119.70 -21.72 1.20 Y 64 1 "O5'" B DA 6 ? ? P B DA 6 ? ? OP1 B DA 6 ? ? 118.34 110.70 7.64 1.20 N 65 1 "O5'" B DA 6 ? ? P B DA 6 ? ? OP2 B DA 6 ? ? 99.65 105.70 -6.05 0.90 N 66 1 "O4'" B DA 6 ? ? "C4'" B DA 6 ? ? "C3'" B DA 6 ? ? 101.42 104.50 -3.08 0.40 N 67 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? "C3'" B DC 7 ? ? 123.19 115.70 7.49 1.20 N 68 1 "C1'" B DC 7 ? ? "O4'" B DC 7 ? ? "C4'" B DC 7 ? ? 102.58 110.10 -7.52 1.00 N 69 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? "C2'" B DC 7 ? ? 99.23 105.90 -6.67 0.80 N 70 1 N1 B DC 7 ? ? C2 B DC 7 ? ? N3 B DC 7 ? ? 114.77 119.20 -4.43 0.70 N 71 1 N1 B DC 7 ? ? C2 B DC 7 ? ? O2 B DC 7 ? ? 126.68 118.90 7.78 0.60 N 72 1 C6 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 106.22 120.80 -14.58 1.20 N 73 1 C2 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 131.09 118.80 12.29 1.10 N 74 1 "O4'" B DC 8 ? ? "C4'" B DC 8 ? ? "C3'" B DC 8 ? ? 99.95 104.50 -4.55 0.40 N 75 1 "C3'" B DC 8 ? ? "C2'" B DC 8 ? ? "C1'" B DC 8 ? ? 97.12 102.40 -5.28 0.80 N 76 1 N3 B DC 8 ? ? C4 B DC 8 ? ? C5 B DC 8 ? ? 125.39 121.90 3.49 0.40 N 77 1 "C1'" B DG 9 ? ? "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? 103.21 110.10 -6.89 1.00 N 78 1 "C3'" B DG 9 ? ? "C2'" B DG 9 ? ? "C1'" B DG 9 ? ? 97.17 102.40 -5.23 0.80 N 79 1 N9 B DG 9 ? ? "C1'" B DG 9 ? ? "C2'" B DG 9 ? ? 124.91 114.30 10.61 1.40 N 80 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 110.94 108.30 2.64 0.30 N 81 1 N3 B DG 9 ? ? C4 B DG 9 ? ? C5 B DG 9 ? ? 131.65 128.60 3.05 0.50 N 82 1 C4 B DG 9 ? ? C5 B DG 9 ? ? C6 B DG 9 ? ? 114.36 118.80 -4.44 0.60 N 83 1 C5 B DG 9 ? ? C6 B DG 9 ? ? N1 B DG 9 ? ? 116.77 111.50 5.27 0.50 N 84 1 C4 B DG 9 ? ? C5 B DG 9 ? ? N7 B DG 9 ? ? 115.52 110.80 4.72 0.40 N 85 1 C5 B DG 9 ? ? N7 B DG 9 ? ? C8 B DG 9 ? ? 98.29 104.30 -6.01 0.50 N 86 1 N7 B DG 9 ? ? C8 B DG 9 ? ? N9 B DG 9 ? ? 116.70 113.10 3.60 0.50 N 87 1 N1 B DG 9 ? ? C2 B DG 9 ? ? N2 B DG 9 ? ? 122.58 116.20 6.38 0.90 N 88 1 N3 B DG 9 ? ? C2 B DG 9 ? ? N2 B DG 9 ? ? 115.11 119.90 -4.79 0.70 N 89 1 C5 B DG 9 ? ? C6 B DG 9 ? ? O6 B DG 9 ? ? 121.31 128.60 -7.29 0.60 N 90 1 C8 B DG 9 ? ? N9 B DG 9 ? ? "C1'" B DG 9 ? ? 135.28 127.00 8.28 1.30 N 91 1 "C3'" B DG 9 ? ? "O3'" B DG 9 ? ? P B DG 10 ? ? 131.36 119.70 11.66 1.20 Y 92 1 N3 B DG 10 ? ? C4 B DG 10 ? ? N9 B DG 10 ? ? 129.85 126.00 3.85 0.60 N 93 1 C6 B DG 10 ? ? C5 B DG 10 ? ? N7 B DG 10 ? ? 125.04 130.40 -5.36 0.60 N 94 1 N3 B DG 10 ? ? C2 B DG 10 ? ? N2 B DG 10 ? ? 124.74 119.90 4.84 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CO CO CO N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3IXN 'double helix' 3IXN 'b-form double helix' 3IXN 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.008 -0.017 0.609 2.381 -5.555 -12.514 1 A_DC1:DG10_B A 1 ? B 10 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 -0.702 0.039 0.628 -5.797 -1.697 -22.281 2 A_DC2:DG9_B A 2 ? B 9 ? ? 1 1 A DG 3 1_555 B DC 8 1_555 1.171 -0.142 0.318 9.384 -9.562 -22.896 3 A_DG3:DC8_B A 3 ? B 8 ? 19 1 1 A DG 4 1_555 B DC 7 1_555 0.431 0.232 0.290 4.346 -3.784 -14.422 4 A_DG4:DC7_B A 4 ? B 7 ? 19 1 1 A DA 6 1_555 B DT 5 1_555 0.739 -0.468 0.654 20.141 -15.783 -13.738 5 A_DA6:DT5_B A 6 ? B 5 ? 20 1 1 A DC 7 1_555 B DG 4 1_555 0.196 -0.463 -0.025 2.131 1.814 -4.027 6 A_DC7:DG4_B A 7 ? B 4 ? 19 1 1 A DC 8 1_555 B DG 3 1_555 -0.055 -0.339 0.770 -10.571 2.224 -9.753 7 A_DC8:DG3_B A 8 ? B 3 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 0.167 0.116 0.912 5.780 -1.820 -17.856 8 A_DG9:DC2_B A 9 ? B 2 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 0.704 -0.057 0.449 2.256 -2.504 -14.833 9 A_DG10:DC1_B A 10 ? B 1 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 1.295 -1.381 3.199 -5.599 7.871 50.407 -2.099 -1.855 2.819 9.145 6.505 51.264 1 AA_DC1DC2:DG9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.730 0.950 3.108 3.750 -0.094 27.125 2.028 2.411 2.978 -0.198 -7.947 27.379 2 AA_DC2DG3:DC8DG9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A DG 3 1_555 B DC 8 1_555 A DG 4 1_555 B DC 7 1_555 0.205 0.053 3.524 -6.037 -0.915 35.063 0.229 -1.279 3.440 -1.505 9.928 35.575 3 AA_DG3DG4:DC7DC8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A DG 4 1_555 B DC 7 1_555 A DA 6 1_555 B DT 5 1_555 0.349 -0.965 6.547 -4.092 -2.072 68.201 -0.704 -0.618 6.543 -1.846 3.645 68.336 4 AA_DG4DA6:DT5DC7_BB A 4 ? B 7 ? A 6 ? B 5 ? 1 A DA 6 1_555 B DT 5 1_555 A DC 7 1_555 B DG 4 1_555 0.276 -1.060 3.683 3.895 0.828 29.728 -2.240 0.370 3.658 1.604 -7.549 29.987 5 AA_DA6DC7:DG4DT5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A DC 7 1_555 B DG 4 1_555 A DC 8 1_555 B DG 3 1_555 -0.287 -0.116 3.673 -2.341 -2.956 36.905 0.263 0.098 3.682 -4.654 3.686 37.090 6 AA_DC7DC8:DG3DG4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 0.503 0.148 2.952 5.374 1.203 18.241 -0.125 1.040 2.978 3.687 -16.472 19.048 7 AA_DC8DG9:DC2DG3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 -0.019 -0.339 3.286 -0.553 7.603 45.669 -1.077 -0.023 3.193 9.715 0.707 46.267 8 AA_DG9DG10:DC1DC2_BB A 9 ? B 2 ? A 10 ? B 1 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name InsightII _pdbx_initial_refinement_model.details 'Fiber model built in INSIGHTII software' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.539 2 1 1 ? '-H-K, K, -L' 0.461 # _atom_sites.entry_id 3IXN _atom_sites.fract_transf_matrix[1][1] 0.030358 _atom_sites.fract_transf_matrix[1][2] 0.017527 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035055 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010543 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 13.955 -0.596 8.111 1.00 39.56 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 13.401 0.078 6.966 1.00 35.77 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 14.339 0.227 5.778 1.00 30.45 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 14.595 -1.108 5.288 1.00 23.72 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 13.718 0.944 4.565 1.00 35.77 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 13.649 2.416 4.621 1.00 44.20 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 14.470 0.375 3.343 1.00 28.36 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 14.973 -0.970 3.905 1.00 26.39 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 14.800 -2.287 3.114 1.00 13.70 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 14.881 -2.349 1.706 1.00 19.53 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 15.026 -1.259 1.077 1.00 19.21 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 14.752 -3.604 1.108 1.00 11.68 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 14.619 -4.739 1.847 1.00 15.57 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 14.525 -5.963 1.259 1.00 11.85 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 14.544 -4.660 3.275 1.00 11.17 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 14.626 -3.444 3.833 1.00 12.11 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? 12.254 3.185 4.264 1.00 51.37 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? 12.212 4.504 4.959 1.00 46.75 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? 11.144 2.248 4.553 1.00 52.64 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? 12.343 3.311 2.661 1.00 49.92 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? 13.098 2.351 1.852 1.00 53.01 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? 12.344 1.580 0.753 1.00 60.27 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? 12.658 0.161 0.728 1.00 51.95 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? 10.822 1.537 0.795 1.00 56.93 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? 10.279 2.932 0.708 1.00 59.98 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? 10.580 0.481 -0.306 1.00 53.66 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? 11.831 -0.420 -0.264 1.00 55.61 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? 11.706 -1.902 0.145 1.00 53.65 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? 11.652 -3.081 -0.744 1.00 64.90 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? 11.649 -3.013 -1.996 1.00 65.13 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? 11.638 -4.359 -0.215 1.00 61.07 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? 11.690 -4.484 1.123 1.00 63.98 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? 11.674 -5.742 1.600 1.00 57.35 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? 11.769 -3.334 2.026 1.00 56.87 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? 11.779 -2.087 1.501 1.00 60.66 ? 2 DC A C6 1 ATOM 36 P P . DG A 1 3 ? 9.618 3.783 -0.503 1.00 61.10 ? 3 DG A P 1 ATOM 37 O OP1 . DG A 1 3 ? 10.680 4.610 -1.151 1.00 59.68 ? 3 DG A OP1 1 ATOM 38 O OP2 . DG A 1 3 ? 8.494 4.569 0.087 1.00 53.30 ? 3 DG A OP2 1 ATOM 39 O "O5'" . DG A 1 3 ? 9.123 2.582 -1.485 1.00 53.30 ? 3 DG A "O5'" 1 ATOM 40 C "C5'" . DG A 1 3 ? 9.737 2.344 -2.789 1.00 47.47 ? 3 DG A "C5'" 1 ATOM 41 C "C4'" . DG A 1 3 ? 8.763 1.589 -3.669 1.00 39.99 ? 3 DG A "C4'" 1 ATOM 42 O "O4'" . DG A 1 3 ? 8.880 0.171 -3.345 1.00 39.46 ? 3 DG A "O4'" 1 ATOM 43 C "C3'" . DG A 1 3 ? 7.331 2.005 -3.377 1.00 37.99 ? 3 DG A "C3'" 1 ATOM 44 O "O3'" . DG A 1 3 ? 6.608 2.734 -4.460 1.00 42.44 ? 3 DG A "O3'" 1 ATOM 45 C "C2'" . DG A 1 3 ? 6.688 0.742 -2.751 1.00 35.61 ? 3 DG A "C2'" 1 ATOM 46 C "C1'" . DG A 1 3 ? 7.664 -0.427 -2.946 1.00 30.48 ? 3 DG A "C1'" 1 ATOM 47 N N9 . DG A 1 3 ? 7.906 -1.373 -1.817 1.00 21.53 ? 3 DG A N9 1 ATOM 48 C C8 . DG A 1 3 ? 7.951 -1.102 -0.463 1.00 27.32 ? 3 DG A C8 1 ATOM 49 N N7 . DG A 1 3 ? 8.190 -2.141 0.341 1.00 17.45 ? 3 DG A N7 1 ATOM 50 C C5 . DG A 1 3 ? 8.316 -3.198 -0.529 1.00 7.52 ? 3 DG A C5 1 ATOM 51 C C6 . DG A 1 3 ? 8.573 -4.558 -0.248 1.00 2.00 ? 3 DG A C6 1 ATOM 52 O O6 . DG A 1 3 ? 8.755 -5.137 0.819 1.00 2.00 ? 3 DG A O6 1 ATOM 53 N N1 . DG A 1 3 ? 8.600 -5.384 -1.332 1.00 2.00 ? 3 DG A N1 1 ATOM 54 C C2 . DG A 1 3 ? 8.423 -4.904 -2.584 1.00 6.64 ? 3 DG A C2 1 ATOM 55 N N2 . DG A 1 3 ? 8.529 -5.892 -3.496 1.00 8.50 ? 3 DG A N2 1 ATOM 56 N N3 . DG A 1 3 ? 8.184 -3.599 -2.907 1.00 12.09 ? 3 DG A N3 1 ATOM 57 C C4 . DG A 1 3 ? 8.142 -2.765 -1.826 1.00 13.59 ? 3 DG A C4 1 ATOM 58 P P . DG A 1 4 ? 6.590 2.523 -6.089 1.00 50.54 ? 4 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 7.996 2.444 -6.537 1.00 45.33 ? 4 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 5.754 3.658 -6.583 1.00 46.17 ? 4 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 5.827 1.110 -6.451 1.00 41.24 ? 4 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 6.139 0.369 -7.609 1.00 30.04 ? 4 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 5.478 -0.996 -7.734 1.00 33.15 ? 4 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 5.846 -1.840 -6.614 1.00 28.17 ? 4 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 3.946 -1.092 -7.854 1.00 40.96 ? 4 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 3.442 -2.337 -8.462 1.00 43.09 ? 4 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 3.641 -1.200 -6.386 1.00 33.61 ? 4 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 4.632 -2.306 -6.011 1.00 35.78 ? 4 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 4.805 -2.519 -4.539 1.00 36.17 ? 4 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 4.793 -1.477 -3.627 1.00 34.95 ? 4 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 4.953 -1.834 -2.378 1.00 33.41 ? 4 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 5.064 -3.204 -2.445 1.00 28.72 ? 4 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 5.284 -4.064 -1.351 1.00 37.16 ? 4 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 5.399 -3.744 -0.137 1.00 42.16 ? 4 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 5.363 -5.393 -1.744 1.00 33.57 ? 4 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 5.255 -5.808 -3.038 1.00 33.05 ? 4 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 5.375 -7.151 -3.112 1.00 31.11 ? 4 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 5.056 -4.981 -4.102 1.00 33.29 ? 4 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 4.971 -3.671 -3.739 1.00 30.74 ? 4 DG A C4 1 ATOM 80 P P . DT A 1 5 ? 3.148 -2.600 -10.035 1.00 55.07 ? 5 DT A P 1 ATOM 81 O OP1 . DT A 1 5 ? 4.423 -2.497 -10.800 1.00 50.64 ? 5 DT A OP1 1 ATOM 82 O OP2 . DT A 1 5 ? 1.950 -1.825 -10.505 1.00 44.54 ? 5 DT A OP2 1 ATOM 83 O "O5'" . DT A 1 5 ? 2.806 -4.159 -9.951 1.00 51.46 ? 5 DT A "O5'" 1 ATOM 84 C "C5'" . DT A 1 5 ? 3.778 -5.080 -9.448 1.00 53.63 ? 5 DT A "C5'" 1 ATOM 85 C "C4'" . DT A 1 5 ? 3.153 -6.030 -8.437 1.00 56.07 ? 5 DT A "C4'" 1 ATOM 86 O "O4'" . DT A 1 5 ? 3.068 -5.426 -7.109 1.00 64.25 ? 5 DT A "O4'" 1 ATOM 87 C "C3'" . DT A 1 5 ? 1.721 -6.466 -8.711 1.00 57.50 ? 5 DT A "C3'" 1 ATOM 88 O "O3'" . DT A 1 5 ? 1.500 -7.747 -8.192 1.00 55.71 ? 5 DT A "O3'" 1 ATOM 89 C "C2'" . DT A 1 5 ? 0.902 -5.520 -7.836 1.00 66.11 ? 5 DT A "C2'" 1 ATOM 90 C "C1'" . DT A 1 5 ? 1.762 -5.706 -6.596 1.00 65.72 ? 5 DT A "C1'" 1 ATOM 91 N N1 . DT A 1 5 ? 1.462 -4.899 -5.326 1.00 67.73 ? 5 DT A N1 1 ATOM 92 C C2 . DT A 1 5 ? 1.622 -5.576 -4.117 1.00 68.17 ? 5 DT A C2 1 ATOM 93 O O2 . DT A 1 5 ? 1.848 -6.781 -4.040 1.00 76.92 ? 5 DT A O2 1 ATOM 94 N N3 . DT A 1 5 ? 1.510 -4.795 -2.982 1.00 70.98 ? 5 DT A N3 1 ATOM 95 C C4 . DT A 1 5 ? 1.246 -3.442 -2.951 1.00 64.97 ? 5 DT A C4 1 ATOM 96 O O4 . DT A 1 5 ? 1.185 -2.814 -1.896 1.00 72.96 ? 5 DT A O4 1 ATOM 97 C C5 . DT A 1 5 ? 1.087 -2.803 -4.245 1.00 65.81 ? 5 DT A C5 1 ATOM 98 C C7 . DT A 1 5 ? 0.801 -1.336 -4.301 1.00 73.52 ? 5 DT A C7 1 ATOM 99 C C6 . DT A 1 5 ? 1.202 -3.539 -5.363 1.00 66.78 ? 5 DT A C6 1 ATOM 100 P P . DA A 1 6 ? 0.291 -8.597 -8.825 1.00 58.33 ? 6 DA A P 1 ATOM 101 O OP1 . DA A 1 6 ? 0.907 -9.389 -9.920 1.00 57.20 ? 6 DA A OP1 1 ATOM 102 O OP2 . DA A 1 6 ? -0.825 -7.678 -9.165 1.00 55.51 ? 6 DA A OP2 1 ATOM 103 O "O5'" . DA A 1 6 ? -0.233 -9.611 -7.697 1.00 46.74 ? 6 DA A "O5'" 1 ATOM 104 C "C5'" . DA A 1 6 ? 0.617 -10.283 -6.795 1.00 50.50 ? 6 DA A "C5'" 1 ATOM 105 C "C4'" . DA A 1 6 ? -0.193 -10.568 -5.547 1.00 48.86 ? 6 DA A "C4'" 1 ATOM 106 O "O4'" . DA A 1 6 ? -0.403 -9.345 -4.802 1.00 47.87 ? 6 DA A "O4'" 1 ATOM 107 C "C3'" . DA A 1 6 ? -1.604 -11.045 -5.878 1.00 54.01 ? 6 DA A "C3'" 1 ATOM 108 O "O3'" . DA A 1 6 ? -1.878 -12.257 -5.141 1.00 54.22 ? 6 DA A "O3'" 1 ATOM 109 C "C2'" . DA A 1 6 ? -2.495 -9.827 -5.521 1.00 48.34 ? 6 DA A "C2'" 1 ATOM 110 C "C1'" . DA A 1 6 ? -1.723 -9.377 -4.306 1.00 39.45 ? 6 DA A "C1'" 1 ATOM 111 N N9 . DA A 1 6 ? -1.880 -8.041 -3.803 1.00 36.10 ? 6 DA A N9 1 ATOM 112 C C8 . DA A 1 6 ? -2.109 -6.917 -4.510 1.00 33.34 ? 6 DA A C8 1 ATOM 113 N N7 . DA A 1 6 ? -2.137 -5.854 -3.743 1.00 31.31 ? 6 DA A N7 1 ATOM 114 C C5 . DA A 1 6 ? -1.891 -6.325 -2.484 1.00 20.29 ? 6 DA A C5 1 ATOM 115 C C6 . DA A 1 6 ? -1.813 -5.673 -1.267 1.00 21.87 ? 6 DA A C6 1 ATOM 116 N N6 . DA A 1 6 ? -1.977 -4.349 -1.196 1.00 18.11 ? 6 DA A N6 1 ATOM 117 N N1 . DA A 1 6 ? -1.561 -6.414 -0.159 1.00 23.99 ? 6 DA A N1 1 ATOM 118 C C2 . DA A 1 6 ? -1.409 -7.744 -0.294 1.00 27.53 ? 6 DA A C2 1 ATOM 119 N N3 . DA A 1 6 ? -1.482 -8.455 -1.428 1.00 28.52 ? 6 DA A N3 1 ATOM 120 C C4 . DA A 1 6 ? -1.721 -7.669 -2.491 1.00 26.15 ? 6 DA A C4 1 ATOM 121 P P . DC A 1 7 ? -3.404 -12.724 -5.034 1.00 57.86 ? 7 DC A P 1 ATOM 122 O OP1 . DC A 1 7 ? -3.751 -13.534 -6.223 1.00 51.72 ? 7 DC A OP1 1 ATOM 123 O OP2 . DC A 1 7 ? -4.216 -11.515 -4.734 1.00 60.18 ? 7 DC A OP2 1 ATOM 124 O "O5'" . DC A 1 7 ? -3.453 -13.599 -3.700 1.00 53.96 ? 7 DC A "O5'" 1 ATOM 125 C "C5'" . DC A 1 7 ? -3.205 -12.932 -2.448 1.00 56.55 ? 7 DC A "C5'" 1 ATOM 126 C "C4'" . DC A 1 7 ? -4.388 -12.551 -1.557 1.00 52.85 ? 7 DC A "C4'" 1 ATOM 127 O "O4'" . DC A 1 7 ? -4.015 -11.320 -0.867 1.00 50.81 ? 7 DC A "O4'" 1 ATOM 128 C "C3'" . DC A 1 7 ? -5.739 -12.225 -2.196 1.00 54.78 ? 7 DC A "C3'" 1 ATOM 129 O "O3'" . DC A 1 7 ? -6.634 -13.344 -2.381 1.00 60.10 ? 7 DC A "O3'" 1 ATOM 130 C "C2'" . DC A 1 7 ? -6.350 -11.200 -1.254 1.00 47.18 ? 7 DC A "C2'" 1 ATOM 131 C "C1'" . DC A 1 7 ? -5.171 -10.593 -0.500 1.00 41.20 ? 7 DC A "C1'" 1 ATOM 132 N N1 . DC A 1 7 ? -5.035 -9.168 -0.830 1.00 28.74 ? 7 DC A N1 1 ATOM 133 C C2 . DC A 1 7 ? -4.959 -8.210 0.209 1.00 30.01 ? 7 DC A C2 1 ATOM 134 O O2 . DC A 1 7 ? -4.993 -8.553 1.402 1.00 19.27 ? 7 DC A O2 1 ATOM 135 N N3 . DC A 1 7 ? -4.856 -6.885 -0.104 1.00 24.18 ? 7 DC A N3 1 ATOM 136 C C4 . DC A 1 7 ? -4.847 -6.540 -1.401 1.00 33.54 ? 7 DC A C4 1 ATOM 137 N N4 . DC A 1 7 ? -4.750 -5.233 -1.668 1.00 26.99 ? 7 DC A N4 1 ATOM 138 C C5 . DC A 1 7 ? -4.932 -7.508 -2.475 1.00 29.84 ? 7 DC A C5 1 ATOM 139 C C6 . DC A 1 7 ? -5.019 -8.797 -2.139 1.00 31.36 ? 7 DC A C6 1 ATOM 140 P P . DC A 1 8 ? -7.168 -14.494 -1.376 1.00 63.13 ? 8 DC A P 1 ATOM 141 O OP1 . DC A 1 8 ? -6.430 -15.691 -1.876 1.00 61.57 ? 8 DC A OP1 1 ATOM 142 O OP2 . DC A 1 8 ? -8.657 -14.499 -1.511 1.00 61.17 ? 8 DC A OP2 1 ATOM 143 O "O5'" . DC A 1 8 ? -6.824 -14.209 0.195 1.00 60.17 ? 8 DC A "O5'" 1 ATOM 144 C "C5'" . DC A 1 8 ? -6.350 -13.003 0.850 1.00 56.27 ? 8 DC A "C5'" 1 ATOM 145 C "C4'" . DC A 1 8 ? -6.807 -12.795 2.298 1.00 62.74 ? 8 DC A "C4'" 1 ATOM 146 O "O4'" . DC A 1 8 ? -6.923 -11.384 2.680 1.00 58.52 ? 8 DC A "O4'" 1 ATOM 147 C "C3'" . DC A 1 8 ? -8.196 -13.285 2.626 1.00 60.82 ? 8 DC A "C3'" 1 ATOM 148 O "O3'" . DC A 1 8 ? -8.372 -13.238 4.038 1.00 61.79 ? 8 DC A "O3'" 1 ATOM 149 C "C2'" . DC A 1 8 ? -8.983 -12.150 2.001 1.00 57.70 ? 8 DC A "C2'" 1 ATOM 150 C "C1'" . DC A 1 8 ? -8.289 -10.988 2.710 1.00 55.23 ? 8 DC A "C1'" 1 ATOM 151 N N1 . DC A 1 8 ? -8.446 -9.769 1.922 1.00 48.95 ? 8 DC A N1 1 ATOM 152 C C2 . DC A 1 8 ? -8.621 -8.486 2.468 1.00 47.25 ? 8 DC A C2 1 ATOM 153 O O2 . DC A 1 8 ? -8.655 -8.309 3.693 1.00 47.17 ? 8 DC A O2 1 ATOM 154 N N3 . DC A 1 8 ? -8.745 -7.452 1.592 1.00 42.96 ? 8 DC A N3 1 ATOM 155 C C4 . DC A 1 8 ? -8.703 -7.672 0.259 1.00 42.57 ? 8 DC A C4 1 ATOM 156 N N4 . DC A 1 8 ? -8.827 -6.674 -0.621 1.00 39.27 ? 8 DC A N4 1 ATOM 157 C C5 . DC A 1 8 ? -8.526 -8.964 -0.279 1.00 44.26 ? 8 DC A C5 1 ATOM 158 C C6 . DC A 1 8 ? -8.413 -9.959 0.582 1.00 43.62 ? 8 DC A C6 1 ATOM 159 P P . DG A 1 9 ? -9.877 -13.325 4.591 1.00 58.43 ? 9 DG A P 1 ATOM 160 O OP1 . DG A 1 9 ? -10.279 -14.745 4.765 1.00 59.51 ? 9 DG A OP1 1 ATOM 161 O OP2 . DG A 1 9 ? -10.749 -12.518 3.710 1.00 56.49 ? 9 DG A OP2 1 ATOM 162 O "O5'" . DG A 1 9 ? -9.662 -12.634 6.015 1.00 51.56 ? 9 DG A "O5'" 1 ATOM 163 C "C5'" . DG A 1 9 ? -10.750 -12.408 6.852 1.00 43.62 ? 9 DG A "C5'" 1 ATOM 164 C "C4'" . DG A 1 9 ? -11.683 -11.355 6.271 1.00 47.52 ? 9 DG A "C4'" 1 ATOM 165 O "O4'" . DG A 1 9 ? -11.251 -10.606 5.062 1.00 47.72 ? 9 DG A "O4'" 1 ATOM 166 C "C3'" . DG A 1 9 ? -13.032 -11.968 5.923 1.00 47.59 ? 9 DG A "C3'" 1 ATOM 167 O "O3'" . DG A 1 9 ? -13.813 -11.630 7.021 1.00 49.32 ? 9 DG A "O3'" 1 ATOM 168 C "C2'" . DG A 1 9 ? -13.465 -11.297 4.599 1.00 47.35 ? 9 DG A "C2'" 1 ATOM 169 C "C1'" . DG A 1 9 ? -12.448 -10.149 4.429 1.00 37.17 ? 9 DG A "C1'" 1 ATOM 170 N N9 . DG A 1 9 ? -12.342 -9.556 3.024 1.00 28.74 ? 9 DG A N9 1 ATOM 171 C C8 . DG A 1 9 ? -12.423 -10.254 1.812 1.00 23.05 ? 9 DG A C8 1 ATOM 172 N N7 . DG A 1 9 ? -12.334 -9.496 0.753 1.00 18.18 ? 9 DG A N7 1 ATOM 173 C C5 . DG A 1 9 ? -12.177 -8.190 1.326 1.00 21.89 ? 9 DG A C5 1 ATOM 174 C C6 . DG A 1 9 ? -12.020 -6.900 0.724 1.00 21.52 ? 9 DG A C6 1 ATOM 175 O O6 . DG A 1 9 ? -11.969 -6.588 -0.470 1.00 24.66 ? 9 DG A O6 1 ATOM 176 N N1 . DG A 1 9 ? -11.913 -5.847 1.623 1.00 14.31 ? 9 DG A N1 1 ATOM 177 C C2 . DG A 1 9 ? -11.936 -5.942 2.995 1.00 19.61 ? 9 DG A C2 1 ATOM 178 N N2 . DG A 1 9 ? -11.806 -4.756 3.682 1.00 17.21 ? 9 DG A N2 1 ATOM 179 N N3 . DG A 1 9 ? -12.092 -7.123 3.592 1.00 17.60 ? 9 DG A N3 1 ATOM 180 C C4 . DG A 1 9 ? -12.195 -8.191 2.714 1.00 21.15 ? 9 DG A C4 1 ATOM 181 P P . DG A 1 10 ? -14.415 -10.142 7.201 1.00 56.56 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? -14.329 -9.817 8.646 1.00 53.96 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? -15.736 -10.297 6.534 1.00 56.46 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? -13.571 -8.999 6.424 1.00 50.25 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? -13.040 -7.827 7.153 1.00 56.61 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? -13.966 -6.775 7.777 1.00 51.96 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? -14.460 -5.851 6.763 1.00 46.55 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? -15.203 -7.299 8.499 1.00 48.68 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? -15.384 -6.670 9.805 1.00 50.40 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? -16.286 -7.276 7.414 1.00 43.52 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? -15.813 -6.163 6.448 1.00 42.32 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? -15.538 -6.960 4.965 1.00 37.31 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? -15.512 -8.305 4.602 1.00 41.45 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? -15.356 -8.595 3.327 1.00 33.70 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? -15.276 -7.335 2.782 1.00 28.98 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? -15.107 -6.984 1.440 1.00 30.93 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? -14.982 -7.781 0.506 1.00 29.84 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? -15.075 -5.594 1.246 1.00 32.12 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? -15.191 -4.649 2.284 1.00 36.74 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? -15.156 -3.307 2.031 1.00 26.02 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? -15.347 -5.010 3.556 1.00 33.19 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? -15.389 -6.346 3.737 1.00 34.91 ? 10 DG A C4 1 ATOM 203 O "O5'" . DC B 1 1 ? -17.685 -2.305 -6.229 1.00 42.26 ? 1 DC B "O5'" 1 ATOM 204 C "C5'" . DC B 1 1 ? -17.817 -1.501 -4.982 1.00 41.25 ? 1 DC B "C5'" 1 ATOM 205 C "C4'" . DC B 1 1 ? -16.795 -0.394 -4.599 1.00 45.45 ? 1 DC B "C4'" 1 ATOM 206 O "O4'" . DC B 1 1 ? -16.135 -0.740 -3.345 1.00 43.95 ? 1 DC B "O4'" 1 ATOM 207 C "C3'" . DC B 1 1 ? -15.577 0.002 -5.466 1.00 49.29 ? 1 DC B "C3'" 1 ATOM 208 O "O3'" . DC B 1 1 ? -15.139 1.352 -5.136 1.00 44.94 ? 1 DC B "O3'" 1 ATOM 209 C "C2'" . DC B 1 1 ? -14.498 -1.017 -5.091 1.00 35.47 ? 1 DC B "C2'" 1 ATOM 210 C "C1'" . DC B 1 1 ? -14.755 -1.108 -3.584 1.00 44.67 ? 1 DC B "C1'" 1 ATOM 211 N N1 . DC B 1 1 ? -14.588 -2.472 -3.068 1.00 39.60 ? 1 DC B N1 1 ATOM 212 C C2 . DC B 1 1 ? -14.562 -2.762 -1.692 1.00 45.13 ? 1 DC B C2 1 ATOM 213 O O2 . DC B 1 1 ? -14.623 -1.830 -0.865 1.00 46.82 ? 1 DC B O2 1 ATOM 214 N N3 . DC B 1 1 ? -14.477 -4.073 -1.309 1.00 41.03 ? 1 DC B N3 1 ATOM 215 C C4 . DC B 1 1 ? -14.415 -5.033 -2.246 1.00 43.90 ? 1 DC B C4 1 ATOM 216 N N4 . DC B 1 1 ? -14.335 -6.311 -1.825 1.00 43.35 ? 1 DC B N4 1 ATOM 217 C C5 . DC B 1 1 ? -14.442 -4.744 -3.654 1.00 41.88 ? 1 DC B C5 1 ATOM 218 C C6 . DC B 1 1 ? -14.536 -3.459 -4.007 1.00 40.73 ? 1 DC B C6 1 ATOM 219 P P . DC B 1 2 ? -13.577 1.711 -4.985 1.00 50.83 ? 2 DC B P 1 ATOM 220 O OP1 . DC B 1 2 ? -13.329 3.185 -5.058 1.00 47.58 ? 2 DC B OP1 1 ATOM 221 O OP2 . DC B 1 2 ? -12.931 0.921 -6.047 1.00 51.24 ? 2 DC B OP2 1 ATOM 222 O "O5'" . DC B 1 2 ? -13.168 1.108 -3.520 1.00 50.18 ? 2 DC B "O5'" 1 ATOM 223 C "C5'" . DC B 1 2 ? -13.738 1.451 -2.173 1.00 46.69 ? 2 DC B "C5'" 1 ATOM 224 C "C4'" . DC B 1 2 ? -12.770 1.998 -1.099 1.00 45.33 ? 2 DC B "C4'" 1 ATOM 225 O "O4'" . DC B 1 2 ? -12.584 1.076 0.016 1.00 45.86 ? 2 DC B "O4'" 1 ATOM 226 C "C3'" . DC B 1 2 ? -11.364 2.355 -1.562 1.00 48.77 ? 2 DC B "C3'" 1 ATOM 227 O "O3'" . DC B 1 2 ? -11.075 3.689 -1.255 1.00 47.44 ? 2 DC B "O3'" 1 ATOM 228 C "C2'" . DC B 1 2 ? -10.416 1.442 -0.776 1.00 39.82 ? 2 DC B "C2'" 1 ATOM 229 C "C1'" . DC B 1 2 ? -11.219 0.785 0.333 1.00 35.49 ? 2 DC B "C1'" 1 ATOM 230 N N1 . DC B 1 2 ? -11.093 -0.659 0.116 1.00 33.78 ? 2 DC B N1 1 ATOM 231 C C2 . DC B 1 2 ? -10.970 -1.765 1.010 1.00 37.14 ? 2 DC B C2 1 ATOM 232 O O2 . DC B 1 2 ? -10.935 -1.664 2.258 1.00 42.89 ? 2 DC B O2 1 ATOM 233 N N3 . DC B 1 2 ? -10.896 -2.993 0.430 1.00 38.24 ? 2 DC B N3 1 ATOM 234 C C4 . DC B 1 2 ? -10.949 -3.109 -0.897 1.00 32.76 ? 2 DC B C4 1 ATOM 235 N N4 . DC B 1 2 ? -10.876 -4.326 -1.437 1.00 36.28 ? 2 DC B N4 1 ATOM 236 C C5 . DC B 1 2 ? -11.079 -2.003 -1.776 1.00 36.43 ? 2 DC B C5 1 ATOM 237 C C6 . DC B 1 2 ? -11.145 -0.827 -1.214 1.00 30.77 ? 2 DC B C6 1 ATOM 238 P P . DG B 1 3 ? -9.704 3.928 -0.457 1.00 53.57 ? 3 DG B P 1 ATOM 239 O OP1 . DG B 1 3 ? -9.582 5.401 -0.360 1.00 54.08 ? 3 DG B OP1 1 ATOM 240 O OP2 . DG B 1 3 ? -8.627 3.229 -1.199 1.00 52.64 ? 3 DG B OP2 1 ATOM 241 O "O5'" . DG B 1 3 ? -9.891 3.229 1.018 1.00 48.80 ? 3 DG B "O5'" 1 ATOM 242 C "C5'" . DG B 1 3 ? -8.966 3.521 2.116 1.00 52.65 ? 3 DG B "C5'" 1 ATOM 243 C "C4'" . DG B 1 3 ? -8.762 2.532 3.289 1.00 45.62 ? 3 DG B "C4'" 1 ATOM 244 O "O4'" . DG B 1 3 ? -8.966 1.134 2.911 1.00 42.35 ? 3 DG B "O4'" 1 ATOM 245 C "C3'" . DG B 1 3 ? -7.337 2.589 3.890 1.00 42.41 ? 3 DG B "C3'" 1 ATOM 246 O "O3'" . DG B 1 3 ? -7.313 2.631 5.366 1.00 48.86 ? 3 DG B "O3'" 1 ATOM 247 C "C2'" . DG B 1 3 ? -6.707 1.324 3.286 1.00 46.10 ? 3 DG B "C2'" 1 ATOM 248 C "C1'" . DG B 1 3 ? -7.861 0.323 3.293 1.00 31.74 ? 3 DG B "C1'" 1 ATOM 249 N N9 . DG B 1 3 ? -7.866 -0.708 2.274 1.00 24.82 ? 3 DG B N9 1 ATOM 250 C C8 . DG B 1 3 ? -7.897 -0.449 0.931 1.00 28.70 ? 3 DG B C8 1 ATOM 251 N N7 . DG B 1 3 ? -7.950 -1.510 0.166 1.00 26.02 ? 3 DG B N7 1 ATOM 252 C C5 . DG B 1 3 ? -7.951 -2.559 1.069 1.00 21.18 ? 3 DG B C5 1 ATOM 253 C C6 . DG B 1 3 ? -8.009 -3.953 0.798 1.00 21.67 ? 3 DG B C6 1 ATOM 254 O O6 . DG B 1 3 ? -8.049 -4.456 -0.353 1.00 20.39 ? 3 DG B O6 1 ATOM 255 N N1 . DG B 1 3 ? -7.972 -4.734 1.972 1.00 13.34 ? 3 DG B N1 1 ATOM 256 C C2 . DG B 1 3 ? -7.934 -4.172 3.235 1.00 20.27 ? 3 DG B C2 1 ATOM 257 N N2 . DG B 1 3 ? -7.947 -5.039 4.270 1.00 24.14 ? 3 DG B N2 1 ATOM 258 N N3 . DG B 1 3 ? -7.903 -2.843 3.493 1.00 23.35 ? 3 DG B N3 1 ATOM 259 C C4 . DG B 1 3 ? -7.916 -2.083 2.370 1.00 22.41 ? 3 DG B C4 1 ATOM 260 P P . DG B 1 4 ? -5.991 2.833 6.307 1.00 55.51 ? 4 DG B P 1 ATOM 261 O OP1 . DG B 1 4 ? -6.393 3.796 7.382 1.00 48.67 ? 4 DG B OP1 1 ATOM 262 O OP2 . DG B 1 4 ? -4.895 3.182 5.359 1.00 54.07 ? 4 DG B OP2 1 ATOM 263 O "O5'" . DG B 1 4 ? -5.613 1.406 7.008 1.00 45.38 ? 4 DG B "O5'" 1 ATOM 264 C "C5'" . DG B 1 4 ? -6.608 0.388 7.203 1.00 33.63 ? 4 DG B "C5'" 1 ATOM 265 C "C4'" . DG B 1 4 ? -6.106 -1.014 7.515 1.00 27.97 ? 4 DG B "C4'" 1 ATOM 266 O "O4'" . DG B 1 4 ? -6.208 -1.834 6.327 1.00 31.58 ? 4 DG B "O4'" 1 ATOM 267 C "C3'" . DG B 1 4 ? -4.640 -1.127 7.900 1.00 36.20 ? 4 DG B "C3'" 1 ATOM 268 O "O3'" . DG B 1 4 ? -4.309 -2.197 8.804 1.00 29.77 ? 4 DG B "O3'" 1 ATOM 269 C "C2'" . DG B 1 4 ? -3.932 -1.363 6.564 1.00 30.59 ? 4 DG B "C2'" 1 ATOM 270 C "C1'" . DG B 1 4 ? -4.912 -2.347 5.954 1.00 24.16 ? 4 DG B "C1'" 1 ATOM 271 N N9 . DG B 1 4 ? -4.847 -2.431 4.491 1.00 14.03 ? 4 DG B N9 1 ATOM 272 C C8 . DG B 1 4 ? -4.825 -1.340 3.649 1.00 11.73 ? 4 DG B C8 1 ATOM 273 N N7 . DG B 1 4 ? -4.808 -1.664 2.398 1.00 7.83 ? 4 DG B N7 1 ATOM 274 C C5 . DG B 1 4 ? -4.803 -3.039 2.404 1.00 2.00 ? 4 DG B C5 1 ATOM 275 C C6 . DG B 1 4 ? -4.790 -3.893 1.287 1.00 10.21 ? 4 DG B C6 1 ATOM 276 O O6 . DG B 1 4 ? -4.779 -3.495 0.084 1.00 18.40 ? 4 DG B O6 1 ATOM 277 N N1 . DG B 1 4 ? -4.791 -5.265 1.606 1.00 2.00 ? 4 DG B N1 1 ATOM 278 C C2 . DG B 1 4 ? -4.799 -5.690 2.910 1.00 2.00 ? 4 DG B C2 1 ATOM 279 N N2 . DG B 1 4 ? -4.799 -7.068 3.019 1.00 2.00 ? 4 DG B N2 1 ATOM 280 N N3 . DG B 1 4 ? -4.819 -4.805 3.960 1.00 2.00 ? 4 DG B N3 1 ATOM 281 C C4 . DG B 1 4 ? -4.821 -3.530 3.643 1.00 2.00 ? 4 DG B C4 1 ATOM 282 P P . DT B 1 5 ? -2.754 -2.131 9.206 1.00 37.35 ? 5 DT B P 1 ATOM 283 O OP1 . DT B 1 5 ? -2.576 -2.254 10.668 1.00 33.18 ? 5 DT B OP1 1 ATOM 284 O OP2 . DT B 1 5 ? -2.062 -0.928 8.612 1.00 32.30 ? 5 DT B OP2 1 ATOM 285 O "O5'" . DT B 1 5 ? -2.389 -3.493 8.463 1.00 26.30 ? 5 DT B "O5'" 1 ATOM 286 C "C5'" . DT B 1 5 ? -2.699 -4.699 9.138 1.00 27.23 ? 5 DT B "C5'" 1 ATOM 287 C "C4'" . DT B 1 5 ? -3.026 -5.647 8.048 1.00 24.03 ? 5 DT B "C4'" 1 ATOM 288 O "O4'" . DT B 1 5 ? -2.494 -4.920 6.905 1.00 28.62 ? 5 DT B "O4'" 1 ATOM 289 C "C3'" . DT B 1 5 ? -2.147 -6.871 7.852 1.00 24.67 ? 5 DT B "C3'" 1 ATOM 290 O "O3'" . DT B 1 5 ? -2.198 -7.893 8.699 1.00 20.15 ? 5 DT B "O3'" 1 ATOM 291 C "C2'" . DT B 1 5 ? -2.246 -7.293 6.389 1.00 27.76 ? 5 DT B "C2'" 1 ATOM 292 C "C1'" . DT B 1 5 ? -2.552 -5.886 5.827 1.00 32.48 ? 5 DT B "C1'" 1 ATOM 293 N N1 . DT B 1 5 ? -1.964 -5.412 4.473 1.00 21.10 ? 5 DT B N1 1 ATOM 294 C C2 . DT B 1 5 ? -1.649 -6.267 3.410 1.00 26.96 ? 5 DT B C2 1 ATOM 295 O O2 . DT B 1 5 ? -1.700 -7.497 3.374 1.00 23.55 ? 5 DT B O2 1 ATOM 296 N N3 . DT B 1 5 ? -1.227 -5.588 2.305 1.00 20.70 ? 5 DT B N3 1 ATOM 297 C C4 . DT B 1 5 ? -1.096 -4.224 2.152 1.00 24.52 ? 5 DT B C4 1 ATOM 298 O O4 . DT B 1 5 ? -0.697 -3.737 1.114 1.00 26.10 ? 5 DT B O4 1 ATOM 299 C C5 . DT B 1 5 ? -1.430 -3.420 3.263 1.00 20.89 ? 5 DT B C5 1 ATOM 300 C C7 . DT B 1 5 ? -1.301 -1.934 3.205 1.00 22.29 ? 5 DT B C7 1 ATOM 301 C C6 . DT B 1 5 ? -1.854 -4.047 4.344 1.00 24.84 ? 5 DT B C6 1 ATOM 302 P P . DA B 1 6 ? -0.607 -7.952 9.080 1.00 37.23 ? 6 DA B P 1 ATOM 303 O OP1 . DA B 1 6 ? -0.610 -8.313 10.519 1.00 35.04 ? 6 DA B OP1 1 ATOM 304 O OP2 . DA B 1 6 ? 0.149 -6.678 8.764 1.00 33.89 ? 6 DA B OP2 1 ATOM 305 O "O5'" . DA B 1 6 ? 0.113 -8.962 8.034 1.00 29.37 ? 6 DA B "O5'" 1 ATOM 306 C "C5'" . DA B 1 6 ? -0.125 -10.331 7.800 1.00 31.66 ? 6 DA B "C5'" 1 ATOM 307 C "C4'" . DA B 1 6 ? 0.379 -10.692 6.414 1.00 31.79 ? 6 DA B "C4'" 1 ATOM 308 O "O4'" . DA B 1 6 ? 0.407 -9.510 5.581 1.00 36.69 ? 6 DA B "O4'" 1 ATOM 309 C "C3'" . DA B 1 6 ? 1.819 -11.173 6.303 1.00 45.86 ? 6 DA B "C3'" 1 ATOM 310 O "O3'" . DA B 1 6 ? 1.806 -12.613 6.249 1.00 53.44 ? 6 DA B "O3'" 1 ATOM 311 C "C2'" . DA B 1 6 ? 2.427 -10.497 5.034 1.00 39.29 ? 6 DA B "C2'" 1 ATOM 312 C "C1'" . DA B 1 6 ? 1.262 -9.728 4.450 1.00 31.25 ? 6 DA B "C1'" 1 ATOM 313 N N9 . DA B 1 6 ? 1.493 -8.411 3.833 1.00 29.08 ? 6 DA B N9 1 ATOM 314 C C8 . DA B 1 6 ? 1.439 -7.221 4.508 1.00 22.73 ? 6 DA B C8 1 ATOM 315 N N7 . DA B 1 6 ? 1.588 -6.158 3.760 1.00 21.87 ? 6 DA B N7 1 ATOM 316 C C5 . DA B 1 6 ? 1.718 -6.668 2.488 1.00 15.64 ? 6 DA B C5 1 ATOM 317 C C6 . DA B 1 6 ? 1.904 -6.000 1.283 1.00 13.32 ? 6 DA B C6 1 ATOM 318 N N6 . DA B 1 6 ? 1.998 -4.666 1.194 1.00 12.78 ? 6 DA B N6 1 ATOM 319 N N1 . DA B 1 6 ? 1.978 -6.767 0.184 1.00 17.71 ? 6 DA B N1 1 ATOM 320 C C2 . DA B 1 6 ? 1.893 -8.113 0.285 1.00 18.55 ? 6 DA B C2 1 ATOM 321 N N3 . DA B 1 6 ? 1.736 -8.857 1.388 1.00 24.07 ? 6 DA B N3 1 ATOM 322 C C4 . DA B 1 6 ? 1.633 -8.062 2.484 1.00 22.15 ? 6 DA B C4 1 ATOM 323 P P . DC B 1 7 ? 3.165 -13.490 6.181 1.00 60.07 ? 7 DC B P 1 ATOM 324 O OP1 . DC B 1 7 ? 3.242 -14.309 7.417 1.00 52.08 ? 7 DC B OP1 1 ATOM 325 O OP2 . DC B 1 7 ? 4.321 -12.646 5.790 1.00 55.02 ? 7 DC B OP2 1 ATOM 326 O "O5'" . DC B 1 7 ? 2.851 -14.395 4.896 1.00 55.22 ? 7 DC B "O5'" 1 ATOM 327 C "C5'" . DC B 1 7 ? 2.584 -13.783 3.659 1.00 49.85 ? 7 DC B "C5'" 1 ATOM 328 C "C4'" . DC B 1 7 ? 3.838 -13.508 2.841 1.00 59.22 ? 7 DC B "C4'" 1 ATOM 329 O "O4'" . DC B 1 7 ? 3.953 -12.080 2.637 1.00 57.64 ? 7 DC B "O4'" 1 ATOM 330 C "C3'" . DC B 1 7 ? 5.243 -13.924 3.293 1.00 61.47 ? 7 DC B "C3'" 1 ATOM 331 O "O3'" . DC B 1 7 ? 5.608 -15.000 2.457 1.00 60.62 ? 7 DC B "O3'" 1 ATOM 332 C "C2'" . DC B 1 7 ? 6.094 -12.674 3.017 1.00 53.12 ? 7 DC B "C2'" 1 ATOM 333 C "C1'" . DC B 1 7 ? 5.216 -11.960 1.985 1.00 63.53 ? 7 DC B "C1'" 1 ATOM 334 N N1 . DC B 1 7 ? 5.469 -10.414 1.735 1.00 50.87 ? 7 DC B N1 1 ATOM 335 C C2 . DC B 1 7 ? 5.811 -9.682 0.519 1.00 57.17 ? 7 DC B C2 1 ATOM 336 O O2 . DC B 1 7 ? 6.097 -10.174 -0.592 1.00 50.10 ? 7 DC B O2 1 ATOM 337 N N3 . DC B 1 7 ? 5.760 -8.294 0.639 1.00 59.02 ? 7 DC B N3 1 ATOM 338 C C4 . DC B 1 7 ? 5.404 -7.688 1.812 1.00 60.39 ? 7 DC B C4 1 ATOM 339 N N4 . DC B 1 7 ? 5.392 -6.331 1.863 1.00 51.35 ? 7 DC B N4 1 ATOM 340 C C5 . DC B 1 7 ? 5.003 -8.425 3.011 1.00 52.45 ? 7 DC B C5 1 ATOM 341 C C6 . DC B 1 7 ? 5.039 -9.756 2.891 1.00 62.31 ? 7 DC B C6 1 ATOM 342 P P . DC B 1 8 ? 7.107 -15.507 2.172 1.00 67.97 ? 8 DC B P 1 ATOM 343 O OP1 . DC B 1 8 ? 6.953 -16.964 2.383 1.00 69.58 ? 8 DC B OP1 1 ATOM 344 O OP2 . DC B 1 8 ? 8.126 -14.799 3.010 1.00 68.46 ? 8 DC B OP2 1 ATOM 345 O "O5'" . DC B 1 8 ? 7.365 -15.187 0.580 1.00 66.64 ? 8 DC B "O5'" 1 ATOM 346 C "C5'" . DC B 1 8 ? 6.837 -14.017 -0.193 1.00 61.14 ? 8 DC B "C5'" 1 ATOM 347 C "C4'" . DC B 1 8 ? 7.309 -13.768 -1.655 1.00 57.53 ? 8 DC B "C4'" 1 ATOM 348 O "O4'" . DC B 1 8 ? 7.408 -12.338 -1.942 1.00 58.13 ? 8 DC B "O4'" 1 ATOM 349 C "C3'" . DC B 1 8 ? 8.689 -14.231 -2.137 1.00 61.72 ? 8 DC B "C3'" 1 ATOM 350 O "O3'" . DC B 1 8 ? 8.815 -14.082 -3.570 1.00 65.45 ? 8 DC B "O3'" 1 ATOM 351 C "C2'" . DC B 1 8 ? 9.548 -13.153 -1.520 1.00 59.55 ? 8 DC B "C2'" 1 ATOM 352 C "C1'" . DC B 1 8 ? 8.790 -11.955 -2.094 1.00 61.92 ? 8 DC B "C1'" 1 ATOM 353 N N1 . DC B 1 8 ? 8.991 -10.687 -1.327 1.00 54.88 ? 8 DC B N1 1 ATOM 354 C C2 . DC B 1 8 ? 8.904 -9.384 -1.896 1.00 52.11 ? 8 DC B C2 1 ATOM 355 O O2 . DC B 1 8 ? 8.709 -9.201 -3.118 1.00 47.81 ? 8 DC B O2 1 ATOM 356 N N3 . DC B 1 8 ? 9.056 -8.323 -1.067 1.00 45.60 ? 8 DC B N3 1 ATOM 357 C C4 . DC B 1 8 ? 9.262 -8.552 0.221 1.00 48.42 ? 8 DC B C4 1 ATOM 358 N N4 . DC B 1 8 ? 9.380 -7.466 0.973 1.00 50.75 ? 8 DC B N4 1 ATOM 359 C C5 . DC B 1 8 ? 9.364 -9.844 0.827 1.00 44.43 ? 8 DC B C5 1 ATOM 360 C C6 . DC B 1 8 ? 9.210 -10.875 0.007 1.00 50.03 ? 8 DC B C6 1 ATOM 361 P P . DG B 1 9 ? 10.004 -14.806 -4.383 1.00 69.05 ? 9 DG B P 1 ATOM 362 O OP1 . DG B 1 9 ? 9.604 -16.242 -4.545 1.00 64.13 ? 9 DG B OP1 1 ATOM 363 O OP2 . DG B 1 9 ? 11.246 -14.428 -3.664 1.00 65.61 ? 9 DG B OP2 1 ATOM 364 O "O5'" . DG B 1 9 ? 10.073 -14.179 -5.870 1.00 61.70 ? 9 DG B "O5'" 1 ATOM 365 C "C5'" . DG B 1 9 ? 9.752 -12.825 -6.200 1.00 58.39 ? 9 DG B "C5'" 1 ATOM 366 C "C4'" . DG B 1 9 ? 10.894 -11.882 -5.872 1.00 51.18 ? 9 DG B "C4'" 1 ATOM 367 O "O4'" . DG B 1 9 ? 10.922 -11.716 -4.427 1.00 46.07 ? 9 DG B "O4'" 1 ATOM 368 C "C3'" . DG B 1 9 ? 12.292 -12.376 -6.278 1.00 52.06 ? 9 DG B "C3'" 1 ATOM 369 O "O3'" . DG B 1 9 ? 13.086 -11.467 -7.152 1.00 62.12 ? 9 DG B "O3'" 1 ATOM 370 C "C2'" . DG B 1 9 ? 12.984 -12.611 -4.920 1.00 46.07 ? 9 DG B "C2'" 1 ATOM 371 C "C1'" . DG B 1 9 ? 12.283 -11.500 -4.155 1.00 36.77 ? 9 DG B "C1'" 1 ATOM 372 N N9 . DG B 1 9 ? 12.493 -11.196 -2.729 1.00 26.03 ? 9 DG B N9 1 ATOM 373 C C8 . DG B 1 9 ? 12.728 -11.955 -1.571 1.00 18.31 ? 9 DG B C8 1 ATOM 374 N N7 . DG B 1 9 ? 12.836 -11.284 -0.429 1.00 9.00 ? 9 DG B N7 1 ATOM 375 C C5 . DG B 1 9 ? 12.664 -9.997 -0.935 1.00 16.21 ? 9 DG B C5 1 ATOM 376 C C6 . DG B 1 9 ? 12.699 -8.782 -0.294 1.00 16.25 ? 9 DG B C6 1 ATOM 377 O O6 . DG B 1 9 ? 12.895 -8.705 0.900 1.00 23.94 ? 9 DG B O6 1 ATOM 378 N N1 . DG B 1 9 ? 12.487 -7.653 -1.079 1.00 11.89 ? 9 DG B N1 1 ATOM 379 C C2 . DG B 1 9 ? 12.279 -7.721 -2.449 1.00 21.61 ? 9 DG B C2 1 ATOM 380 N N2 . DG B 1 9 ? 12.077 -6.608 -3.220 1.00 23.96 ? 9 DG B N2 1 ATOM 381 N N3 . DG B 1 9 ? 12.277 -8.860 -3.103 1.00 17.90 ? 9 DG B N3 1 ATOM 382 C C4 . DG B 1 9 ? 12.460 -9.917 -2.285 1.00 20.07 ? 9 DG B C4 1 ATOM 383 P P . DG B 1 10 ? 12.629 -10.219 -8.125 1.00 70.08 ? 10 DG B P 1 ATOM 384 O OP1 . DG B 1 10 ? 11.653 -9.368 -7.386 1.00 71.17 ? 10 DG B OP1 1 ATOM 385 O OP2 . DG B 1 10 ? 12.297 -10.693 -9.513 1.00 68.30 ? 10 DG B OP2 1 ATOM 386 O "O5'" . DG B 1 10 ? 14.019 -9.422 -8.275 1.00 61.21 ? 10 DG B "O5'" 1 ATOM 387 C "C5'" . DG B 1 10 ? 14.258 -8.320 -7.430 1.00 54.13 ? 10 DG B "C5'" 1 ATOM 388 C "C4'" . DG B 1 10 ? 14.443 -7.066 -8.265 1.00 50.12 ? 10 DG B "C4'" 1 ATOM 389 O "O4'" . DG B 1 10 ? 14.309 -5.816 -7.505 1.00 45.53 ? 10 DG B "O4'" 1 ATOM 390 C "C3'" . DG B 1 10 ? 15.829 -7.017 -8.861 1.00 45.74 ? 10 DG B "C3'" 1 ATOM 391 O "O3'" . DG B 1 10 ? 15.693 -6.475 -10.172 1.00 46.31 ? 10 DG B "O3'" 1 ATOM 392 C "C2'" . DG B 1 10 ? 16.596 -6.128 -7.865 1.00 43.17 ? 10 DG B "C2'" 1 ATOM 393 C "C1'" . DG B 1 10 ? 15.558 -5.447 -6.949 1.00 38.05 ? 10 DG B "C1'" 1 ATOM 394 N N9 . DG B 1 10 ? 15.568 -5.929 -5.562 1.00 27.42 ? 10 DG B N9 1 ATOM 395 C C8 . DG B 1 10 ? 15.616 -7.263 -5.239 1.00 27.77 ? 10 DG B C8 1 ATOM 396 N N7 . DG B 1 10 ? 15.622 -7.530 -3.968 1.00 22.27 ? 10 DG B N7 1 ATOM 397 C C5 . DG B 1 10 ? 15.586 -6.288 -3.402 1.00 17.69 ? 10 DG B C5 1 ATOM 398 C C6 . DG B 1 10 ? 15.548 -6.034 -2.034 1.00 26.18 ? 10 DG B C6 1 ATOM 399 O O6 . DG B 1 10 ? 15.569 -6.893 -1.135 1.00 28.64 ? 10 DG B O6 1 ATOM 400 N N1 . DG B 1 10 ? 15.496 -4.670 -1.758 1.00 22.00 ? 10 DG B N1 1 ATOM 401 C C2 . DG B 1 10 ? 15.491 -3.666 -2.713 1.00 24.40 ? 10 DG B C2 1 ATOM 402 N N2 . DG B 1 10 ? 15.448 -2.407 -2.151 1.00 18.58 ? 10 DG B N2 1 ATOM 403 N N3 . DG B 1 10 ? 15.517 -3.921 -4.066 1.00 18.66 ? 10 DG B N3 1 ATOM 404 C C4 . DG B 1 10 ? 15.542 -5.264 -4.336 1.00 24.67 ? 10 DG B C4 1 HETATM 405 CO CO . CO C 2 . ? 6.035 -0.890 1.912 1.00 54.25 ? 11 CO A CO 1 HETATM 406 CO CO . CO D 2 . ? -6.475 -0.516 -2.101 1.00 40.80 ? 11 CO B CO 1 HETATM 407 CO CO . CO E 2 . ? 13.028 -11.999 1.818 1.00 46.60 ? 12 CO B CO 1 HETATM 408 O O . HOH F 3 . ? -13.167 -12.301 -0.762 1.00 23.57 ? 12 HOH A O 1 HETATM 409 O O . HOH F 3 . ? -9.413 -16.094 -7.773 1.00 39.38 ? 13 HOH A O 1 HETATM 410 O O . HOH F 3 . ? -11.726 -18.879 0.791 1.00 27.40 ? 14 HOH A O 1 HETATM 411 O O . HOH F 3 . ? -12.117 -3.710 7.074 1.00 36.76 ? 15 HOH A O 1 HETATM 412 O O . HOH F 3 . ? -13.411 -21.018 -5.968 1.00 25.64 ? 16 HOH A O 1 HETATM 413 O O . HOH F 3 . ? -0.820 0.620 -0.706 1.00 30.17 ? 17 HOH A O 1 HETATM 414 O O . HOH G 3 . ? -6.507 1.761 -1.993 1.00 2.00 ? 13 HOH B O 1 HETATM 415 O O . HOH G 3 . ? 10.969 -19.184 -0.485 1.00 27.26 ? 14 HOH B O 1 HETATM 416 O O . HOH G 3 . ? 15.239 -9.383 -2.235 1.00 20.81 ? 15 HOH B O 1 HETATM 417 O O . HOH G 3 . ? 13.360 -13.890 0.219 1.00 19.20 ? 16 HOH B O 1 HETATM 418 O O . HOH G 3 . ? -6.043 -2.682 -2.712 1.00 27.38 ? 18 HOH B O 1 #